View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20809_high_36 (Length: 248)
Name: NF20809_high_36
Description: NF20809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20809_high_36 |
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Alignment Details
Target: chr4 (Bit Score: 221; Significance: 1e-122; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 221; E-Value: 1e-122
Query Start/End: Original strand, 16 - 244
Target Start/End: Original strand, 26482349 - 26482577
Alignment:
| Q |
16 |
tattgagttgacaaatcacccaattattaaggcatactattagtatattttggaaaattcctatattagtgaaaattgaagttgtggtccacccagaccc |
115 |
Q |
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| T |
26482349 |
tattgagttgacaaatcacccaattattaaggcatactattagtatattttcgaaaattcctatattagtgaaaattgaagttttggtccacccagaccc |
26482448 |
T |
|
| Q |
116 |
aaaataaaatagaaaaactgaaaggagtggacccattttttgtgctatggaacacgcccacgtggcagtcatatcagtagggcccagagcccacggcctc |
215 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26482449 |
aaaataaaatagaaaaactgaaaggagtggacccattttttgtgctatggaacacgcccacgtggcagtcatatcagtagggcccagagcccacggcctc |
26482548 |
T |
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| Q |
216 |
tgttatggatatatcgattggctctctgc |
244 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
26482549 |
tgttatggatatatcgattggctctctgc |
26482577 |
T |
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