View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20809_low_32 (Length: 281)

Name: NF20809_low_32
Description: NF20809
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20809_low_32
NF20809_low_32
[»] chr3 (51 HSPs)
chr3 (97-269)||(50211773-50211945)
chr3 (1-104)||(50210783-50210886)
chr3 (125-204)||(31403425-31403504)
chr3 (136-210)||(44295604-44295678)
chr3 (129-210)||(44014717-44014798)
chr3 (129-186)||(47132064-47132121)
chr3 (117-210)||(25182909-25182999)
chr3 (153-210)||(21872214-21872271)
chr3 (125-198)||(22667469-22667542)
chr3 (125-198)||(22724108-22724181)
chr3 (68-211)||(36646300-36646444)
chr3 (129-184)||(1810047-1810102)
chr3 (68-198)||(37273142-37273273)
chr3 (136-210)||(2413598-2413672)
chr3 (130-208)||(24158437-24158515)
chr3 (140-202)||(25925810-25925872)
chr3 (131-205)||(41644369-41644443)
chr3 (132-186)||(47584523-47584577)
chr3 (129-174)||(2175804-2175849)
chr3 (129-198)||(2304202-2304271)
chr3 (129-210)||(11253571-11253652)
chr3 (127-160)||(28828910-28828943)
chr3 (129-210)||(30573834-30573914)
chr3 (129-197)||(19679260-19679328)
chr3 (130-210)||(24785332-24785412)
chr3 (140-212)||(45590732-45590804)
chr3 (172-211)||(8007584-8007623)
chr3 (129-188)||(24624280-24624339)
chr3 (129-204)||(24625267-24625342)
chr3 (129-208)||(49465586-49465665)
chr3 (124-210)||(4534294-4534380)
chr3 (141-195)||(11041160-11041214)
chr3 (130-208)||(37795667-37795744)
chr3 (85-170)||(47513678-47513764)
chr3 (136-210)||(50760668-50760742)
chr3 (85-209)||(24281072-24281197)
chr3 (179-212)||(24684739-24684772)
chr3 (133-210)||(32663712-32663789)
chr3 (131-176)||(34707449-34707494)
chr3 (129-210)||(39980800-39980880)
chr3 (165-210)||(40240740-40240785)
chr3 (125-162)||(45535187-45535224)
chr3 (129-210)||(45541641-45541722)
chr3 (129-210)||(49845459-49845540)
chr3 (117-210)||(52323813-52323906)
chr3 (129-197)||(9995935-9996002)
chr3 (129-197)||(10216952-10217019)
chr3 (117-208)||(20173811-20173900)
chr3 (138-210)||(35903086-35903158)
chr3 (129-197)||(41724282-41724350)
chr3 (160-204)||(41848641-41848685)
[»] chr8 (41 HSPs)
chr8 (87-210)||(9700028-9700152)
chr8 (125-210)||(2487927-2488012)
chr8 (117-203)||(7853437-7853523)
chr8 (130-199)||(4511099-4511168)
chr8 (129-210)||(16162830-16162911)
chr8 (128-210)||(6526171-6526253)
chr8 (129-210)||(26479855-26479936)
chr8 (129-210)||(43368619-43368700)
chr8 (125-209)||(4560568-4560652)
chr8 (129-197)||(7918713-7918781)
chr8 (125-208)||(1821895-1821978)
chr8 (125-208)||(1856340-1856423)
chr8 (164-211)||(18331819-18331866)
chr8 (132-210)||(2482936-2483014)
chr8 (129-199)||(35534543-35534612)
chr8 (137-198)||(11376781-11376842)
chr8 (129-210)||(34770938-34771019)
chr8 (166-210)||(35928649-35928693)
chr8 (149-204)||(3634609-3634664)
chr8 (129-212)||(8060739-8060821)
chr8 (148-211)||(14926900-14926963)
chr8 (164-211)||(33553345-33553392)
chr8 (128-175)||(33940087-33940134)
chr8 (131-210)||(34849176-34849255)
chr8 (85-167)||(30918138-30918220)
chr8 (135-197)||(31884872-31884934)
chr8 (164-210)||(32976478-32976524)
chr8 (133-210)||(778463-778540)
chr8 (129-198)||(29417542-29417611)
chr8 (129-198)||(30191072-30191141)
chr8 (125-190)||(39049338-39049403)
chr8 (125-210)||(43045644-43045728)
chr8 (135-208)||(43717855-43717927)
chr8 (137-210)||(44236742-44236815)
chr8 (125-153)||(10114556-10114584)
chr8 (158-218)||(10488562-10488622)
chr8 (135-195)||(24326107-24326167)
chr8 (125-189)||(28763435-28763498)
chr8 (135-187)||(38436040-38436092)
chr8 (125-197)||(41589653-41589724)
chr8 (130-198)||(43504822-43504890)
[»] chr2 (55 HSPs)
chr2 (124-211)||(19978012-19978099)
chr2 (121-210)||(22878160-22878249)
chr2 (130-210)||(31982370-31982450)
chr2 (129-210)||(3973612-3973693)
chr2 (129-210)||(8017504-8017585)
chr2 (133-210)||(13866952-13867029)
chr2 (129-212)||(4350760-4350843)
chr2 (68-210)||(12313092-12313235)
chr2 (129-208)||(28803451-28803530)
chr2 (129-211)||(36677722-36677805)
chr2 (129-210)||(27317450-27317530)
chr2 (129-206)||(39622021-39622098)
chr2 (137-210)||(41170688-41170761)
chr2 (68-199)||(43141879-43142012)
chr2 (132-209)||(43456627-43456704)
chr2 (135-211)||(11513972-11514048)
chr2 (140-187)||(13869050-13869097)
chr2 (135-206)||(17775389-17775460)
chr2 (85-215)||(28677573-28677704)
chr2 (97-198)||(25609833-25609935)
chr2 (137-211)||(30331830-30331903)
chr2 (129-210)||(2964728-2964809)
chr2 (129-210)||(4606996-4607076)
chr2 (141-210)||(6547971-6548040)
chr2 (149-194)||(24098190-24098235)
chr2 (129-210)||(40077430-40077511)
chr2 (68-208)||(40158726-40158867)
chr2 (129-206)||(40776020-40776097)
chr2 (85-204)||(9478324-9478444)
chr2 (129-208)||(24347792-24347872)
chr2 (137-197)||(29430836-29430896)
chr2 (88-215)||(32821837-32821965)
chr2 (122-206)||(33981186-33981270)
chr2 (129-169)||(43808628-43808668)
chr2 (171-210)||(18179061-18179100)
chr2 (167-210)||(30990358-30990401)
chr2 (135-198)||(43530042-43530105)
chr2 (129-211)||(787402-787484)
chr2 (129-215)||(15120253-15120339)
chr2 (125-175)||(32837389-32837439)
chr2 (129-211)||(43811180-43811262)
chr2 (138-167)||(1625980-1626009)
chr2 (153-210)||(3078527-3078584)
chr2 (154-210)||(4326315-4326374)
chr2 (117-210)||(9478015-9478108)
chr2 (129-210)||(9996808-9996889)
chr2 (153-210)||(15370242-15370299)
chr2 (117-198)||(15377824-15377904)
chr2 (125-162)||(19629427-19629464)
chr2 (125-162)||(19826328-19826365)
chr2 (153-210)||(37276838-37276895)
chr2 (130-210)||(38076992-38077072)
chr2 (158-210)||(40759259-40759311)
chr2 (68-151)||(43065428-43065512)
chr2 (129-177)||(44606062-44606110)
[»] chr6 (43 HSPs)
chr6 (85-210)||(2460070-2460196)
chr6 (85-187)||(10031757-10031860)
chr6 (137-210)||(32205932-32206005)
chr6 (130-211)||(35070385-35070466)
chr6 (130-210)||(33089577-33089657)
chr6 (129-208)||(26559160-26559239)
chr6 (153-210)||(4325224-4325281)
chr6 (130-210)||(34538137-34538217)
chr6 (148-211)||(1432228-1432291)
chr6 (68-210)||(32171302-32171445)
chr6 (88-210)||(34403883-34404006)
chr6 (129-199)||(3180999-3181069)
chr6 (129-167)||(20368142-20368180)
chr6 (124-210)||(28005475-28005561)
chr6 (133-210)||(19752725-19752802)
chr6 (141-210)||(30536884-30536953)
chr6 (129-197)||(2455330-2455397)
chr6 (88-199)||(30523965-30524077)
chr6 (135-187)||(34544086-34544138)
chr6 (73-208)||(34939526-34939662)
chr6 (129-176)||(1669751-1669798)
chr6 (125-204)||(8146991-8147070)
chr6 (165-208)||(12111073-12111116)
chr6 (129-176)||(27693392-27693439)
chr6 (125-199)||(8348292-8348366)
chr6 (135-185)||(10353705-10353755)
chr6 (129-198)||(725586-725655)
chr6 (153-210)||(2457035-2457092)
chr6 (129-198)||(4080986-4081055)
chr6 (129-218)||(7945796-7945884)
chr6 (129-162)||(9559505-9559538)
chr6 (129-210)||(22743551-22743631)
chr6 (117-210)||(27924522-27924615)
chr6 (129-205)||(31338046-31338123)
chr6 (141-210)||(33068521-33068590)
chr6 (129-210)||(33737640-33737721)
chr6 (135-211)||(2458880-2458956)
chr6 (138-210)||(7901750-7901822)
chr6 (131-167)||(10645346-10645382)
chr6 (124-156)||(18611139-18611171)
chr6 (160-208)||(24973948-24973996)
chr6 (129-197)||(27857428-27857496)
chr6 (132-176)||(31668430-31668474)
[»] chr4 (51 HSPs)
chr4 (85-210)||(27123271-27123397)
chr4 (73-211)||(56186816-56186958)
chr4 (87-199)||(33534099-33534212)
chr4 (68-196)||(18628486-18628605)
chr4 (88-212)||(6428046-6428171)
chr4 (129-210)||(17822784-17822864)
chr4 (133-210)||(53315400-53315477)
chr4 (129-197)||(4691918-4691986)
chr4 (68-211)||(14011242-14011386)
chr4 (135-219)||(28615411-28615494)
chr4 (131-211)||(32421172-32421252)
chr4 (130-210)||(49940086-49940165)
chr4 (129-204)||(2996643-2996718)
chr4 (136-215)||(9720568-9720647)
chr4 (135-186)||(22471350-22471401)
chr4 (40-115)||(53943586-53943661)
chr4 (152-210)||(18512434-18512492)
chr4 (125-211)||(37575854-37575940)
chr4 (137-198)||(3549486-3549547)
chr4 (143-203)||(21469848-21469909)
chr4 (129-210)||(47399555-47399636)
chr4 (137-210)||(55870261-55870334)
chr4 (129-197)||(4071948-4072016)
chr4 (129-210)||(22662170-22662247)
chr4 (129-210)||(22666649-22666726)
chr4 (73-208)||(29375917-29376052)
chr4 (125-209)||(32831438-32831522)
chr4 (153-197)||(50298609-50298653)
chr4 (135-175)||(50742790-50742830)
chr4 (124-208)||(50746040-50746124)
chr4 (85-207)||(10365796-10365923)
chr4 (129-204)||(24091533-24091608)
chr4 (136-211)||(39178184-39178259)
chr4 (140-207)||(46859999-46860066)
chr4 (129-199)||(27725284-27725354)
chr4 (158-208)||(32420979-32421029)
chr4 (124-190)||(37863893-37863959)
chr4 (128-198)||(49003973-49004042)
chr4 (87-151)||(1137739-1137804)
chr4 (129-210)||(13126495-13126575)
chr4 (153-210)||(17975256-17975313)
chr4 (153-198)||(21157862-21157907)
chr4 (129-206)||(24087406-24087483)
chr4 (135-208)||(24160450-24160523)
chr4 (124-161)||(45214436-45214473)
chr4 (137-198)||(49939882-49939942)
chr4 (129-190)||(51560228-51560289)
chr4 (137-197)||(1554940-1555000)
chr4 (160-204)||(25487482-25487526)
chr4 (135-211)||(27122082-27122158)
chr4 (148-208)||(37636107-37636167)
[»] chr1 (44 HSPs)
chr1 (87-207)||(10199330-10199451)
chr1 (133-209)||(6659754-6659830)
chr1 (130-211)||(50644173-50644253)
chr1 (129-208)||(4757408-4757487)
chr1 (129-208)||(18327067-18327146)
chr1 (135-210)||(32515360-32515435)
chr1 (129-208)||(51929383-51929462)
chr1 (130-199)||(16980874-16980943)
chr1 (153-208)||(9602575-9602630)
chr1 (129-208)||(15581324-15581403)
chr1 (68-210)||(33723301-33723444)
chr1 (166-212)||(6292599-6292645)
chr1 (137-199)||(6557051-6557112)
chr1 (129-199)||(28075774-28075844)
chr1 (132-198)||(31517671-31517737)
chr1 (129-210)||(601110-601191)
chr1 (128-204)||(4200303-4200379)
chr1 (125-197)||(14737658-14737730)
chr1 (129-209)||(24417655-24417735)
chr1 (164-212)||(33975679-33975727)
chr1 (128-176)||(36070250-36070298)
chr1 (164-207)||(2832077-2832120)
chr1 (88-198)||(3110019-3110130)
chr1 (128-199)||(11217944-11218015)
chr1 (129-176)||(43371844-43371891)
chr1 (129-208)||(49282635-49282712)
chr1 (135-177)||(8382417-8382459)
chr1 (83-212)||(10439709-10439839)
chr1 (136-210)||(26866390-26866464)
chr1 (129-175)||(42336685-42336731)
chr1 (114-176)||(49692005-49692067)
chr1 (129-198)||(1662643-1662712)
chr1 (142-211)||(4180651-4180720)
chr1 (129-198)||(28837284-28837352)
chr1 (155-208)||(29793619-29793672)
chr1 (129-210)||(43420328-43420409)
chr1 (92-199)||(5591897-5592004)
chr1 (135-199)||(6279475-6279539)
chr1 (140-208)||(7252541-7252609)
chr1 (85-204)||(27140503-27140623)
chr1 (129-185)||(40485717-40485773)
chr1 (142-190)||(44217454-44217502)
chr1 (137-173)||(49173463-49173499)
chr1 (171-207)||(50725336-50725372)
[»] chr5 (30 HSPs)
chr5 (75-208)||(32849196-32849327)
chr5 (129-205)||(8090006-8090082)
chr5 (143-210)||(10638454-10638521)
chr5 (129-210)||(499650-499731)
chr5 (129-210)||(12459920-12460001)
chr5 (135-211)||(11104981-11105057)
chr5 (129-211)||(5377115-5377197)
chr5 (73-198)||(10125649-10125775)
chr5 (164-210)||(26004916-26004962)
chr5 (137-210)||(42646969-42647041)
chr5 (130-210)||(11297115-11297195)
chr5 (126-210)||(14599291-14599375)
chr5 (164-210)||(25705578-25705624)
chr5 (132-210)||(35135571-35135649)
chr5 (137-210)||(36639600-36639673)
chr5 (134-210)||(25720336-25720412)
chr5 (158-198)||(39257325-39257365)
chr5 (131-190)||(17259289-17259348)
chr5 (137-199)||(37968955-37969017)
chr5 (137-198)||(15015922-15015982)
chr5 (137-198)||(17258814-17258875)
chr5 (125-210)||(35445763-35445847)
chr5 (130-211)||(35960484-35960564)
chr5 (158-211)||(36796625-36796678)
chr5 (129-197)||(11095427-11095495)
chr5 (164-208)||(11615575-11615619)
chr5 (85-208)||(14980535-14980658)
chr5 (129-197)||(26796423-26796490)
chr5 (129-197)||(32172723-32172791)
chr5 (166-210)||(42034167-42034211)
[»] chr7 (38 HSPs)
chr7 (129-198)||(8094376-8094445)
chr7 (129-210)||(23214925-23215006)
chr7 (83-210)||(33894650-33894778)
chr7 (129-199)||(25670516-25670586)
chr7 (129-210)||(4970711-4970791)
chr7 (125-210)||(30748953-30749038)
chr7 (125-205)||(13960648-13960727)
chr7 (142-210)||(30751602-30751670)
chr7 (128-208)||(46091662-46091742)
chr7 (140-207)||(529443-529510)
chr7 (68-210)||(28691755-28691897)
chr7 (130-208)||(8427084-8427162)
chr7 (158-215)||(29363607-29363664)
chr7 (133-198)||(43854972-43855037)
chr7 (134-199)||(44151406-44151471)
chr7 (68-208)||(44615025-44615166)
chr7 (129-197)||(2825168-2825236)
chr7 (135-198)||(753045-753108)
chr7 (137-208)||(3836604-3836675)
chr7 (129-196)||(30496775-30496842)
chr7 (132-210)||(17942144-17942222)
chr7 (165-211)||(17988951-17988997)
chr7 (129-211)||(22387814-22387896)
chr7 (125-167)||(22940017-22940059)
chr7 (171-209)||(25659805-25659843)
chr7 (125-167)||(33678847-33678889)
chr7 (141-215)||(47041953-47042027)
chr7 (166-211)||(1418526-1418571)
chr7 (129-210)||(19302482-19302562)
chr7 (154-207)||(21073232-21073285)
chr7 (132-197)||(24895529-24895594)
chr7 (129-210)||(30535633-30535714)
chr7 (129-210)||(34035988-34036068)
chr7 (129-198)||(46825170-46825239)
chr7 (73-117)||(3968770-3968814)
chr7 (129-197)||(24973980-24974047)
chr7 (135-167)||(27863686-27863718)
chr7 (136-208)||(28727684-28727756)
[»] scaffold0050 (1 HSPs)
scaffold0050 (132-211)||(69742-69821)
[»] scaffold0020 (1 HSPs)
scaffold0020 (135-210)||(159892-159967)


Alignment Details
Target: chr3 (Bit Score: 165; Significance: 3e-88; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 97 - 269
Target Start/End: Original strand, 50211773 - 50211945
Alignment:
Q  97 ggaaataaaatgaaatcaactatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaata 196  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  50211773 ggaaataagatgaaatcaactatggatgtgttataagttgttttcataagttctctcaaacagtcttacaagtgcttatgttagtagataagctaaaata 50211872  T
Q  197 agttaatccaaacaaatccatataaatctatacacatgtcaattgaaataccatgccttacgaaattgagtat 269  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50211873 agttaatccaaacaaatccatataaatctatacacatgtcaattgaaataccatgccttacgaaattgagtat 50211945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 50210783 - 50210886
Alignment:
Q  1 ctcttatatacaagctaattatataaacaaaaataaagttcaactgttttcaaataacctatgggtggtttacataagttaccctggagagcttatggaa 100  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  50210783 ctcttatatacaagctaattatataaacaaaaataaagttcaattgttttcaaataacctatgggtggttttcataagttaccctggagagcttatggaa 50210882  T
Q  101 ataa 104  Q
    ||||    
T  50210883 ataa 50210886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 125 - 204
Target Start/End: Original strand, 31403425 - 31403504
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    ||||||||  |||| |||||||||||| ||||||||||| ||||| |||||||||||||||||||| || ||||| ||||    
T  31403425 tgttataaactgttctcataagttctcccaaatagtcttgcaagtacttatgttagtagataagctcaagtaagtcaatc 31403504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 44295604 - 44295678
Alignment:
Q  136 gttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||||||||||| | ||||||||||||| | ||||||||||| ||| |||| |||| |||||    
T  44295604 gttttcataagttctctcaaatagtatcacaagtgcttatgcttgtagataagctcaaacaagtcaatctaaaca 44295678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 44014798 - 44014717
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||||||| ||||||| ||||| ||||||| ||||| |||||||||| || |||||||  ||||||||||    
T  44014798 ataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaaca 44014717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 186
Target Start/End: Original strand, 47132064 - 47132121
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    |||||||||||||||||||||||||||||||||||||| ||| ||||  |||||||||    
T  47132064 ataagttgttttcataagttctctcaaatagtcttacatgtggttatactagtagata 47132121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 25182999 - 25182909
Alignment:
Q  117 tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| ||| |||||||||||||||||| ||||||||| ||||| |||||| ||||   |||||| |||||| |||||||| | ||||||||    
T  25182999 tatggatatgtcataagttgttttcataagctctctcaaacagtctcacaagttctta---tagtaggtaagctcaaataagtcactccaaaca 25182909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 21872271 - 21872214
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| ||||| |||||||||||||| |||||||||| | |||||||||||||||||||    
T  21872271 caaacagtctcacaagtgcttatgtcagtagataagatcaaataagttaatccaaaca 21872214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 22667469 - 22667542
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||| | ||||| |||||  ||||||||| ||||| |||||||||||||| |||||||||||| |||||||    
T  22667469 tgttatatgctgtttccataaactctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataag 22667542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 198
Target Start/End: Original strand, 22724108 - 22724181
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||| | ||||| |||||  ||||||||| ||||| |||||||||||||| |||||||||||| |||||||    
T  22724108 tgttatatgctgtttccataaactctctcaaacagtctcacaagtgcttatgtcagtagataagctcaaataag 22724181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 211
Target Start/End: Complemental strand, 36646444 - 36646300
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    |||| |||||| || ||| ||||| |||| ||||||| |||||| || || |||||  ||  |||||| |||| |||||| |||| ||||||||||||||    
T  36646444 gttttcataagctatcctagagagtttatagaaataagatgaaaacagcttatggacatgccataagtggtttccataagctctcccaaatagtcttaca 36646345  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||| ||||  | |||||| ||| ||||||||  ||||||||||    
T  36646344 agtgcctatgccaatagatatgcttaaataagtcgatccaaacaa 36646300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 184
Target Start/End: Original strand, 1810047 - 1810102
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtaga 184  Q
    ||||||||||| | |||| ||||||||||||||| ||||||| |||||||||||||    
T  1810047 ataagttgtttccgtaagctctctcaaatagtctcacaagtgattatgttagtaga 1810102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 198
Target Start/End: Original strand, 37273142 - 37273273
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    |||| |||||| || | |||||| |||||||||||||  ||||| ||||| |||||  ||| ||||||||||| |||||| |||| |||| ||||| ||     
T  37273142 gttttcataagctatcttggagaacttatggaaataagttgaaaacaacttatggacatgtcataagttgtttccataagctctcccaaacagtctcacc 37273241  T
Q  167 agtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||| || || ||||| | |||||||    
T  37273242 agtgcttatgctaataaataagttcaaataag 37273273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 136 - 210
Target Start/End: Complemental strand, 2413672 - 2413598
Alignment:
Q  136 gttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| ||||||||| || |||||||||| ||||| || ||||| || | |||||||| ||||||||||    
T  2413672 gttttcataagctctctcaaacagacttacaagtgattatgctaatagatgagttcaaataagtaaatccaaaca 2413598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 208
Target Start/End: Complemental strand, 24158515 - 24158437
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||||| |||||| |||| |||| ||| | |||||| ||||||| |||||||||||| |||||||  ||||||||    
T  24158515 taagttgtttccataagctctcgcaaacagtttcacaagtacttatgtcagtagataagcttaaataagccaatccaaa 24158437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 140 - 202
Target Start/End: Original strand, 25925810 - 25925872
Alignment:
Q  140 tcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaa 202  Q
    ||||||||||||| ||| ||| |||||||||||||||  |||||||||| | |||||||||||    
T  25925810 tcataagttctctaaaacagtgttacaagtgcttatgccagtagataagttcaaataagttaa 25925872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 131 - 205
Target Start/End: Complemental strand, 41644443 - 41644369
Alignment:
Q  131 aagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcc 205  Q
    |||||||||| ||||||||||  ||| ||| |  |||||||||||| ||||||||||||| ||| ||||||||||    
T  41644443 aagttgtttttataagttctcctaaacagtgtctcaagtgcttatgctagtagataagctcaaagaagttaatcc 41644369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 186
Target Start/End: Original strand, 47584523 - 47584577
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    |||| |||||||||| ||||||||||||||| |||||||||||||| | ||||||    
T  47584523 agttcttttcataagctctctcaaatagtctcacaagtgcttatgtcaatagata 47584577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 174
Target Start/End: Complemental strand, 2175849 - 2175804
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgctta 174  Q
    |||||||||||||||||  | |||||||||||||||||||||||||    
T  2175849 ataagttgttttcataaactatctcaaatagtcttacaagtgctta 2175804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 2304271 - 2304202
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||| |||||||| |||||||||||||| | ||||||| ||||| |||||||| || | |||||||    
T  2304271 ataagttgctttcataatttctctcaaatagtttcacaagtgtttatgctagtagatcagttcaaataag 2304202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 11253571 - 11253652
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||| |||| ||||  |||| |||||  |||||||||||| |||||||||| || |||||||| ||| ||||||    
T  11253571 ataagttgtttttataaattctgccaaacagtctctcaagtgcttatgctagtagataatctcaaataagtcaattcaaaca 11253652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 127 - 160
Target Start/End: Complemental strand, 28828943 - 28828910
Alignment:
Q  127 ttataagttgttttcataagttctctcaaatagt 160  Q
    ||||||||||||||||||||||||||||||||||    
T  28828943 ttataagttgttttcataagttctctcaaatagt 28828910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 30573914 - 30573834
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||||||||||||||||| |||| |  || |||||||||||||| ||||||| |||| ||||||||  |||||||||    
T  30573914 ataatttgttttcataagttctcacaaacaaactcacaagtgcttatgtcagtagat-agctcaaataagtccatccaaaca 30573834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 19679328 - 19679260
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||||| |||||||||||||| | | |  |||||||||||| |||||||||| || ||||||    
T  19679328 ataagttgttttcgtaagttctctcaaagattttcgcaagtgcttatgctagtagataaactcaaataa 19679260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 24785332 - 24785412
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| ||||||  |||||||||  ||| ||| | |||||||||||||  | |||||||||||||||||||| |||||||||    
T  24785332 taagatgtttttgtaagttctccgaaacagtgtcacaagtgcttatggcaatagataagctaaaataagttgatccaaaca 24785412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 212
Target Start/End: Original strand, 45590732 - 45590804
Alignment:
Q  140 tcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaa 212  Q
    ||||||| |||| |||| ||||| ||||||||||||| ||||||||||| | ||| |||| ||| ||||||||    
T  45590732 tcataagctctcccaaacagtctcacaagtgcttatgctagtagataagttcaaaaaagtcaattcaaacaaa 45590804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 172 - 211
Target Start/End: Complemental strand, 8007623 - 8007584
Alignment:
Q  172 ttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||| ||||||||||||||||||||| |||||||||||    
T  8007623 ttatgtaagtagataagctaaaataagtcaatccaaacaa 8007584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 188
Target Start/End: Original strand, 24624280 - 24624339
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataag 188  Q
    ||||| |||||||||||| |||  |||| ||||||||||||||| |||| ||||||||||    
T  24624280 ataagctgttttcataagctcttccaaacagtcttacaagtgctaatgtgagtagataag 24624339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 204
Target Start/End: Complemental strand, 24625342 - 24625267
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    |||| ||||||| ||||| ||||||||  || ||||||||||||||||  |||| ||||||| ||| |||||||||    
T  24625342 ataaattgttttaataagctctctcaatcagccttacaagtgcttatgccagtaaataagctcaaacaagttaatc 24625267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 49465665 - 49465586
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||| |||||||||||||||||  ||| | | | ||||||||||||| ||||| |||| || |||||||| ||||||||    
T  49465665 ataagctgttttcataagttctccgaaacaatatcacaagtgcttatggtagtaaataaactgaaataagtcaatccaaa 49465586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 4534380 - 4534294
Alignment:
Q  124 gtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||  ||||  |||  |||||||| ||||||| |||||||| | |||||||||| |||||| | |||| |||||    
T  4534380 gtgttataagttgtttctataacctctaccaaatagttttacaagggcttatgtgaatagataagctcaaataaatcaatcgaaaca 4534294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 11041214 - 11041160
Alignment:
Q  141 cataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaat 195  Q
    |||||| ||||||||| ||||  |||||||||||| |||||||||||||| ||||    
T  11041214 cataagctctctcaaacagtcccacaagtgcttatcttagtagataagctcaaat 11041160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 37795667 - 37795744
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||| |||||| ||  |||| |||||||||||  ||||||| ||| |||||||| |||||||| ||||||||    
T  37795667 taagttgttttaataagtccttccaaacagtcttacaag-acttatgtcagtggataagcttaaataagtcaatccaaa 37795744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 170
Target Start/End: Original strand, 47513678 - 47513764
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaac-tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtg 170  Q
    ||||||||||||| ||||||| ||||| |||| |||| | |||| |||| |||||||||||||| ||| | || ||||| |||||||    
T  47513678 tggagagcttatgaaaataaattgaaaacaacttatgaacgtgtcataacttgttttcataagtcctcccgaacagtctcacaagtg 47513764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 50760668 - 50760742
Alignment:
Q  136 gttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||||||   || | ||||||||||||| | |||||| |||| |||||||| |||| |||||    
T  50760668 gttttcataagttctctcaagcggtgtcacaagtgcttatgcttgtagatgagctcaaataagtcaatctaaaca 50760742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 85 - 209
Target Start/End: Original strand, 24281072 - 24281197
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    ||||||||||||| || |||  ||||| ||||| |||||  | | |||||||||||||||||| ||||||||| | ||  ||||||||||||   |||||    
T  24281072 tggagagcttatgaaagtaagttgaaaacaacttatggagatatcataagttgttttcataagctctctcaaacaatcacacaagtgcttataccagtag 24281171  T
Q  184 ataagctaaaataagttaatccaaac 209  Q
    |||  || |||||||| |||| ||||    
T  24281172 atagactcaaataagtcaatctaaac 24281197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 179 - 212
Target Start/End: Complemental strand, 24684772 - 24684739
Alignment:
Q  179 agtagataagctaaaataagttaatccaaacaaa 212  Q
    |||||||||||| |||||||||||||||||||||    
T  24684772 agtagataagctcaaataagttaatccaaacaaa 24684739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 32663712 - 32663789
Alignment:
Q  133 gttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| |||||  ||||||||||||||| |||||||  | |||  ||||||||||| |||||||  ||||||||||    
T  32663712 gttgtttccataaactctctcaaatagtctcacaagtgtatttgtcggtagataagctcaaataagccaatccaaaca 32663789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 131 - 176
Target Start/End: Complemental strand, 34707494 - 34707449
Alignment:
Q  131 aagttgttttcataagttctctcaaatagtcttacaagtgcttatg 176  Q
    |||||||||||| ||||||||||||| ||||| ||||| |||||||    
T  34707494 aagttgttttcaaaagttctctcaaacagtctcacaagcgcttatg 34707449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 39980800 - 39980880
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||||||||||| ||| ||||| ||||   |||||| ||||||||||||| ||| |||  ||||||||||    
T  39980800 ataagctgttttcataagttctcttaaacagtctcacaa-aacttatgctagtagataagctcaaacaagccaatccaaaca 39980880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 165 - 210
Target Start/End: Complemental strand, 40240785 - 40240740
Alignment:
Q  165 caagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||| ||||| ||||| ||||||| |||||||||||||||||||    
T  40240785 caagtgtttatgctagtatataagctcaaataagttaatccaaaca 40240740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Complemental strand, 45535224 - 45535187
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtct 162  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  45535224 tgttataagttgtttccataagttctcccaaatagtct 45535187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 45541641 - 45541722
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| ||||||||||||||||   ||| ||||||||||||| ||||   | || ||||||| |||||||| ||||||||||    
T  45541641 ataagctgttttcataagttcttctaaacagtcttacaagtgtttataccattaaataagctcaaataagtcaatccaaaca 45541722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 49845540 - 49845459
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| |||||| |||| |||||||| | | ||||  ||||  ||||| ||||||| |||||||| ||||||||||    
T  49845540 ataagttgtttccataagctctcccaaatagtttcataagtttttatactagtatataagctcaaataagtcaatccaaaca 49845459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 52323906 - 52323813
Alignment:
Q  117 tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||| |||| |||| || |||  ||||| |||| |||| |||||| ||||||||||||||||||||| | || || ||||| |||| |||||    
T  52323906 tatggacgtgtcataaattatttcaataagctctcacaaacagtcttgcaagtgcttatgttagtagatcaactcaattaagtcaatctaaaca 52323813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 9995935 - 9996002
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||| | ||||||||| |||||| | ||| ||||| ||||||||||| ||||||| ||||||    
T  9995935 ataagttgtttccttaagttctc-caaataatgttagaagtgtttatgttagtacataagctcaaataa 9996002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 10216952 - 10217019
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||| | ||||||||| |||||| | ||| ||||| ||||||||||| ||||||| ||||||    
T  10216952 ataagttgtttccttaagttctc-caaataatgttagaagtgtttatgttagtacataagctcaaataa 10217019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 117 - 208
Target Start/End: Complemental strand, 20173900 - 20173811
Alignment:
Q  117 tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||| || ||||||||||| |||| ||||||  |||  |||| |||||||||||| | | |||||| ||| |||||||| ||||||||    
T  20173900 tatggatgagtcataagttgtttccataggttctc--aaactgtctcacaagtgcttatttcaatagatacgctcaaataagtcaatccaaa 20173811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 35903158 - 35903086
Alignment:
Q  138 tttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||| ||| ||| | | |||||||||||||||| ||| | || |||||||| ||| ||||||    
T  35903158 tttcataagttctctgaaacagtgtcataagtgcttatgttagttgatgaactcaaataagtcaattcaaaca 35903086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 41724282 - 41724350
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||| |||||||| || ||||  |||| |||||| ||||||| |||||||||| | ||||||    
T  41724282 ataagttgtttccataagttttcacaaactgtctgacaagtacttatgtcagtagataagttcaaataa 41724350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 41848685 - 41848641
Alignment:
Q  160 tcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    ||||||||||| |||||||||||||||| || |||||||| ||||    
T  41848685 tcttacaagtgtttatgttagtagataaactcaaataagtcaatc 41848641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 53; Significance: 2e-21; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 87 - 210
Target Start/End: Original strand, 9700028 - 9700152
Alignment:
Q  87 gagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagat 185  Q
    ||||||||||| ||||||  ||||| || || |||||  ||| |||| ||| ||||| ||| ||||||||||||||| ||||||| ||||| ||||||||    
T  9700028 gagagcttatgaaaataaggtgaaaacagcttatggacatgtcataaattgatttcacaagctctctcaaatagtctcacaagtgtttatgctagtagat 9700127  T
Q  186 aagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||||||||||||    
T  9700128 aagctcaaataagttaatccaaaca 9700152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 2488012 - 2487927
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||||||||||||| |||| ||||| |||||||||||||| ||||||| | || |||||||  ||||||||||    
T  2488012 tgttataagttgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagatgaactcaaataagccaatccaaaca 2487927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 117 - 203
Target Start/End: Original strand, 7853437 - 7853523
Alignment:
Q  117 tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaat 203  Q
    ||||||| ||| || ||||||||||| |||||||| |||||||||| || ||||||||||  |||||| ||| ||||||||||||||    
T  7853437 tatggatatgtcattagttgttttcacaagttctcccaaatagtctcactagtgcttatgccagtagaaaaggtaaaataagttaat 7853523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 4511099 - 4511168
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    ||||||||||||||||||||| || |||||||| ||||||||||||   |||||||||||||||| ||||    
T  4511099 taagttgttttcataagttctttcgaatagtctcacaagtgcttataccagtagataagctaaaacaagt 4511168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 16162830 - 16162911
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||||||| ||||||| ||||| ||||||| ||||| |||||||||| || |||||||  ||||||||||    
T  16162830 ataagctgttttcataagttttctcaaacagtctcacaagtgtttatgctagtagataaactcaaataagccaatccaaaca 16162911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 128 - 210
Target Start/End: Complemental strand, 6526253 - 6526171
Alignment:
Q  128 tataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||| |||||||||||||| | ||| ||||| |||||||  |||||||| |||  ||||||| ||||||||||    
T  6526253 tataagttgttttcctaagttctctcaaacaatctcacaagggcttatgccagtagataggctcgaataagtcaatccaaaca 6526171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 26479855 - 26479936
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| |||||| |||| |||||||| | |||||| ||| ||| | |||||||||| |||||||| ||||||||||    
T  26479855 ataagttgtttccataagctctcgcaaatagtttcacaagtccttgtgtcaatagataagcttaaataagtcaatccaaaca 26479936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 43368700 - 43368619
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||||| | |  |||  ||||| |||| |||||||||||||||||||| | |||||||| ||||||||||    
T  43368700 ataagttgttttcataagctgttacaaccagtctcacaaatgcttatgttagtagataagatcaaataagtcaatccaaaca 43368619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 209
Target Start/End: Original strand, 4560568 - 4560652
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaac 209  Q
    ||||||||||| ||| ||||||||||  |||| |  || |||||||||||||| | |||||||||| |||||||| |||||||||    
T  4560568 tgttataagttatttccataagttcttccaaacaacctcacaagtgcttatgtcaatagataagctcaaataagtcaatccaaac 4560652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 7918781 - 7918713
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    |||||||||||||||||| |||| |||| ||||| ||||||| ||||| ||||||||||| | ||||||    
T  7918781 ataagttgttttcataagctctcccaaacagtctcacaagtgtttatgctagtagataagtttaaataa 7918713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 1821895 - 1821978
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||| ||||||  |||  |||||| |||||||| ||| ||||    
T  1821895 tgttataagatgttatcataagttcttccaaatagtcttacaagtgtttatgtcggtatctaagctcaaataagtcaattcaaa 1821978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 125 - 208
Target Start/End: Original strand, 1856340 - 1856423
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||| |||| |||||||||||  |||||||||||||||||| ||||||  |||  |||||| |||||||| ||| ||||    
T  1856340 tgttataagatgttatcataagttcttccaaatagtcttacaagtgtttatgtcggtatctaagctcaaataagtcaattcaaa 1856423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 18331819 - 18331866
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||||||||||||||||||| | |||||||| |||||||||||    
T  18331819 acaagtgcttatgttagtagataagatcaaataagtcaatccaaacaa 18331866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 2482936 - 2483014
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||| ||||||||| |||| ||||| ||||| ||||||||  || ||||||||||| ||| ||||| ||||||    
T  2482936 agttgttttcttaagttctcccaaacagtctcacaagggcttatgtctgtggataagctaaattaaattaattcaaaca 2483014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 35534612 - 35534543
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    ||||| |||||||| ||||||||||||| ||||| ||||   |||||||||||||||||||| ||||||||    
T  35534612 ataagctgttttcacaagttctctcaaacagtctcacaaaa-cttatgttagtagataagctcaaataagt 35534543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 11376781 - 11376842
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||||||||| |||||||||| |||||  ||||| | |||||||||||| |||||||    
T  11376781 ttttcataagttctcccaaatagtctcacaagaacttatatcagtagataagctcaaataag 11376842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 34770938 - 34771019
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||| | ||||||||| ||| | ||||||||||||| ||| |||||| || |||||||| || |||||||    
T  34770938 ataagctgttttcataggatctctcaaacagtttcacaagtgcttatgctagcagataaactcaaataagtcaaaccaaaca 34771019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 166 - 210
Target Start/End: Complemental strand, 35928693 - 35928649
Alignment:
Q  166 aagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||| ||||||||||||||||||||  ||||||||||    
T  35928693 aagtgcttatgtcagtagataagctaaaataagacaatccaaaca 35928649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 149 - 204
Target Start/End: Complemental strand, 3634664 - 3634609
Alignment:
Q  149 ctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    |||||||| |||||||||||||| ||||| || ||||||||| |||||||| ||||    
T  3634664 ctctcaaacagtcttacaagtgcatatgtcagcagataagctcaaataagtcaatc 3634609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 8060739 - 8060821
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaa 212  Q
    |||| ||||||||||||| ||||||||| ||| ||  ||||| |||||| | |||||| ||| |||||||| ||||||||||||    
T  8060739 ataatttgttttcataagctctctcaaacagt-ttcgaagtgtttatgtcaatagatatgctcaaataagtcaatccaaacaaa 8060821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 148 - 211
Target Start/End: Complemental strand, 14926963 - 14926900
Alignment:
Q  148 tctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||| ||||| |||||||||||||  |||| ||||| | |||||||| |||||||||||    
T  14926963 tctctcaaacagtctcacaagtgcttatgccagtaaataagttcaaataagtcaatccaaacaa 14926900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 211
Target Start/End: Original strand, 33553345 - 33553392
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||||||  |||||||||| ||||||| ||||||||||||    
T  33553345 acaagtgcttatgttgatagataagctcaaataagctaatccaaacaa 33553392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 175
Target Start/End: Original strand, 33940087 - 33940134
Alignment:
Q  128 tataagttgttttcataagttctctcaaatagtcttacaagtgcttat 175  Q
    |||||| |||||||||||| |||||||||| |||| ||||||||||||    
T  33940087 tataagctgttttcataagctctctcaaattgtctcacaagtgcttat 33940134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 34849176 - 34849255
Alignment:
Q  131 aagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||| ||||||| |||| ||||| | |||| ||||||  ||||| |||||| ||||||| |||||| ||||    
T  34849176 aagttgttttcattagttctcccaaacagtctcaaaagtacttatgccagtagctaagctcaaataagctaatccgaaca 34849255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 85 - 167
Target Start/End: Original strand, 30918138 - 30918220
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaactatggatgtgttataagttgttttcataagttctctcaaatagtcttacaa 167  Q
    ||||||||||||||||||||  ||||| |||||   ||  ||| | |||||||||||||||| ||||||||| ||||| ||||    
T  30918138 tggagagcttatggaaataagctgaaaacaacttatgaaatgtcacaagttgttttcataagctctctcaaacagtctcacaa 30918220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 197
Target Start/End: Complemental strand, 31884934 - 31884872
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    |||||| ||||||| || |||| | ||| ||||||||||||| ||||||||||||| ||||||    
T  31884934 tgtttttataagttttcccaaacactctcacaagtgcttatgctagtagataagctcaaataa 31884872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 210
Target Start/End: Original strand, 32976478 - 32976524
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||| |||||||||||| |||||||  ||||||||||    
T  32976478 acaagtgcttatgtcagtagataagctcaaataagggaatccaaaca 32976524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 778463 - 778540
Alignment:
Q  133 gttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||||  |||| ||||| |||||||||||| | |||| |||||   |||||||| || |||||||    
T  778463 gttgttttcataagttcttgcaaacagtctcacaagtgcttatttcagtaaataagtacaaataagtcaaaccaaaca 778540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 29417611 - 29417542
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||||||| |  |||||||||| || || ||||||| ||||||  || ||||||||||||||||    
T  29417611 ataagttgttttcacactttctctcaaacagcctcacaagtgtttatgtcggtcgataagctaaaataag 29417542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 30191141 - 30191072
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||||| |||||| |||| |||| ||||| |||||||||||||  | ||||||| || |||||||    
T  30191141 ataagttgtttccataagctctcccaaacagtctaacaagtgcttatgccaatagataaactcaaataag 30191072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 190
Target Start/End: Original strand, 39049338 - 39049403
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagct 190  Q
    |||||||||||||||||||||| | || |||| | ||| |||| || ||||| |||||||||||||    
T  39049338 tgttataagttgttttcataagctttcacaaacaatctcacaaatgtttatgctagtagataagct 39049403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 43045728 - 43045644
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||| |||||||||||| ||||  ||| ||||| |||| | |||||| ||||||||||||| |||||||  ||||||||||    
T  43045728 tgttgtaagctgttttcataagatctccaaaacagtctcacaaat-cttatgctagtagataagcttaaataagccaatccaaaca 43045644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 43717927 - 43717855
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||||||||| |||||||||| ||||   ||||||| | |||||||||| |||||||  ||||||||    
T  43717927 tgttttcataagttctcccaaatagtctcacaa-aacttatgtcaatagataagctcaaataagccaatccaaa 43717855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 44236815 - 44236742
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||  ||||| | || ||||| |||||||||||||  ||||||||| || ||||||| |||||||||||    
T  44236815 ttttcatagattctcccgaacagtctcacaagtgcttatgccagtagataaactcaaataaggtaatccaaaca 44236742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 153
Target Start/End: Original strand, 10114556 - 10114584
Alignment:
Q  125 tgttataagttgttttcataagttctctc 153  Q
    |||||||||||||||||||||||||||||    
T  10114556 tgttataagttgttttcataagttctctc 10114584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 218
Target Start/End: Original strand, 10488562 - 10488622
Alignment:
Q  158 agtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaatccata 218  Q
    ||||| ||| ||| |||||||||| |||||||| |||||||  |||||||||||| |||||    
T  10488562 agtctcacatgtgtttatgttagttgataagctcaaataagccaatccaaacaaacccata 10488622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 195
Target Start/End: Original strand, 24326107 - 24326167
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaat 195  Q
    ||||| |||||| |||| |||| ||||| |||||||||||||  |||||||||||| ||||    
T  24326107 tgtttccataagctctcccaaacagtctcacaagtgcttatgccagtagataagctcaaat 24326167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 189
Target Start/End: Original strand, 28763435 - 28763498
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagc 189  Q
    ||||||||| ||||||||||||||||| |||| ||||| ||||   ||||||||| |||||||||    
T  28763435 tgttataagctgttttcataagttctcccaaacagtctcacaa-aacttatgttactagataagc 28763498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 38436092 - 38436040
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataa 187  Q
    ||||||||||||||| ||| |||| || ||||||||||||||  |||||||||    
T  38436092 tgttttcataagttcactcgaataatcatacaagtgcttatgccagtagataa 38436040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 125 - 197
Target Start/End: Original strand, 41589653 - 41589724
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    |||||||||||||||||||||||||||  ||| ||||| | ||  |||||||| |||||| ||||| ||||||    
T  41589653 tgttataagttgttttcataagttctccaaaacagtctca-aaaagcttatgtcagtagacaagctcaaataa 41589724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 198
Target Start/End: Original strand, 43504822 - 43504890
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||||||| |||||||  ||| ||||  ||||||||||| |  |||||||||||| |||||||    
T  43504822 taagttgttttcatcagttctccgaaacagtcacacaagtgcttaagccagtagataagcttaaataag 43504890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 52; Significance: 7e-21; HSPs: 55)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 124 - 211
Target Start/End: Original strand, 19978012 - 19978099
Alignment:
Q  124 gtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||||||||||  ||||||||||||||| |||||  ||||||||||| ||| ||||||| ||||||||||| |||||||||||    
T  19978012 gtgttataagttgtttctataagttctctcaaacagtctcgcaagtgcttattttaatagataaactaaaataagtgaatccaaacaa 19978099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 121 - 210
Target Start/End: Original strand, 22878160 - 22878249
Alignment:
Q  121 gatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| |||| |||||| |||||| |||| |||| ||||| |||||||||||||| ||| |||||||| |||||||| ||||||||||    
T  22878160 gatgtgtcataatttgtttccataaggtctcccaaacagtctcacaagtgcttatgtcagtggataagctcaaataagtcaatccaaaca 22878249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 31982370 - 31982450
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| ||||||||||||||||| |||||||| | ||| |||||||||||||||| |||||| |||||||| || |||||||    
T  31982370 taagctgttttcataagttctcccaaatagtgtcacaggtgcttatgttagtaggtaagcttaaataagtcaacccaaaca 31982450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 3973612 - 3973693
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| |||| | ||||||||| ||||||| |||||||||| | ||| |||||||| |||||||| ||||||||||    
T  3973612 ataagttgtttccatatgctctctcaaacagtcttataagtgcttatatcagtggataagctcaaataagtgaatccaaaca 3973693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 8017504 - 8017585
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| ||||||||||||||||| |||||| ||  |||||||||||||| | ||||||| || |||||||| ||||||||||    
T  8017504 ataagctgttttcataagttctcccaaataatcgcacaagtgcttatgtcaatagataacctcaaataagtcaatccaaaca 8017585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 13866952 - 13867029
Alignment:
Q  133 gttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||| |||||||||||||| ||||| ||||||| |||||  |||||||||||| ||||| || ||||||||||    
T  13866952 gttgttttcttaagttctctcaaacagtctcacaagtgtttatggcagtagataagctcaaataggtcaatccaaaca 13867029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 212
Target Start/End: Original strand, 4350760 - 4350843
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaa 212  Q
    ||||| |||||||||||||||||||||| | |||   |||||||||||| |||||| ||||| |||||||  ||||||||||||    
T  4350760 ataagctgttttcataagttctctcaaacaatctcttaagtgcttatgtcagtagagaagctcaaataagccaatccaaacaaa 4350843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 12313235 - 12313092
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    ||||||||||| || | ||||||||||||| ||||||  ||||||||||| ||| |  ||  ||||| ||||||||||| ||||| |||| | ||| |||    
T  12313235 gtttacataagctatcttggagagcttatgaaaataaggtgaaatcaacttatgaacatggcataagctgttttcataaattctcccaaacaatctcaca 12313136  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||| |||| | |||| | ||||||| |||| ||||||    
T  12313135 agtgcttatgctagtgggtaagatcaaataagctaatacaaaca 12313092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 28803530 - 28803451
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||| |||| ||||||||||| ||||| ||| |||||||||   ||||||||||| |||||||| ||||||||    
T  28803530 ataagttgtttccatatgttctctcaaacagtctcacatgtgcttatgccggtagataagctcaaataagtcaatccaaa 28803451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 36677722 - 36677805
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgt-tagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||| |||||||||||| |||||  |||||||| ||||||||||||||  | ||||||| || ||||||||||||||||||||    
T  36677722 ataagctgttttcataagctctcttgaatagtctcacaagtgcttatgtcaaatagataaactcaaataagttaatccaaacaa 36677805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 27317450 - 27317530
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||||||||||||||| ||||| | ||   |||||||  ||||||||||| |||||||| ||||||||||    
T  27317450 ataagttgttttcataagttctctcaaacagtctcataa-aacttatgtcggtagataagctcaaataagtcaatccaaaca 27317530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 39622021 - 39622098
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcca 206  Q
    |||||||||||||||||||||||||||| ||| |  |||||||||||   |||||||||| | |||||||| ||||||    
T  39622021 ataagttgttttcataagttctctcaaacagtgtcgcaagtgcttatacaagtagataagttcaaataagtaaatcca 39622098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 41170688 - 41170761
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||| |  |||||||||| ||||||| |||||||||||||||| || |||||||  ||||||||||    
T  41170688 ttttcataagttattccaaatagtctcacaagtgtttatgttagtagataaactcaaataagccaatccaaaca 41170761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 68 - 199
Target Start/End: Original strand, 43141879 - 43142012
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttc-ataagttctctcaaatagtcttac 165  Q
    |||| |||||| || |||| |||| ||||||||||||||||||| ||||| ||||   ||| ||||||||||| | |||||  || |||||  || | ||    
T  43141879 gttttcataagctatcctgaagagtttatggaaataaaatgaaaacaacttatgggcatgtcataagttgtttcccataagcgctgtcaaactgtttcac 43141978  T
Q  166 aagtgcttatgttagtagataagctaaaataagt 199  Q
    || |||||||||||||||||||||| ||||||||    
T  43141979 aattgcttatgttagtagataagctcaaataagt 43142012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 132 - 209
Target Start/End: Complemental strand, 43456704 - 43456627
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaac 209  Q
    ||||||||||| ||| ||| ||||| ||||||||||||| |||||| |||| ||||| | |||||||| |||||||||    
T  43456704 agttgttttcacaagctctttcaaacagtcttacaagtgtttatgtgagtaaataagttcaaataagtaaatccaaac 43456627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 11513972 - 11514048
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||| ||||| ||| ||||| ||||||||||||| |||||||||| || ||||||   |||||||||||    
T  11513972 tgttttcataagctctctaaaacagtctcacaagtgcttatgctagtagataatctcaaataaaccaatccaaacaa 11514048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 187
Target Start/End: Complemental strand, 13869097 - 13869050
Alignment:
Q  140 tcataagttctctcaaatagtcttacaagtgcttatgttagtagataa 187  Q
    ||||||||||||||||||||||| | |||||||||||| |||||||||    
T  13869097 tcataagttctctcaaatagtctcataagtgcttatgtcagtagataa 13869050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 206
Target Start/End: Complemental strand, 17775460 - 17775389
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcca 206  Q
    |||||||||||   |||||||| ||||||| ||| |||||||| |||||||| ||| |||||||||||||||    
T  17775460 tgttttcataaaccctctcaaacagtcttaaaagagcttatgtcagtagatatgctcaaataagttaatcca 17775389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 85 - 215
Target Start/End: Complemental strand, 28677704 - 28677573
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    ||||||||||||||||||||   |||| ||||| ||| |  ||| ||||| ||||||||||||||||| |||| |||||||  ||| ||||||  ||||     
T  28677704 tggagagcttatggaaataagccgaaaacaacttatgaaaatgtcataagctgttttcataagttctcccaaacagtcttagcagtacttatgcaagtaa 28677605  T
Q  184 ataagctaaaataagttaatccaaacaaatcc 215  Q
    ||||||| ||| || | |||||||||| ||||    
T  28677604 ataagctcaaaaaaatcaatccaaacagatcc 28677573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 97 - 198
Target Start/End: Original strand, 25609833 - 25609935
Alignment:
Q  97 ggaaataaaatgaaatcaac-tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaat 195  Q
    ||||| ||| ||||| |||| ||||||| ||| ||||||||||| |||||| | |  |||  ||||| |||||| |||||||||||||||||||| ||||    
T  25609833 ggaaagaaattgaaaacaacatatggatttgtcataagttgtttccataagctattccaagcagtctcacaagttcttatgttagtagataagctcaaat 25609932  T
Q  196 aag 198  Q
    |||    
T  25609933 aag 25609935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 211
Target Start/End: Original strand, 30331830 - 30331903
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||||||||| |||| ||||| ||||   ||||||| |||||||||||| |||||||| |||||||||||    
T  30331830 ttttcataagttctcccaaacagtctcacaaaa-cttatgtcagtagataagctgaaataagtcaatccaaacaa 30331903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 2964809 - 2964728
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| ||||||||||||||| |||||| | |||  |||||| |||||   ||||||||| | |||||||||||||||||||    
T  2964809 ataagctgttttcataagttcactcaaacattctcgcaagtgtttatgccggtagataagttcaaataagttaatccaaaca 2964728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 4606996 - 4607076
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||| |||||||| |||||||||| ||||   ||||| || ||||||||||| |||||||  ||||||||||    
T  4606996 ataagttgttttcacaagttctcccaaatagtctcacaa-aacttatattggtagataagctcaaataagccaatccaaaca 4607076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 210
Target Start/End: Original strand, 6547971 - 6548040
Alignment:
Q  141 cataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||| || |||||| ||||| |||||| |||||| |||||||||||||  ||||||| ||||||||||    
T  6547971 cataagctccctcaaacagtctcacaagttcttatgctagtagataagcttgaataagtcaatccaaaca 6548040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 149 - 194
Target Start/End: Original strand, 24098190 - 24098235
Alignment:
Q  149 ctctcaaatagtcttacaagtgcttatgttagtagataagctaaaa 194  Q
    |||||||||||| ||||||||||||||| || ||||||||||||||    
T  24098190 ctctcaaatagttttacaagtgcttatgctactagataagctaaaa 24098235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 40077511 - 40077430
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||   | ||||||| ||||||| |||||||||||| |||| ||||||| | |||||| ||| ||||||    
T  40077511 ataagttgttttcatagtctttctcaaagagtcttagaagtgcttatgtcagtacataagctcagataagtcaattcaaaca 40077430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 208
Target Start/End: Original strand, 40158726 - 40158867
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    |||| |||||||||  |||||||||||||| || |||  ||||| ||||| ||  |  ||| ||||| ||||||||||||||| | |||  ||||| |||    
T  40158726 gttttcataagttattctggagagcttatgtaattaagctgaaaacaacttataaacatgtcataagctgttttcataagttcccccaatcagtctcaca 40158825  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||| ||||||| |||||||| ||| |||||||  ||||||||    
T  40158826 agttcttatgtcagtagatatgctcaaataagccaatccaaa 40158867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 206
Target Start/End: Complemental strand, 40776097 - 40776020
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcca 206  Q
    ||||| ||||||||||||||||  |||| ||  ||| |||||||||||||||||||||| || || ||||| ||||||    
T  40776097 ataagctgttttcataagttcttccaaacaggtttataagtgcttatgttagtagataaactcaagtaagtcaatcca 40776020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 9478324 - 9478444
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    ||||||| | |||||| ||| |||||| || || |||||  ||| ||||||||||| |||||  ||||||||| ||||  |||||| |||||||| ||||    
T  9478324 tggagagttgatggaagtaagatgaaaacagcttatggacatgtaataagttgtttgcataaactctctcaaacagtcacacaagtacttatgttggtag 9478423  T
Q  184 ataagctaaaataagttaatc 204  Q
    ||||| | |||||||| ||||    
T  9478424 ataagttcaaataagtcaatc 9478444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 24347792 - 24347872
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagct-aaaataagttaatccaaa 208  Q
    |||||||| ||||||||||||||| ||||||||| |||||| ||||||  |||||| | ||| ||||||||  ||||||||    
T  24347792 ataagttgctttcataagttctctgaaatagtctcacaagtacttatgcgagtagaaaggctcaaaataagccaatccaaa 24347872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 137 - 197
Target Start/End: Original strand, 29430836 - 29430896
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||||||  |||||||||  ||||||| |||||| |||||||||||| ||||||    
T  29430836 ttttcataagttcttccaaatagtcccacaagtgtttatgtcagtagataagctcaaataa 29430896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 215
Target Start/End: Original strand, 32821837 - 32821965
Alignment:
Q  88 agagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    ||||||||| |||||||| ||||| || || |||||  ||| |||||||||||  ||||  |||  |||| |||||| ||| |||||| ||| |||||||    
T  32821837 agagcttatagaaataaactgaaaacagcttatggacatgtcataagttgtttctataaactcttccaaacagtcttgcaaatgcttacgttggtagata 32821936  T
Q  187 agctaaaataagttaatccaaacaaatcc 215  Q
    |||| |||||||| |||| ||||| ||||    
T  32821937 agctcaaataagtcaatctaaacagatcc 32821965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 122 - 206
Target Start/End: Original strand, 33981186 - 33981270
Alignment:
Q  122 atgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcca 206  Q
    |||||| |||||  ||||||||||||| | ||| | ||||| ||||||||||| | |||||| |||||| ||||||| |||||||    
T  33981186 atgtgtcataagccgttttcataagttttttcagacagtctcacaagtgcttaagctagtaggtaagctcaaataagctaatcca 33981270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 169
Target Start/End: Original strand, 43808628 - 43808668
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagt 169  Q
    ||||||| |||||||||| ||||||||||||||||||||||    
T  43808628 ataagttattttcataagctctctcaaatagtcttacaagt 43808668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 171 - 210
Target Start/End: Original strand, 18179061 - 18179100
Alignment:
Q  171 cttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||||||| |||||||| ||||||||||    
T  18179061 cttatgttagtagataagctcaaataagtcaatccaaaca 18179100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 167 - 210
Target Start/End: Complemental strand, 30990401 - 30990358
Alignment:
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||||||||||| |||||||  ||||||||||    
T  30990401 agtgcttatgttagtagataagctcaaataagccaatccaaaca 30990358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 198
Target Start/End: Complemental strand, 43530105 - 43530042
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||||||||||| |||  | ||| |||||||| ||||||||||||| |||| |||||||    
T  43530105 tgttttcataagttctcccaagcactctcacaagtgcatatgttagtagattagctcaaataag 43530042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 787402 - 787484
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||| ||||||||||||||||| |||| ||| | |||||||||||||  |||||||| |||  |||||   |||||||||||    
T  787402 ataagctgttttcataagttctcacaaacagtgtcacaagtgcttatgccagtagatatgctcgaataatccaatccaaacaa 787484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 215
Target Start/End: Original strand, 15120253 - 15120339
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaatcc 215  Q
    ||||||||||| |||||| |||| |||| ||  | |||| || ||||| ||||||||||| | |||||||| |||||||||| ||||    
T  15120253 ataagttgtttccataagctctcccaaacagattcacaactgtttatgctagtagataagttcaaataagtcaatccaaacagatcc 15120339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Original strand, 32837389 - 32837439
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttat 175  Q
    ||||||||| ||||||||||||||||| |||| ||||| |||||| |||||    
T  32837389 tgttataagctgttttcataagttctcccaaacagtctcacaagtacttat 32837439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Original strand, 43811180 - 43811262
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||||| |||||| | ||||||| ||| | ||||||||||  | ||||||||||| | |||||| | |||||||||||    
T  43811180 ataagttgtttccataaggtttctcaaacagtatcacaagtgcttgagctagtagataagattaaataaatcaatccaaacaa 43811262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 138 - 167
Target Start/End: Original strand, 1625980 - 1626009
Alignment:
Q  138 tttcataagttctctcaaatagtcttacaa 167  Q
    ||||||||||||||||||||||||||||||    
T  1625980 tttcataagttctctcaaatagtcttacaa 1626009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 3078584 - 3078527
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||| | ||||||| || |||| ||||||||||| |||||||| ||||||||||    
T  3078584 caaatagtttgacaagtgtttgtgttggtagataagctcaaataagtcaatccaaaca 3078527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 210
Target Start/End: Complemental strand, 4326374 - 4326315
Alignment:
Q  154 aaatagtcttacaagtgcttatgttagtag---ataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||||||||||  |||||   ||||||| |||||||| ||||||||||    
T  4326374 aaatagtcttacaagtgcttatgacagtagataataagctcaaataagtcaatccaaaca 4326315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Original strand, 9478015 - 9478108
Alignment:
Q  117 tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| ||| ||||||||||||||||||  ||| | |||||||| | ||||| || || || |||||||| | |||||||| ||||| ||||    
T  9478015 tatggatatgtgataagttgttttcataaggactcccgaatagtctcataagtgtttgtgctaatagataagttcaaataagtcaatcccaaca 9478108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 9996808 - 9996889
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||  ||||| |||| |||  ||||| |||||| |||||| |||| |||||||| |||||||| || |||||||    
T  9996808 ataagttgtttctataagctctcccaagcagtctcacaagtacttatgctagttgataagctcaaataagtcaagccaaaca 9996889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 15370299 - 15370242
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| ||||| |||| ||||||||  |||||||||||| |||||||| ||||||||||    
T  15370299 caaacagtctcacaaatgcttatgccagtagataagctcaaataagtcaatccaaaca 15370242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 198
Target Start/End: Original strand, 15377824 - 15377904
Alignment:
Q  117 tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||| |||| ||||||||||| ||||  || || |||| || ||||||| |||||||||||||| ||||||| |||||||    
T  15377824 tatggacgtgtcataagttgtttccatagattttc-caaacagccttacaattgcttatgttagtacataagctcaaataag 15377904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 19629427 - 19629464
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtct 162  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  19629427 tgttataagttgtttccataagttctcccaaatagtct 19629464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 162
Target Start/End: Original strand, 19826328 - 19826365
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtct 162  Q
    ||||||||||||||| ||||||||||| ||||||||||    
T  19826328 tgttataagttgtttccataagttctcccaaatagtct 19826365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 37276838 - 37276895
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| ||||| |||||||||||| ||||||||||| || ||||||||  |||||||||    
T  37276838 caaacagtctcacaagtgcttatattagtagataaacttaaataagtcgatccaaaca 37276895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 38077072 - 38076992
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| | ||||||||||||| | ||| ||||||| |||||| | |||| ||||| ||||| || |||| |||||    
T  38077072 taagttgttttaagaagttctctcaaacaatctcacaagtgtttatgtgaatagaaaagctcaaatatgtcaatcgaaaca 38076992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 158 - 210
Target Start/End: Original strand, 40759259 - 40759311
Alignment:
Q  158 agtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||||||| | |||||||||| |||||||  ||||||||||    
T  40759259 agtctcacaagtgcttatgtcaatagataagctcaaataaggcaatccaaaca 40759311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 68 - 151
Target Start/End: Complemental strand, 43065512 - 43065428
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaa-ctatggatgtgttataagttgttttcataagttctc 151  Q
    |||| ||||||||| | |||||||||||| |||||||  ||||| |||  ||||||  ||| |||||||||||||||||| ||||    
T  43065512 gttttcataagttatcgtggagagcttattgaaataagctgaaaacaatttatggacatgtcataagttgttttcataagctctc 43065428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 177
Target Start/End: Complemental strand, 44606110 - 44606062
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgt 177  Q
    ||||||||||||||||||||||  |||| |||| ||||||| |||||||    
T  44606110 ataagttgttttcataagttcttccaaacagtcgtacaagtacttatgt 44606062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 51; Significance: 3e-20; HSPs: 43)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 2460196 - 2460070
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    ||||||||||||||||||||  ||||| ||||| |  ||  ||| ||||||||||| |||||| ||||||||| ||||| |||||| |||||| ||||      
T  2460196 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagttt 2460097  T
Q  184 ataagctaaaataagttaatccaaaca 210  Q
    ||||||| |||||||||||||||||||    
T  2460096 ataagctcaaataagttaatccaaaca 2460070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 85 - 187
Target Start/End: Original strand, 10031757 - 10031860
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    ||||||||||| |||||||| |||||| ||||| |||||| |||  ||||||| ||||||| | ||| ||||| ||||| |||||||||||||| |||||    
T  10031757 tggagagcttaaggaaataagatgaaaacaacttatggatatgtcgtaagttggtttcataggctctttcaaacagtctcacaagtgcttatgtcagtag 10031856  T
Q  184 ataa 187  Q
    ||||    
T  10031857 ataa 10031860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 32206005 - 32205932
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||||||| || |||| |||| |||||| ||||||||||| | |||||||| ||||||||||    
T  32206005 ttttcataagttctctcaaaaagccttataagtacttatgctagtagataaggtcaaataagtcaatccaaaca 32205932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 35070466 - 35070385
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||| |||||||||  |||||| |||| ||||  ||||||||||||||||||||||||||| |||||||  |||||||||||    
T  35070466 taagctgttttcatttgttctcccaaacagtcccacaagtgcttatgttagtagataagctcaaataagaaaatccaaacaa 35070385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 130 - 210
Target Start/End: Original strand, 33089577 - 33089657
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||||||||||||||||| ||||||||| |||| | | ||||| |||||||||||| |||||||| || |||||||    
T  33089577 taagctgttttcataagttctctgaaatagtctcacaaatacatatgtcagtagataagctcaaataagtcaacccaaaca 33089657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 26559239 - 26559160
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||||||||||||||  |||| ||||| |||| ||||||||  ||||| ||| || |||||||||||||||||    
T  26559239 ataagttgttttcataagttcttccaaacagtctcacaaatgcttatgccagtaggtaaactcaaataagttaatccaaa 26559160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 4325281 - 4325224
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||| ||||||| |||||||||||||||| ||||||| ||| ||||||||||    
T  4325281 caaatagtctcacaagtgtttatgttagtagataaactaaaattagtcaatccaaaca 4325224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 34538217 - 34538137
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||||| ||||| ||||||||||||||| |||||||||||| | ||||||||||  ||||| ||| ||| ||||||    
T  34538217 taagctgtttttataagatctctcaaatagtctcacaagtgcttatatgagtagataagaaaaaatgagtcaattcaaaca 34538137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 148 - 211
Target Start/End: Original strand, 1432228 - 1432291
Alignment:
Q  148 tctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||| ||||| |||| ||||||||| |||||||||||||||||||   |||||||||||    
T  1432228 tctctcaaacagtctaacaattgcttatgtgagtagataagctaaaataaaccaatccaaacaa 1432291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 32171445 - 32171302
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaacta-tggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    |||| ||| ||||| |||||| |||||||||||||||  |||||  | ||  ||||  ||| ||||| |||||||||||| ||||||||| |||||  ||    
T  32171445 gttttcattagttatcctggatagcttatggaaataagctgaaaatagcttctggacttgtcataagctgttttcataagctctctcaaacagtctcgca 32171346  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| | ||  |||||| |||||||  ||||||||||    
T  32171345 agtgcttatgtcaatacttaagctgaaataagacaatccaaaca 32171302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 88 - 210
Target Start/End: Original strand, 34403883 - 34404006
Alignment:
Q  88 agagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    |||||||||||||||||  ||||| || || ||| |  ||| ||||||||||||| ||| |||||  ||| ||||| ||||||| ||||| ||||  ||     
T  34403883 agagcttatggaaataaggtgaaaacaccttatgaacatgtcataagttgttttcttaacttctcctaaacagtctaacaagtgtttatgctagtttatt 34403982  T
Q  187 agctaaaataagttaatccaaaca 210  Q
    |||| |||||||||||||||||||    
T  34403983 agctgaaataagttaatccaaaca 34404006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 3181069 - 3180999
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    ||||||||||| ||| || ||| ||||||||||| ||||||||||||||  ||||||||| | ||||||||    
T  3181069 ataagttgtttacattagctctttcaaatagtctcacaagtgcttatgtctgtagataagttcaaataagt 3180999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 167
Target Start/End: Complemental strand, 20368180 - 20368142
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaa 167  Q
    ||||||||||||||||||||||| |||||||||||||||    
T  20368180 ataagttgttttcataagttctcccaaatagtcttacaa 20368142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 124 - 210
Target Start/End: Complemental strand, 28005561 - 28005475
Alignment:
Q  124 gtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||| ||||| |||||  ||||| ||| |||||||||||||||||||  ||||| |||||| |||| || ||||| |||||    
T  28005561 gtgttataagctgtttacataaactctcttaaacagtcttacaagtgcttatgccagtaggtaagctcaaatgagctaatctaaaca 28005475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 210
Target Start/End: Complemental strand, 19752802 - 19752725
Alignment:
Q  133 gttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||| ||||| ||||||||||||||| |||||||||||  | | ||||||||   ||||| |||||||||||||    
T  19752802 gttgtttttataagctctctcaaatagtctcacaagtgcttaaataactagataagagcaaataggttaatccaaaca 19752725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 30536953 - 30536884
Alignment:
Q  141 cataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| |||| ||||| | |||| ||||||| ||||||||| || |||||||| ||||||||||    
T  30536953 cataagttctcacaaacagtctaataagtacttatgtaagtagataaactcaaataagtcaatccaaaca 30536884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 2455330 - 2455397
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    |||||||||||||||||||||||||||||||| | || |   |||||||| ||||||||||| ||||||    
T  2455330 ataagttgttttcataagttctctcaaatagtttcacca-aacttatgtttgtagataagctcaaataa 2455397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 88 - 199
Target Start/End: Original strand, 30523965 - 30524077
Alignment:
Q  88 agagcttatggaaataaaatgaaatcaacta-tggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    |||||||||||||||||  | ||| |||||| ||||  ||| |||| ||||||||||||||| ||||||| |||  | ||||||||||||  | || |||    
T  30523965 agagcttatggaaataagctaaaagcaactaatggacatgtcataatttgttttcataagttttctcaaagagttgtgcaagtgcttatgcaaatacata 30524064  T
Q  187 agctaaaataagt 199  Q
    |||| ||||||||    
T  30524065 agctcaaataagt 30524077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 187
Target Start/End: Complemental strand, 34544138 - 34544086
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataa 187  Q
    |||||||||||| ||| ||||||||| | |||||||||| |||||||||||||    
T  34544138 tgttttcataagatctttcaaatagtttcacaagtgcttgtgttagtagataa 34544086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 34939526 - 34939662
Alignment:
Q  73 cataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgc 171  Q
    |||||| || |||| |||| ||||||||||||  ||||| ||||| | ||| |||| ||||||||||| |||||| ||||||||| | | ||||||||      
T  34939526 cataagctatcctgaagaggttatggaaataagctgaaaacaacttacggacgtgtcataagttgtttccataagctctctcaaacaattttacaagtcg 34939625  T
Q  172 ttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||| || | |||||||| | |||||||  ||||||||    
T  34939626 ttacgtcactagataagttcaaataagccaatccaaa 34939662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 1669798 - 1669751
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatg 176  Q
    |||||||||||||||||| |||| ||| ||||||||||||||| ||||    
T  1669798 ataagttgttttcataagctctcccaattagtcttacaagtgcatatg 1669751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 125 - 204
Target Start/End: Complemental strand, 8147070 - 8146991
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    |||||||||||||||||||||| ||| | ||| ||||| ||||||| |||||| | ||| ||| || |||||||| ||||    
T  8147070 tgttataagttgttttcataagctctttgaaacagtctaacaagtggttatgtcaataggtaaacttaaataagtcaatc 8146991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 165 - 208
Target Start/End: Original strand, 12111073 - 12111116
Alignment:
Q  165 caagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||||||| ||||||||||||| |||||||| ||||||||    
T  12111073 caagtgcttatgctagtagataagctcaaataagtcaatccaaa 12111116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 27693439 - 27693392
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatg 176  Q
    ||||||||||| ||||| |||||||||||||||| |||||| ||||||    
T  27693439 ataagttgtttccataaattctctcaaatagtctcacaagtacttatg 27693392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 199
Target Start/End: Original strand, 8348292 - 8348366
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    ||||||||||||||||| |||| ||||||||| ||| | | || || |||| |  ||||||||||||||||||||    
T  8348292 tgttataagttgttttcgtaagctctctcaaacagtatcaaaaatgattatatcggtagataagctaaaataagt 8348366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 185
Target Start/End: Complemental strand, 10353755 - 10353705
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagat 185  Q
    |||||||| ||| |||| |||| ||||| ||||||||||||||||||||||    
T  10353755 tgttttcacaagctctcccaaacagtctcacaagtgcttatgttagtagat 10353705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 725655 - 725586
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||||||||||| |||||| |||  ||| || |||| |||||||||| ||||| || |||||||    
T  725655 ataagttgttttcataagctctctcgaatgttctcacgagtgtttatgttagttgataatctcaaataag 725586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Original strand, 2457035 - 2457092
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| ||||||||||||||||||||  |||||||| || |||||||  ||||||||||    
T  2457035 caaacagtcttacaagtgcttatgtcggtagataatctcaaataagccaatccaaaca 2457092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 4080986 - 4081055
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||||||||||  |||||||||||||   |||||  ||||||| |||||||||| | |||||||    
T  4080986 ataagttgttttcataaaatctctcaaatagtgccacaagcacttatgtcagtagataagtttaaataag 4081055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 218
Target Start/End: Complemental strand, 7945884 - 7945796
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaatccata 218  Q
    ||||||||||||||||| ||||| ||||   | | || ||||||||||| ||||||||||||  ||||||| |||| ||||||| |||||    
T  7945884 ataagttgttttcataatttctcccaaaccatgtcacgagtgcttatgtcagtagataagct-caataagtcaatctaaacaaacccata 7945796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 162
Target Start/End: Complemental strand, 9559538 - 9559505
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtct 162  Q
    ||||||||||||||||||||||| ||||||||||    
T  9559538 ataagttgttttcataagttctcccaaatagtct 9559505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 22743551 - 22743631
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||| || |||| || |||||||||||| | |||| ||| |||||||| ||||||||   |||||||||||    
T  22743551 ataagttgttttcatgagctctcacagatagtcttacaatttctta-gtttgtagataaactaaaatatcctaatccaaaca 22743631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 117 - 210
Target Start/End: Complemental strand, 27924615 - 27924522
Alignment:
Q  117 tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||| |||||||||| ||||| |||||  ||||| | | ||||||| || ||||||||  ||||| |||||| |||| || |||||||||||    
T  27924615 tatggacgtgttataagatgtttacataaactctcttataaagtcttataaatgcttatgccagtaggtaagctcaaatgagctaatccaaaca 27924522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 31338046 - 31338123
Alignment:
Q  129 ataagttgttttcataagttctctcaaat-agtcttacaagtgcttatgttagtagataagctaaaataagttaatcc 205  Q
    |||||||||||||||||| |||| ||||  ||| ||  | ||||||||| ||||||||||||| |||||||| |||||    
T  31338046 ataagttgttttcataagctctcacaaaagagttttgtacgtgcttatgctagtagataagctcaaataagtcaatcc 31338123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 141 - 210
Target Start/End: Complemental strand, 33068590 - 33068521
Alignment:
Q  141 cataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||| |||| | | || ||||||||||||| |||||||||| | |||||||  ||||||||||    
T  33068590 cataagttctcccaaacacttttccaagtgcttatgtcagtagataagttcaaataagccaatccaaaca 33068521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 33737640 - 33737721
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||| |||||||||||||||||| |||   ||||||| |||||| | ||||||| ||  ||||||| | ||||||||    
T  33737640 ataagttgtgttcataagttctctcaaacagttgcacaagtgtttatgtcaatagataaactcgaataagtcattccaaaca 33737721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 2458956 - 2458880
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||| ||| | ||| |||| | ||||||||| || |||||||||| || |||| |||||| ||||||||    
T  2458956 tgttttcataagctcttttaaacagtcgtgcaagtgcttttgctagtagataaactcaaattagttaacccaaacaa 2458880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 138 - 210
Target Start/End: Complemental strand, 7901822 - 7901750
Alignment:
Q  138 tttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||| |||  |||| ||||| ||||| ||||||| || || |||| || |||||||||||||||||||    
T  7901822 tttcataagctcttccaaacagtctcacaagggcttatgatactatataaactcaaataagttaatccaaaca 7901750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 131 - 167
Target Start/End: Complemental strand, 10645382 - 10645346
Alignment:
Q  131 aagttgttttcataagttctctcaaatagtcttacaa 167  Q
    ||||||||||||||||||||| |||| ||||||||||    
T  10645382 aagttgttttcataagttctcccaaacagtcttacaa 10645346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 124 - 156
Target Start/End: Original strand, 18611139 - 18611171
Alignment:
Q  124 gtgttataagttgttttcataagttctctcaaa 156  Q
    ||||||||||||||||||||||||| |||||||    
T  18611139 gtgttataagttgttttcataagttatctcaaa 18611171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 208
Target Start/End: Complemental strand, 24973996 - 24973948
Alignment:
Q  160 tcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||||||||||||| || ||||||| | ||||||| |||||||||    
T  24973996 tcttacaagtgcttatgtcagcagataagttcaaataagctaatccaaa 24973948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 27857428 - 27857496
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    |||||||||||||||||| |||| |||| ||| | |||||||  ||||| ||||||||| || ||||||    
T  27857428 ataagttgttttcataagctctcccaaacagtttcacaagtgtctatgtcagtagataaactcaaataa 27857496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 132 - 176
Target Start/End: Original strand, 31668430 - 31668474
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatg 176  Q
    ||||||||||||||| |||||| |||||||| ||||||| |||||    
T  31668430 agttgttttcataagctctctctaatagtctcacaagtgtttatg 31668474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 3e-20; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 85 - 210
Target Start/End: Complemental strand, 27123397 - 27123271
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    ||||||||||||||||||||  ||||| ||||| |  ||  ||| ||||||||||| |||||| ||||||||| ||||| |||||| |||||| ||||      
T  27123397 tggagagcttatggaaataagttgaaaacaacttaaagacatgtcataagttgtttccataagctctctcaaacagtctcacaagtacttatgctagttt 27123298  T
Q  184 ataagctaaaataagttaatccaaaca 210  Q
    ||||||| |||||||||||||||||||    
T  27123297 ataagctcaaataagttaatccaaaca 27123271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 73 - 211
Target Start/End: Complemental strand, 56186958 - 56186816
Alignment:
Q  73 cataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgtttt---cataagttctctcaaatagtcttacaag 168  Q
    ||||||||| || |||||||||||||||||||  | ||  ||||| ||| || |||||||||||||| |   | |||||| |||| |||||||| |||||    
T  56186958 cataagttatccgggagagcttatggaaataagtttaatacaacttatgaatatgttataagttgttgtttccgtaagttttctcgaatagtctcacaag 56186859  T
Q  169 tgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    || |||||||||||||||| ||  |||||||||||||||||||    
T  56186858 tgtttatgttagtagataaactcgaataagttaatccaaacaa 56186816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 87 - 199
Target Start/End: Complemental strand, 33534212 - 33534099
Alignment:
Q  87 gagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagat 185  Q
    ||||||||||| ||||||  ||||| ||||| |||||| ||| | || ||||||||||||| ||||||||||| ||| |||||| ||||||| | |||||    
T  33534212 gagagcttatgaaaataagctgaaaacaacttatggatatgtcacaatttgttttcataagctctctcaaatactctcacaagtacttatgtcactagat 33534113  T
Q  186 aagctaaaataagt 199  Q
    ||||| ||||||||    
T  33534112 aagctcaaataagt 33534099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 68 - 196
Target Start/End: Complemental strand, 18628605 - 18628486
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaactatggatgtgttataagttgttttcataagttctctcaaatagtcttacaa 167  Q
    |||| ||||||||| | ||||||||||||||||||||  ||||| |||||         | |||||||||||||||||| |||| |||| ||||| ||||    
T  18628605 gttttcataagttatcttggagagcttatggaaataagctgaaaacaact---------tcataagttgttttcataagctctcccaaacagtctcacaa 18628515  T
Q  168 gtgcttatgttagtagataagctaaaata 196  Q
    ||| |||||| |||||||||||| |||||    
T  18628514 gtgtttatgtcagtagataagctcaaata 18628486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 88 - 212
Target Start/End: Original strand, 6428046 - 6428171
Alignment:
Q  88 agagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    ||||||||||||||||   | ||||||||| |||||  ||| |||||||||||||||||  |||||||||  |||| ||||||||||||   | || |||    
T  6428046 agagcttatggaaatatgcttaaatcaacttatggacatgtcataagttgttttcataatctctctcaaactgtctcacaagtgcttataccaatatata 6428145  T
Q  187 agctaaaataagttaatccaaacaaa 212  Q
    |||| |||||||| ||| ||||||||    
T  6428146 agctcaaataagtcaattcaaacaaa 6428171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 17822864 - 17822784
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||| ||||||  ||||||||| ||| |  ||||||| |||||||||||| |||||||||||||||||||    
T  17822864 ataagctgttttcatatgttctcctaaatagtctcaca-gaacttatgtcagtagataagctcaaataagttaatccaaaca 17822784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 133 - 210
Target Start/End: Original strand, 53315400 - 53315477
Alignment:
Q  133 gttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||| |||| |||||||||||| | ||||||||   ||| |||||||| |||||||| ||||||||||    
T  53315400 gttgttttcataagctctcacaaatagtcttatatgtgcttataccagtggataagctcaaataagtcaatccaaaca 53315477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 4691918 - 4691986
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||| |||||||| ||||||||||||| ||||||| || ||  |||||||||||| ||||||    
T  4691918 ataagttgtttccataagttttctcaaatagtctcacaagtgattgtgacagtagataagctcaaataa 4691986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 68 - 211
Target Start/End: Original strand, 14011242 - 14011386
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    ||||||||||| || | ||||||||||||||||||||  ||||| || || |  ||  ||| ||||  | ||| |||||| |||| |||||||| |||||    
T  14011242 gtttacataagctatcttggagagcttatggaaataagctgaaaacagcttaaagacatgtgataaactctttgcataagctctcccaaatagttttaca 14011341  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
     |||||||||| |||||||||| | ||| |||| |||||||||||    
T  14011342 tgtgcttatgtaagtagataagttcaaagaagtaaatccaaacaa 14011386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 135 - 219
Target Start/End: Original strand, 28615411 - 28615494
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaatccatat 219  Q
    ||||||||||||||||| |||| | ||| ||||||| ||||| |||||||||| || |||||||| |||||||||| | ||||||    
T  28615411 tgttttcataagttctc-caaacaatctcacaagtgtttatgctagtagataaacttaaataagtcaatccaaacagacccatat 28615494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 131 - 211
Target Start/End: Original strand, 32421172 - 32421252
Alignment:
Q  131 aagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||| |||||||| ||||||||| |||||| |||||| |||||| ||||  ||| ||| |||||||| |||||||||||    
T  32421172 aagttgatttcataacttctctcaagtagtctcacaagtccttatgctagtgaatatgctcaaataagtcaatccaaacaa 32421252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 49940165 - 49940086
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||||||||||||||||||||| ||||| ||||   |||||||||| || |||||| |||||||| ||||||||||    
T  49940165 taagctgttttcataagttctctcaaacagtctcacaa-aacttatgttagcaggtaagctcaaataagtcaatccaaaca 49940086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 2996643 - 2996718
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    |||||||||||||||||| ||||||||| ||||| | |||||||||||| | || ||||| | ||||||| |||||    
T  2996643 ataagttgttttcataagctctctcaaacagtctcaaaagtgcttatgtcaataaataagttcaaataagctaatc 2996718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 136 - 215
Target Start/End: Complemental strand, 9720647 - 9720568
Alignment:
Q  136 gttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaatcc 215  Q
    |||| |||||||| ||||||| |||||  | ||||||||||||||||||||| || |||||||| ||||| |||| ||||    
T  9720647 gtttccataagttttctcaaacagtctatctagtgcttatgttagtagataaactcaaataagtcaatcccaacagatcc 9720568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 135 - 186
Target Start/End: Original strand, 22471350 - 22471401
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    ||||||||||||||||| |||| ||||| |||||||||||||| ||||||||    
T  22471350 tgttttcataagttctcccaaacagtctcacaagtgcttatgtcagtagata 22471401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 40 - 115
Target Start/End: Original strand, 53943586 - 53943661
Alignment:
Q  40 tcaactgttttcaaataacctatgggtggtttacataagttaccctggagagcttatggaaataaaatgaaatcaa 115  Q
    ||||||||||||| |||| ||||  || |||||||||||||  | ||||||||||||||||||||  |||||||||    
T  53943586 tcaactgttttcatataaactataagttgtttacataagttgtcatggagagcttatggaaataagctgaaatcaa 53943661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 152 - 210
Target Start/End: Complemental strand, 18512492 - 18512434
Alignment:
Q  152 tcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||||| ||||||| |||||| |||||||||||| ||||||||||||| |||||    
T  18512492 tcaactagtctcacaagtgtttatgtcagtagataagctcaaataagttaatcgaaaca 18512434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 125 - 211
Target Start/End: Complemental strand, 37575940 - 37575854
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||||| |||||||||||||||||||| | | | || || | ||||| ||| |||||| || |||||||| |||||||||||    
T  37575940 tgttataagttattttcataagttctctcaaacaatgtcacgagagtttatgctagcagataaactcaaataagtcaatccaaacaa 37575854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 3549547 - 3549486
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||||||||||||| ||||| | |||||||||||  | ||||||| ||||||||||    
T  3549547 ttttcataagttctctcaaacagtctcataagtgcttatgccaatagataaactaaaataag 3549486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 143 - 203
Target Start/End: Complemental strand, 21469909 - 21469848
Alignment:
Q  143 taagttctctcaaatagtcttacaa-gtgcttatgttagtagataagctaaaataagttaat 203  Q
    |||||||||||||||||| |||||| ||| ||||||| ||||||||||| ||||||| ||||    
T  21469909 taagttctctcaaatagtgttacaaagtgtttatgtttgtagataagctcaaataagctaat 21469848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 47399555 - 47399636
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||| ||||||||||||  ||||| ||||||  |||||  |||| ||||| | |||||||||||| ||||||    
T  47399555 ataagttgttttcacaagttctctcaatcagtctcacaagtttttatgccagtatataagttcaaataagttaattcaaaca 47399636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 210
Target Start/End: Complemental strand, 55870334 - 55870261
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||| | ||||||| ||||| |||| || |||||| | ||||||| || |||||||||||||||||||    
T  55870334 ttttcataagctatctcaaagagtctcacaaatgtttatgtcattagataaactcaaataagttaatccaaaca 55870261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 4071948 - 4072016
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||| |||||||||||| ||||||||| ||||| |||||||||||| ||| ||| ||| || ||||||    
T  4071948 ataagctgttttcataagctctctcaaacagtctcacaagtgcttatattaatagttaacctcaaataa 4072016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 22662247 - 22662170
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| ||||||||||||||| ||    || |||  ||||||||||||||||||||| || |||||||| ||||||||||    
T  22662247 ataagtttttttcataagttctccca----gtgttatgagtgcttatgttagtagataaactcaaataagtcaatccaaaca 22662170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 22666726 - 22666649
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| ||||||||||||||| ||    || |||  ||||||||||||||||||||| || |||||||| ||||||||||    
T  22666726 ataagtttttttcataagttctccca----gtgttatgagtgcttatgttagtagataaactcaaataagtcaatccaaaca 22666649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 208
Target Start/End: Original strand, 29375917 - 29376052
Alignment:
Q  73 cataagttaccctggagagcttatggaaataaaatgaaatcaac-tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgc 171  Q
    ||||||||| | |||||| |||||||||||||  ||||| |||  ||||||  ||| ||||| ||||| |||||| ||||| ||||||  | ||||||||    
T  29375917 cataagttatcgtggaga-cttatggaaataagttgaaaacaaaatatggacctgtcataagctgtttccataagctctctgaaatagcgtcacaagtgc 29376015  T
Q  172 ttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||| | |||||||| | |||||||  ||||||||    
T  29376016 ttatgtcaatagataagttcaaataagccaatccaaa 29376052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 209
Target Start/End: Complemental strand, 32831522 - 32831438
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaac 209  Q
    |||||||||||||||||||  |||||| ||||  || | | |||||||||||| |||||||||||| |||| ||  |||||||||    
T  32831522 tgttataagttgttttcatctgttctcccaaaaggtatcaaaagtgcttatgtcagtagataagctcaaatgagccaatccaaac 32831438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 153 - 197
Target Start/End: Original strand, 50298609 - 50298653
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    |||| ||||| |||||||||||||| |||||||||||||||||||    
T  50298609 caaacagtctcacaagtgcttatgtcagtagataagctaaaataa 50298653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 135 - 175
Target Start/End: Complemental strand, 50742830 - 50742790
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttat 175  Q
    |||||||||||||||||||||| ||||| ||||||||||||    
T  50742830 tgttttcataagttctctcaaacagtctaacaagtgcttat 50742790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 124 - 208
Target Start/End: Original strand, 50746040 - 50746124
Alignment:
Q  124 gtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||| |||| ||||||||||||  || | |||||||||| |||||||||||||  ||||||||| || |||||||| ||| ||||    
T  50746040 gtgtcataaattgttttcataaactcacacaaatagtctcacaagtgcttatgcaagtagataaactcaaataagtcaatacaaa 50746124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 85 - 207
Target Start/End: Original strand, 10365796 - 10365923
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaacta-----tggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgtta 179  Q
    |||||| |||||||||||||  ||||| ||||||     ||||  |||||||| ||||||  ||||| | |||||||||||||  | |||| |||||| |    
T  10365796 tggagaccttatggaaataagctgaaagcaactaacttatggacatgttataatttgtttcgataagctgtctcaaatagtctctccagtgtttatgtca 10365895  T
Q  180 gtagataagctaaaataagttaatccaa 207  Q
    ||||||||| | |||||||| |||||||    
T  10365896 gtagataagattaaataagtcaatccaa 10365923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 204
Target Start/End: Original strand, 24091533 - 24091608
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    ||||||||||| |||||||||||  ||| ||| |  |||||| |||||||||||||||| || |||||| ||||||    
T  24091533 ataagttgtttccataagttctccaaaacagtttggcaagtgtttatgttagtagataaactcaaataaattaatc 24091608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 136 - 211
Target Start/End: Complemental strand, 39178259 - 39178184
Alignment:
Q  136 gttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||||||| |||| ||| | | ||||| |||||| |||||||| ||| ||||| || |||||||||||    
T  39178259 gttttcataagttctcccaaacagtgtcaaaagtgtttatgtcagtagatatgcttaaatacgtcaatccaaacaa 39178184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 46859999 - 46860066
Alignment:
Q  140 tcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaa 207  Q
    ||||||| ||||||||| ||| | |||||||||||||| | |||||||| | |||||||| |||||||    
T  46859999 tcataagctctctcaaacagtttcacaagtgcttatgtgaatagataagttcaaataagtcaatccaa 46860066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 27725284 - 27725354
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    ||||||| ||| |||||| ||||||||| |||| || | |||||||| | |||||||||||| ||||||||    
T  27725284 ataagttatttccataagctctctcaaacagtcgtatatgtgcttatctcagtagataagctcaaataagt 27725354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 158 - 208
Target Start/End: Complemental strand, 32421029 - 32420979
Alignment:
Q  158 agtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||| ||||||||||||| |||||| |||||| |||||||| ||||||||    
T  32421029 agtctcacaagtgcttatgctagtaggtaagctcaaataagtcaatccaaa 32420979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 124 - 190
Target Start/End: Complemental strand, 37863959 - 37863893
Alignment:
Q  124 gtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagct 190  Q
    |||| ||||| |||||||||||||||||||||||||| || || ||||| |||  |||| |||||||    
T  37863959 gtgtcataagctgttttcataagttctctcaaatagttttgcatgtgctaatgccagtacataagct 37863893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 128 - 198
Target Start/End: Complemental strand, 49004042 - 49003973
Alignment:
Q  128 tataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||| || |||||||||||||||||||||||||| ||||   |||| | ||||||||||||| |||||||    
T  49004042 tataacttattttcataagttctctcaaatagtctcacaa-aacttaagctagtagataagctcaaataag 49003973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 87 - 151
Target Start/End: Original strand, 1137739 - 1137804
Alignment:
Q  87 gagagcttatggaaataaaatgaaatcaac-tatggatgtgttataagttgttttcataagttctc 151  Q
    ||||||||||||||||||| ||||| |||| |||| |  ||| ||||| |||||||||||||||||    
T  1137739 gagagcttatggaaataaactgaaaacaacttatgaacatgtcataagatgttttcataagttctc 1137804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 13126575 - 13126495
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||| |||||||||  |||| ||||| ||||   ||||||||||||| ||||||||||||||  ||||||||||    
T  13126575 ataagctgtttttataagttcttccaaacagtctcacaaaa-cttatgttagtaggtaagctaaaataagccaatccaaaca 13126495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 210
Target Start/End: Complemental strand, 17975313 - 17975256
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||| | ||||||| || |||| ||||||||||| |||||||| ||||||||||    
T  17975313 caaatagtttgacaagtgtttgtgttggtagataagctcaaataagtcaatccaaaca 17975256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 153 - 198
Target Start/End: Original strand, 21157862 - 21157907
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||| |||||||||||||||||||| ||||||| |||| |||||||    
T  21157862 caaacagtcttacaagtgcttatgtcagtagatgagctcaaataag 21157907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 206
Target Start/End: Original strand, 24087406 - 24087483
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcca 206  Q
    ||||||||||| |||||||||||  ||| ||| |  |||||| |||||||||||||||| || |||||| || |||||    
T  24087406 ataagttgtttccataagttctccaaaacagtttggcaagtgtttatgttagtagataaactcaaataaattgatcca 24087483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 135 - 208
Target Start/End: Complemental strand, 24160523 - 24160450
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||||||| | |||||| ||| |||||| ||||| |  || |||||||| |||||||| ||||||||    
T  24160523 tgttttcataagttcacccaaataatctcacaagtacttatatctgttgataagctcaaataagtaaatccaaa 24160450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 161
Target Start/End: Original strand, 45214436 - 45214473
Alignment:
Q  124 gtgttataagttgttttcataagttctctcaaatagtc 161  Q
    |||| |||||||| ||||||||||||||||||||||||    
T  45214436 gtgtcataagttgatttcataagttctctcaaatagtc 45214473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 49939942 - 49939882
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||||||||  |||||||||| ||||  ||||||| ||||||||||||| |||||||    
T  49939942 ttttcataagttcttccaaatagtctcacaaa-gcttatgctagtagataagcttaaataag 49939882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 190
Target Start/End: Complemental strand, 51560289 - 51560228
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagct 190  Q
    ||||| |||||||||||| |||| |||| ||||| | |||||||||||  ||||||||||||    
T  51560289 ataaggtgttttcataaggtctcccaaagagtctcataagtgcttatgccagtagataagct 51560228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 197
Target Start/End: Complemental strand, 1555000 - 1554940
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||| |||||||||| |||||| ||||| ||||   ||||||||||||| ||||||    
T  1555000 ttttcataaattctctcaaacagtcttgcaagttcttagtgtagtagataagctcaaataa 1554940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 160 - 204
Target Start/End: Complemental strand, 25487526 - 25487482
Alignment:
Q  160 tcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    ||||||||||||||||| || ||||||| || |||||||||||||    
T  25487526 tcttacaagtgcttatgctaatagataaactcaaataagttaatc 25487482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 211
Target Start/End: Complemental strand, 27122158 - 27122082
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||| ||| | ||| |||| | ||||||||| || |||||||||| || |||| |||||| ||||||||    
T  27122158 tgttttcataagctcttttaaacagtcgtgcaagtgcttttgctagtagataaactcaaattagttaacccaaacaa 27122082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 148 - 208
Target Start/End: Complemental strand, 37636167 - 37636107
Alignment:
Q  148 tctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||| |||| ||| ||||| |||||||||||||||||||| || |||||| | ||||||||    
T  37636167 tctcccaaacagttttacaggtgcttatgttagtagataaactcaaataaatcaatccaaa 37636107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 50; Significance: 1e-19; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 87 - 207
Target Start/End: Complemental strand, 10199451 - 10199330
Alignment:
Q  87 gagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagat 185  Q
    ||||||||||| ||||||  ||||| ||||| ||| |  ||| ||||| | ||||||| ||||||| |||||||| | ||||||||||||||||||||||    
T  10199451 gagagcttatgaaaataagctgaaaacaacttatgaacatgtcataagctattttcatgagttctcccaaatagtgtcacaagtgcttatgttagtagat 10199352  T
Q  186 aagctaaaataagttaatccaa 207  Q
    ||||| |||||||| |||||||    
T  10199351 aagctcaaataagtcaatccaa 10199330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 133 - 209
Target Start/End: Original strand, 6659754 - 6659830
Alignment:
Q  133 gttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaac 209  Q
    |||||| ||||||| | || |||||||||| ||||||||||||| |||||||||||||||||||||| |||||||||    
T  6659754 gttgttatcataagctatcccaaatagtctcacaagtgcttatgctagtagataagctaaaataagtcaatccaaac 6659830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 130 - 211
Target Start/End: Complemental strand, 50644253 - 50644173
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||||||||||||| |||| ||||| ||||   | |||||||||||||||||| |||||||| |||||||||||    
T  50644253 taagttgttttcataagttctcccaaacagtctcacaaaa-catatgttagtagataagctcaaataagtcaatccaaacaa 50644173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 4757408 - 4757487
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||||||||||||||  ||||| |||| ||||||| |||||| | |||||||||| |||||||| || |||||    
T  4757408 ataagttgttttcataagttctgccaaatggtctcacaagtgtttatgtcaatagataagctcaaataagtcaaaccaaa 4757487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 18327146 - 18327067
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||||||||||||||  |||||||| | | |||||||||||  |||||||||||| |||||||  ||||||||    
T  18327146 ataagttgttttcataagttcttccaaatagtgtcaaaagtgcttatgacagtagataagctcaaataagccaatccaaa 18327067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 32515435 - 32515360
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||| |||| |||| ||||| |||||||||||||||||||||||| || ||||| | |||||||||||    
T  32515435 tgtttccataagctctcccaaacagtctcacaagtgcttatgttagtagataaactcaaatatgctaatccaaaca 32515360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 51929462 - 51929383
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||| |||||||||||||||||| ||| ||| | ||| |||||||||| |||||||||||| ||| |||| ||||||||    
T  51929462 ataagctgttttcataagttctcttaaacagtgtcacaggtgcttatgtcagtagataagctcaaaaaagtcaatccaaa 51929383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 130 - 199
Target Start/End: Original strand, 16980874 - 16980943
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    |||||||||| |||||| ||||||||||||||| |||||| |||||||| ||| ||||| | ||||||||    
T  16980874 taagttgtttccataagctctctcaaatagtctcacaagtacttatgttggtatataagttcaaataagt 16980943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 153 - 208
Target Start/End: Complemental strand, 9602630 - 9602575
Alignment:
Q  153 caaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||||| ||||||||||| ||||||||||||||| | |||||| ||||||||    
T  9602630 caaatagtctcacaagtgcttaagttagtagataagctcagataagtcaatccaaa 9602575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 129 - 208
Target Start/End: Original strand, 15581324 - 15581403
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||| ||| || |||  |||| | ||| |||||||||||||| |||||||||||||||||||| || ||||||    
T  15581324 ataagttgtttccattagctcttccaaacaatctcacaagtgcttatgtcagtagataagctaaaataagctattccaaa 15581403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 33723444 - 33723301
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    |||| |||||| ||||||| | |||||||||||||||  ||||| || || ||| |  ||| || || ||||| |||||||| || |||  ||||| |||    
T  33723444 gttttcataagctaccctgtaaagcttatggaaataagctgaaaacatctcatgaacatgtcatgagctgtttccataagttttcccaagcagtctcaca 33723345  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| ||||| ||||||||||| | |||||||| ||||||||||    
T  33723344 agtgtttatggtagtagataagttcaaataagtcaatccaaaca 33723301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 166 - 212
Target Start/End: Original strand, 6292599 - 6292645
Alignment:
Q  166 aagtgcttatgttagtagataagctaaaataagttaatccaaacaaa 212  Q
    |||||||||||| |||||||||||| |||||||| ||||||||||||    
T  6292599 aagtgcttatgtcagtagataagctcaaataagtcaatccaaacaaa 6292645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 6557051 - 6557112
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    |||||||||||||||||||||||||| ||||   |||||||||||||||||| | ||||||||    
T  6557051 ttttcataagttctctcaaatagtctcacaa-aacttatgttagtagataagttcaaataagt 6557112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 129 - 199
Target Start/End: Original strand, 28075774 - 28075844
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    |||||||||||||| |||||  |||||| || || |||||| ||||| |||||||||||||| ||||||||    
T  28075774 ataagttgttttcacaagttaactcaaacagcctcacaagttcttatattagtagataagctcaaataagt 28075844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 31517737 - 31517671
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||| |||||||||| |||| ||||| |||||||||||||  |||| ||||||| |||||||    
T  31517737 agttgttttgataagttctcccaaacagtctcacaagtgcttatgccagtaaataagctcaaataag 31517671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 601110 - 601191
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||| ||  ||||| |||| ||||| | ||||||||||||||  ||||||||| || ||||| ||||||||||    
T  601110 ataagttgttttcttagattctcccaaacagtctcaaaagtgcttatgttatcagataagctcaagtaagtcaatccaaaca 601191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 204
Target Start/End: Original strand, 4200303 - 4200379
Alignment:
Q  128 tataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatc 204  Q
    |||||||||||||||| || |||| |||| ||||| |||| ||||||| | |||| |||| ||||||||||| ||||    
T  4200303 tataagttgttttcattagctctcacaaacagtctcacaaatgcttatatcagtatataaactaaaataagtcaatc 4200379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 125 - 197
Target Start/End: Complemental strand, 14737730 - 14737658
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||| |||||| ||||| || |||| ||||| ||||||||||||  ||||| ||||||| ||||||    
T  14737730 tgttataagttattttcacaagttttcccaaacagtctcacaagtgcttattctagtaaataagctcaaataa 14737658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 209
Target Start/End: Complemental strand, 24417735 - 24417655
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaac 209  Q
    |||||||||||| | |  |||| ||||||||||| |||||| ||||| ||| ||||||| || |||||||| |||||||||    
T  24417735 ataagttgtttttacacattctttcaaatagtctcacaagtacttatattaatagataaactcaaataagtcaatccaaac 24417655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 164 - 212
Target Start/End: Original strand, 33975679 - 33975727
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaaacaaa 212  Q
    |||||||||| |||||||||||||||| |||||||| || |||||||||    
T  33975679 acaagtgcttgtgttagtagataagctcaaataagtgaacccaaacaaa 33975727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 128 - 176
Target Start/End: Original strand, 36070250 - 36070298
Alignment:
Q  128 tataagttgttttcataagttctctcaaatagtcttacaagtgcttatg 176  Q
    ||||||||||||||||||||||||  ||| ||||| |||||||||||||    
T  36070250 tataagttgttttcataagttctcctaaacagtctcacaagtgcttatg 36070298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 164 - 207
Target Start/End: Original strand, 2832077 - 2832120
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaa 207  Q
    ||||||||||||| ||||||||||||| ||||||| ||||||||    
T  2832077 acaagtgcttatgctagtagataagctcaaataagctaatccaa 2832120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 88 - 198
Target Start/End: Original strand, 3110019 - 3110130
Alignment:
Q  88 agagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagata 186  Q
    |||||||||||||||||   |||| ||| | |||||||||| | ||||||||| ||||||||||  |||| |||||   |||||||||||| | ||| ||    
T  3110019 agagcttatggaaataagcggaaaacaagttatggatgtgtcacaagttgtttgcataagttcttacaaacagtctcggaagtgcttatgtcactagtta 3110118  T
Q  187 agctaaaataag 198  Q
    |||| |||||||    
T  3110119 agctcaaataag 3110130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 128 - 199
Target Start/End: Complemental strand, 11218015 - 11217944
Alignment:
Q  128 tataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    |||||||||||||||  ||||||| ||||  |||| ||||||||| |||| ||||||| |||| ||||||||    
T  11218015 tataagttgttttcaccagttctcccaaaccgtctcacaagtgctcatgtcagtagattagctcaaataagt 11217944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 176
Target Start/End: Complemental strand, 43371891 - 43371844
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatg 176  Q
    ||||| |||||||||||| ||||||||| ||||| |||||||||||||    
T  43371891 ataagctgttttcataagctctctcaaacagtctcacaagtgcttatg 43371844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 49282712 - 49282635
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||| |||||||||||| ||| ||| ||||||| ||||||| ||||||||||||| || || ||||||| |||||||||    
T  49282712 ataagctgttttcataagctct-tcagatagtctcacaagtgtttatgttagtagacaa-ctcaaataagctaatccaaa 49282635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 135 - 177
Target Start/End: Original strand, 8382417 - 8382459
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgt 177  Q
    |||||||||||||||||||||| ||||| |||| |||||||||    
T  8382417 tgttttcataagttctctcaaagagtctcacaaatgcttatgt 8382459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 83 - 212
Target Start/End: Original strand, 10439709 - 10439839
Alignment:
Q  83 cctggagagcttatggaaataaaatgaaatca-actatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagt 181  Q
    ||||||||| ||||||||||||  ||||| || | ||||||  ||| |||  ||||||||||||| |||| |||||||||| |||||  ||||||    |    
T  10439709 cctggagagtttatggaaataagctgaaagcagattatggacatgtcatagtttgttttcataagctctcccaaatagtctcacaagatcttatggccat 10439808  T
Q  182 agataagctaaaataagttaatccaaacaaa 212  Q
    | ||||||| |||||||| ||| ||||||||    
T  10439809 aaataagctcaaataagtcaattcaaacaaa 10439839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 136 - 210
Target Start/End: Original strand, 26866390 - 26866464
Alignment:
Q  136 gttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||||| |||  |||||||||| | ||||  || |||||||||||||||| |||||||| ||||||||||    
T  26866390 gtttccataagctcttccaaatagtctcagaagtatttgtgttagtagataagctgaaataagtcaatccaaaca 26866464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 175
Target Start/End: Original strand, 42336685 - 42336731
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttat 175  Q
    |||||||||||||||||||| ||||||| ||||  ||||||||||||    
T  42336685 ataagttgttttcataagttatctcaaacagtcgcacaagtgcttat 42336731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 176
Target Start/End: Complemental strand, 49692067 - 49692005
Alignment:
Q  114 aactatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatg 176  Q
    |||||||||  ||| ||||| | |||||||||||||||||||| ||||| |||||| ||||||    
T  49692067 aactatggacatgtcataagctattttcataagttctctcaaacagtctcacaagttcttatg 49692005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 1662643 - 1662712
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||||| | |||| |||| ||||||||||  || || |||||| ||||||||||||| |||||||    
T  1662643 ataagttgtttccgtaagctctcgcaaatagtctcgcatgtacttatgctagtagataagctcaaataag 1662712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 142 - 211
Target Start/End: Complemental strand, 4180720 - 4180651
Alignment:
Q  142 ataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||| |||| |||||| ||| ||||||| |||||  |||| |||||| ||| |||||||||||||||||    
T  4180720 ataagctctcacaaataatctgacaagtggttatgcaagtaaataagcaaaagtaagttaatccaaacaa 4180651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Complemental strand, 28837352 - 28837284
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||| ||||||| ||||| |||| ||| |||||  ||||||||||||| |||||||||||| |||||||    
T  28837352 ataagctgttttcgtaagt-ctcttaaacagtctctcaagtgcttatgtcagtagataagctcaaataag 28837284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 155 - 208
Target Start/End: Complemental strand, 29793672 - 29793619
Alignment:
Q  155 aatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||| ||||||| |||||| |||||||||||| |||||||| ||| ||||    
T  29793672 aatagtctcacaagtgtttatgtcagtagataagctcaaataagtcaatacaaa 29793619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 43420328 - 43420409
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| ||||| |||||| |||| |||  ||||| ||||||| ||||||  ||||||||||| ||||||| |||||| ||||    
T  43420328 ataagctgtttccataagatctcacaagcagtctcacaagtgtttatgtctgtagataagctcaaataagctaatcctaaca 43420409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 92 - 199
Target Start/End: Complemental strand, 5592004 - 5591897
Alignment:
Q  92 cttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagct 190  Q
    |||||||||||||| ||||| |  || ||| | |||| ||||| |||||||||||| ||||||||| |||| ||||  |||||||   ||||||||||||    
T  5592004 cttatggaaataaattgaaaacggcttatgcacgtgtcataagctgttttcataagctctctcaaacagtc-tacacatgcttataccagtagataagct 5591906  T
Q  191 aaaataagt 199  Q
     ||||||||    
T  5591905 caaataagt 5591897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 199
Target Start/End: Original strand, 6279475 - 6279539
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    ||||| |||||| ||||||||| || |  |||||||||||||| ||||| |||||| ||||||||    
T  6279475 tgtttccataagctctctcaaacagccacacaagtgcttatgtcagtagttaagctgaaataagt 6279539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 140 - 208
Target Start/End: Complemental strand, 7252609 - 7252541
Alignment:
Q  140 tcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||||||| |||| ||| |  ||||| ||||||||||||||| |||| ||||||| |||| ||||    
T  7252609 tcataagttctcccaaacagtttctcaagtacttatgttagtagattagctcaaataagctaattcaaa 7252541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 204
Target Start/End: Original strand, 27140503 - 27140623
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaac-tatggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    ||||||||||||| ||||||  ||||| |||| ||||||  ||| ||||| ||||| | |||  ||||||||| || ||||||| || |||||| | |||    
T  27140503 tggagagcttatgcaaataagctgaaaacaacttatggacatgtcataagctgtttccttaaactctctcaaagagacttacaattgtttatgtcaatag 27140602  T
Q  184 ataagctaaaataagttaatc 204  Q
    ||||||| | |||||| ||||    
T  27140603 ataagctcatataagtcaatc 27140623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 40485773 - 40485717
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagat 185  Q
    ||||| |||||  |||||||||| |||| ||||| |||||||||||||| |||||||    
T  40485773 ataagatgtttcaataagttctcccaaacagtctcacaagtgcttatgtaagtagat 40485717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 142 - 190
Target Start/End: Original strand, 44217454 - 44217502
Alignment:
Q  142 ataagttctctcaaatagtcttacaagtgcttatgttagtagataagct 190  Q
    ||||| |||| |||| ||||||||||||||||| || ||||||||||||    
T  44217454 ataagctctcccaaaaagtcttacaagtgcttacgtcagtagataagct 44217502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 137 - 173
Target Start/End: Original strand, 49173463 - 49173499
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgctt 173  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  49173463 ttttcgtaagttctctcaaatagtctcacaagtgctt 49173499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 171 - 207
Target Start/End: Original strand, 50725336 - 50725372
Alignment:
Q  171 cttatgttagtagataagctaaaataagttaatccaa 207  Q
    ||||| || ||||||||||||||||||||||||||||    
T  50725336 cttattttcgtagataagctaaaataagttaatccaa 50725372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 48; Significance: 2e-18; HSPs: 30)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 75 - 208
Target Start/End: Original strand, 32849196 - 32849327
Alignment:
Q  75 taagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgctt 173  Q
    ||||||| |||||||||| ||||||| |||| ||||| || || |||  ||||| ||||||| ||||||||||||||| |||| || || ||||||||||    
T  32849196 taagttatcctggagagcatatggaa-taaactgaaaacagcttatg--tgtgtcataagtttttttcataagttctcccaaacagcctcacaagtgctt 32849292  T
Q  174 atgttagtagataagctaaaataagttaatccaaa 208  Q
    ||| ||||||||||||| |||||||| ||| ||||    
T  32849293 atgatagtagataagcttaaataagtcaattcaaa 32849327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 129 - 205
Target Start/End: Original strand, 8090006 - 8090082
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcc 205  Q
    |||||||||||||||||| |||||||||||||||  | ||||||| |||||||||||||| | |||||||| |||||    
T  8090006 ataagttgttttcataagctctctcaaatagtctcgcgagtgcttgtgttagtagataagttcaaataagtcaatcc 8090082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 143 - 210
Target Start/End: Complemental strand, 10638521 - 10638454
Alignment:
Q  143 taagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||| |||| |||||||||||||||||||||||||| |||||||| || |||||||| ||||||||||    
T  10638521 taagctctcccaaatagtcttacaagtgcttatgttggtagataatcttaaataagtcaatccaaaca 10638454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 499731 - 499650
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| ||||||||||||||||| |||| || || ||| |||||||||| ||||| |||||| |||||||| ||||||||||    
T  499731 ataagctgttttcataagttctcccaaacagcctaacaggtgcttatgtcagtaggtaagctcaaataagtcaatccaaaca 499650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 12460001 - 12459920
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||| |||||| |||| ||||| ||| |||||||||| || ||||||||  |||||||| ||||||||||    
T  12460001 ataagttgttttcataggttctcccaaacagtctcacaggtgcttatgtcagcagataagccgaaataagtcaatccaaaca 12459920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 135 - 211
Target Start/End: Original strand, 11104981 - 11105057
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||||||||||| |||||||| | ||||||||||||| | || |||||||| |||||| | |||||||||||    
T  11104981 tgttttcataagttctcccaaatagtatcacaagtgcttatgctggttgataagctcaaataaatcaatccaaacaa 11105057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 5377197 - 5377115
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||| |||||||||||||| || | || |||||||||||||||||||| | |||||||||| |||||||  ||||| |||||    
T  5377197 ataagctgttttcataagttatcgctaacagtcttacaagtgcttatgtcaatagataagctcaaataagccaatccgaacaa 5377115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 73 - 198
Target Start/End: Complemental strand, 10125775 - 10125649
Alignment:
Q  73 cataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgc 171  Q
    ||||||||||| ||||||||||||| ||||||  ||||| || || ||  |  ||| ||||||||||| |||||||||||||| | | | | ||||||||    
T  10125775 cataagttaccatggagagcttatgaaaataagctgaaaacaccttatcaacatgtcataagttgtttacataagttctctcagacaatgtcacaagtgc 10125676  T
Q  172 ttatgttagtagataagctaaaataag 198  Q
    | |||| |||||||||||| |||||||    
T  10125675 tcatgtcagtagataagcttaaataag 10125649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 26004962 - 26004916
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||| |||||||||||||||||||||| ||||||||||    
T  26004962 acaagtgcttatgctagtagataagctaaaataagtcaatccaaaca 26004916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 42646969 - 42647041
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||  ||||||||||| |||||||| |||| |||||||||||| |||||||  ||||||||||    
T  42646969 ttttcataagttcttccaaatagtctt-caagtgctaatgtcagtagataagctcaaataagccaatccaaaca 42647041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 130 - 210
Target Start/End: Complemental strand, 11297195 - 11297115
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||| |||||| ||| ||||| ||||||||||||| |||||  | |||||||||| |||||||| ||| ||||||    
T  11297195 taagttgtttccataagctctttcaaacagtcttacaagtgtttatgccactagataagcttaaataagtcaattcaaaca 11297115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 126 - 210
Target Start/End: Complemental strand, 14599375 - 14599291
Alignment:
Q  126 gttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||  ||||| ||||||||| | ||||||||||| ||||| ||||| ||||| | |||||| | ||||||||||    
T  14599375 gttataagttgtttcgataagctctctcaaacaatcttacaagtgtttatgctagtaaataagttcaaataactgaatccaaaca 14599291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 164 - 210
Target Start/End: Complemental strand, 25705624 - 25705578
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||||||||||| | |||||| ||||||||||||    
T  25705624 acaagtgcttatgttagtagataagttcaaataatttaatccaaaca 25705578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 132 - 210
Target Start/End: Complemental strand, 35135649 - 35135571
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||| |||| | |||| | |||||| | ||||||| |||||| |||||| ||||| |||||||||||||||||||    
T  35135649 agttgtttccataggctctcccgaatagtatcacaagtggttatgtcagtagagaagctgaaataagttaatccaaaca 35135571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 137 - 210
Target Start/End: Original strand, 36639600 - 36639673
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||||||||||||| ||||||| |||||||||||| | ||| |||| | |||||||  ||||||||||    
T  36639600 ttttcgtaagttctctcaaacagtcttataagtgcttatgtaaataggtaagttcaaataagacaatccaaaca 36639673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 134 - 210
Target Start/End: Complemental strand, 25720412 - 25720336
Alignment:
Q  134 ttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| ||||| ||||||| | ||||| |||||||||||||  ||||||||| || ||||||| |||| ||||||    
T  25720412 ttgtttttataagctctctcagacagtctcacaagtgcttatgccagtagataacctcaaataagctaattcaaaca 25720336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 158 - 198
Target Start/End: Complemental strand, 39257365 - 39257325
Alignment:
Q  158 agtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||| ||||||||||||||||||||||||||| |||||||    
T  39257365 agtctcacaagtgcttatgttagtagataagcttaaataag 39257325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 190
Target Start/End: Original strand, 17259289 - 17259348
Alignment:
Q  131 aagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagct 190  Q
    ||||||||| || ||| || |||||  ||||| |||||||||||||||||||||||||||    
T  17259289 aagttgtttccaaaagctcactcaacaagtctcacaagtgcttatgttagtagataagct 17259348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 137 - 199
Target Start/End: Original strand, 37968955 - 37969017
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    |||||||||| ||||||||| ||| | |||||| ||||||| |||||||||||| ||| ||||    
T  37968955 ttttcataagatctctcaaacagtttcacaagtacttatgtcagtagataagctcaaacaagt 37969017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Original strand, 15015922 - 15015982
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||||||||| |||| ||||| ||||  |||||||| |||||||||||| |||||||    
T  15015922 ttttcataagttctcccaaacagtctcacaaa-gcttatgtcagtagataagctcaaataag 15015982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 137 - 198
Target Start/End: Complemental strand, 17258875 - 17258814
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||| |||||| |||| | | | |||||||||||||||||| |||||||| |||||||    
T  17258875 ttttcataggttctcccaaagaatgtcacaagtgcttatgttagttgataagctcaaataag 17258814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 35445847 - 35445763
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||| ||||||||||| |||| ||||| ||||| ||||   ||||||| ||||||||| || ||||||| | |||||||||    
T  35445847 tgttataagctgttttcataaattctgtcaaagagtctcacaa-aacttatgtcagtagataaactcaaataagatgatccaaaca 35445763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 130 - 211
Target Start/End: Original strand, 35960484 - 35960564
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||| || |||||| ||||||||||||||| || | ||||||||  | | |||||||| ||||||||||| ||||||||    
T  35960484 taagttgcttccataagctctctcaaatagtctgac-attgcttatgccaattgataagctcaaataagttaacccaaacaa 35960564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 158 - 211
Target Start/End: Complemental strand, 36796678 - 36796625
Alignment:
Q  158 agtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||| ||||||| |||||| | |||||||||| |||||||| |||||||||||    
T  36796678 agtctcacaagtgtttatgtcattagataagctcaaataagtcaatccaaacaa 36796625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 11095495 - 11095427
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||| ||||| || ||||||||||||| | | | ||||||| |||||| |||||||||||| ||||||    
T  11095495 ataagctgtttccacaagttctctcaaacaatatcacaagtgtttatgtcagtagataagcttaaataa 11095427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 164 - 208
Target Start/End: Complemental strand, 11615619 - 11615575
Alignment:
Q  164 acaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||| ||||||||||||||||||| |||||||  ||||||||    
T  11615619 acaagtgtttatgttagtagataagctcaaataagccaatccaaa 11615575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 85 - 208
Target Start/End: Original strand, 14980535 - 14980658
Alignment:
Q  85 tggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtag 183  Q
    |||||||||||||||||||| | |||| ||||| ||| |  ||| ||||||  |||| ||||| ||||||||| |||||    ||||||||||  |||||    
T  14980535 tggagagcttatggaaataagacgaaa-caacttatgtacatgtcataagtcatttttataagctctctcaaacagtctctatagtgcttatgccagtag 14980633  T
Q  184 ataagctaaaataagttaatccaaa 208  Q
    ||||||| |||||||| | ||||||    
T  14980634 ataagctcaaataagtcattccaaa 14980658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 26796423 - 26796490
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||| | ||||||||| |||||| | ||| ||||| ||||||||||| ||||||| ||||||    
T  26796423 ataagttgtttccttaagttctc-caaataatgttagaagtgtttatgttagtacataagctcaaataa 26796490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 32172723 - 32172791
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||||||||| |||||| |||| ||||   ||| ||||||||||||| ||||| ||||||| ||||||    
T  32172723 ataagttgtttccataagctctcccaaactatctcacaagtgcttatgctagtatataagctcaaataa 32172791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 166 - 210
Target Start/End: Original strand, 42034167 - 42034211
Alignment:
Q  166 aagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||| ||||| |||||| ||||||| |||||||||||    
T  42034167 aagtgcttatgtcagtaggtaagctcaaataagctaatccaaaca 42034211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 46; Significance: 3e-17; HSPs: 38)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 8094376 - 8094445
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||| |||||||||||  ||||||||||||||| ||||||||||||| ||||||||||||| |||||||    
T  8094376 ataagctgttttcataaaatctctcaaatagtctcacaagtgcttatgctagtagataagctcaaataag 8094445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 23214925 - 23215006
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||| |||||||||| ||||| | ||||| ||||| ||||||||||| | |||||||| ||||||||||    
T  23214925 ataagttgttttcataaattctctcaaacagtctcataagtgtttatgctagtagataaggtcaaataagtcaatccaaaca 23215006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 83 - 210
Target Start/End: Original strand, 33894650 - 33894778
Alignment:
Q  83 cctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagt 181  Q
    |||||| || |||| |||||||  ||||| ||||| |||||  ||| ||| | |||||||||||| |||| |||| ||||| |||||||||||||| | |    
T  33894650 cctggaaagtttattgaaataagctgaaaacaacttatggacatgtcatatgctgttttcataagctctcacaaacagtctcacaagtgcttatgtcatt 33894749  T
Q  182 agataagctaaaataagttaatccaaaca 210  Q
     |||||||| ||||||| |||||||||||    
T  33894750 tgataagctcaaataagctaatccaaaca 33894778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 129 - 199
Target Start/End: Complemental strand, 25670586 - 25670516
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    |||||||||||||||||||| ||||||| ||||| ||||| |||||||| | |||||||||| || |||||    
T  25670586 ataagttgttttcataagttttctcaaacagtctcacaagagcttatgtcaatagataagctcaagtaagt 25670516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 4970791 - 4970711
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||||||||| |||| ||||| |||||  ||||||| |  ||||||||| |||||||| ||||||||||    
T  4970791 ataagttgttttcataagttctcccaaacagtctcacaag-acttatgtcacgagataagctcaaataagtcaatccaaaca 4970711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 125 - 210
Target Start/End: Complemental strand, 30749038 - 30748953
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||  ||||||||||||||||||||||| ||||| |||   |||||||| |||||||||||| |||||| | ||| ||||||    
T  30749038 tgttatagattgttttcataagttctctcaaacagtctcacattggcttatgtcagtagataagctcaaataactcaattcaaaca 30748953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 125 - 205
Target Start/End: Complemental strand, 13960727 - 13960648
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatcc 205  Q
    ||||||||| |||||||||||| |||||||||||||||  ||||||||||||  | | |||||||| |||||||| |||||    
T  13960727 tgttataagctgttttcataagctctctcaaatagtctcgcaagtgcttatg-caatggataagctcaaataagtcaatcc 13960648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 142 - 210
Target Start/End: Original strand, 30751602 - 30751670
Alignment:
Q  142 ataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| |||| |||| ||||  |||||||||||||| |||||||||| | |||||||||||||||||||    
T  30751602 ataagctctcccaaacagtcgcacaagtgcttatgtcagtagataagtttaaataagttaatccaaaca 30751670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 128 - 208
Target Start/End: Original strand, 46091662 - 46091742
Alignment:
Q  128 tataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||| || |||||||||||||| |||| |||||| |||| |||||||  || ||||| |||| |||||||||||||||||    
T  46091662 tataaattattttcataagttctatcaattagtctcacaaatgcttatactattagatgagctcaaataagttaatccaaa 46091742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 140 - 207
Target Start/End: Original strand, 529443 - 529510
Alignment:
Q  140 tcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaa 207  Q
    |||||||||||| ||||||| || ||||||| |||||  |||||||||||| |||||||| |||||||    
T  529443 tcataagttctcccaaatagcctcacaagtgtttatgccagtagataagctcaaataagtcaatccaa 529510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 68 - 210
Target Start/End: Complemental strand, 28691897 - 28691755
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaact-atggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    |||| |||||| || |||||||| |||||| ||||||| ||| | ||| | |||||   || ||||| |||||||||||| |||| | || ||||| |||    
T  28691897 gttttcataagctatcctggagatcttatgaaaataaactgataacaatttatggacaagtcataagctgttttcataagatctc-cgaacagtctcaca 28691799  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    | |||||||||||| |||||| || |||||||| ||||||||||    
T  28691798 aatgcttatgttagcagataaactcaaataagtcaatccaaaca 28691755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 130 - 208
Target Start/End: Original strand, 8427084 - 8427162
Alignment:
Q  130 taagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||||||||| |||| | || | |||| ||||| |||||| |||||||||||||||||||| |||||| | ||||||||    
T  8427084 taagttgtttccataggctcccccaaacagtctcacaagtacttatgttagtagataagctcaaataaatcaatccaaa 8427162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 158 - 215
Target Start/End: Original strand, 29363607 - 29363664
Alignment:
Q  158 agtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaatcc 215  Q
    ||||| ||||||||||||||||||||||||| | |||||||  |||||||||| ||||    
T  29363607 agtctcacaagtgcttatgttagtagataagttcaaataagccaatccaaacagatcc 29363664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 133 - 198
Target Start/End: Complemental strand, 43855037 - 43854972
Alignment:
Q  133 gttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||||||| |||| |||||||| |  ||| |||||||||||||||||||| | |||||||    
T  43855037 gttgttttcataagctctcccaaatagtgtcgcaaatgcttatgttagtagataagttcaaataag 43854972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 199
Target Start/End: Complemental strand, 44151471 - 44151406
Alignment:
Q  134 ttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagt 199  Q
    ||||||||||||| ||||||||||| ||| |||||| ||||||| |||| ||||| | ||||||||    
T  44151471 ttgttttcataagctctctcaaataatctcacaagtacttatgtcagtatataagttcaaataagt 44151406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 68 - 208
Target Start/End: Complemental strand, 44615166 - 44615025
Alignment:
Q  68 gtttacataagttaccctggagagcttatggaaataaaatgaaatcaacta-tggatgtgttataagttgttttcataagttctctcaaatagtcttaca 166  Q
    |||| ||||||||| ||| ||||| ||||||||||||  ||||| || ||  ||||  ||| |||||||||||||||||| ||||   || ||| || ||    
T  44615166 gttttcataagttagccttgagagtttatggaaataacgtgaaaacagcttgtggacatgtcataagttgttttcataagctctcctgaacagttttgca 44615067  T
Q  167 agtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||| ||||| ||||||||||||| || ||||  ||||||||    
T  44615066 agtggttatgctagtagataagctcaattaaggcaatccaaa 44615025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 129 - 197
Target Start/End: Complemental strand, 2825236 - 2825168
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||| || |||||||||||||  |||| ||||| |||||||||||| | |||||||||||| ||||||    
T  2825236 ataagatggtttcataagttcttccaaagagtctcacaagtgcttatataagtagataagctcaaataa 2825168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 198
Target Start/End: Original strand, 753045 - 753108
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    |||||||||||||||| ||||  ||||||| | |||||||||  |||||||||||| |||||||    
T  753045 tgttttcataagttctttcaatcagtcttagaggtgcttatgcaagtagataagctcaaataag 753108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 137 - 208
Target Start/End: Complemental strand, 3836675 - 3836604
Alignment:
Q  137 ttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    ||||||||||||||| |||| ||| | ||||||||||| |  |||||||||||| |||||||  ||||||||    
T  3836675 ttttcataagttctcccaaacagtttcacaagtgcttaagccagtagataagctcaaataaggcaatccaaa 3836604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 129 - 196
Target Start/End: Original strand, 30496775 - 30496842
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaata 196  Q
    ||||| |||||||||||| |||||||| ||||||  |||| ||||||| |||||||||| || |||||    
T  30496775 ataagctgttttcataagctctctcaagtagtctcgcaagggcttatgctagtagataaactcaaata 30496842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 210
Target Start/End: Original strand, 17942144 - 17942222
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||||||||||||||||||| | ||||| ||| ||| ||||   |||||||||||| ||| |||| | ||||||||    
T  17942144 agttgttttcataagttctctcagacagtctcacaggtgtttattgcagtagataagctcaaacaagtcattccaaaca 17942222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 165 - 211
Target Start/End: Complemental strand, 17988997 - 17988951
Alignment:
Q  165 caagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||| |||||  |||||||||||| ||||||||||||||||||||    
T  17988997 caagtgattatgcgagtagataagctcaaataagttaatccaaacaa 17988951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 129 - 211
Target Start/End: Complemental strand, 22387896 - 22387814
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||||||||| |||| |||| ||||| ||| ||| |||||| |||| ||||| |  | ||||| |||||||||||    
T  22387896 ataagttgttttcataagctctcccaaacagtctcacacgtgtttatgtcagtaaataagttctagtaagtcaatccaaacaa 22387814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Complemental strand, 22940059 - 22940017
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaa 167  Q
    ||||||||||||||||||||||||||  |||||||||| ||||    
T  22940059 tgttataagttgttttcataagttcttccaaatagtctcacaa 22940017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 209
Target Start/End: Complemental strand, 25659843 - 25659805
Alignment:
Q  171 cttatgttagtagataagctaaaataagttaatccaaac 209  Q
    ||||||||||||||||| || ||||||||||||||||||    
T  25659843 cttatgttagtagataatctcaaataagttaatccaaac 25659805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 167
Target Start/End: Original strand, 33678847 - 33678889
Alignment:
Q  125 tgttataagttgttttcataagttctctcaaatagtcttacaa 167  Q
    ||||||||||||||||||||||||||| ||||| |||| ||||    
T  33678847 tgttataagttgttttcataagttctcccaaattgtctcacaa 33678889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 141 - 215
Target Start/End: Complemental strand, 47042027 - 47041953
Alignment:
Q  141 cataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaaatcc 215  Q
    |||||| |||| |||| ||||| ||||||| | |||| | |||||| ||| |||||||| |||||||||||||||    
T  47042027 cataagctctcacaaaaagtctcacaagtgttaatgtcaatagatatgctcaaataagtcaatccaaacaaatcc 47041953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 166 - 211
Target Start/End: Original strand, 1418526 - 1418571
Alignment:
Q  166 aagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    |||||||||||  |||||||||||| |||||||| |||||||||||    
T  1418526 aagtgcttatgccagtagataagctcaaataagtcaatccaaacaa 1418571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Complemental strand, 19302562 - 19302482
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| ||||||||||| ||||| |||||| ||| ||||   ||||||| |||||||||||| |||||||| ||| ||||||    
T  19302562 ataagctgttttcataaattctcccaaatattctcacaaaa-cttatgtcagtagataagctcaaataagtcaattcaaaca 19302482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 154 - 207
Target Start/End: Original strand, 21073232 - 21073285
Alignment:
Q  154 aaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaa 207  Q
    ||||||||| |||| ||||||||| |||||||||||| |||||||  |||||||    
T  21073232 aaatagtctcacaattgcttatgtcagtagataagcttaaataagcaaatccaa 21073285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 132 - 197
Target Start/End: Original strand, 24895529 - 24895594
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    ||||| |||||||||||||||||| | |||| | |||||||||||| | || ||||| ||||||||    
T  24895529 agttgatttcataagttctctcaagtggtctcataagtgcttatgtcaatatataagttaaaataa 24895594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 30535633 - 30535714
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    |||||||||||||||||||||||  ||| |||||  |||||| |||||| |||| || | || |||||||| ||| ||||||    
T  30535633 ataagttgttttcataagttctccaaaacagtctctcaagtgtttatgtcagtaaattaactcaaataagtcaattcaaaca 30535714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 210
Target Start/End: Original strand, 34035988 - 34036068
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||||| ||||||||||||||  ||| |||||| |||| | | ||||| |||||||||||| |||||||| ||| ||||||    
T  34035988 ataagttattttcataagttcttccaagtagtctcacaa-tacatatgtcagtagataagctcaaataagtcaattcaaaca 34036068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 129 - 198
Target Start/End: Original strand, 46825170 - 46825239
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataag 198  Q
    ||||||||||  ||||| ||||| ||||||||||||||||  |||||| |||| |||||| | |||||||    
T  46825170 ataagttgttcccataatttctcccaaatagtcttacaagaccttatggtagtcgataagttcaaataag 46825239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 73 - 117
Target Start/End: Complemental strand, 3968814 - 3968770
Alignment:
Q  73 cataagttaccctggagagcttatggaaataaaatgaaatcaact 117  Q
    |||||| || ||||||||| |||||||||||| ||||||||||||    
T  3968814 cataagctatcctggagagtttatggaaataacatgaaatcaact 3968770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 197
Target Start/End: Original strand, 24973980 - 24974047
Alignment:
Q  129 ataagttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataa 197  Q
    |||||||||| |||||||||||| |||| ||||| |||||| || | |||| |||||||||| ||||||    
T  24973980 ataagttgttatcataagttctcccaaacagtctcacaagtactcaagtta-tagataagctcaaataa 24974047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 135 - 167
Target Start/End: Complemental strand, 27863718 - 27863686
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaa 167  Q
    |||||||||||||||||||||||||||| ||||    
T  27863718 tgttttcataagttctctcaaatagtctcacaa 27863686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 136 - 208
Target Start/End: Complemental strand, 28727756 - 28727684
Alignment:
Q  136 gttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaa 208  Q
    |||| |||||| ||||||||| |||||  ||||| |||| || |  ||||||||| |||||||||||||||||    
T  28727756 gtttccataagctctctcaaacagtctcgcaagttcttaggtcaaaagataagctcaaataagttaatccaaa 28727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 132 - 211
Target Start/End: Original strand, 69742 - 69821
Alignment:
Q  132 agttgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaacaa 211  Q
    ||||||||||||||||||||||||||||| |  ||||||  |||||  || ||||| || ||||||||||||| ||||||    
T  69742 agttgttttcataagttctctcaaatagtttctcaagtggctatgtccgtggataatcttaaataagttaatctaaacaa 69821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 135 - 210
Target Start/End: Complemental strand, 159967 - 159892
Alignment:
Q  135 tgttttcataagttctctcaaatagtcttacaagtgcttatgttagtagataagctaaaataagttaatccaaaca 210  Q
    ||||| ||| |||||||  ||||||| | ||||||| |||| |||||||||||||| |||||||  ||||||||||    
T  159967 tgtttccattagttctccaaaatagtttcacaagtgtttatattagtagataagctcaaataagccaatccaaaca 159892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University