View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20809_high_5 (Length: 512)

Name: NF20809_high_5
Description: NF20809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20809_high_5
NF20809_high_5
[»] chr8 (5 HSPs)
chr8 (16-494)||(6196317-6196795)
chr8 (401-475)||(20762732-20762806)
chr8 (216-305)||(20523656-20523745)
chr8 (339-427)||(7411331-7411418)
chr8 (418-471)||(37080697-37080750)
[»] chr7 (2 HSPs)
chr7 (237-308)||(24118236-24118307)
chr7 (241-308)||(21510349-21510416)
[»] chr5 (5 HSPs)
chr5 (216-308)||(6329072-6329164)
chr5 (239-303)||(31897950-31898014)
chr5 (247-308)||(21256877-21256938)
chr5 (396-475)||(37247645-37247724)
chr5 (401-475)||(6887914-6887988)
[»] chr1 (7 HSPs)
chr1 (176-308)||(32900280-32900412)
chr1 (237-293)||(16424936-16424992)
chr1 (242-303)||(35811890-35811950)
chr1 (391-484)||(35812408-35812501)
chr1 (396-438)||(24909044-24909086)
chr1 (396-438)||(24909136-24909178)
chr1 (237-303)||(26828440-26828505)
[»] chr4 (8 HSPs)
chr4 (396-475)||(21315526-21315605)
chr4 (216-308)||(29866014-29866106)
chr4 (216-308)||(49583251-49583343)
chr4 (327-409)||(4848614-4848696)
chr4 (215-296)||(4848506-4848586)
chr4 (307-420)||(5198998-5199111)
chr4 (396-459)||(46824613-46824676)
chr4 (397-459)||(29866154-29866216)
[»] chr6 (1 HSPs)
chr6 (437-482)||(26329384-26329429)
[»] chr3 (1 HSPs)
chr3 (260-308)||(44652818-44652866)
[»] scaffold0006 (1 HSPs)
scaffold0006 (401-475)||(75594-75668)
[»] chr2 (1 HSPs)
chr2 (397-475)||(37794611-37794689)
[»] scaffold0472 (1 HSPs)
scaffold0472 (385-434)||(11804-11853)


Alignment Details
Target: chr8 (Bit Score: 454; Significance: 0; HSPs: 5)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 454; E-Value: 0
Query Start/End: Original strand, 16 - 494
Target Start/End: Original strand, 6196317 - 6196795
Alignment:
Q  16 accacagaaagaaagnnnnnnntaattaaactaatcatcataaacaagattctaacaaacggttgatttctgcagtgctccttaccgttttttcctgttt 115  Q
    |||||||||||||||       ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  6196317 accacagaaagaaagaaaaaaataattaaactaatcatcataaacaagattctaacaaacggttgatttctgcagtgctccttacggttttttcctgttt 6196416  T
Q  116 taccaaagtgaacaaaaatcatggaaacagccccaacaaaatgtcgtcacgccgcggaaaaacttaatttcccattgtttctaccctatttcgtaattta 215  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6196417 taccaaagtgaacaaaaatcatggaaacagccccaacaaaatgtcgtcacgccgcggaaaaacttaatttcccattgtttctaccctatttcgtaattta 6196516  T
Q  216 aattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaattatgaa 315  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6196517 aattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaattatgaa 6196616  T
Q  316 aggaatgacaattatgaacttacgaagaaacaataagaaattgagtcattaaacattataggatagcacaaatacttttgataagatttgtgcattgttg 415  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6196617 aggaatgacaattatgaacttacgaagaaacaataagaaattgagtcattaaacattataggatagcacaaatacttttgataagatttgtgcattgttg 6196716  T
Q  416 tgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatcacaaaatacataacgctac 494  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6196717 tgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatcacaaaatacataacgctac 6196795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 20762806 - 20762732
Alignment:
Q  401 atttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatc 475  Q
    |||||||||||||| ||||||| ||||||| | |||||||||||  |||| ||| ||||| ||||||||||||||    
T  20762806 atttgtgcattgttctgattaattcacaccgcgacgaccgcaatcagtaacgcaacatccgtaacagccgaaatc 20762732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 216 - 305
Target Start/End: Original strand, 20523656 - 20523745
Alignment:
Q  216 aattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaa 305  Q
    |||||||||||||| || ||||||||||||||| ||||||||  |||  |||||||| ||||||   |||| |||||||||| |||||||    
T  20523656 aattcttttcataattttttgatgaatttgtttattctaaaactcaagctaaccacttataaattggggttctaatgtttttggaagaaa 20523745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 339 - 427
Target Start/End: Complemental strand, 7411418 - 7411331
Alignment:
Q  339 gaagaaacaataagaaattgagtcattaaacattataggatagcacaaatacttttgataagatttgtgcattgttgtgattaactcac 427  Q
    |||||||||||| |||||| ||| |||| |||||||| |||| || ||||| |||| |||||||||||| | ||||||||| |||||||    
T  7411418 gaagaaacaata-gaaattaagttattatacattataagatatcataaataattttaataagatttgtgaaatgttgtgatcaactcac 7411331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 418 - 471
Target Start/End: Complemental strand, 37080750 - 37080697
Alignment:
Q  418 attaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccga 471  Q
    ||||| ||||||| |||||||||||||||||||  ||| |||| ||||||||||    
T  37080750 attaattcacaccgcaacgaccgcaatatgtaacacagtatccataacagccga 37080697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 48; Significance: 3e-18; HSPs: 2)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 237 - 308
Target Start/End: Complemental strand, 24118307 - 24118236
Alignment:
Q  237 atgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaa 308  Q
    |||| ||||||||||||||| ||||||||||||||| ||||||  |||||||||||||||||||||| ||||    
T  24118307 atgactttgtttcttctaaacaccaaattaaccactgataaattcaggttttaatgtttttagaagagacaa 24118236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 21510349 - 21510416
Alignment:
Q  241 atttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaa 308  Q
    ||||||||||||||||||||||||||||||||||||||   |||||||| | |||||| |||| ||||    
T  21510349 atttgtttcttctaaaaaccaaattaaccactaataaactcaggttttactatttttaaaagagacaa 21510416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 2e-16; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 6329164 - 6329072
Alignment:
Q  216 aattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaa 308  Q
    |||||||||||||| || ||  |||||||||||| |||||||||||||||| ||||||||||||  |  ||||||| ||||||||||| ||||    
T  6329164 aattcttttcataattttttagtgaatttgtttcatctaaaaaccaaattagccactaataaattcaaattttaatctttttagaagagacaa 6329072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 239 - 303
Target Start/End: Complemental strand, 31898014 - 31897950
Alignment:
Q  239 gaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaaga 303  Q
    |||||||||||||||||||  || |||||||| ||||||||| || |||||||||||||||||||    
T  31898014 gaatttgtttcttctaaaagtcatattaaccattaataaatccagattttaatgtttttagaaga 31897950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 247 - 308
Target Start/End: Original strand, 21256877 - 21256938
Alignment:
Q  247 ttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaa 308  Q
    |||||||||||||||||||||||||||| || |  | |||| ||||||||||||||| ||||    
T  21256877 ttcttctaaaaaccaaattaaccactaaaaagttcatgtttcaatgtttttagaagagacaa 21256938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 475
Target Start/End: Original strand, 37247645 - 37247724
Alignment:
Q  396 ataagatttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatc 475  Q
    |||| |||||||||||||||||||||| ||||||| | || ||| |||| ||||| ||| ||||| |||||  |||||||    
T  37247645 ataatatttgtgcattgttgtgattaattcacaccgcgacaaccacaatctgtaacgcaacatccgtaacactcgaaatc 37247724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 475
Target Start/End: Complemental strand, 6887988 - 6887914
Alignment:
Q  401 atttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatc 475  Q
    ||||||||||||||||||| || ||||||| | | || ||||||  |||| ||| ||||| ||||||||||||||    
T  6887988 atttgtgcattgttgtgatcaattcacaccgcgaagatcgcaatcagtaaagcaacatccgtaacagccgaaatc 6887914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 45; Significance: 2e-16; HSPs: 7)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 176 - 308
Target Start/End: Complemental strand, 32900412 - 32900280
Alignment:
Q  176 aacttaatttcccattgtttctaccctatttcgtaatttaaattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaat 275  Q
    ||||||||||| |||||||||| |   ||||| ||| |  |||||||| ||||  || || ||||||| ||||||||||| | |||||||||||||||||    
T  32900412 aacttaatttctcattgtttcttcataatttcataactacaattctttacatacttttttaatgaattcgtttcttctaagagccaaattaaccactaat 32900313  T
Q  276 aaatctaggttttaatgtttttagaagaaacaa 308  Q
    |||    ||||||||||||||||||||| ||||    
T  32900312 aaactcgggttttaatgtttttagaagagacaa 32900280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 237 - 293
Target Start/End: Original strand, 16424936 - 16424992
Alignment:
Q  237 atgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgt 293  Q
    ||||||||||||||||||| |||||| |||||||||||||||| || | ||||||||    
T  16424936 atgaatttgtttcttctaagaaccaatttaaccactaataaatttatgctttaatgt 16424992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 242 - 303
Target Start/End: Complemental strand, 35811950 - 35811890
Alignment:
Q  242 tttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaaga 303  Q
    ||||||||||||| ||| ||||| |||||| ||||||| ||||||||||| |||||||||||    
T  35811950 tttgtttcttctataaatcaaatgaaccaccaataaatttaggttttaat-tttttagaaga 35811890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 391 - 484
Target Start/End: Original strand, 35812408 - 35812501
Alignment:
Q  391 ttttgataagatttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatcacaaaatac 484  Q
    |||| ||||||||| | || | |||||||||| |||||  |||| ||||||||| ||||| |||  ||  ||||||||||||||||||||||||    
T  35812408 ttttaataagatttcttcaatattgtgattaaatcacattacaatgaccgcaatttgtaacgcaatattgttaacagccgaaatcacaaaatac 35812501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 24909044 - 24909086
Alignment:
Q  396 ataagatttgtgcattgttgtgattaactcacaccacaacgac 438  Q
    |||| |||||||||||||||||||||| ||||||| |||||||    
T  24909044 ataatatttgtgcattgttgtgattaattcacaccgcaacgac 24909086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 396 - 438
Target Start/End: Original strand, 24909136 - 24909178
Alignment:
Q  396 ataagatttgtgcattgttgtgattaactcacaccacaacgac 438  Q
    |||| |||||||||||||||||||||| ||||||| |||||||    
T  24909136 ataatatttgtgcattgttgtgattaattcacaccgcaacgac 24909178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 237 - 303
Target Start/End: Complemental strand, 26828505 - 26828440
Alignment:
Q  237 atgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaaga 303  Q
    ||||||||||| ||||| |||| |||| |||||||| ||||||  || |||||||||||||||||||    
T  26828505 atgaatttgtt-cttcttaaaatcaaactaaccactgataaattcagattttaatgtttttagaaga 26828440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 44; Significance: 8e-16; HSPs: 8)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 396 - 475
Target Start/End: Complemental strand, 21315605 - 21315526
Alignment:
Q  396 ataagatttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatc 475  Q
    |||| |||||||||||||||||||||| ||||||| | ||||||| ||| ||||||||| ||||| ||||||| ||||||    
T  21315605 ataatatttgtgcattgttgtgattaattcacaccgcgacgaccgtaatctgtaatgcaacatccgtaacagctgaaatc 21315526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 216 - 308
Target Start/End: Complemental strand, 29866106 - 29866014
Alignment:
Q  216 aattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaa 308  Q
    |||||||||||||| ||    ||||||||||||| | ||||||||||||||||||||||  |||  ||||||||||||||| |||||| ||||    
T  29866106 aattcttttcataattttgcaatgaatttgtttcgtttaaaaaccaaattaaccactaactaattcaggttttaatgttttaagaagagacaa 29866014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 216 - 308
Target Start/End: Original strand, 49583251 - 49583343
Alignment:
Q  216 aattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttttagaagaaacaa 308  Q
    |||| ||||||||| ||| | |||||||| ||||||||| ||| ||||||| ||||||||||||  | |||| |||||||| |||||| ||||    
T  49583251 aattattttcataatttagtaatgaatttatttcttctacaaatcaaattagccactaataaattcatgtttcaatgttttaagaagagacaa 49583343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 327 - 409
Target Start/End: Original strand, 4848614 - 4848696
Alignment:
Q  327 ttatgaacttacgaagaaacaataagaaattgagtcattaaacattataggatagcacaaatacttttgataagatttgtgca 409  Q
    ||||||| ||| ||||||||||| ||||||| ||| |||| |||||||| ||||| | ||||| |||| |||| |||||||||    
T  4848614 ttatgaaattatgaagaaacaatgagaaattaagttattatacattatatgatagtataaataattttaataatatttgtgca 4848696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 215 - 296
Target Start/End: Complemental strand, 4848586 - 4848506
Alignment:
Q  215 aaattcttttcataacttattgatgaatttgtttcttctaaaaaccaaattaaccactaataaatctaggttttaatgtttt 296  Q
    ||||||||||||||| ||  | |||| ||| |||||| || ||||||||| |||||||||||||| |||||||||| |||||    
T  4848586 aaattcttttcataattttgtaatgactttttttcttatataaaccaaatcaaccactaataaat-taggttttaacgtttt 4848506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 307 - 420
Target Start/End: Complemental strand, 5199111 - 5198998
Alignment:
Q  307 aattatgaaaggaatgacaattatgaacttacgaagaaacaataagaaattgagtcattaaacattataggatagcacaaatacttttgataagatttgt 406  Q
    |||||||||| |||| | | | ||||| ||| ||||||||||| ||||||| ||| |||| |||||||| ||||  | ||||| |||| |||| ||||||    
T  5199111 aattatgaaaagaattatagtaatgaaattatgaagaaacaatgagaaattaagttattatacattatatgataatataaataattttaataatatttgt 5199012  T
Q  407 gcattgttgtgatt 420  Q
    ||| |||| |||||    
T  5199011 gcaatgttatgatt 5198998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 396 - 459
Target Start/End: Complemental strand, 46824676 - 46824613
Alignment:
Q  396 ataagatttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatc 459  Q
    |||| |||||||||||||||||||||| | ||||| | |||| |||||| ||||||||| ||||    
T  46824676 ataatatttgtgcattgttgtgattaatttacaccgcgacgatcgcaatctgtaatgcaacatc 46824613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 459
Target Start/End: Original strand, 29866154 - 29866216
Alignment:
Q  397 taagatttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatc 459  Q
    ||||||||||||| |||||||||||| ||||||||| || ||| |||| ||||| ||| ||||    
T  29866154 taagatttgtgcaatgttgtgattaattcacaccacgacaaccacaatctgtaacgcaacatc 29866216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 437 - 482
Target Start/End: Original strand, 26329384 - 26329429
Alignment:
Q  437 accgcaatatgtaatgcagcatccttaacagccgaaatcacaaaat 482  Q
    |||||||||||||||||||||||  |||||||||||||| ||||||    
T  26329384 accgcaatatgtaatgcagcatctgtaacagccgaaatcgcaaaat 26329429  T

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Target: chr3 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 260 - 308
Target Start/End: Original strand, 44652818 - 44652866
Alignment:
Q  260 caaattaaccactaataaatctaggttttaatgtttttagaagaaacaa 308  Q
    |||||||||||||||| ||| ||||||||||| ||||||||||| ||||    
T  44652818 caaattaaccactaattaatttaggttttaatatttttagaagagacaa 44652866  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 401 - 475
Target Start/End: Original strand, 75594 - 75668
Alignment:
Q  401 atttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatc 475  Q
    |||||||||||||| ||||||| ||||||| | |||||||||||  |||| ||| ||| | ||| ||||||||||    
T  75594 atttgtgcattgttctgattaattcacaccgcgacgaccgcaatcagtaacgcaacatacgtaatagccgaaatc 75668  T

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Target: chr2 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 397 - 475
Target Start/End: Complemental strand, 37794689 - 37794611
Alignment:
Q  397 taagatttgtgcattgttgtgattaactcacaccacaacgaccgcaatatgtaatgcagcatccttaacagccgaaatc 475  Q
    ||||| ||||||| |||||||||||| ||||||||| || |||||||| ||||  ||| || || |||| |||||||||    
T  37794689 taagagttgtgcaatgttgtgattaattcacaccacgacaaccgcaatctgtatcgcaacacccataacggccgaaatc 37794611  T

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Target: scaffold0472 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0472
Description:

Target: scaffold0472; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 385 - 434
Target Start/End: Complemental strand, 11853 - 11804
Alignment:
Q  385 aaatacttttgataagatttgtgcattgttgtgattaactcacaccacaa 434  Q
    ||||| |||| |||||||||||||| ||||||| |||| |||||||||||    
T  11853 aaataattttaataagatttgtgcaatgttgtggttaattcacaccacaa 11804  T

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