View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20810_low_4 (Length: 519)

Name: NF20810_low_4
Description: NF20810
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20810_low_4
NF20810_low_4
[»] chr4 (60 HSPs)
chr4 (102-289)||(49923684-49923871)
chr4 (361-515)||(49922812-49922965)
chr4 (93-289)||(54372747-54372943)
chr4 (93-289)||(54373871-54374067)
chr4 (93-289)||(37642459-37642656)
chr4 (93-289)||(49922509-49922704)
chr4 (115-281)||(5546940-5547102)
chr4 (139-281)||(20945404-20945546)
chr4 (93-277)||(21570354-21570538)
chr4 (136-289)||(31204598-31204751)
chr4 (93-170)||(5417305-5417382)
chr4 (106-163)||(5548668-5548725)
chr4 (97-146)||(49923858-49923907)
chr4 (93-173)||(6616246-6616326)
chr4 (133-281)||(20944317-20944465)
chr4 (104-176)||(43709907-43709978)
chr4 (93-148)||(11113743-11113798)
chr4 (93-148)||(11115040-11115095)
chr4 (104-170)||(11482808-11482874)
chr4 (358-408)||(54373772-54373822)
chr4 (93-134)||(27408764-27408805)
chr4 (102-289)||(31205628-31205815)
chr4 (359-408)||(49923530-49923579)
chr4 (93-173)||(29686257-29686337)
chr4 (97-173)||(39592324-39592400)
chr4 (106-170)||(47572600-47572664)
chr4 (93-173)||(47668632-47668712)
chr4 (93-148)||(30682721-30682776)
chr4 (93-168)||(37558999-37559074)
chr4 (93-148)||(37560359-37560414)
chr4 (358-408)||(5547196-5547246)
chr4 (136-281)||(21569294-21569439)
chr4 (104-170)||(26045144-26045210)
chr4 (104-170)||(43708848-43708914)
chr4 (102-176)||(47242962-47243035)
chr4 (104-170)||(47573682-47573748)
chr4 (93-173)||(39590942-39591022)
chr4 (93-148)||(33377424-33377479)
chr4 (93-148)||(40143655-40143710)
chr4 (102-172)||(25764437-25764507)
chr4 (102-172)||(26107665-26107735)
chr4 (358-400)||(37642310-37642352)
chr4 (95-148)||(28103546-28103599)
chr4 (136-216)||(44219020-44219100)
chr4 (105-170)||(50497008-50497073)
chr4 (104-172)||(11822888-11822956)
chr4 (102-158)||(19630778-19630834)
chr4 (102-146)||(23752026-23752070)
chr4 (102-158)||(25764377-25764433)
chr4 (93-141)||(27410748-27410796)
chr4 (102-158)||(31208481-31208537)
chr4 (102-158)||(32617584-32617640)
chr4 (93-137)||(33376219-33376263)
chr4 (93-173)||(38371840-38371920)
chr4 (133-208)||(44217614-44217689)
chr4 (106-170)||(47244028-47244092)
chr4 (106-170)||(48413589-48413653)
chr4 (102-166)||(52658921-52658985)
chr4 (136-176)||(54823290-54823330)
chr4 (104-172)||(55013759-55013827)
[»] chr3 (51 HSPs)
chr3 (93-289)||(48338036-48338232)
chr3 (93-281)||(48336348-48336536)
chr3 (93-278)||(14206711-14206895)
chr3 (93-278)||(14214459-14214643)
chr3 (105-217)||(14213145-14213257)
chr3 (136-289)||(50003142-50003295)
chr3 (405-473)||(44945069-44945137)
chr3 (142-281)||(8895206-8895345)
chr3 (93-217)||(50719656-50719781)
chr3 (93-217)||(50793067-50793192)
chr3 (93-168)||(41387473-41387548)
chr3 (103-170)||(45730648-45730715)
chr3 (104-216)||(50150733-50150844)
chr3 (93-169)||(54752617-54752693)
chr3 (102-173)||(19579230-19579301)
chr3 (93-168)||(25583115-25583190)
chr3 (102-148)||(11483047-11483093)
chr3 (104-170)||(33000838-33000904)
chr3 (104-170)||(39531854-39531920)
chr3 (104-216)||(2088854-2088965)
chr3 (93-173)||(17350137-17350217)
chr3 (102-158)||(18024580-18024636)
chr3 (102-158)||(42592415-42592471)
chr3 (104-167)||(1031828-1031891)
chr3 (102-173)||(5416208-5416279)
chr3 (102-173)||(19579329-19579400)
chr3 (97-176)||(21247241-21247320)
chr3 (93-148)||(41386131-41386186)
chr3 (93-148)||(42632707-42632762)
chr3 (93-148)||(42633946-42634001)
chr3 (97-168)||(51825661-51825732)
chr3 (102-173)||(52293558-52293629)
chr3 (93-148)||(53808319-53808374)
chr3 (93-148)||(54654026-54654081)
chr3 (108-170)||(4067942-4068004)
chr3 (139-216)||(27226531-27226608)
chr3 (104-170)||(39530807-39530873)
chr3 (106-176)||(53901583-53901652)
chr3 (93-166)||(8371221-8371294)
chr3 (102-158)||(7583969-7584025)
chr3 (104-168)||(12062424-12062488)
chr3 (102-158)||(18024904-18024960)
chr3 (102-158)||(18270964-18271020)
chr3 (102-158)||(30267406-30267462)
chr3 (102-158)||(30385196-30385252)
chr3 (108-168)||(35174422-35174482)
chr3 (102-158)||(38771605-38771661)
chr3 (93-173)||(39133018-39133098)
chr3 (104-168)||(48867470-48867534)
chr3 (102-170)||(50765812-50765880)
chr3 (102-158)||(51891287-51891343)
[»] chr8 (47 HSPs)
chr8 (93-289)||(11080951-11081147)
chr8 (109-289)||(42307513-42307692)
chr8 (93-215)||(42314809-42314931)
chr8 (93-281)||(35462916-35463104)
chr8 (105-170)||(16346112-16346177)
chr8 (93-168)||(31623907-31623982)
chr8 (102-173)||(39325869-39325940)
chr8 (108-170)||(9190480-9190542)
chr8 (93-274)||(35462668-35462849)
chr8 (104-216)||(23768478-23768589)
chr8 (93-165)||(38790296-38790368)
chr8 (104-167)||(12818766-12818829)
chr8 (360-399)||(16497115-16497154)
chr8 (93-148)||(35945497-35945552)
chr8 (93-148)||(36756065-36756120)
chr8 (97-176)||(43416000-43416079)
chr8 (104-170)||(9189406-9189472)
chr8 (358-408)||(11080795-11080845)
chr8 (104-281)||(12820026-12820202)
chr8 (104-170)||(22914228-22914294)
chr8 (136-289)||(41767083-41767236)
chr8 (136-208)||(43414425-43414497)
chr8 (105-216)||(4534047-4534157)
chr8 (93-173)||(10053779-10053859)
chr8 (358-398)||(42307778-42307818)
chr8 (104-159)||(162649-162704)
chr8 (102-173)||(13360363-13360434)
chr8 (93-148)||(38591067-38591122)
chr8 (93-148)||(39544931-39544986)
chr8 (93-148)||(41867976-41868031)
chr8 (93-168)||(43386742-43386817)
chr8 (106-168)||(2421333-2421395)
chr8 (102-168)||(7561809-7561875)
chr8 (102-148)||(19914966-19915012)
chr8 (102-168)||(21524634-21524700)
chr8 (102-172)||(35182074-35182143)
chr8 (231-289)||(44770533-44770591)
chr8 (93-146)||(3237702-3237755)
chr8 (93-166)||(36940075-36940148)
chr8 (102-158)||(4325901-4325957)
chr8 (102-158)||(4325961-4326017)
chr8 (102-158)||(5876823-5876879)
chr8 (102-158)||(12849979-12850035)
chr8 (102-158)||(29802175-29802231)
chr8 (93-169)||(37474075-37474151)
chr8 (109-169)||(43579697-43579757)
chr8 (102-158)||(45467452-45467508)
[»] chr7 (57 HSPs)
chr7 (105-289)||(4973526-4973710)
chr7 (105-289)||(4973968-4974152)
chr7 (93-289)||(22794241-22794436)
chr7 (102-281)||(29656999-29657179)
chr7 (106-289)||(32893470-32893654)
chr7 (93-289)||(29658533-29658728)
chr7 (97-280)||(32894724-32894908)
chr7 (93-281)||(47536777-47536965)
chr7 (139-289)||(40321116-40321266)
chr7 (125-216)||(47535692-47535783)
chr7 (93-169)||(22744747-22744823)
chr7 (93-168)||(22061835-22061910)
chr7 (93-168)||(43006386-43006461)
chr7 (231-289)||(42520360-42520418)
chr7 (104-170)||(47537078-47537144)
chr7 (358-402)||(4973822-4973866)
chr7 (97-169)||(43930324-43930396)
chr7 (93-168)||(4858384-4858459)
chr7 (97-168)||(14109109-14109180)
chr7 (97-168)||(14419066-14419137)
chr7 (93-148)||(25153659-25153714)
chr7 (93-148)||(25154996-25155051)
chr7 (97-176)||(43704484-43704563)
chr7 (358-408)||(22794104-22794154)
chr7 (231-281)||(29408385-29408435)
chr7 (358-408)||(29657293-29657343)
chr7 (358-408)||(32893732-32893782)
chr7 (104-170)||(33071676-33071742)
chr7 (102-176)||(38002546-38002620)
chr7 (104-170)||(40881103-40881169)
chr7 (104-170)||(47927391-47927457)
chr7 (93-170)||(7146782-7146858)
chr7 (105-170)||(47928468-47928533)
chr7 (225-281)||(29409165-29409221)
chr7 (102-157)||(19105587-19105642)
chr7 (93-148)||(22746380-22746435)
chr7 (97-176)||(36584937-36585016)
chr7 (102-173)||(41126249-41126320)
chr7 (93-140)||(44114723-44114770)
chr7 (93-148)||(46674994-46675049)
chr7 (102-168)||(19069929-19069995)
chr7 (136-281)||(23153557-23153702)
chr7 (104-170)||(29344176-29344242)
chr7 (93-139)||(35128231-35128277)
chr7 (225-283)||(42521183-42521241)
chr7 (358-403)||(40918101-40918146)
chr7 (102-158)||(11687374-11687430)
chr7 (93-173)||(14107833-14107913)
chr7 (93-173)||(14417790-14417870)
chr7 (93-173)||(18670538-18670618)
chr7 (102-158)||(23350990-23351046)
chr7 (102-158)||(23351050-23351106)
chr7 (136-176)||(33070649-33070688)
chr7 (102-158)||(36701373-36701429)
chr7 (102-146)||(36702787-36702831)
chr7 (98-158)||(36782984-36783044)
chr7 (93-169)||(40926558-40926634)
[»] chr1 (33 HSPs)
chr1 (93-289)||(49619737-49619934)
chr1 (109-289)||(49618448-49618628)
chr1 (93-281)||(52439212-52439400)
chr1 (103-289)||(40778383-40778569)
chr1 (93-289)||(40779562-40779758)
chr1 (93-196)||(38451553-38451656)
chr1 (93-259)||(38451657-38451823)
chr1 (93-217)||(52437909-52438033)
chr1 (358-403)||(40779414-40779459)
chr1 (93-148)||(13929296-13929351)
chr1 (93-148)||(34653436-34653491)
chr1 (358-408)||(49619588-49619638)
chr1 (104-160)||(21246523-21246579)
chr1 (93-280)||(45042610-45042797)
chr1 (93-148)||(25785969-25786024)
chr1 (93-148)||(25787224-25787279)
chr1 (104-167)||(43808562-43808625)
chr1 (104-170)||(30743099-30743165)
chr1 (104-170)||(43807447-43807513)
chr1 (105-170)||(9822665-9822729)
chr1 (358-399)||(40778674-40778715)
chr1 (94-167)||(48467263-48467336)
chr1 (102-158)||(10579662-10579718)
chr1 (93-148)||(13930735-13930790)
chr1 (93-148)||(47411508-47411563)
chr1 (93-172)||(47560140-47560219)
chr1 (106-168)||(22167793-22167855)
chr1 (102-172)||(48225095-48225165)
chr1 (107-169)||(48332730-48332792)
chr1 (102-148)||(50679881-50679927)
chr1 (102-158)||(7204234-7204290)
chr1 (102-158)||(11652891-11652947)
chr1 (93-169)||(44979436-44979512)
[»] chr6 (30 HSPs)
chr6 (93-289)||(682266-682462)
chr6 (97-289)||(683461-683651)
chr6 (125-281)||(13562223-13562379)
chr6 (104-170)||(1757532-1757598)
chr6 (93-169)||(5311280-5311356)
chr6 (93-148)||(8412376-8412431)
chr6 (93-168)||(31738364-31738439)
chr6 (358-408)||(682558-682608)
chr6 (104-170)||(27108212-27108278)
chr6 (104-170)||(27150009-27150075)
chr6 (110-170)||(1693019-1693079)
chr6 (102-158)||(9899575-9899631)
chr6 (106-170)||(11724334-11724398)
chr6 (93-173)||(18139522-18139602)
chr6 (102-158)||(19048259-19048315)
chr6 (93-148)||(8411087-8411142)
chr6 (93-148)||(33802077-33802132)
chr6 (102-168)||(6889019-6889085)
chr6 (102-172)||(7829406-7829476)
chr6 (140-281)||(13561326-13561467)
chr6 (102-148)||(31740332-31740378)
chr6 (136-173)||(10673653-10673690)
chr6 (105-158)||(30860319-30860372)
chr6 (102-158)||(6889089-6889145)
chr6 (102-158)||(8286386-8286442)
chr6 (102-158)||(8938901-8938957)
chr6 (102-158)||(12153553-12153609)
chr6 (102-158)||(18693623-18693679)
chr6 (98-158)||(29836137-29836197)
chr6 (102-158)||(30859935-30859991)
[»] chr5 (59 HSPs)
chr5 (93-289)||(30916037-30916233)
chr5 (102-281)||(14357809-14357988)
chr5 (97-278)||(33362497-33362678)
chr5 (108-289)||(14356448-14356628)
chr5 (93-211)||(30912315-30912433)
chr5 (206-289)||(30915611-30915694)
chr5 (136-281)||(42962067-42962212)
chr5 (93-173)||(19825875-19825955)
chr5 (104-170)||(11907199-11907265)
chr5 (140-281)||(38603677-38603818)
chr5 (104-166)||(39134679-39134741)
chr5 (136-204)||(9038505-9038573)
chr5 (106-170)||(24071481-24071545)
chr5 (136-176)||(39050732-39050772)
chr5 (364-408)||(40815564-40815608)
chr5 (358-409)||(14357646-14357697)
chr5 (97-148)||(19523988-19524039)
chr5 (93-148)||(19525348-19525403)
chr5 (93-148)||(22812447-22812502)
chr5 (102-172)||(20841827-20841897)
chr5 (358-408)||(30915780-30915830)
chr5 (102-172)||(36442235-36442305)
chr5 (105-170)||(8284282-8284347)
chr5 (104-169)||(21011847-21011912)
chr5 (102-158)||(10570370-10570426)
chr5 (105-173)||(12829583-12829651)
chr5 (104-160)||(23679159-23679215)
chr5 (104-160)||(23855597-23855653)
chr5 (93-173)||(41905176-41905256)
chr5 (102-158)||(42382160-42382216)
chr5 (93-168)||(1273090-1273165)
chr5 (102-168)||(1155979-1156045)
chr5 (102-172)||(6131939-6132009)
chr5 (102-172)||(14858488-14858558)
chr5 (102-172)||(22803503-22803573)
chr5 (104-170)||(24070417-24070483)
chr5 (102-172)||(24099961-24100031)
chr5 (102-168)||(32411974-32412040)
chr5 (126-176)||(38602696-38602746)
chr5 (102-176)||(39051704-39051778)
chr5 (109-167)||(40058035-40058093)
chr5 (102-168)||(40059368-40059434)
chr5 (102-172)||(42382086-42382156)
chr5 (102-167)||(8762441-8762506)
chr5 (104-169)||(21006152-21006217)
chr5 (358-403)||(30915888-30915933)
chr5 (102-158)||(1156039-1156095)
chr5 (102-158)||(1156271-1156327)
chr5 (102-158)||(4349862-4349918)
chr5 (102-158)||(6172328-6172384)
chr5 (102-158)||(9040758-9040814)
chr5 (102-158)||(9438252-9438308)
chr5 (105-173)||(12861562-12861630)
chr5 (102-146)||(17094432-17094476)
chr5 (106-158)||(20841901-20841953)
chr5 (102-158)||(37812246-37812302)
chr5 (102-158)||(37812306-37812362)
chr5 (102-158)||(37812538-37812594)
chr5 (125-216)||(42963207-42963298)
[»] chr2 (28 HSPs)
chr2 (126-281)||(20921544-20921700)
chr2 (108-289)||(12364206-12364387)
chr2 (163-289)||(12365937-12366061)
chr2 (110-216)||(1257507-1257613)
chr2 (97-168)||(20921486-20921557)
chr2 (188-281)||(370863-370956)
chr2 (125-281)||(371894-372050)
chr2 (106-170)||(33553403-33553467)
chr2 (93-169)||(42596561-42596637)
chr2 (104-170)||(20630709-20630775)
chr2 (96-168)||(23178922-23178994)
chr2 (96-168)||(23590179-23590251)
chr2 (93-168)||(7036967-7037042)
chr2 (102-158)||(39110087-39110143)
chr2 (102-173)||(3665234-3665305)
chr2 (93-148)||(4829466-4829521)
chr2 (93-148)||(7038392-7038447)
chr2 (93-148)||(35799513-35799568)
chr2 (93-148)||(37867757-37867812)
chr2 (133-176)||(38594079-38594122)
chr2 (133-176)||(38597675-38597718)
chr2 (358-408)||(12365798-12365848)
chr2 (102-148)||(12854164-12854210)
chr2 (102-148)||(37869100-37869146)
chr2 (102-158)||(7031820-7031876)
chr2 (102-158)||(7182686-7182742)
chr2 (102-158)||(27516174-27516230)
chr2 (102-158)||(36099308-36099364)
[»] scaffold0034 (3 HSPs)
scaffold0034 (93-255)||(98634-98795)
scaffold0034 (93-220)||(98050-98177)
scaffold0034 (358-408)||(98342-98392)
[»] scaffold0065 (3 HSPs)
scaffold0065 (97-281)||(35368-35551)
scaffold0065 (109-217)||(36737-36845)
scaffold0065 (231-276)||(36644-36689)
[»] scaffold0041 (4 HSPs)
scaffold0041 (136-280)||(611-755)
scaffold0041 (125-281)||(1051-1207)
scaffold0041 (104-170)||(85114-85180)
scaffold0041 (358-403)||(54949-54994)
[»] scaffold1337 (1 HSPs)
scaffold1337 (141-281)||(281-422)
[»] scaffold0009 (2 HSPs)
scaffold0009 (104-170)||(205590-205656)
scaffold0009 (102-152)||(6687-6737)
[»] scaffold0046 (1 HSPs)
scaffold0046 (93-168)||(23407-23482)
[»] scaffold0013 (1 HSPs)
scaffold0013 (93-148)||(96161-96216)
[»] scaffold0120 (2 HSPs)
scaffold0120 (102-172)||(27744-27814)
scaffold0120 (102-158)||(27684-27740)
[»] scaffold0290 (1 HSPs)
scaffold0290 (96-168)||(8383-8455)
[»] scaffold0084 (1 HSPs)
scaffold0084 (93-173)||(11707-11787)


Alignment Details
Target: chr4 (Bit Score: 152; Significance: 3e-80; HSPs: 60)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 152; E-Value: 3e-80
Query Start/End: Original strand, 102 - 289
Target Start/End: Complemental strand, 49923871 - 49923684
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggcccta 201  Q
    ||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  49923871 ttggtcccttaacttattttcagtttttaatttggtcccttaactattaaacgtttcaaattggtcctttatcttcttttcatcattcaatttggcccta 49923772  T
Q  202 ttttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||| ||||||||| |||| |||| ||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  49923771 ttttatttattttaaccctcaagaaaaggagaccgttggatagatgaggtctatcagatctaactgtgtatcaccaacacgtgattta 49923684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 361 - 515
Target Start/End: Original strand, 49922812 - 49922965
Alignment:
Q  361 ttcaacaaaaactacaaaatcaaacatttaaatttataattaagaccattgtcttcctccttttcagataaaatccaacggctatcaaaatcctcatcaa 460  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  49922812 ttcaacaaaaactacaaaatcaaacatttaaatttataattaagaccattgtcttcctccttttcagataaaatccaacggcta-caaaatcctcatcaa 49922910  T
Q  461 acgattcggagaattccatcttgaacactcactgttacccaagttcttctcactc 515  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| ||||||    
T  49922911 acgattcggagaattccatcttgaacactcactgttacctaagttcttgtcactc 49922965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 93 - 289
Target Start/End: Original strand, 54372747 - 54372943
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  54372747 atacatcatttggtcccttaacttattttccgttttcaatttggtcctctaactattaaacgttccaaattggtcctttatcttctttccatcattcaat 54372846  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| |||||||||||||||||||||  ||| |||| |||||||||||||| ||||||||||| |||||||||||| |||||||||||| |||||||    
T  54372847 ttggtcctattttattcattttaacccccaagaaaaggagaccgttggataaatgaggtctattagatctaactgtgtatcaccaacacctgattta 54372943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 54374067 - 54373871
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||| |||||||||||||||  ||||||||||||||||||||||||||||||||||    
T  54374067 atacatcatttgatcccttaacttattttcagttttcaatttggtcccctaactattaaacgttctaaattggtcctttatcttctttccatcattcaat 54373968  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| |||||||||||||||||||||  ||| |||| ||||||  |||||| ||||||||||| |||||||||||| |||||||||||| |||||||    
T  54373967 ttggtcctattttattcattttaacccccaagaaaaggagaccactggataaatgaggtctataagatctaactgtgtatcaccaacacctgattta 54373871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 118; E-Value: 6e-60
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 37642656 - 37642459
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||| | ||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| | ||||||||||||||||||||||||||||    
T  37642656 atacattatttggtcccttaacttattttctgttttcaatttagtcccctaactattaaacgtttcaaaatagtcctttatcttctttccatcattcaat 37642557  T
Q  193 ttggccctattttattcattttaaccatc-aataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| ||||||| |||||||||||||  | || |||| |||||| ||||||| ||||||| |||||||||||| ||| |||||||||||| |||||||    
T  37642556 ttggtcctatttcattcattttaacctccaaaaaaaaggagaccattggataaatgaggtttatcagatctaattgtgtatcaccaacacctgattta 37642459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 93 - 289
Target Start/End: Original strand, 49922509 - 49922704
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    ||||||||||||||   |||| ||||||| |||||| ||||| |||  |||| |||||||| ||||||||||||| |||||||||||||  |||||||||    
T  49922509 atacatcagttggttt-ttaatttatttttagtttttaatttggtcttttaattattaaacatttcaaattggtcttttatcttctttctgtcattcaat 49922607  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||| |||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||    
T  49922608 ttgaccctattttattcattttaaccctcaagaaaatgagaccgttggatagatgaggtctatcagatctaactgtgtagcaccaacacatgattta 49922704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 115 - 281
Target Start/End: Original strand, 5546940 - 5547102
Alignment:
Q  115 ttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcatttt 214  Q
    |||||||  ||||||||||| | |||| ||||||||||||| |||||||||||||||||||||||| ||||||| |||||     |||||||||||||||    
T  5546940 ttattttatgttttcaatttggcccct-aactattaaacgtatcaaattggtcctttatcttcttttcatcatttaattt---aatattttattcatttt 5547035  T
Q  215 aaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||   ||| |||| |||||||||||||| |||| ||||||||||||||| |||  |||||||||||    
T  5547036 aacacccaaaaaaaggagaccgttggataaatgacgtctatcagatctaagtgtgaatcaccaacac 5547102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 139 - 281
Target Start/End: Complemental strand, 20945546 - 20945404
Alignment:
Q  139 ccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagaccgtt 238  Q
    |||||||||||||||||||||  ||||| |||| |||| |||||||||||||| |||| ||||||| ||| |||||||||  | | ||||   |||||||    
T  20945546 ccttaactattaaacgtttcattttggttctttctcttatttccatcattcaacttggtcctatttcattaattttaacctcctaaaaaagaggaccgtt 20945447  T
Q  239 ggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||| ||||| ||||| |||||||||||| ||||||||||||    
T  20945446 ggataaatgagttctattagatctaactgtgtatcaccaacac 20945404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 277
Target Start/End: Complemental strand, 21570538 - 21570354
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaa 191  Q
    |||||||  |||||||||||||||| ||    ||||| | || ||||| ||||||||||||||||||| |||||| |||||| || ||| ||||| ||||    
T  21570538 atacatcgtttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacgtttcaatttggtcatttatctttgttttcatca-tcaa 21570440  T
Q  192 tttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcacca 277  Q
    ||||  ||||||||||| ||||||| | ||   ||||  ||||||||||||| | ||||||||||||||||||  || ||||||||    
T  21570439 tttgatcctattttattaattttaaacctctcaaaaagaagaccgttggataaaggaggtctatcagatctaatcgtgtatcacca 21570354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 136 - 289
Target Start/End: Original strand, 31204598 - 31204751
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatg-aga 233  Q
    ||||| |||||||||||||||||||| ||||| |||||| || |||  |||| ||||||||| ||||||||||| ||||||| | ||  ||||| | |||    
T  31204598 gtcccctaactattaaacgtttcaaaatggtcatttatctttattttaatca-tcaatttggtcctattttattaattttaaac-tccttaaaaagaaga 31204695  T
Q  234 ccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||||||||| | || ||| |||||||||||| || |||||||||||||| |||||    
T  31204696 ccgttggataaaggatgtccatcagatctaacagtgtatcaccaacacataattta 31204751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 5417305 - 5417382
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||  |||||||||||||||||||| | |||||| ||| ||||||||||||||||| ||||||| ||| |||||    
T  5417305 atacatctcttggtcccttaacttattttaatttttcagtttggtcccttaactattaaatgtttcaatttgatcctt 5417382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 106 - 163
Target Start/End: Complemental strand, 5548725 - 5548668
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaatt 163  Q
    ||||||||||||||||| |||||||||||| |||| |||||||||||||||| |||||    
T  5548725 tcccttaacttattttccgttttcaatttaatcccctaactattaaacgttttaaatt 5548668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 97 - 146
Target Start/End: Complemental strand, 49923907 - 49923858
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaact 146  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||    
T  49923907 atcatttggtcccttaacttattttcagttttcaatttggtcccttaact 49923858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 6616326 - 6616246
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||||||||||||||||| ||||||| ||| ||||| ||||||| ||  || |||||||||||| ||||    
T  6616326 atacatcatttggtcccttaacttattttccgttttcactttggtcccctaactataaagtgtctcaaattggtcccttat 6616246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 133 - 281
Target Start/End: Original strand, 20944317 - 20944465
Alignment:
Q  133 ttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgag 232  Q
    ||||||| ||||||||||||||||| |  |||||| ||||| || |||  |||||| ||||||| | ||||| ||| |||||||||  | | ||||   |    
T  20944317 ttagtccattaactattaaacgttttattttggtcatttattttatttttatcatttaatttggtcatatttcattaattttaacctcctaaaaaagagg 20944416  T
Q  233 accgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    | ||||||||| ||||| ||||| ||||||||| || ||||||||||||    
T  20944417 atcgttggataaatgagatctattagatctaaccgtgtatcaccaacac 20944465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 104 - 176
Target Start/End: Complemental strand, 43709978 - 43709907
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||||||||||||||||| | || ||| | ||||||||||||||||||||||||||| ||||| |||||||||    
T  43709978 ggtcccttaacttattttaatttctcagtgtagtcccttaactattaaacgtttcaatttggt-ctttatctt 43709907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 11113743 - 11113798
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| |||||| |||||||||||||| ||||||| |||||||||||||||||    
T  11113743 atacatcatttggtcacttaacttattttcggttttcattttagtcccttaactat 11113798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 11115095 - 11115040
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||| |||||||    
T  11115095 atacatcatttggtcccttaacttattttcagttttcattttggtcccctaactat 11115040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 11482808 - 11482874
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| ||| ||||||||||||||||| ||||||| |||||||||    
T  11482808 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcctt 11482874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 54373822 - 54373772
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| |||||||||||||||||||||||||| ||| ||||    
T  54373822 aacttcaacaaaaaccacaaaatcaaacatttaaatttataactaacacca 54373772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 93 - 134
Target Start/End: Original strand, 27408764 - 27408805
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaattt 134  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  27408764 atacatcatttggtcccttaacttattttcagttttcaattt 27408805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 102 - 289
Target Start/End: Complemental strand, 31205815 - 31205628
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccct 200  Q
    |||||||||||||||| ||    ||||| | || ||||| |||||||||||||||||||| |||||||||||| || |||  || ||| ||||||| | |    
T  31205815 ttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctttgttttaattatt-aatttggtcat 31205717  T
Q  201 attttattcattttaaccatcaataaaatg-agaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||||||| ||||||| | ||  ||||| | ||||  ||||||| | ||| || |||||||||||| || |||||||||||||| |||||    
T  31205716 attttattaattttaaac-tccttaaaaagaagacatttggataaaggagatccatcagatctaacggtgtatcaccaacacataattta 31205628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 359 - 408
Target Start/End: Complemental strand, 49923579 - 49923530
Alignment:
Q  359 acttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    |||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  49923579 acttcaacaaaaaccacaaaatcaaacatttaaatttaaaattaacacca 49923530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 29686257 - 29686337
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| || |||||||||||||||||  ||||||| ||| ||||||||||||| ||  || |||||||||||| ||||    
T  29686257 atacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaattgtctcaaattggtcccttat 29686337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 173
Target Start/End: Complemental strand, 39592400 - 39592324
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||| ||||||||||||||||||||  ||||||| ||||||||| ||||||| ||  || |||||||||||| ||||    
T  39592400 atcatttggtcccttaacttattttatgttttcactttagtcccctaactataaagtgtctcaaattggtccattat 39592324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Original strand, 47572600 - 47572664
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||| | || |||  |||||||||||||||||||| ||||||| |||||||||    
T  47572600 tcccttaacttattttaatttctcagcttagtcccttaactattaaatgtttcaatttggtcctt 47572664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 47668712 - 47668632
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||| ||||||||||||| ||||||| ||| ||||| ||||||| ||  || |||||||||||| ||||    
T  47668712 atacatcatttggtcctttaacttattttctgttttcactttggtcccctaactataaagtgtctcaaattggtcccttat 47668632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 30682721 - 30682776
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||| | |||||||||||||||||||| |||||||| ||| |||||||||||||    
T  30682721 atacataatttggtcccttaacttatttttagttttcattttggtcccttaactat 30682776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 37558999 - 37559074
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| ||||| ||||||||||||||  ||||||||||| ||||| ||||||| ||| || |||| |||||||    
T  37558999 atacatcatttggttccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcc 37559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 37560414 - 37560359
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| |||||||    
T  37560414 atacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 37560359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 5547196 - 5547246
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||| ||||    
T  5547196 aacttcaacaaaaaccacataatcaaacctttaaatttataattaacacca 5547246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 281
Target Start/End: Original strand, 21569294 - 21569439
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagac 234  Q
    ||||| ||||||||||||||||||| |||||| |||||| || ||| ||||| || ||||   | ||||||||| ||||||| | ||   ||||  ||||    
T  21569294 gtcccctaactattaaacgtttcaatttggtcatttatctttgttttcatca-tctatttaatcatattttattaattttaaacctctcaaaaagaagac 21569392  T
Q  235 cgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||||||| | |||||| |||||||||||| || |||||| |||||    
T  21569393 cgttggataaaggaggtccatcagatctaacagtgtatcactaacac 21569439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 26045144 - 26045210
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| | | ||||||||||||||||||||||||| || ||||||    
T  26045144 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttagtcctt 26045210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 43708848 - 43708914
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||| ||||||||||||| | || ||| |||||||| |||||||||||| ||||||| |||||||||    
T  43708848 ggtctcttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcctt 43708914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Original strand, 47242962 - 47243035
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||||||||||||||||||| | || ||| |||| |||||||||||||||| |||| || ||||| |||||||||    
T  47242962 ttggtcccttaacttattttaatttctcagtttaatcccttaactattaaatgttttaatttggt-ctttatctt 47243035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 47573748 - 47573682
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| | | |||||||||||||||||||||| || |||||||||    
T  47573748 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgttttaatttggtcctt 47573682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 39590942 - 39591022
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||||||||||||||||  ||||||| ||| ||||| ||||||| ||  || ||||| |||||| ||||    
T  39590942 atacatcatttggtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaaactggtcccttat 39591022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 33377479 - 33377424
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||   |||||||||| ||||| |||||||    
T  33377479 atacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 33377424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 40143655 - 40143710
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||| | |||||| ||||||||||||| |||||||| ||||||||| |||||||    
T  40143655 atacattatttggtctcttaacttatttttagttttcattttagtcccctaactat 40143710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 25764437 - 25764507
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  25764437 ttggtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttctttttggtccttta 25764507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 26107665 - 26107735
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  26107665 ttggtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttctttttggtccttta 26107735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 400
Target Start/End: Complemental strand, 37642352 - 37642310
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataat 400  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||    
T  37642352 aacttcaacaaaaaccacataatcaaacctttaaatttataat 37642310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 95 - 148
Target Start/End: Complemental strand, 28103599 - 28103546
Alignment:
Q  95 acatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||| ||||||||||||||||||||  | ||||| ||| |||||||||||||    
T  28103599 acatcatttggtcccttaacttatttttggatttcattttggtcccttaactat 28103546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 216
Target Start/End: Complemental strand, 44219100 - 44219020
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaa 216  Q
    ||||| ||||||||||||  || |||||||||||||||| || |||  |||| ||||||||| ||||||||||| |||||||    
T  44219100 gtcccctaactattaaacactttaaattggtcctttatctttgtttttatca-tcaatttggtcctattttattgattttaa 44219020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 50497008 - 50497073
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||| |||||||||| | || ||| |||||| |||||||||||||| |||| || |||||||||    
T  50497008 gtccctcaacttattttaatttctcagtttagttccttaactattaaatgttttaatttggtcctt 50497073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 172
Target Start/End: Complemental strand, 11822956 - 11822888
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||| |||||||||||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  11822956 ggtcccataacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtccttta 11822888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 19630778 - 19630834
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  19630778 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 19630834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 23752026 - 23752070
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaact 146  Q
    |||||||||||||||||||| || ||||||||| ||||| |||||    
T  23752026 ttggtcccttaacttatttttagatttcaatttggtcccctaact 23752070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 25764377 - 25764433
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  25764377 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 25764433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 141
Target Start/End: Complemental strand, 27410796 - 27410748
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtccct 141  Q
    |||||||| |||||| ||||||||| ||| ||||||||||||| |||||    
T  27410796 atacatcatttggtctcttaacttaattttagttttcaatttaatccct 27410748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 31208537 - 31208481
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  31208537 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 31208481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 32617640 - 32617584
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  32617640 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 32617584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 137
Target Start/End: Original strand, 33376219 - 33376263
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagt 137  Q
    |||||||| |||||| |||||||||||||  ||||||||||||||    
T  33376219 atacatcatttggtctcttaacttatttttggttttcaatttagt 33376263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 38371920 - 38371840
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| | |||| |||||||||||||| ||||||| |||  |||| ||||||  |||||| |||||||| ||| ||||    
T  38371920 atacatcattcggtctcttaacttattttctgttttcagtttgatcccctaactaaaaaacgtctcaaattgatcccttat 38371840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 133 - 208
Target Start/End: Original strand, 44217614 - 44217689
Alignment:
Q  133 ttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttatt 208  Q
    ||||| |||||| |||||||||||| || |||||| |||||| || ||| ||||| ||||||||| |||||||||||    
T  44217614 ttagttccttaattattaaacgttttaatttggtcttttatctttgttttcatca-tcaatttggtcctattttatt 44217689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 47244092 - 47244028
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||| ||||||| | || ||| | | |||||||||||||||||| |||||| |||||||||    
T  47244092 tcccttaatttattttaatttctcagtgtggtcccttaactattaaacatttcaatttggtcctt 47244028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 48413653 - 48413589
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||| | ||  || | | || |||||||||||||||||||||| |||||||||    
T  48413653 tcccttaacttattttaatttcccagtgtggttccttaactattaaacgtttcaatttggtcctt 48413589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 166
Target Start/End: Original strand, 52658921 - 52658985
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggt 166  Q
    ||||||||||||||||||||   |||||| ||| ||||| ||||||| ||| ||||||| |||||    
T  52658921 ttggtcccttaacttattttttattttcactttggtcccctaactataaaatgtttcaatttggt 52658985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 176
Target Start/End: Complemental strand, 54823330 - 54823290
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    ||||| |||||||||||||||| ||| ||||||||||||||    
T  54823330 gtcccataactattaaacgttttaaaatggtcctttatctt 54823290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 172
Target Start/End: Original strand, 55013759 - 55013827
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||| |||||||||||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  55013759 ggtcccataacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtccttta 55013827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 137; Significance: 3e-71; HSPs: 51)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 48338232 - 48338036
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||||||||||||||||||||||||||||| || || | |||||||||||||  ||||||||||||||||||||||||||||||||||    
T  48338232 atacatcatttggtcccttaacttattttcagttttcaatttggttccctgactattaaacgttctaaattggtcctttatcttctttccatcattcaat 48338133  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| |||||||||||||||||||||| ||| |||| ||||||| |||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  48338132 ttggtcctattttattcattttaaccaccaagaaaaggagaccgctggatatatgaggtctatcagatctaactgtgtatcaccaacacctgattta 48338036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 93 - 281
Target Start/End: Original strand, 48336348 - 48336536
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||| ||||||||||||||||||||||||||||| ||||  ||||||||||||||| ||||||| || ||||||||||||||||||||||||    
T  48336348 atacatcatttgctcccttaacttattttcagttttcaatttggtcctctaactattaaacgttccaaattgatcatttatcttctttccatcattcaat 48336447  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||| |||||||||||||||||||||  ||| |||| |||||||||||||| ||||||| ||| |||||||||||| ||||||||||||    
T  48336448 ttggtcctattttattcattttaacccccaagaaaaggagaccgttggataaatgaggtttattagatctaactgtgtatcaccaacac 48336536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 93 - 278
Target Start/End: Complemental strand, 14206895 - 14206711
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||| | |||||||||||| |||||||| ||||| ||||| ||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  14206895 atacattatttggtcccttaatttattttctgtttttaatttggtcctctaactattaaacgttttaaattggtcatttatcttctttccatcattcaat 14206796  T
Q  193 ttggccctattttattcattttaaccatcaat-aaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaa 278  Q
    |||| ||||||||||||||||||| |||| || ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  14206795 ttggtcctattttattcattttaa-catccataaaaatgaga-cgttggataaatgaggtctatcagatctaactgtgtatcaccaa 14206711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 93 - 278
Target Start/End: Complemental strand, 14214643 - 14214459
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||| | |||||||||||| |||||||| ||||| ||||| ||||  |||||||||||||||| ||||||||| ||||||||||||||||||||||||    
T  14214643 atacattatttggtcccttaatttattttctgtttttaatttggtcctctaactattaaacgttttaaattggtcatttatcttctttccatcattcaat 14214544  T
Q  193 ttggccctattttattcattttaaccatcaat-aaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaa 278  Q
    |||| ||||||||||||||||||| |||| || ||||||||| ||||||||| |||||||||||||||||||||||| |||||||||    
T  14214543 ttggtcctattttattcattttaa-catccataaaaatgaga-cgttggataaatgaggtctatcagatctaactgtgtatcaccaa 14214459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 105 - 217
Target Start/End: Original strand, 14213145 - 14213257
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattt 204  Q
    ||||||||| |||||||| ||||||||||| ||||| ||||||| |||||||| ||||||||||||||||||| |||||||||||||||||   ||||||    
T  14213145 gtcccttaatttattttctgttttcaatttggtcccctaactatcaaacgttttaaattggtcctttatcttccttccatcattcaatttgattctattt 14213244  T
Q  205 tattcattttaac 217  Q
    |||| ||||||||    
T  14213245 tatttattttaac 14213257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 136 - 289
Target Start/End: Complemental strand, 50003295 - 50003142
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatcttc-tttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagac 234  Q
    ||||| |||||||||||||||||||| ||||||||||| ||  |||  ||||| |||||||| ||||||||||| ||||||| |  |   ||||| ||||    
T  50003295 gtcccctaactattaaacgtttcaaaatggtcctttatgtttgttttaatcat-caatttggtcctattttattaattttaaactccttaaaaataagac 50003197  T
Q  235 cgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||||| | |||||| |||||||||||| || |||||||||||||| |||||    
T  50003196 cgttggataaaggaggtcaatcagatctaacggtgtatcaccaacacataattta 50003142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 405 - 473
Target Start/End: Original strand, 44945069 - 44945137
Alignment:
Q  405 accattgtcttcctccttttcagataaaatccaacggctatcaaaatcctcatcaaacgattcggagaa 473  Q
    |||||||| ||||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||||    
T  44945069 accattgtattcctccttttcagatacaatccaacggctatcaaaatcctcatcgaacgattcgtagaa 44945137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 142 - 281
Target Start/End: Original strand, 8895206 - 8895345
Alignment:
Q  142 taactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagaccgttgga 241  Q
    |||||| |||||||||||| |||||| ||| | || ||||| ||||||||||||| ||||||| ||| |||||||||  | | |||| |||| | | |||    
T  8895206 taactactaaacgtttcaatttggtcatttttattgtttccttcattcaatttggtcctatttcattaattttaaccccctaaaaaaggagatcatcgga 8895305  T
Q  242 tagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    || || |||||||||||||||||| || ||||||||||||    
T  8895306 taaattaggtctatcagatctaaccgtgtatcaccaacac 8895345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 50719656 - 50719781
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaac-gtttcaaattggtcctttatcttctttccatcattcaa 191  Q
    |||||||| ||||||| |||||||| ||    |||| || || |||| ||||||||||||| ||||||| |||||||||| |||| ||||||||||||||    
T  50719656 atacatcacttggtcctttaacttaattcttttttttaaattggtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaa 50719755  T
Q  192 tttggccctattttattcattttaac 217  Q
    |||||  |||||||||  ||||||||    
T  50719756 tttggttctattttatcaattttaac 50719781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 93 - 217
Target Start/End: Complemental strand, 50793192 - 50793067
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaac-gtttcaaattggtcctttatcttctttccatcattcaa 191  Q
    |||||||| ||||||| |||||||| ||    |||| || || |||| ||||||||||||| ||||||| |||||||||| |||| ||||||||||||||    
T  50793192 atacatcacttggtcctttaacttaattcttttttttaaattggtccattaactattaaaccgtttcaatttggtcctttgtcttgtttccatcattcaa 50793093  T
Q  192 tttggccctattttattcattttaac 217  Q
    |||||  |||||||||  ||||||||    
T  50793092 tttggttctattttatcaattttaac 50793067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 41387548 - 41387473
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| ||||||| ||| || |||| |||||||    
T  41387548 atacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaaatgtctcaatttggtcc 41387473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 103 - 170
Target Start/End: Original strand, 45730648 - 45730715
Alignment:
Q  103 tggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    ||||||||||||||||||| | || ||| ||| ||||||||||||||||||||||||| |||| ||||    
T  45730648 tggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggacctt 45730715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 50150733 - 50150844
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctatt 203  Q
    |||||||||||||||||| | || ||| ||| ||| ||||||||||||| ||||||| |||||||||    || ||| | ||| ||||||||| ||||||    
T  50150733 ggtcccttaacttattttaatttctcagtttggtcacttaactattaaatgtttcaatttggtccttgtctttgttttcgtca-tcaatttggtcctatt 50150831  T
Q  204 ttattcattttaa 216  Q
    ||||| |||||||    
T  50150832 ttattaattttaa 50150844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 54752617 - 54752693
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||| ||||||||||||||||||||   |||||||||||||||| ||||||| ||  || |||| ||||||||    
T  54752617 atacatcatttggtcccttaacttatttttcattttcaatttagtcccctaactataaagtgtctcaatttggtcct 54752693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 19579230 - 19579301
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    ||||||||||||||||||||||| ||||| ||| ||||| ||||||| ||| || |||| ||||||| ||||    
T  19579230 ttggtcccttaacttattttcagatttcattttggtcccctaactataaaatgtctcaatttggtccgttat 19579301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 25583115 - 25583190
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| || |||||||||||||||||   |||||| ||| ||||| |||||||||||||| |||| |||||||    
T  25583115 atacatcatttagtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcc 25583190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 11483093 - 11483047
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    ||||||||||||||||||||||| ||||| ||| |||||||||||||    
T  11483093 ttggtcccttaacttattttcagatttcattttggtcccttaactat 11483047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 33000904 - 33000838
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||| ||||||||||| | || ||| |||  |||||||||||||||||||||||| |||||||||    
T  33000904 ggtcccctaacttattttaatttctcagtttgatcccttaactattaaacgtttcaatttggtcctt 33000838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 39531920 - 39531854
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| |||| |||||||||||| ||| ||||||| |||||||||    
T  39531920 ggtcccttaacttattttaatttctcagtttaatcccttaactatgaaatgtttcaatttggtcctt 39531854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 216
Target Start/End: Original strand, 2088854 - 2088965
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttc-tttccatcattcaatttggccctat 202  Q
    |||||||||| ||||||| | || ||| ||  ||||||||| ||||||| ||||||| ||||||||| |||||  ||| |||||| |||||||| |||||    
T  2088854 ggtcccttaatttattttaatttctcagttaggtcccttaattattaaatgtttcaatttggtcctt-atctttgttttcatcat-caatttggtcctat 2088951  T
Q  203 tttattcattttaa 216  Q
    |||||| |||||||    
T  2088952 tttattaattttaa 2088965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 17350217 - 17350137
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||||||||||||||||  |||||||||||  |||| ||||||| ||  || |||| ||||||| ||||    
T  17350217 atacatcatttggtcccttaacttatttttggttttcaatttgttcccctaactataaagtgtctcaatttggtcccttat 17350137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 18024580 - 18024636
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||    
T  18024580 ttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 18024636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 42592415 - 42592471
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||    
T  42592415 ttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 42592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 1031828 - 1031891
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtc 167  Q
    |||||||||||||||||| | || ||| | | ||||||||||||||||| ||||||| ||||||    
T  1031828 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaatgtttcaatttggtc 1031891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 5416208 - 5416279
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    ||||||||||||||||||||| | ||||| ||| ||||| ||||||| ||| || |||| ||||||| ||||    
T  5416208 ttggtcccttaacttattttcggatttcattttggtcccctaactataaaatgtctcaatttggtcccttat 5416279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 19579400 - 19579329
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    ||||||||||||||||||||| | ||||| ||| ||||||||||||| ||  || |||| ||||||| ||||    
T  19579400 ttggtcccttaacttattttcggatttcattttggtcccttaactataaagtgtctcaatttggtcccttat 19579329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 176
Target Start/End: Original strand, 21247241 - 21247320
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||| |||||||||||||||| ||     |||||| || ||||| |||||||||||||||||||| |||||| |||||||    
T  21247241 atcatttggtcccttaacttaattctttatttcaaattggtcccctaactattaaacgtttcaaaatggtcccttatctt 21247320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 41386131 - 41386186
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||  ||||||||||||||||||||  ||||||||||| ||||| |||||||    
T  41386131 atacatcgtttggtcccttaacttatttttggttttcaatttggtcccctaactat 41386186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 42632707 - 42632762
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| |||||||||||||||| |||  ||||||||||| ||||| |||||||    
T  42632707 atacatcatttggtcccttaacttacttttggttttcaatttggtcccctaactat 42632762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 42634001 - 42633946
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||   |||||||||| ||||| |||||||    
T  42634001 atacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 42633946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 51825732 - 51825661
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||| ||||||||||||||||||||  | ||||| ||| ||||||||||||| ||  ||||||| |||||||    
T  51825732 atcatttggtcccttaacttatttttggatttcactttggtcccttaactataaagtgtttcaatttggtcc 51825661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 52293629 - 52293558
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    ||||||||||||||||||||| | ||||| ||| ||||| ||||||| ||  || |||| ||||||||||||    
T  52293629 ttggtcccttaacttattttcggatttcattttggtcccctaactataaagtgtctcaatttggtcctttat 52293558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 53808319 - 53808374
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||| ||||| ||||| ||| | |||||||    
T  53808319 atacatcatttggtcccttaacttattttcggttttgaatttggtctcctaactat 53808374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 54654081 - 54654026
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  | ||||| ||| |||||||||||||    
T  54654081 atacatcatttggtcccttaacttatttttggatttcattttggtcccttaactat 54654026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 108 - 170
Target Start/End: Original strand, 4067942 - 4068004
Alignment:
Q  108 ccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||| | || ||| |||| |||||||||||||||| |||| || |||||||||    
T  4067942 ccttaacttattttaatttatcagtttaatcccttaactattaaatgttttaatttggtcctt 4068004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 139 - 216
Target Start/End: Complemental strand, 27226608 - 27226531
Alignment:
Q  139 ccttaactattaaacgtttcaaattggtcctttat-cttctttccatcattcaatttggccctattttattcattttaa 216  Q
    |||||| || |||||||||||| ||||||||||||  || ||| ||||| ||||||||| ||||||||||| |||||||    
T  27226608 ccttaaataataaacgtttcaatttggtcctttatgtttgttttcatca-tcaatttggtcctattttattaattttaa 27226531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 39530807 - 39530873
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| | |  |||||||||||||||||||||||| ||| |||||    
T  39530807 ggtcccttaacttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttgatcctt 39530873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 176
Target Start/End: Original strand, 53901583 - 53901652
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||||||| ||||||| | || ||| ||||||||||||||||||||| |||| || ||||| |||||||||    
T  53901583 tcccttaatttattttaatttctcagtttagtcccttaactattaaatgttttaatttggt-ctttatctt 53901652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Original strand, 8371221 - 8371294
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggt 166  Q
    |||||||| ||| ||||||||||||||||  ||||||| ||| ||||| ||||||| ||| || |||| |||||    
T  8371221 atacatcatttgatcccttaacttattttttgttttcattttggtcccctaactataaaatgtctcaatttggt 8371294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 7583969 - 7584025
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||    ||||| ||| ||||||||||||||||| |||||    
T  7583969 ttggtcccttaacttatttttttgtttcattttggtcccttaactattaaaagtttc 7584025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 12062488 - 12062424
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||   |||||| ||| ||||||||||||||||  || |||| |||||||    
T  12062488 ggtcccttaacttattttattttttcagtttggtcccttaactattaagtgtctcaatttggtcc 12062424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 18024960 - 18024904
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  18024960 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 18024904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 18271020 - 18270964
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  18271020 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 18270964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 30267406 - 30267462
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  30267406 ttggtcccttaacttattttttgatttcgttttggtcccttaactattaaaagtttc 30267462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 30385196 - 30385252
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||| ||| ||||| ||||||||||| |||||    
T  30385196 ttggtcccttaacttattttttggtttcattttggtcccgtaactattaaaagtttc 30385252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 108 - 168
Target Start/End: Complemental strand, 35174482 - 35174422
Alignment:
Q  108 ccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||   |||||| ||| ||||||||||||||||  |||||||| ||||||    
T  35174482 ccttaacttattttattttttcattttggtcccttaactattaagtgtttcaaaatggtcc 35174422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 38771661 - 38771605
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  38771661 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 38771605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 39133018 - 39133098
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||| || |||||||||||||  ||||||||||| ||||| ||||||| ||  || |||| ||||||| ||||    
T  39133018 atacatcatttgatctcttaacttatttttggttttcaatttggtcccctaactataaagtgtctcaatttggtcccttat 39133098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 104 - 168
Target Start/End: Complemental strand, 48867534 - 48867470
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||   || ||||||| ||||||||||||||||  || |||| |||||||    
T  48867534 ggtcccttaacttattttattttctcaatttggtcccttaactattaagtgtgtcaatttggtcc 48867470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 170
Target Start/End: Complemental strand, 50765880 - 50765812
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||| ||||||| | || ||| |||  ||  |||||||||||||||||||| |||||||||    
T  50765880 ttggtcccttaatttattttaatttctcagtttgatcttttaactattaaacgtttcaatttggtcctt 50765812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 51891343 - 51891287
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  51891343 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 51891287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 4e-64; HSPs: 47)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 11081147 - 11080951
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||| ||||||||||||||||| ||||||||||| ||||  ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  11081147 atacatcatttgatcccttaacttattttctgttttcaatttggtcctctaactattaaacgttccaaattggtcctttatcttctttccatcattcaat 11081048  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| ||||||| |||||||||||||   || |||| |||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  11081047 ttggtcctatttcattcattttaacctcaaaaaaaaggagacctttggataaatgaggtctatcagatctaactgtgtatcaccaacacctgattta 11080951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 109 - 289
Target Start/End: Original strand, 42307513 - 42307692
Alignment:
Q  109 cttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttatt 208  Q
    |||||||||||||| ||||||||||| ||||| |||||||||||  ||||||||| ||| |||||||||||||||||||| ||||| | |||||||||||    
T  42307513 cttaacttattttctgttttcaatttggtcccctaactattaaatatttcaaattagtcatttatcttctttccatcatttaatttagacctattttatt 42307612  T
Q  209 cattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||||||| |  ||| ||||||||| | ||||||| || |||||||||| |||||| ||| |||||| ||||  |||||||    
T  42307613 cattttaatccacaa-aaaatgagatcattggataaataaggtctatcatatctaattgtgtatcactaacatctgattta 42307692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 93 - 215
Target Start/End: Complemental strand, 42314931 - 42314809
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||| | |||||| ||||||||  ||||||||||  | || ||||||||||||||||||||||||| ||||||||||||||| |||||||||    
T  42314931 atacatcatttgattccttaatttattttctattttcaatttgattccctaactattaaacgtttcaaattggttctttatcttctttccttcattcaat 42314832  T
Q  193 ttggccctattttattcatttta 215  Q
    |||| |  |||||||||||||||    
T  42314831 ttggtctcattttattcatttta 42314809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 93 - 281
Target Start/End: Complemental strand, 35463104 - 35462916
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    ||||||| |||||||| ||||||||||||   || ||| |||  |||||||||||| ||| || |||||||||||||||||||   ||   | | | |||    
T  35463104 atacatccgttggtcctttaacttattttattttctcagtttgatcccttaactataaaatgtctcaaattggtcctttatctgtgttttgttagtaaat 35463005  T
Q  193 ttggccctattttattcattttaac-catcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||| |||||||| || |||||||| |||  | |||| |||| ||||||||| |||||||||||| |||||||| || ||||||||||||    
T  35463004 ttggtcctattttgttaattttaactcattta-aaaaggagatcgttggataaatgaggtctatctgatctaacagtgtatcaccaacac 35462916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 16346112 - 16346177
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    ||||||||||||||||| | || ||| ||| ||||||||||||||||||||||||| |||||||||    
T  16346112 gtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcctt 16346177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 31623907 - 31623982
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| ||||||| ||  ||||||| |||||||    
T  31623907 atacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcc 31623982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 102 - 173
Target Start/End: Complemental strand, 39325940 - 39325869
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    ||||||||||||||||||||| ||| ||| ||||||||| ||||||  |||||||| |||||||||| ||||    
T  39325940 ttggtcccttaacttattttctgttctcattttagtcccctaactaaaaaacgttttaaattggtcccttat 39325869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 108 - 170
Target Start/End: Complemental strand, 9190542 - 9190480
Alignment:
Q  108 ccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||| | || ||| ||||||||||||||||||||| ||||||| |||||||||    
T  9190542 ccttaacttattttaatttctcagtttagtcccttaactattaaatgtttcaatttggtcctt 9190480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 93 - 274
Target Start/End: Original strand, 35462668 - 35462849
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    ||||||| |||||||| ||||||||||||   || ||| |||  |||||||||| | ||| || |||||||||||||||||||   ||   | | | |||    
T  35462668 atacatctgttggtcctttaacttattttattttctcagtttgatcccttaactgtaaaatgtctcaaattggtcctttatctgtgttttgttagtaaat 35462767  T
Q  193 ttggccctattttattcattttaac-catcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatca 274  Q
    |||| |||||||| || |||||||| |||  | |||| |||||||||||||| | ||||||||||||||||||| || |||||    
T  35462768 ttggtcctattttgttaattttaactcattta-aaaaggagaccgttggataaacgaggtctatcagatctaaccgtgtatca 35462849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 104 - 216
Target Start/End: Complemental strand, 23768589 - 23768478
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctat 202  Q
    ||||||||||||||||||   |||||| ||| ||||||| ||||||||| |||| |||||||||| ||||| || ||| | ||| ||||||||| |||||    
T  23768589 ggtcccttaacttattttagtttttcagtttggtcccttcactattaaatgttttaaattggtcc-ttatctttgttttcgtca-tcaatttggtcctat 23768492  T
Q  203 tttattcattttaa 216  Q
    |||||| |||||||    
T  23768491 tttattaattttaa 23768478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 165
Target Start/End: Complemental strand, 38790368 - 38790296
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattgg 165  Q
    |||||||||||| |||||||||||||||||  |||||| ||| || || |||||||||||||| |||| ||||    
T  38790368 atacatcagttgatcccttaacttattttcgtttttcattttggttccctaactattaaacgtctcaatttgg 38790296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 167
Target Start/End: Original strand, 12818766 - 12818829
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtc 167  Q
    |||||||||||||||||| | || ||| ||| |||||||||||||||||| |||||| ||||||    
T  12818766 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacatttcaatttggtc 12818829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 360 - 399
Target Start/End: Original strand, 16497115 - 16497154
Alignment:
Q  360 cttcaacaaaaactacaaaatcaaacatttaaatttataa 399  Q
    ||||||||||||| ||||||||||||||||||||||||||    
T  16497115 cttcaacaaaaaccacaaaatcaaacatttaaatttataa 16497154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 35945552 - 35945497
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||| | ||||||||||||||||||||  ||||||| |||||||||||||||||    
T  35945552 atacattatttggtcccttaacttattttttgttttcattttagtcccttaactat 35945497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 36756065 - 36756120
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| |||||||||||||||||||| |||||| ||||| ||||| |||||||    
T  36756065 atacatcatttggtcccttaacttatttttagtttttaatttggtcccataactat 36756120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 43416079 - 43416000
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||| |||||||||||||||| ||    ||||| | || |||||||||||||||||||||||||| ||||| ||||||||    
T  43416079 atcaattggtcccttaacttaattctttttttcgaattggtcccttaactattaaacgtttcaaaatggtcttttatctt 43416000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 9189406 - 9189472
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||| ||||||| | || ||| | | ||||||||||||||||||||||||| |||||||||    
T  9189406 ggtcccttaatttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtcctt 9189472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 11080845 - 11080795
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||| ||||    
T  11080845 aacttcaacaaaaaccacataatcaaacctttaaatttataattaacacca 11080795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 281
Target Start/End: Complemental strand, 12820202 - 12820026
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctat 202  Q
    ||||||| |||||||||| | || ||| ||  |||||||||||||||||||||| || ||||||| ||||| || ||| | ||  || |||||| |||||    
T  12820202 ggtccctaaacttattttaatttctcagttcggtcccttaactattaaacgttttaatttggtcc-ttatctttgttttcgtc-gtcgatttggtcctat 12820105  T
Q  203 tttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||||| |||||||   ||   ||||  ||||||||||||| | |||||  |||| |||||||||| ||||||||||||    
T  12820104 tttattaattttaaatctctcaaaaagaagaccgttggataaaggaggttcatcatatctaactgtgtatcaccaacac 12820026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 22914294 - 22914228
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | |||||| |||  ||| |||||||||||||||||||| ||| |||||    
T  22914294 ggtcccttaacttattttaatttttcagtttgatccattaactattaaacgtttcaatttgatcctt 22914228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 289
Target Start/End: Complemental strand, 41767236 - 41767083
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagac 234  Q
    ||||| |||||||||||||||||||| |||||| ||||| || |||   ||||| | ||||| ||||||||||| ||||||| | ||   ||||  ||||    
T  41767236 gtcccctaactattaaacgtttcaaaatggtcccttatctttattttagtcatt-attttggtcctattttattaattttaaacctcttaaaaagaagac 41767138  T
Q  235 cgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
     |||||||  | |||||| ||| |||||||| || |||||||||||||| |||||    
T  41767137 tgttggattaaggaggtccatcggatctaacggtgtatcaccaacacataattta 41767083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 136 - 208
Target Start/End: Original strand, 43414425 - 43414497
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatct-tctttccatcattcaatttggccctattttatt 208  Q
    ||||| |||||||||||||||||||| ||||||||||||| | ||| ||||| |||||||||  ||||||||||    
T  43414425 gtcccctaactattaaacgtttcaaaatggtcctttatctatgttttcatca-tcaatttggtactattttatt 43414497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 216
Target Start/End: Original strand, 4534047 - 4534157
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctatt 203  Q
    ||||||||||||||||| | || ||| ||| |||| |||| ||||||| ||||||| ||||||| ||||| || ||| | ||| ||||||||| ||||||    
T  4534047 gtcccttaacttattttaatttctcagtttggtcctttaaatattaaatgtttcaatttggtcc-ttatctttgttttcgtca-tcaatttggtcctatt 4534144  T
Q  204 ttattcattttaa 216  Q
    ||||| |||||||    
T  4534145 ttattaattttaa 4534157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 10053859 - 10053779
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| || |||||||||||||||||  ||||||| ||| ||||||||||||| ||  || |||| ||||||| ||||    
T  10053859 atacatcatttagtcccttaacttatttttggttttcactttggtcccttaactataaagtgtctcaagttggtcccttat 10053779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 358 - 398
Target Start/End: Original strand, 42307778 - 42307818
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttata 398  Q
    ||||||||||||||| ||| |||||||||||||||||||||    
T  42307778 aacttcaacaaaaaccacataatcaaacatttaaatttata 42307818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 104 - 159
Target Start/End: Complemental strand, 162704 - 162649
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttca 159  Q
    |||||||||||||||||| || ||||  ||| ||||||||||||||||| ||||||    
T  162704 ggtcccttaacttatttttaggtttcgttttggtcccttaactattaaaagtttca 162649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 13360363 - 13360434
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||||||||||||||| || ||||| ||| ||||| ||| ||  |||||| |||||||||||| ||||    
T  13360363 ttggtcccttaacttatttttagatttcattttcgtcccctaattaaaaaacgtctcaaattggtcccttat 13360434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 38591122 - 38591067
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||   |||||||||| ||||| |||||||    
T  38591122 atacatcatttggtcccttaacttatttttgattttcaatttggtcccctaactat 38591067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 39544931 - 39544986
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||| ||||||| | | ||| |||||||||    
T  39544931 atacatcatttggtcccttaacttattttctgttttcactctggtcgcttaactat 39544986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 41868031 - 41867976
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| |||||||||||| ||||||| |||||||| ||| ||||| |||||||    
T  41868031 atacatcatttggtcccttaatttatttttagttttcactttggtcccctaactat 41867976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 43386817 - 43386742
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||  |||||||||||||||||||  ||||||| ||| ||||| ||||||| ||| || |||| |||||||    
T  43386817 atacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcc 43386742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 168
Target Start/End: Complemental strand, 2421395 - 2421333
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||||||||||| | || ||| ||||||||||||| ||||||  ||||||| |||||||    
T  2421395 tcccttaacttattttaatttatcagtttagtcccttaaatattaagtgtttcaatttggtcc 2421333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 7561809 - 7561875
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||||  | ||||||||| ||||||||||| | ||  || ||||||||||||    
T  7561809 ttggtcccttaacttatttttggatttcaatttggtcccttaactttaaattgtctcaaattggtcc 7561875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 19915012 - 19914966
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||||    
T  19915012 ttggtcctttaacttattttgggttttcaatttggtcccttaactat 19914966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 21524700 - 21524634
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| ||||||  |||||||    
T  21524700 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtcc 21524634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 35182143 - 35182074
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| ||||||  |||||||||||    
T  35182143 ttggtcccttaacttactttttggtttca-tttggtcccttaactattaaaagtttcattttggtccttta 35182074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 231 - 289
Target Start/End: Complemental strand, 44770591 - 44770533
Alignment:
Q  231 agaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||||||||| |||||||||||| |||||||| || ||| ||| |||||| |||||    
T  44770591 agaccgttggataaatgaggtctatcggatctaacagtgtataaccgacacataattta 44770533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 146
Target Start/End: Complemental strand, 3237755 - 3237702
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaact 146  Q
    |||||||| ||||||||||||||||||||  | ||||| ||||||||| |||||    
T  3237755 atacatcatttggtcccttaacttatttttggatttcattttagtcccctaact 3237702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 166
Target Start/End: Complemental strand, 36940148 - 36940075
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggt 166  Q
    |||||||| ||||||||||||||||||||  ||||||| |||  |||| ||||||| ||  ||||||| |||||    
T  36940148 atacatcatttggtcccttaacttatttttggttttcactttgatcccctaactataaagtgtttcaatttggt 36940075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 4325957 - 4325901
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  4325957 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 4325901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 4326017 - 4325961
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  4326017 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 4325961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 5876879 - 5876823
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  5876879 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 5876823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 12849979 - 12850035
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  12849979 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 12850035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 29802175 - 29802231
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  29802175 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 29802231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 37474151 - 37474075
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||| ||  |||||||||||||||   ||||||||||| ||||||||||||| ||  || |||| ||||||||    
T  37474151 atacatcatttcatcccttaacttatttatggttttcaatttggtcccttaactataaagtgtctcaatttggtcct 37474075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 109 - 169
Target Start/End: Original strand, 43579697 - 43579757
Alignment:
Q  109 cttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||||||||   || ||| || |||||||||||||||||| ||||||| ||||||||    
T  43579697 cttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcct 43579757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 45467452 - 45467508
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  45467452 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 45467508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 125; Significance: 4e-64; HSPs: 57)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 105 - 289
Target Start/End: Original strand, 4973526 - 4973710
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattt 204  Q
    |||||||||||||||||||||||||||||| |||| ||||||||||||||||  |||||||| ||||||||||||| |||| |||||||||| |||||||    
T  4973526 gtcccttaacttattttcagttttcaatttggtcctttaactattaaacgttctaaattggttctttatcttcttttcatcgttcaatttggtcctattt 4973625  T
Q  205 tattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||||| |||| |||| ||||||||||||||||||||||||||||||||| |||||||||| |||||||||||  |||||||    
T  4973626 tattcatttgaaccctcaagaaaatgagaccgttggatagatgaggtctatcatatctaactgtgtatcaccaacatgtgattta 4973710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 105 - 289
Target Start/End: Complemental strand, 4974152 - 4973968
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattt 204  Q
    ||||||||| ||||||||| ||||||||||  || |||||||||||||||||| |||||||| |||||||||||||||||| |||||||||| || ||||    
T  4974152 gtcccttaatttattttcaattttcaatttgatctcttaactattaaacgttttaaattggttctttatcttctttccatcgttcaatttggtccaattt 4974053  T
Q  205 tattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||||||||||  ||| |||| |||||||||||||||||||| |||||||||||||||||| ||||||| ||||||||||||    
T  4974052 tattcattttaacccccaagaaaaggagaccgttggatagatgagatctatcagatctaactgtgtatcaccgacacatgattta 4973968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 22794436 - 22794241
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||  ||||||||||||||||||| | ||||||||||| ||||| ||||||||||||||| ||||||| |||||||||||| ||||||| ||||||    
T  22794436 atacatcgtttggtcccttaacttattt-ctgttttcaatttggtcccctaactattaaacgttccaaattgttcctttatcttccttccatccttcaat 22794338  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| |||||||||||||||||||||  ||| |||| |||| ||||||||| |||||||||||||||||||| ||| |||||||||||  |||||||    
T  22794337 ttggtcctattttattcattttaacccccaaaaaaaggagatcgttggataaatgaggtctatcagatctaattgtgtatcaccaacatctgattta 22794241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 102 - 281
Target Start/End: Original strand, 29656999 - 29657179
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggcccta 201  Q
    ||||||||||||||||||||||||||||||||| ||||| |||||||||||||||  |||||||||||||||| ||| ||||||||||||||||  ||||    
T  29656999 ttggtcccttaacttattttcagttttcaatttggtcccctaactattaaacgttcaaaattggtcctttatcatctctccatcattcaatttgatccta 29657098  T
Q  202 ttttattcattttaaccatcaataa-aatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||||| |||||||||  ||| || || |||||||||||||| |||||  ||||||||||||||||| ||||||||||||    
T  29657099 ttttattaattttaacccccaaaaacaacgagaccgttggataaatgagaactatcagatctaactgtgtatcaccaacac 29657179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 105; E-Value: 3e-52
Query Start/End: Original strand, 106 - 289
Target Start/End: Original strand, 32893470 - 32893654
Alignment:
Q  106 tcccttaacttatttt-cagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattt 204  Q
    |||||||||||||||| ||||||| ||||| ||| |||||||| ||||||||  |||||| ||||||||||||||||||||||||||||||| | |||||    
T  32893470 tcccttaacttatttttcagtttttaatttggtctcttaactagtaaacgttctaaattgatcctttatcttctttccatcattcaatttggtcttattt 32893569  T
Q  205 tattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||||||||||  ||| |||| ||||||||||||||  || |||||||||||||||||||| |||||||||||| |||||||    
T  32893570 tattcattttaacccccaagaaaaggagaccgttggataagtgtggtctatcagatctaactgtgtatcaccaacacttgattta 32893654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 29658728 - 29658533
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||  |||||||||||| |||||||||||||||||  ||||||||||||| || |||||||||||||||||||||| |||||||| ||    
T  29658728 atacatcatttggtcatttaacttatttttagttttcaatttagtcctctaactattaaacggtttaaattggtcctttatcttcttttcatcattctat 29658629  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||  |||||||||||||||||||||  ||| |||| |||||| ||||||| || ||||||||||||||||| ||| || ||||||| | |||||||    
T  29658628 ttgatcctattttattcattttaacccccaa-aaaaggagaccattggataaataaggtctatcagatctaattgtgtaccaccaacgcctgattta 29658533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 97 - 280
Target Start/End: Complemental strand, 32894908 - 32894724
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttgg 196  Q
    |||| |||||||||||||||||||||| ||||||||||  |||  ||||||||||| |||| ||||||||| ||||||||||| |||||||| |||||||    
T  32894908 atcatttggtcccttaacttattttcaattttcaatttgatcctctaactattaaaagttttaaattggtcatttatcttcttcccatcattaaatttgg 32894809  T
Q  197 ccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatct-aactgtatatcaccaaca 280  Q
     |||||||||||||||| |||| |||| ||||  ||||||||||||| ||||| |||||||||| | || ||| |||||||||||    
T  32894808 tcctattttattcatttaaaccctcaagaaaagaagaccgttggataaatgagatctatcagatttaaagtgtgtatcaccaaca 32894724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 93 - 281
Target Start/End: Complemental strand, 47536965 - 47536777
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttc-tttccatcattcaa 191  Q
    |||||||  |||||||||||||||| ||    ||||| | || ||||| ||||||||||||  || ||||||||||||||||||  |||  ||||| |||    
T  47536965 atacatcgtttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacactttaaattggtcctttatctttgtttttatcat-caa 47536867  T
Q  192 tttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||| ||||||||||| ||||||| | ||   ||||  ||||||||||||| | ||||||||||||||||||  || ||||||||||||    
T  47536866 tttggtcctattttattgattttaaacttctcaaaaagaagaccgttggataaaagaggtctatcagatctaatggtgtatcaccaacac 47536777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 139 - 289
Target Start/End: Original strand, 40321116 - 40321266
Alignment:
Q  139 ccttaactattaaacgtttcaaattggtcctttatcttc-tttccatcattcaatttggccctattttattcattttaaccatcaataaaatga-gaccg 236  Q
    ||||||||||||||||||||||| || |||||||||||  |||  ||||| |||||||| ||| ||||||| |||||||  |||| ||||| || |||||    
T  40321116 ccttaactattaaacgtttcaaaatgatcctttatctttgttttaatcat-caatttgggccttttttattaattttaaa-atcattaaaaagaagaccg 40321213  T
Q  237 ttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||| | |||||| || ||||||||| || |||||||||||||| |||||    
T  40321214 ttggataaaggaggtccattagatctaacagtgtatcaccaacacataattta 40321266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 125 - 216
Target Start/End: Original strand, 47535692 - 47535783
Alignment:
Q  125 ttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaa 216  Q
    ||||||| |||||||| ||||||||||||||||||| ||||||||||||| || |||  |||| ||||||||| ||||||||||| |||||||    
T  47535692 ttttcaaattagtcccctaactattaaacgtttcaatttggtcctttatctttgtttttatca-tcaatttggtcctattttattaattttaa 47535783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 22744747 - 22744823
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||| ||||||||||||||||||||   |||||||||||||||| ||||||| ||  ||||||| ||||||||    
T  22744747 atacatcatttggtcccttaacttatttttgattttcaatttagtcccctaactataaagtgtttcaatttggtcct 22744823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 22061910 - 22061835
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| || |||||||||||||||||  ||||||||||| ||||| ||||||| |||||| |||| |||||||    
T  22061910 atacatcattttgtcccttaacttattttgtgttttcaatttggtcccctaactataaaacgtctcaatttggtcc 22061835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 43006386 - 43006461
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| ||||||||||  || |||| |||||||    
T  43006386 atacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactattaagtgtctcaatttggtcc 43006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 231 - 289
Target Start/End: Original strand, 42520360 - 42520418
Alignment:
Q  231 agaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||||||||| | ||||||||||||||||||| || |||||||||||||| |||||    
T  42520360 agaccgttggataaaggaggtctatcagatctaacggtgtatcaccaacacataattta 42520418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 47537144 - 47537078
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| ||| ||||||||||||||||| ||||||| |||||||||    
T  47537144 ggtcccttaacttattttaacttctcagtttggtcccttaactattaaatgtttcaatttggtcctt 47537078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 358 - 402
Target Start/End: Complemental strand, 4973866 - 4973822
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataatta 402  Q
    ||||| ||||||||| |||||||||||||||||||||||||||||    
T  4973866 aacttgaacaaaaaccacaaaatcaaacatttaaatttataatta 4973822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 97 - 169
Target Start/End: Original strand, 43930324 - 43930396
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||| ||||||||||||||||||||   |||||| ||| ||||| |||||||||||||| |||| ||||||||    
T  43930324 atcatttggtcccttaacttatttttgattttcactttggtcccctaactattaaacgtctcaatttggtcct 43930396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Complemental strand, 4858459 - 4858384
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| |||||||||||||||||||| |||||||| |||  |||| ||||||| ||| || |||| |||||||    
T  4858459 atacatcatttggtcccttaacttatttttagttttcactttgatcccctaactataaaatgtctcaatttggtcc 4858384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 14109180 - 14109109
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||| |||||||||||||||||||| | |||||| ||| ||||||||||||| ||| || ||||| ||||||    
T  14109180 atcatttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcc 14109109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 168
Target Start/End: Complemental strand, 14419137 - 14419066
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||| |||||||||||||||||||| | |||||| ||| ||||||||||||| ||| || ||||| ||||||    
T  14419137 atcatttggtcccttaacttatttttaattttcactttggtcccttaactataaaatgtctcaaactggtcc 14419066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 25153659 - 25153714
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| |||||||||||||||||||||  |||||||||| ||||| |||||||    
T  25153659 atacatcatttggtcccttaacttattttcgattttcaatttggtcccctaactat 25153714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 25155051 - 25154996
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  |||||||||||  ||||||||||||    
T  25155051 atacatcatttggtcccttaacttatttttggttttcaatttgatcccttaactat 25154996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 43704563 - 43704484
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||| |||||||||||||||| ||    ||||| | || ||||| |||||||||||||||||||| ||||||||||||||    
T  43704563 atcatttggtcccttaacttaattatttttttcgaattggtcccctaactattaaacgtttcaaaatggtcctttatctt 43704484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 22794154 - 22794104
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||| ||||    
T  22794154 aacttcaacaaaaaccacataatcaaacctttaaatttataattaacacca 22794104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 231 - 281
Target Start/End: Original strand, 29408385 - 29408435
Alignment:
Q  231 agaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||| ||||||| ||||||||||||||||||||| || ||||||||||||    
T  29408385 agaccattggataaatgaggtctatcagatctaacggtgtatcaccaacac 29408435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 29657293 - 29657343
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||| | | |||||||||||||||||||||||||||| ||||    
T  29657293 aacttcaacaaaatccaaaaaatcaaacatttaaatttataattaacacca 29657343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 32893732 - 32893782
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| |||||||| || |||||||||||||||||| ||||    
T  32893732 aacttcaacaaaaaccacaaaatcgaaaatttaaatttataattaacacca 32893782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 33071742 - 33071676
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| |||||| |||||||||||||| ||||||| ||| |||||    
T  33071742 ggtcccttaacttattttaatttctcagtttagttccttaactattaaatgtttcaatttgatcctt 33071676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 38002620 - 38002546
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||||| |||||||||||||||| ||||| ||| ||||||||||||| ||  || |||| ||||||| |||||||    
T  38002620 ttggtctcttaacttattttcagatttcattttggtcccttaactataaagtgtctcaatttggtcccttatctt 38002546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 40881103 - 40881169
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| | | |||||||||||||||| |||||||| |||||||||    
T  40881103 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcctt 40881169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 47927391 - 47927457
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||| ||||||||||||| | || ||| ||||||||||||||||||||| ||||| | |||||||||    
T  47927391 ggtctcttaacttattttaatttctcagtttagtcccttaactattaaatgtttcgatttggtcctt 47927457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 93 - 170
Target Start/End: Original strand, 7146782 - 7146858
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||  ||||||||| ||||||||||| ||||||||||| ||||| ||||||| ||  ||||||| |||||||||    
T  7146782 atacatcgtttggtccct-aacttattttctgttttcaatttggtcccctaactataaagtgtttcaatttggtcctt 7146858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 47928533 - 47928468
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    ||||||||||||||||| | || | | ||||||| ||||||||||||| ||||||| |||||||||    
T  47928533 gtcccttaacttattttaatttcttagtttagtctcttaactattaaatgtttcaatttggtcctt 47928468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 225 - 281
Target Start/End: Complemental strand, 29409221 - 29409165
Alignment:
Q  225 aaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||| |||||||||||||| ||||| ||||||||||||||| || ||| ||||||||    
T  29409221 aaaaggagaccgttggataaatgagatctatcagatctaacagtgtataaccaacac 29409165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 19105642 - 19105587
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgttt 157  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| ||||    
T  19105642 ttggtcccttaacttattttttgatttcattttggtcccttaactattaaaagttt 19105587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 22746435 - 22746380
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||| | ||||||| ||||||||||||  ||||||||||||||||| |||||||    
T  22746435 atacattatttggtcctttaacttattttttgttttcaatttagtcccctaactat 22746380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 97 - 176
Target Start/End: Complemental strand, 36585016 - 36584937
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||| |||||||||||||||| ||    ||||| | || ||||| |||||||||||| ||||||| ||||||||||||||    
T  36585016 atcatttggtcccttaacttaattctttttttcgaattggtcccctaactattaaacatttcaaaatggtcctttatctt 36584937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 41126249 - 41126320
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    ||||||||||||||||||||||| ||||| ||| ||||| ||||||| ||  || |||| ||||||| ||||    
T  41126249 ttggtcccttaacttattttcagatttcattttggtcccctaactataaagtgtctcaatttggtcccttat 41126320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 140
Target Start/End: Complemental strand, 44114770 - 44114723
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtccc 140  Q
    |||||||| |||||||||||||||||||| |||||||| ||| |||||    
T  44114770 atacatcatttggtcccttaacttatttttagttttcattttggtccc 44114723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 46675049 - 46674994
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||| ||||||||||||||||  |||||||||||  ||||||||||||    
T  46675049 atacatcatttgatcccttaacttatttttggttttcaatttgatcccttaactat 46674994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 19069995 - 19069929
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||||  | ||||| ||| |||||||||||||| || ||||||  |||||||    
T  19069995 ttggtcccttaacttattttttggtttcattttggtcccttaactattgaaagtttcattttggtcc 19069929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 136 - 281
Target Start/End: Complemental strand, 23153702 - 23153557
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagac 234  Q
    ||||| ||||||||||||||||||| |||||| |||||| || |||  |||| |||||||   | ||||||||| ||||||| | ||   ||||  ||||    
T  23153702 gtcccctaactattaaacgtttcaatttggtcatttatctttgtttttatca-tcaatttaatcatattttattaattttaaacctctcaaaaagaagac 23153604  T
Q  235 cgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
     |||||||| | |||||| |||||||||||| || |||||| |||||    
T  23153603 tgttggataaaggaggtccatcagatctaacggtgtatcactaacac 23153557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 29344176 - 29344242
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| |||   |||||||||||||||||||| || |||||||||    
T  29344176 ggtcccttaacttattttaatttctcagtttgaccccttaactattaaacgttttaatttggtcctt 29344242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 93 - 139
Target Start/End: Complemental strand, 35128277 - 35128231
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcc 139  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||    
T  35128277 atacatcatttggtcccttaacttatttttggttttcaatttggtcc 35128231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 225 - 283
Target Start/End: Complemental strand, 42521241 - 42521183
Alignment:
Q  225 aaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacat 283  Q
    ||||| ||||||||||||| | |||||| ||| |||||||| || ||||||||||||||    
T  42521241 aaaataagaccgttggataaaggaggtccatcggatctaacagtgtatcaccaacacat 42521183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 40918146 - 40918101
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaa 403  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||    
T  40918146 aacttcaacaaaaaccacataatcaaacctttaaatctataattaa 40918101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 11687430 - 11687374
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||    ||||| ||| ||||||||||||||||| |||||    
T  11687430 ttggtcccttaacttattttttagtttcattttggtcccttaactattaaaagtttc 11687374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 14107833 - 14107913
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||  ||||||||||||  ||||||| ||| ||||||||||||| ||  || ||||| |||||| ||||    
T  14107833 atacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttat 14107913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 14417790 - 14417870
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||  ||||||||||||  ||||||| ||| ||||||||||||| ||  || ||||| |||||| ||||    
T  14417790 atacatcatttggtcatttaacttatttttggttttcattttggtcccttaactataaagtgtctcaaagtggtcccttat 14417870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 18670618 - 18670538
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||  ||||||||||||||||||||  | ||| | ||| ||||||||||| | ||| || |||||||||||| ||||    
T  18670618 atacatcctttggtcccttaacttatttttggattttattttggtcccttaactttaaaatgtctcaaattggtcccttat 18670538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 23350990 - 23351046
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  23350990 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 23351046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 23351050 - 23351106
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  23351050 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 23351106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 33070649 - 33070688
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    ||||||||||||||||||||||||| ||||| |||||||||    
T  33070649 gtcccttaactattaaacgtttcaatttggt-ctttatctt 33070688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 36701373 - 36701429
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  36701373 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 36701429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Original strand, 36702787 - 36702831
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaact 146  Q
    |||||||||||||||||||| || ||||| ||| |||||||||||    
T  36702787 ttggtcccttaacttatttttagatttcattttggtcccttaact 36702831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 36783044 - 36782984
Alignment:
Q  98 tcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||||||  | || |  ||| ||||||||||||||||| |||||    
T  36783044 tcagttggtcccttaacttattttttggttacgttttggtcccttaactattaaaagtttc 36782984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 169
Target Start/End: Complemental strand, 40926634 - 40926558
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||| || |||||||||||||||||  ||||||| ||| ||||| ||||||| ||  || |||| ||||||||    
T  40926634 atacatcatttagtcccttaacttatttttggttttcactttggtcccctaactataaagtgtctcaatttggtcct 40926558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 122; Significance: 2e-62; HSPs: 33)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 49619934 - 49619737
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| |||||||||||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  49619934 atacatcatttggtcccttaatttattttcagttttcaatttggtcccctaactattaaacgttccaaattggtcctttatcttctttccatcattcaat 49619835  T
Q  193 ttgg-ccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| || | ||||||||||||||||| | || |||| |||||| || |||| |||||||||||||||| ||||||| |||||||||||| |||||||    
T  49619834 ttggtcctttttttattcattttaaccctaaaaaaaaggagaccattagataaatgaggtctatcagatttaactgtgtatcaccaacacctgattta 49619737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 109 - 289
Target Start/End: Original strand, 49618448 - 49618628
Alignment:
Q  109 cttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttatt 208  Q
    |||||||||||||||||||||| ||| ||||| |||||||||||||||| ||||||||  |||||||||||||||||||||||||||| | |||||||||    
T  49618448 cttaacttattttcagttttcattttggtcccctaactattaaacgttttaaattggtgttttatcttctttccatcattcaatttggtcatattttatt 49618547  T
Q  209 cattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    ||||||||||  ||| |||| |||||||||||||| |||||||||||||||||||||||  |||||||||||| |||||||    
T  49618548 cattttaacccccaaaaaaaggagaccgttggataaatgaggtctatcagatctaactgagtatcaccaacacttgattta 49618628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 93 - 281
Target Start/End: Complemental strand, 52439400 - 52439212
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||||||||||||||||| ||||||||||| ||||  ||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  52439400 atacatcatttggtcccttaacttattttctgttttcaatttggtcctctaactattaaacgtttcaaattgatcctttatcttctttccatcattcaat 52439301  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||  |||||||||||||||||||   ||  |||| |||| ||||||||| |||| ||||||||||||||||||| ||||||||||||    
T  52439300 ttggttctattttattcattttaacacccataaaaaggagatcgttggataaatgaagtctatcagatctaactgtgtatcaccaacac 52439212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 103 - 289
Target Start/End: Original strand, 40778383 - 40778569
Alignment:
Q  103 tggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctat 202  Q
    |||| ||||||||||||||||||||| ||||| |||||||||||||||||||||  |||||||| ||||||||||||||| ||||||||||||| |||||    
T  40778383 tggttccttaacttattttcagtttttaatttggtcccttaactattaaacgttctaaattggttctttatcttctttccttcattcaatttggtcctat 40778482  T
Q  203 tttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||||| ||||||||| |||| |||| |||||||||||||| ||||||||||| |||||||||||| |||||||  ||| |||||||    
T  40778483 tttatttattttaaccctcaagaaaaggagaccgttggataaatgaggtctattagatctaactgtgtatcaccggcacctgattta 40778569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 40779758 - 40779562
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||  |||||||||||| ||||||||||||||||||||||||   ||| |||||||||||| ||||||||| |||||||| ||| ||| ||||||     
T  40779758 atacatcgtttggtcccttaatttattttcagttttcaatttagtcatctaattattaaacgttttaaattggtcatttatcttattttcattattcaag 40779659  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| |||||||||||||||||||||  ||| |||| ||||||||||||||  |||||||||||| ||| |  ||| |||||||||||| |||||||    
T  40779658 ttggtcctattttattcattttaacccccaaaaaaaggagaccgttggataagtgaggtctatcatatcaatttgtgtatcaccaacacctgattta 40779562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 93 - 196
Target Start/End: Original strand, 38451553 - 38451656
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| ||||||||||||||| ||||||||| |||||||||||||||||||||||||    
T  38451553 atacatcatttggtcccttaacttattttatgttttcaatttggtcccctaactattaaacgttccaaattggtactttatcttctttccatcattcaat 38451652  T
Q  193 ttgg 196  Q
    ||||    
T  38451653 ttgg 38451656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 93 - 259
Target Start/End: Complemental strand, 38451823 - 38451657
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||  ||||||||||||  ||||||||||| ||  | |||||||||||||||  |||||||||||| ||||||||| |||||||||||    
T  38451823 atacatcatttggtcatttaacttattttttgttttcaatttggtatcctaactattaaacgttctaaattggtccttcatcttcttttcatcattcaat 38451724  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcaga 259  Q
    |||| | ||||||||||||||||||   | | |||| |||| ||||||||| |||| ||||||||||    
T  38451723 ttggtcatattttattcattttaacatcctaaaaaaggagatcgttggataaatgaagtctatcaga 38451657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 93 - 217
Target Start/End: Original strand, 52437909 - 52438033
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    ||||||||  |||||  ||||||||||||| ||||||||||| ||| ||||||||||||| |||| ||||||||| |||||||||||| ||||||| |||    
T  52437909 atacatcatatggtcttttaacttattttctgttttcaatttggtctcttaactattaaatgttttaaattggtcatttatcttctttacatcatttaat 52438008  T
Q  193 ttggccctattttattcattttaac 217  Q
    |||| ||||||||||| ||||||||    
T  52438009 ttggtcctattttatttattttaac 52438033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 40779459 - 40779414
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaa 403  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  40779459 aacttcaacaaaaaccacaaaatcaaacatttaaatttataattaa 40779414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 13929296 - 13929351
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  13929296 atacatcatttggtcccttaacttatttttggttttcaatttggtcccttaactat 13929351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 34653436 - 34653491
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||| ||||||| ||| |||||||||||||    
T  34653436 atacatcatttggtcccttaacttattttcggttttcactttggtcccttaactat 34653491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 49619638 - 49619588
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||| ||||    
T  49619638 aacttcaacaaaaaccacaaaatcaaacatttaaatttagaattaacacca 49619588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 21246579 - 21246523
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaa 160  Q
    |||||||||||||||||| | || ||| ||| |||||||||||||||||||||||||    
T  21246579 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaa 21246523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 93 - 280
Target Start/End: Original strand, 45042610 - 45042797
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    ||||||| |||||||| |||| |||||||   || ||| |||  |||||||||| ||||| |||||||||||||| |||||||   ||   | | | |||    
T  45042610 atacatccgttggtcctttaatttattttattttctcagtttgatcccttaactgttaaatgtttcaaattggtcttttatctatgttttgttagtaaat 45042709  T
Q  193 ttggccctattttattcattttaac-catcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaaca 280  Q
    |||| | |||||| || |||||||| |||  | |||| |||||||||||||| ||||||| ||||||||||||| || ||||| |||||    
T  45042710 ttggtcatattttgttaattttaactcattta-aaaaggagaccgttggataaatgaggtatatcagatctaaccgtgtatcatcaaca 45042797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 25785969 - 25786024
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| |||||||    
T  25785969 atacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 25786024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 25787279 - 25787224
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| |||||||    
T  25787279 atacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 25787224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 104 - 167
Target Start/End: Complemental strand, 43808625 - 43808562
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtc 167  Q
    |||||||||||||||||| | || ||| | | ||||||||||||||||||||||||| ||||||    
T  43808625 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaacgtttcaatttggtc 43808562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 30743099 - 30743165
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    ||||| |||||||||||| | || ||||| | ||||||||||||||||| ||||||| |||||||||    
T  30743099 ggtcctttaacttattttaatttctcaatgtggtcccttaactattaaatgtttcaatttggtcctt 30743165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 43807447 - 43807513
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    ||||| |||||||||||| | || ||| |||||||| |||||||||||| ||||||| |||||||||    
T  43807447 ggtcctttaacttattttaatttctcagtttagtccattaactattaaatgtttcaatttggtcctt 43807513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 170
Target Start/End: Original strand, 9822665 - 9822729
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||| || || ||| ||| ||| ||||||||||||||||||||| |||||||||    
T  9822665 gtcccttaacttattt-caattgtcagtttggtcacttaactattaaacgtttcaatttggtcctt 9822729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 358 - 399
Target Start/End: Original strand, 40778674 - 40778715
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataa 399  Q
    ||||||| ||||||| ||||||||||||||||||||||||||    
T  40778674 aacttcagcaaaaaccacaaaatcaaacatttaaatttataa 40778715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 94 - 167
Target Start/End: Original strand, 48467263 - 48467336
Alignment:
Q  94 tacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtc 167  Q
    ||||||| ||||||||||||||||||||  ||||||||||| || || ||||||| ||  ||||||| ||||||    
T  48467263 tacatcatttggtcccttaacttattttttgttttcaatttggttccctaactataaagtgtttcaatttggtc 48467336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 10579718 - 10579662
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | |||| |||| ||||||||||||||||| |||||    
T  10579718 ttggtcccttaacttattttttggtttcgatttggtcccttaactattaaaagtttc 10579662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 13930790 - 13930735
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||  |||||||    
T  13930790 atacatcatttggtcccttaacttatttttggttttcaatttggtcctctaactat 13930735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 47411563 - 47411508
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||| |||||| |||| || || |||||||    
T  47411563 atacatcatttggtcccttaacttattttcggttttccatttggttccctaactat 47411508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 172
Target Start/End: Original strand, 47560140 - 47560219
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||| ||||||||||| |||||||||  |||||| ||| ||||| ||||||| ||  ||||||| ||| |||||||    
T  47560140 atacatcatttggtcccttaccttattttcgattttcactttggtcccctaactataaagtgtttcaatttgatccttta 47560219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 168
Target Start/End: Original strand, 22167793 - 22167855
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||||||||||| | || ||| ||||||||||||| ||||||  ||||||| |||||||    
T  22167793 tcccttaacttattttaatttctcagtttagtcccttaaatattaagtgtttcaatttggtcc 22167855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 48225095 - 48225165
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||  ||||||||||||||||||||| |||||   |||||||||||    
T  48225095 ttggtcccttaacttactttttggtttcgttttagtcccttaactattaaaagtttcgttttggtccttta 48225165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 169
Target Start/End: Original strand, 48332730 - 48332792
Alignment:
Q  107 cccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||||||||||   || ||| || |||||||||||||||||| ||||||| ||||||||    
T  48332730 cccttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcct 48332792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 50679927 - 50679881
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||||||||||||||| |||||| | ||| |||||||||||||    
T  50679927 ttggtcccttaacttatttttagtttttattttggtcccttaactat 50679881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 7204290 - 7204234
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||||    
T  7204290 ttggtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 7204234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 11652891 - 11652947
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  11652891 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 11652947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 44979436 - 44979512
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||| ||  ||||||||||||||||  ||||||| ||| ||| ||||||||| ||  || |||||||||||||    
T  44979436 atacatcatttaatcccttaacttattttttgttttcactttggtctcttaactataaagtgtctcaaattggtcct 44979512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 117; Significance: 2e-59; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 93 - 289
Target Start/End: Original strand, 682266 - 682462
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||  ||||| ||||||||||||||| ||||||||||| ||||  ||||||||||||||| |||||||||| ||||||||||||||||||||||||    
T  682266 atacatcgtttggttccttaacttattttctgttttcaatttggtcctctaactattaaacgttccaaattggtcatttatcttctttccatcattcaat 682365  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| | ||||||||||||||||| |  ||| |||| |||||||||||||| ||||||||||||||||||| |||| |||||||||||| |||||||    
T  682366 ttggtcttattttattcattttaatccacaaaaaaaggagaccgttggataaatgaggtctatcagatctagctgtgtatcaccaacacttgattta 682462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 97 - 289
Target Start/End: Complemental strand, 683651 - 683461
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttgg 196  Q
    |||| ||||||| ||||||||||||| ||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  683651 atcatttggtcctttaacttattttctgttttcaatttggtcccctacctattaaacgtttcaaattggtcttttatcttctttccttcattcaatttgg 683552  T
Q  197 ccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
     || |||||||||||||||| |  ||| |||| |||||||||| ||| ||||||||||||||||||||||||||||| ||||||| |||||||    
T  683551 tcccattttattcattttaatc--caaaaaaaagagaccgttgaataaatgaggtctatcagatctaactgtatatctccaacacctgattta 683461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 13562379 - 13562223
Alignment:
Q  125 ttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaaccatcaa 223  Q
    ||||||| || |||||||||||||||||||||||||| |||||||||||| || |||   ||| | ||||||| ||||||||||| ||||||| |  | |    
T  13562379 ttttcaaattggtcccttaactattaaacgtttcaaaatggtcctttatctttattttagtca-taaatttggtcctattttattaattttaaactccta 13562281  T
Q  224 taaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
     ||||  |||| |||||||| | ||| || |||||||||||| || ||||||||||||    
T  13562280 aaaaagaagactgttggataaaggagatccatcagatctaacagtgtatcaccaacac 13562223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 1757598 - 1757532
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| ||| ||||||||||||||||||||||||| |||||||||    
T  1757598 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgtttcaatttggtcctt 1757532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 5311280 - 5311356
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||| ||||||| ||  || |||| ||||||||    
T  5311280 atacatcatttggtcccttaacttatttttggttttcaatttagtcccctaactataaagtgtctcaatttggtcct 5311356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 8412431 - 8412376
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||| | ||||||||||||||||||||  ||||||||||||||||| |||||||    
T  8412431 atacattatttggtcccttaacttattttttgttttcaatttagtcccctaactat 8412376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 31738364 - 31738439
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||  ||||||||||||||||||||  ||||||||||| ||||| ||||||| ||  ||||||| |||||||    
T  31738364 atacatcctttggtcccttaacttatttttggttttcaatttggtcccctaactataaagtgtttcaatttggtcc 31738439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 682558 - 682608
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||| ||||    
T  682558 aacttcaacaaaaaccacataatcaaacctttaaatttataattaacacca 682608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 27108278 - 27108212
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| ||| |||||||||||||||||||||| || |||| ||||    
T  27108278 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttggacctt 27108212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 27150075 - 27150009
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| ||| |||||||||||||||||||||| || |||| ||||    
T  27150075 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaacgttttaatttggacctt 27150009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 110 - 170
Target Start/End: Complemental strand, 1693079 - 1693019
Alignment:
Q  110 ttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||| | |||||| ||| |||||||||||||||||| ||| || |||||||||    
T  1693079 ttaacttattttaatttttcagtttggtcccttaactattaaacattttaatttggtcctt 1693019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 9899575 - 9899631
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||    
T  9899575 ttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 9899631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 11724398 - 11724334
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||| | |||||  | | ||| ||||||||||||||||||||| |||||||||    
T  11724398 tcccttaacttattttaatttttcggtgtggtcacttaactattaaacgtttcaatttggtcctt 11724334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Complemental strand, 18139602 - 18139522
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||||||||||||||||| ||||||| |||  |||  ||||||| ||  || |||||||||||| ||||    
T  18139602 atacatcatttggtcccttaacttattttccgttttcactttgatcctctaactataaagtgtctcaaattggtcccttat 18139522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 19048259 - 19048315
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||    
T  19048259 ttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 19048315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 8411087 - 8411142
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| || || ||||||||||||||  ||||||||||||||||| |||||||    
T  8411087 atacatcatttagttccttaacttatttttggttttcaatttagtcccctaactat 8411142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 33802132 - 33802077
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  ||||||| ||| ||||| |||||||    
T  33802132 atacatcatttggtcccttaacttatttttggttttcactttggtcccctaactat 33802077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 6889085 - 6889019
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||||||||||| |||  | ||||  ||||||||||||||||||||| ||||||  |||||||    
T  6889085 ttggtcccttaacttacttttgggtttcgttttagtcccttaactattaaaagtttcattttggtcc 6889019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 7829476 - 7829406
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  7829476 ttggtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttcgttttggtccttta 7829406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 140 - 281
Target Start/End: Original strand, 13561326 - 13561467
Alignment:
Q  140 cttaactattaaacgtttcaaattggtcctttatcttctttcca-tcattcaatttggccctattttattcattttaaccatcaataaaatgagaccgtt 238  Q
    |||||||||||||||||||||| ||||| ||||||||  ||  | ||| ||||||||| ||||||||||| ||||||| |  |   ||||  ||| ||||    
T  13561326 cttaactattaaacgtttcaaaatggtcttttatctttgttatagtca-tcaatttggtcctattttattaattttaaactcctcaaaaagaagatcgtt 13561424  T
Q  239 ggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||| |  ||||| |||||||||||  || ||||||||||||    
T  13561425 ggataaagaaggtccatcagatctaatagtgtatcaccaacac 13561467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 31740378 - 31740332
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    ||||||| ||||||||||||  ||||||||||| |||||||||||||    
T  31740378 ttggtcctttaacttattttttgttttcaatttggtcccttaactat 31740332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 173
Target Start/End: Original strand, 10673653 - 10673690
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||||||| |||||||||||| ||||||||||||    
T  10673653 gtcccttaactaataaacgtttcaatttggtcctttat 10673690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 105 - 158
Target Start/End: Complemental strand, 30860372 - 30860319
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    |||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||    
T  30860372 gtcccttaacttattttttgatttcattttggtcccttaactattaaaagtttc 30860319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 6889145 - 6889089
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  6889145 ttggtcccttaacttattttttgatttcgttttggtcccttaactattaaaagtttc 6889089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 8286386 - 8286442
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  8286386 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 8286442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 8938901 - 8938957
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  8938901 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 8938957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 12153609 - 12153553
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||||||| ||||||||||||| |||||    
T  12153609 ttggtcccttaacttattttttggtttcgttttagtctcttaactattaaaagtttc 12153553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 18693679 - 18693623
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  18693679 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 18693623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 98 - 158
Target Start/End: Complemental strand, 29836197 - 29836137
Alignment:
Q  98 tcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||||||  | || |  ||| ||||||||||||||||| |||||    
T  29836197 tcagttggtcccttaacttattttttggttacgttttggtcccttaactattaaaagtttc 29836137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 30859935 - 30859991
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  30859935 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 30859991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 113; Significance: 5e-57; HSPs: 59)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 113; E-Value: 5e-57
Query Start/End: Original strand, 93 - 289
Target Start/End: Complemental strand, 30916233 - 30916037
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||||||||||||||||  ||||||||||||||||| |||||||||||||||  ||| ||||| ||||||||||||||||||||||||    
T  30916233 atacatcatttggtcccttaacttattttatgttttcaatttagtcccctaactattaaacgttctaaagtggtcttttatcttctttccatcattcaat 30916134  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||| | ||||| |||||||||||||  ||| |||| |||||| ||||||| || ||||||||||||||||||||| ||| |||||||| |||||||    
T  30916133 ttggtcatatttcattcattttaacctccaaaaaaaggagaccattggataaattaggtctatcagatctaactgtgtattaccaacacctgattta 30916037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 102 - 281
Target Start/End: Complemental strand, 14357988 - 14357809
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggcccta 201  Q
    ||||||| ||||||||||||||||||| ||||| ||||| ||||||||||||| | ||||| |||| |||||||||||||||||||||||||||| ||||    
T  14357988 ttggtcctttaacttattttcagtttttaatttggtcccctaactattaaacgctccaaatcggtcatttatcttctttccatcattcaatttggtccta 14357889  T
Q  202 ttttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||||| |||||||||  ||| |||| |||||||||||||| ||||| ||||||| |||||||||| ||||||||||||    
T  14357888 ttttattaattttaacccccaaaaaaaggagaccgttggataaatgagatctatcatatctaactgtgtatcaccaacac 14357809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 101; E-Value: 8e-50
Query Start/End: Original strand, 97 - 278
Target Start/End: Complemental strand, 33362678 - 33362497
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttgg 196  Q
    |||| ||||||||||||||||||||  ||||| ||||| ||||  |||||||||||| ||||||||||||||||||||||||||||||||||||||||||    
T  33362678 atcatttggtcccttaacttattttttgtttttaatttggtcctctaactattaaac-tttcaaattggtcctttatcttctttccatcattcaatttgg 33362580  T
Q  197 ccctattttattcattttaaccatc--aataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaa 278  Q
     ||||||| ||||||||||||| ||  || |||| |||||| ||||||| |||||||||||||||||||||||| |||||||||    
T  33362579 tcctatttcattcattttaacc-tcaaaaaaaaaggagaccattggataaatgaggtctatcagatctaactgtgtatcaccaa 33362497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 14356448 - 14356628
Alignment:
Q  108 ccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttat 207  Q
    ||||||||||||||||||||||||||| ||||  ||||||||||| |||  ||||||||| |||||||||||||||||||||||||||  ||||||||||    
T  14356448 ccttaacttattttcagttttcaatttggtcctctaactattaaatgttctaaattggtcgtttatcttctttccatcattcaatttgatcctattttat 14356547  T
Q  208 tcattttaac-catcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||||||||| ||  || |||| |||||| ||||||  ||||||||||||| |||||| ||| |||||||||||| |||||||    
T  14356548 tcattttaactca--aaaaaaaagagaccattggatgaatgaggtctatcacatctaattgtgtatcaccaacacctgattta 14356628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 93 - 211
Target Start/End: Original strand, 30912315 - 30912433
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||| ||||||||||||||| ||||||||||||||||  ||||||||||||||| |||| | |||||||||||||||| |||||||||||    
T  30912315 atacatcatttggttccttaacttattttctgttttcaatttagtcctctaactattaaacgttccaaagtagtcctttatcttctttacatcattcaat 30912414  T
Q  193 ttggccctattttattcat 211  Q
    |||| ||||||| ||||||    
T  30912415 ttggtcctatttcattcat 30912433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 206 - 289
Target Start/End: Original strand, 30915611 - 30915694
Alignment:
Q  206 attcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    |||||||||||||  ||| |||| |||||| ||||||| |||||||||||||||||||||||| |||||||||||| |||||||    
T  30915611 attcattttaacctccaaaaaaaggagaccattggatatatgaggtctatcagatctaactgtgtatcaccaacacctgattta 30915694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 136 - 281
Target Start/End: Original strand, 42962067 - 42962212
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagac 234  Q
    ||||| ||||||||||||| || |||||||||||||||| || ||| ||||| ||||||||| ||||||||||| ||||||| | ||   ||||  ||||    
T  42962067 gtcccctaactattaaacgctttaaattggtcctttatctttgttttcatca-tcaatttggtcctattttattaattttaaacctctcaaaaagaagac 42962165  T
Q  235 cgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||||||| | ||||||||| ||||||||  || ||||||||||||    
T  42962166 cgttggataaaggaggtctataagatctaatggtgtatcaccaacac 42962212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 19825875 - 19825955
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||||||||||||||||  |||||||||||  |||| ||||||  |||||| ||||| |||||||||||    
T  19825875 atacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactaaaaaacgtctcaaactggtcctttat 19825955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 11907265 - 11907199
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| ||| ||||||||||||||||| ||||||| |||||||||    
T  11907265 ggtcccttaacttattttaatttctcagtttggtcccttaactattaaatgtttcaatttggtcctt 11907199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 140 - 281
Target Start/End: Complemental strand, 38603818 - 38603677
Alignment:
Q  140 cttaactattaaacgtttcaaattggtcctttatcttctttcca-tcattcaatttggccctattttattcattttaaccatcaataaaatgagaccgtt 238  Q
    |||||||||||||| ||||||| ||||||||||||||  ||  | |||| |||||||| ||||||||||| ||||||| |  | | ||||  ||||||||    
T  38603818 cttaactattaaacttttcaaaatggtcctttatctttgttttagtcat-caatttggtcctattttattaattttaaactcctaaaaaagaagaccgtt 38603720  T
Q  239 ggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||| |  ||||| |||||||||||  || ||||||||||||    
T  38603719 ggataaagaaggtccatcagatctaatagtgtatcaccaacac 38603677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 166
Target Start/End: Original strand, 39134679 - 39134741
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggt 166  Q
    |||||||||||||||||| | || ||| ||| ||||||||||||||||||||||||| |||||    
T  39134679 ggtcccttaacttattttaaattctcagtttggtcccttaactattaaacgtttcaatttggt 39134741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 204
Target Start/End: Original strand, 9038505 - 9038573
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattt 204  Q
    ||||||||| |||||||| |||||| || ||| |||||||| ||||||| ||||||||||| |||||||    
T  9038505 gtcccttaattattaaacatttcaatttagtcttttatcttgtttccataattcaatttggtcctattt 9038573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 24071545 - 24071481
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||| | |||||| |||||| |||||| ||||||| ||||||| |||||||||    
T  24071545 tcccttaacttattttaatttttcagtttagttccttaattattaaatgtttcaatttggtcctt 24071481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 136 - 176
Target Start/End: Original strand, 39050732 - 39050772
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  39050732 gtcccttaactattaaacgtttcaaaatggtcctttatctt 39050772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 364 - 408
Target Start/End: Original strand, 40815564 - 40815608
Alignment:
Q  364 aacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||| |||||||||||||||||||||||||||||| ||||    
T  40815564 aacaaaaaccacaaaatcaaacatttaaatttataattaacacca 40815608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 358 - 409
Target Start/End: Complemental strand, 14357697 - 14357646
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagaccat 409  Q
    |||||||||||||   |||||||||||||||||||||||||||||| |||||    
T  14357697 aacttcaacaaaattcacaaaatcaaacatttaaatttataattaacaccat 14357646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 97 - 148
Target Start/End: Original strand, 19523988 - 19524039
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||| ||||||||||||||||||||  ||||||||||| |||||||||||||    
T  19523988 atcatttggtcccttaacttatttttggttttcaatttggtcccttaactat 19524039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 19525403 - 19525348
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  ||||||||||| ||||| |||||||    
T  19525403 atacatcatttggtcccttaacttatttttggttttcaatttggtcccctaactat 19525348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 22812502 - 22812447
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||   |||||| |||||||||||||||||    
T  22812502 atacatcatttggtcccttaacttattttttattttcattttagtcccttaactat 22812447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 20841897 - 20841827
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  20841897 ttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttcgttttggtccttta 20841827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 30915780 - 30915830
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| ||| |||||||| ||||||||||||||||| ||||    
T  30915780 aacttcaacaaaaaccacataatcaaacctttaaatttataattaacacca 30915830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 36442235 - 36442305
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| ||||||  |||||||||||    
T  36442235 ttggtcccttaacttattttttgctttcgttttggtcccttaactattaaaagtttcattttggtccttta 36442305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 105 - 170
Target Start/End: Complemental strand, 8284347 - 8284282
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    ||||||||||||||||| | || ||| ||||||| ||||||||||||| |||| || |||||||||    
T  8284347 gtcccttaacttattttaatttctcagtttagtctcttaactattaaatgttttaatttggtcctt 8284282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 104 - 169
Target Start/End: Complemental strand, 21011912 - 21011847
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    ||||||||||||||||||   || ||| || |||||||||||||||||| ||||||| ||||||||    
T  21011912 ggtcccttaacttattttttcttctcacttcagtcccttaactattaaatgtttcaatttggtcct 21011847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 10570426 - 10570370
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||    
T  10570426 ttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 10570370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 12829583 - 12829651
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||||||||||||   |||||| ||| ||||||||||||  |||||| |||||||||||| ||||    
T  12829583 gtcccttaacttattttattttttcagtttggtcccttaactaagaaacgtctcaaattggtcccttat 12829651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Original strand, 23679159 - 23679215
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaa 160  Q
    ||||||| || ||||||| | |||||| ||| |||||||||||||||||||||||||    
T  23679159 ggtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaa 23679215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 104 - 160
Target Start/End: Complemental strand, 23855653 - 23855597
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaa 160  Q
    ||||||| || ||||||| | |||||| ||| |||||||||||||||||||||||||    
T  23855653 ggtccctaaatttattttaatttttcagtttggtcccttaactattaaacgtttcaa 23855597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 41905176 - 41905256
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||| ||||||||||||||||||||  ||||||| ||| ||||| ||||||| ||| || | ||| |||||| ||||    
T  41905176 atacatcatttggtcccttaacttatttttggttttcattttggtcccctaactataaaatgtcttaaactggtcccttat 41905256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 42382216 - 42382160
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | |||| |||| ||||||||||||||||| |||||    
T  42382216 ttggtcccttaacttattttttggtttcgatttggtcccttaactattaaaagtttc 42382160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 1273090 - 1273165
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| |||||||||||| |||||||  ||||||| ||| |||| |||||||| ||| || |||| |||||||    
T  1273090 atacatcatttggtcccttaatttatttttggttttcattttggtcctttaactataaaatgtctcaatttggtcc 1273165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 1155979 - 1156045
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| ||||||  |||||||    
T  1155979 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttcattttggtcc 1156045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 6131939 - 6132009
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  6131939 ttggtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttctttttggtccttta 6132009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 14858558 - 14858488
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||  ||| |||||||||||||||||||||||   |||||||||||    
T  14858558 ttggtcccttaacttactttttggtttcgttttggtcccttaactattaaacgtttcgttttggtccttta 14858488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 22803573 - 22803503
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||||   |||||||||||    
T  22803573 ttggtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttctttttggtccttta 22803503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 104 - 170
Target Start/End: Original strand, 24070417 - 24070483
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||| ||||||| | || ||| | |  |||||||||||||||||||||||| |||||||||    
T  24070417 ggtcccttaatttattttaatttctcagtgtgatcccttaactattaaacgtttcaatttggtcctt 24070483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 24099961 - 24100031
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| |||  | ||||  ||| ||||||||||||||||| ||||||  |||||||||||    
T  24099961 ttggtcccttaacttactttttggtttcgttttggtcccttaactattaaaagtttcattttggtccttta 24100031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Original strand, 32411974 - 32412040
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||||  | ||||||||| ||||||||||| | ||  || ||||||||||||    
T  32411974 ttggtcccttaacttatttttggatttcaatttggtcccttaactttaaattgtctcaaattggtcc 32412040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 126 - 176
Target Start/End: Original strand, 38602696 - 38602746
Alignment:
Q  126 tttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||||| |||| |||||||||||||||||||| ||| ||||||| ||||||    
T  38602696 tttcaaattagccccttaactattaaacgttttaaaatggtcctctatctt 38602746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 176
Target Start/End: Complemental strand, 39051778 - 39051704
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    |||||||||||||||| ||    ||||| | || ||| ||||||||||||| |||||||| ||||||||||||||    
T  39051778 ttggtcccttaacttaattctttttttcgaattggtctcttaactattaaatgtttcaaaatggtcctttatctt 39051704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 109 - 167
Target Start/End: Original strand, 40058035 - 40058093
Alignment:
Q  109 cttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtc 167  Q
    |||||||||||||  ||||||| |||  |||||||||||||||  ||||||||||||||    
T  40058035 cttaacttatttttggttttcattttgatcccttaactattaagtgtttcaaattggtc 40058093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 168
Target Start/End: Complemental strand, 40059434 - 40059368
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||||||||||||||  ||||||| |||  |||| ||||||||||  |||| ||||||||||    
T  40059434 ttggtcccttaacttatttttggttttcattttgatcccctaactattaagtgttttaaattggtcc 40059368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Complemental strand, 42382156 - 42382086
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| ||| || ||||  ||| ||||||||||||||||| |||||   |||||||||||    
T  42382156 ttggtcccttaacttacttttaggtttcgttttggtcccttaactattaaaagtttcgttttggtccttta 42382086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 102 - 167
Target Start/End: Complemental strand, 8762506 - 8762441
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtc 167  Q
    |||||||||||||||||||| | |||||||||| ||||| | ||||| ||| || |||| ||||||    
T  8762506 ttggtcccttaacttatttttaattttcaatttggtcccatgactataaaatgtctcaatttggtc 8762441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 104 - 169
Target Start/End: Original strand, 21006152 - 21006217
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    ||||||||||||||||||   || ||| ||||||||||||||| ||||| || |||| ||||||||    
T  21006152 ggtcccttaacttattttttcttctcactttagtcccttaacttttaaatgtgtcaatttggtcct 21006217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 403
Target Start/End: Complemental strand, 30915933 - 30915888
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaa 403  Q
    ||||||||||||||| |||  ||||||| |||||||||||||||||    
T  30915933 aacttcaacaaaaaccacaccatcaaacctttaaatttataattaa 30915888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 1156039 - 1156095
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  1156039 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 1156095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 1156327 - 1156271
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  1156327 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 1156271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 4349918 - 4349862
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  4349918 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 4349862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 6172384 - 6172328
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  6172384 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 6172328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 9040758 - 9040814
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  9040758 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 9040814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 9438252 - 9438308
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  9438252 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 9438308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 105 - 173
Target Start/End: Original strand, 12861562 - 12861630
Alignment:
Q  105 gtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||||||||||||   || ||| ||| ||||||||||||  |||||| |||||||||||| ||||    
T  12861562 gtcccttaacttattttattttctcagtttggtcccttaactaagaaacgtctcaaattggtcccttat 12861630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 146
Target Start/End: Complemental strand, 17094476 - 17094432
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaact 146  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||    
T  17094476 ttggtcccttaacttattttttggtttcattttagtcccttaact 17094432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 106 - 158
Target Start/End: Complemental strand, 20841953 - 20841901
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||  | ||||  ||||||||||||||||||||| |||||    
T  20841953 tcccttaacttattttttggtttcgttttagtcccttaactattaaaagtttc 20841901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 37812246 - 37812302
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  37812246 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 37812302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 37812306 - 37812362
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    |||||||||||||||| |||  | ||||| ||| ||||||||||||||||| |||||    
T  37812306 ttggtcccttaacttactttttggtttcattttggtcccttaactattaaaagtttc 37812362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 37812594 - 37812538
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  37812594 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 37812538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 125 - 216
Target Start/End: Complemental strand, 42963298 - 42963207
Alignment:
Q  125 ttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaa 216  Q
    ||||||| || ||||  ||||||||||||||||||| |||||| |||||| || ||| ||||| |||||||   ||||||||||| |||||||    
T  42963298 ttttcaaattggtcctctaactattaaacgtttcaatttggtcatttatctttgttttcatca-tcaatttaatcctattttattaattttaa 42963207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 97; Significance: 2e-47; HSPs: 28)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 126 - 281
Target Start/End: Original strand, 20921544 - 20921700
Alignment:
Q  126 tttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcattttaaccat-caat 224  Q
    |||||| || ||||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||| |  ||     
T  20921544 tttcaaattggtcccctaaatattaaacgtttcaaattggtccttgatcttctttccatcattcaatttggtcctattttattcattttaaccctaaaaa 20921643  T
Q  225 aaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||| ||||| |||||||| ||||||||||||| |||||||||||||||||||||||    
T  20921644 aaaaggagactgttggataaatgaggtctatcatatctaactgtatatcaccaacac 20921700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 108 - 289
Target Start/End: Original strand, 12364206 - 12364387
Alignment:
Q  108 ccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttat 207  Q
    |||||| |||||||| ||||| |||||  ||   |||||||||||||||| ||||||||| |||||||||||||  || |||||||||| ||||||| ||    
T  12364206 ccttaatttattttctgtttttaatttgatcatctaactattaaacgttttaaattggtcatttatcttctttcagtccttcaatttggtcctatttaat 12364305  T
Q  208 tcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacacatgattta 289  Q
    | |||||||||  ||| |||| | |||| ||||||| |||||||||||||||||||||||| |||||||||||||| |||||    
T  12364306 ttattttaacccccaaaaaaaggggaccattggataaatgaggtctatcagatctaactgtgtatcaccaacacataattta 12364387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 163 - 289
Target Start/End: Complemental strand, 12366061 - 12365937
Alignment:
Q  163 tggtcctttatcttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatct 262  Q
    ||||||||||| |||||||||||||||||||||| |||||||||||||||||||||  ||  |||  |||||||||||||| ||||| |||||||||| |    
T  12366061 tggtcctttatattctttccatcattcaatttggtcctattttattcattttaaccccca--aaatggagaccgttggataaatgagatctatcagatat 12365964  T
Q  263 aactgtatatcaccaacacatgattta 289  Q
    |||||| |||||||||||| |||||||    
T  12365963 aactgtgtatcaccaacacctgattta 12365937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 110 - 216
Target Start/End: Original strand, 1257507 - 1257613
Alignment:
Q  110 ttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattc 209  Q
    ||||||||||||| |||||||||||  |||||| |||||||||| ||| |||||| || |||||||||||| ||| |||| || |||  |||||||||||    
T  1257507 ttaacttattttcggttttcaattttatcccttgactattaaacattttaaattgatcatttatcttcttttcattattcgatgtggttctattttattc 1257606  T
Q  210 attttaa 216  Q
    |||||||    
T  1257607 attttaa 1257613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 97 - 168
Target Start/End: Original strand, 20921486 - 20921557
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||| ||||||| |||| ||||||||| |||||||||| ||||| ||| |||||||||||||||||||||||    
T  20921486 atcatttggtcctttaatttattttcaattttcaatttggtcccctaaatattaaacgtttcaaattggtcc 20921557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 188 - 281
Target Start/End: Original strand, 370863 - 370956
Alignment:
Q  188 tcaatttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    ||||||||  ||||||||||| ||||||| | || | ||||| ||||||||||||| ||||||||||||| ||||||  || ||||||||||||    
T  370863 tcaatttgatcctattttattgattttaaacctctaaaaaataagaccgttggataaatgaggtctatcaaatctaatggtgtatcaccaacac 370956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 372050 - 371894
Alignment:
Q  125 ttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatc-ttctttccatcattcaatttggccctattttattcattttaaccatcaa 223  Q
    ||||||| |||||||| ||||||||||||||||||| ||| ||||||||| || ||| ||||| ||||||||  ||||||||||| ||||||| | ||      
T  372050 ttttcaaattagtcccctaactattaaacgtttcaatttgatcctttatctttgttttcatca-tcaatttgatcctattttattaattttaaacctctc 371952  T
Q  224 taaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
     ||||   ||| |||||||| | |||||  |||||||||||| || |||||| |||||    
T  371951 aaaaagatgactgttggataaaggaggttcatcagatctaacggtgtatcactaacac 371894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 106 - 170
Target Start/End: Complemental strand, 33553467 - 33553403
Alignment:
Q  106 tcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||| | |||||| ||| ||| ||||||||||||||||||||| |||||||||    
T  33553467 tcccttaacttattttaatttttcagtttggtctcttaactattaaacgtttcaatttggtcctt 33553403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 93 - 169
Target Start/End: Original strand, 42596561 - 42596637
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcct 169  Q
    |||||||| |||||||||||||||||||||  |||| | ||| ||||| |||||||||||||| |||| ||||||||    
T  42596561 atacatcatttggtcccttaacttattttcgttttttattttggtcccctaactattaaacgtctcaatttggtcct 42596637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 20630775 - 20630709
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    ||||||| |||||||||| | || ||| |||| |||||||||||||||||||||||| |||||||||    
T  20630775 ggtccctaaacttattttaatttctcagtttaatcccttaactattaaacgtttcaatttggtcctt 20630709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 23178994 - 23178922
Alignment:
Q  96 catcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||| |||||||||||||||||||| |||||||| ||| ||||| ||||||| ||  |||| ||||||||||    
T  23178994 catcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcc 23178922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 96 - 168
Target Start/End: Complemental strand, 23590251 - 23590179
Alignment:
Q  96 catcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||| |||||||||||||||||||| |||||||| ||| ||||| ||||||| ||  |||| ||||||||||    
T  23590251 catcatttggtcccttaacttatttttagttttcactttggtcccctaactataaactgttttaaattggtcc 23590179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 7036967 - 7037042
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    |||||||| ||||||| ||||||||||||  | ||||| ||||||||||||||||| ||  ||||||| |||||||    
T  7036967 atacatcatttggtcctttaacttatttttggatttcactttagtcccttaactataaagtgtttcaatttggtcc 7037042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 39110087 - 39110143
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||| ||| ||||||||||||||||| |||||    
T  39110087 ttggtcccttaacttattttttggtttcattttggtcccttaactattaaaagtttc 39110143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 102 - 173
Target Start/End: Original strand, 3665234 - 3665305
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    ||||||||||||||||||||| | ||||| ||| ||||  ||||||| ||| ||||||| ||||||| ||||    
T  3665234 ttggtcccttaacttattttcggatttcattttggtcctctaactataaaatgtttcaatttggtcccttat 3665305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 4829466 - 4829521
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||| | ||||||||||||||  ||||||| |||||||||||||||||    
T  4829466 atacatcatttgattccttaacttatttttcgttttcactttagtcccttaactat 4829521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Complemental strand, 7038447 - 7038392
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  | ||||| ||| |||||||||||||    
T  7038447 atacatcatttggtcccttaacttatttttggatttcattttggtcccttaactat 7038392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 35799513 - 35799568
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||  ||||||||||||||||  ||||||||||||||||| |||||||    
T  35799513 atacatcatttcatcccttaacttatttttggttttcaatttagtcccctaactat 35799568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 37867757 - 37867812
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||||||||||||||||  |||||||||||  |||| |||||||    
T  37867757 atacatcatttggtcccttaacttatttttggttttcaatttgatcccctaactat 37867812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 38594122 - 38594079
Alignment:
Q  133 ttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  38594122 ttagtcccttaactattaaacgttttaaaatggtcatttatctt 38594079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 133 - 176
Target Start/End: Complemental strand, 38597718 - 38597675
Alignment:
Q  133 ttagtcccttaactattaaacgtttcaaattggtcctttatctt 176  Q
    ||||||||||||||||||||||||| ||| ||||| ||||||||    
T  38597718 ttagtcccttaactattaaacgttttaaaatggtcatttatctt 38597675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 358 - 408
Target Start/End: Complemental strand, 12365848 - 12365798
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| | | |||||||| ||||||||||||||||| ||||    
T  12365848 aacttcaacaaaaaccatataatcaaacctttaaatttataattaacacca 12365798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 12854210 - 12854164
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||||||||||||||| || ||||| ||| |||||||||||||    
T  12854210 ttggtcccttaacttatttttagatttcattttggtcccttaactat 12854164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 148
Target Start/End: Complemental strand, 37869146 - 37869100
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    ||||||||||||||||||||   |||||||||| |||||||||||||    
T  37869146 ttggtcccttaacttatttttgattttcaatttggtcccttaactat 37869100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 7031820 - 7031876
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  7031820 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 7031876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Complemental strand, 7182742 - 7182686
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  7182742 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 7182686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 27516174 - 27516230
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  27516174 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 27516230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 36099308 - 36099364
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | ||||  ||| ||||||||||||||||| |||||    
T  36099308 ttggtcccttaacttattttttggtttcgttttggtcccttaactattaaaagtttc 36099364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 95; Significance: 3e-46; HSPs: 3)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 93 - 255
Target Start/End: Complemental strand, 98795 - 98634
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||||||||||||||||||||||||||||||||| ||||  | |||||||||||||  |||||||| |||||||||||||||||||||||||    
T  98795 atacatca-ttggtcccttaacttattttcagttttcaatttggtcctctgactattaaacgttctaaattggttctttatcttctttccatcattcaat 98697  T
Q  193 ttggccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctat 255  Q
    |||| ||||||||||||| ||||||| |||| | || ||||||||| |||| |||||||||||    
T  98696 ttggtcctattttattcagtttaaccctcaaaagaaggagaccgttcgataaatgaggtctat 98634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #2
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 93 - 220
Target Start/End: Original strand, 98050 - 98177
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaat 192  Q
    |||||||| ||| |||||||||||||||||||||||||||||  |  ||| |||||||||||||  |||||||||||||||||||||| |||||||||||    
T  98050 atacatcatttgatcccttaacttattttcagttttcaatttgatgtctttactattaaacgttctaaattggtcctttatcttcttttcatcattcaat 98149  T
Q  193 ttggccctattttattcattttaaccat 220  Q
    |||| |||||||||||||||||||||||    
T  98150 ttggtcctattttattcattttaaccat 98177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034; HSP #3
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 358 - 408
Target Start/End: Original strand, 98342 - 98392
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaagacca 408  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||    
T  98342 aacttcaacaaaaaccacaaaattaaacatttaaatttataattaacacca 98392  T

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Target: scaffold0065 (Bit Score: 77; Significance: 2e-35; HSPs: 3)
Name: scaffold0065
Description:

Target: scaffold0065; HSP #1
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 97 - 281
Target Start/End: Original strand, 35368 - 35551
Alignment:
Q  97 atcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttgg 196  Q
    |||| ||| ||||||| |||||||||  |||  ||||| ||||  |||||||||||||||| |||||||| ||||||||||||||||| |||||| ||||    
T  35368 atcatttgttcccttaccttattttctatttataatttggtcctctaactattaaacgttttaaattggttctttatcttctttccattattcaa-ttgg 35466  T
Q  197 ccctattttattcattttaaccatcaataaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
     | ||||||||||||||||||   ||  |||| |||||| ||||||| ||||||| |||||||||||||||| ||||||||||||    
T  35467 tcatattttattcattttaacacccataaaaaggagaccattggataaatgaggtttatcagatctaactgtgtatcaccaacac 35551  T

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Target: scaffold0065; HSP #2
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 109 - 217
Target Start/End: Complemental strand, 36845 - 36737
Alignment:
Q  109 cttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttatt 208  Q
    |||||||||||||| ||||||||||| ||| |||| |||||||| |||||||||| ||| ||||||||||||||||||||||||||||   |||||||||    
T  36845 cttaacttattttctgttttcaatttggtctcttacctattaaatgtttcaaattagtcttttatcttctttccatcattcaatttggtgttattttatt 36746  T
Q  209 cattttaac 217  Q
     ||||||||    
T  36745 aattttaac 36737  T

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Target: scaffold0065; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 231 - 276
Target Start/End: Complemental strand, 36689 - 36644
Alignment:
Q  231 agaccgttggatagatgaggtctatcagatctaactgtatatcacc 276  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||    
T  36689 agaccgttggataaatgaggtctatcagatctaactgtgtatcacc 36644  T

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Target: scaffold0041 (Bit Score: 61; Significance: 6e-26; HSPs: 4)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 136 - 280
Target Start/End: Original strand, 611 - 755
Alignment:
Q  136 gtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcattttaaccatcaataaaatgagacc 235  Q
    |||||||||  |||||||||||||| |||||||||||| || ||||||||||||||||||| ||||||| ||  |||||||      | |||| ||||||    
T  611 gtcccttaatcattaaacgtttcaatttggtcctttatattgtttccatcattcaatttggtcctatttaatcaattttaatgggttaaaaaaggagacc 710  T
Q  236 gttggatagatgaggtctatcagatctaactgtatatcaccaaca 280  Q
    |||||||| || | || ||||||||||||||||||||||||||||    
T  711 gttggataaataaagtatatcagatctaactgtatatcaccaaca 755  T

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Target: scaffold0041; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 125 - 281
Target Start/End: Complemental strand, 1207 - 1051
Alignment:
Q  125 ttttcaatttagtcccttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcattttaaccatcaat 224  Q
    ||||||| || ||||||||||  ||||| ||||||| |||| |||||||||| ||| ||||||||||||||| ||||||| ||  ||||||||   | |     
T  1207 ttttcaaattggtcccttaaccgttaaatgtttcaatttggccctttatcttattttcatcattcaatttggtcctatttcatcaattttaacgtgctaa 1108  T
Q  225 aaaatgagaccgttggatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||| |||||||||| ||| |||| || ||||||||||||| || ||||||||||||    
T  1107 aaaaggagaccgttgaataaatgaagtatatcagatctaaccgtgtatcaccaacac 1051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 85180 - 85114
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| | | |||||||||||||||| |||||||| |||||||||    
T  85180 ggtcccttaacttattttaatttctcagtgtggtcccttaactattaaccgtttcaatttggtcctt 85114  T

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Target: scaffold0041; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 358 - 403
Target Start/End: Original strand, 54949 - 54994
Alignment:
Q  358 aacttcaacaaaaactacaaaatcaaacatttaaatttataattaa 403  Q
    ||||||||||||||| ||| |||||||| ||||||| |||||||||    
T  54949 aacttcaacaaaaaccacataatcaaacctttaaatctataattaa 54994  T

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Target: scaffold1337 (Bit Score: 54; Significance: 9e-22; HSPs: 1)
Name: scaffold1337
Description:

Target: scaffold1337; HSP #1
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 141 - 281
Target Start/End: Original strand, 281 - 422
Alignment:
Q  141 ttaactattaaacgtttcaaattggtcctttatcttctttccatcattcaatttggccctattttattcattttaa-ccatcaataaaatgagaccgttg 239  Q
    |||||||| ||||| ||||| ||| |||||| |||| ||||||||||||||||||| ||||||| ||| ||||||| |  | || |||||| ||||||||    
T  281 ttaactatcaaacgcttcaatttgatcctttttcttgtttccatcattcaatttggtcctatttcattaattttaatctcttaaaaaaatgtgaccgttg 380  T
Q  240 gatagatgaggtctatcagatctaactgtatatcaccaacac 281  Q
    |||| ||||| ||| ||| ||||||| || ||||||||||||    
T  381 gataaatgagatctgtcatatctaaccgtgtatcaccaacac 422  T

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Target: scaffold0009 (Bit Score: 39; Significance: 0.0000000000008; HSPs: 2)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 104 - 170
Target Start/End: Complemental strand, 205656 - 205590
Alignment:
Q  104 ggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctt 170  Q
    |||||||||||||||||| | || ||| ||| ||||||||| ||||||||||||||| |||||||||    
T  205656 ggtcccttaacttattttaatttctcagtttggtcccttaattattaaacgtttcaatttggtcctt 205590  T

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Target: scaffold0009; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 102 - 152
Target Start/End: Original strand, 6687 - 6737
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaa 152  Q
    ||||||||||||||||||||  | ||||| |||||||||||||||||||||    
T  6687 ttggtcccttaacttattttttggtttcattttagtcccttaactattaaa 6737  T

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Target: scaffold0046 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 168
Target Start/End: Original strand, 23407 - 23482
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||||||  |||||||||||||||||||  ||||||| ||| ||||| ||||||| ||| || |||| |||||||    
T  23407 atacatcatatggtcccttaacttatttttggttttcagtttggtcccctaactataaaatgtctcaatttggtcc 23482  T

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Target: scaffold0013 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 148
Target Start/End: Original strand, 96161 - 96216
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactat 148  Q
    |||||||| ||||||| |||||||||||||  |||||||||| ||||| |||||||    
T  96161 atacatcatttggtccattaacttattttcgattttcaatttggtcccctaactat 96216  T

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Target: scaffold0120 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 102 - 172
Target Start/End: Original strand, 27744 - 27814
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtccttta 172  Q
    |||||||||||||||| ||| || ||||  ||| ||||||||||||||||| |||||   |||||||||||    
T  27744 ttggtcccttaacttacttttaggtttcgttttggtcccttaactattaaaagtttcgttttggtccttta 27814  T

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Target: scaffold0120; HSP #2
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 102 - 158
Target Start/End: Original strand, 27684 - 27740
Alignment:
Q  102 ttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttc 158  Q
    ||||||||||||||||||||  | |||| |||| || |||||||||||||| |||||    
T  27684 ttggtcccttaacttattttttggtttcgatttggttccttaactattaaaagtttc 27740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 96 - 168
Target Start/End: Original strand, 8383 - 8455
Alignment:
Q  96 catcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcc 168  Q
    ||||| ||||||||||||||||||||  ||||||| |||  |||| ||||||| ||  || ||||||||||||    
T  8383 catcatttggtcccttaacttatttttggttttcactttgctcccctaactataaactgtctcaaattggtcc 8455  T

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Target: scaffold0084 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0084
Description:

Target: scaffold0084; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 93 - 173
Target Start/End: Original strand, 11707 - 11787
Alignment:
Q  93 atacatcagttggtcccttaacttattttcagttttcaatttagtcccttaactattaaacgtttcaaattggtcctttat 173  Q
    |||||||  ||||||||||||||||||||   |||||| ||||||||| ||| ||| ||  ||||||| ||||||| ||||    
T  11707 atacatcgtttggtcccttaacttattttttattttcagtttagtcccctaattataaagtgtttcaatttggtcccttat 11787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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