View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20808_low_39 (Length: 258)
Name: NF20808_low_39
Description: NF20808
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20808_low_39 |
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Alignment Details
Target: chr3 (Bit Score: 223; Significance: 1e-123; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 223; E-Value: 1e-123
Query Start/End: Original strand, 16 - 238
Target Start/End: Complemental strand, 31384730 - 31384508
Alignment:
| Q |
16 |
ataacattaaacagtacaagattacagaggtttgcaaaaccagggaagggaagagaaaatccacaatacacatttctaagcttccaagttagcttaccac |
115 |
Q |
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| T |
31384730 |
ataacattaaacagtacaagattacagaggtttgcaaaaccagggaagggaagagaaaatccacaatacacatttctaagcttccaagttagcttaccac |
31384631 |
T |
|
| Q |
116 |
aatatcatcatcatgcaaggaacagaccaataactgaacacttaatgcaaggaacagaccaataactaatcacttaatatatgcagaactagaaagtata |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31384630 |
aatatcatcatcatgcaaggaacagaccaataactgaacacttaatgcaaggaacagaccaataactaatcacttaatatatgcagaactagaaagtata |
31384531 |
T |
|
| Q |
216 |
attattaaataaaaacaacatga |
238 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
31384530 |
attattaaataaaaacaacatga |
31384508 |
T |
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