View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20810_high_6 (Length: 453)
Name: NF20810_high_6
Description: NF20810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20810_high_6 |
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Alignment Details
Target: chr2 (Bit Score: 325; Significance: 0; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 325; E-Value: 0
Query Start/End: Original strand, 6 - 338
Target Start/End: Complemental strand, 4311466 - 4311134
Alignment:
| Q |
6 |
gtagattatactaggaatatcaatcattcttgctttggtttggtttggacaattatgtaatgcataatttatctggcatagtctccattatatgcatggt |
105 |
Q |
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| T |
4311466 |
gtagattatgctaggaatatcaatcattcttgctttggtttggtttggacaattatgtaatgcataatttatctggcatagtctccattatatgcatggt |
4311367 |
T |
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| Q |
106 |
actttcactaaacttattatttgcatcttatgttttaaagcaattctctatttccaacatcacatttcttactgttgaaataatcatcacaaactcagac |
205 |
Q |
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| T |
4311366 |
actttcactaaacttattatttgcatcttatgttttaaagcaattctctatttccaacatcacatttcttactgttgaaataatcatcacaaactcagac |
4311267 |
T |
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| Q |
206 |
taagtggatttctattatttacagaatagactctaatgtcttctttatcattatctgtacaactgtgttacaataagatactacaatttatacttataac |
305 |
Q |
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| T |
4311266 |
taagtggatttctattatttacagaatagactctgatgtcttctttatcattatctgtacaactgtgttacaataagatactacaatttatacttataac |
4311167 |
T |
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| Q |
306 |
ttgatatttttaagaccttgttttagattataa |
338 |
Q |
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| T |
4311166 |
ttgatatttttaagaccttgttttagattataa |
4311134 |
T |
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