View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20812_high_6 (Length: 324)
Name: NF20812_high_6
Description: NF20812
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20812_high_6 |
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Alignment Details
Target: chr8 (Bit Score: 195; Significance: 1e-106; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 15 - 274
Target Start/End: Original strand, 26776298 - 26776556
Alignment:
| Q |
15 |
agatgaacacaggtctgtttatctttgctttgctttgctttggaa----atttgtttttagattgttattatttacaacttacatgcatggctgttaata |
110 |
Q |
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| T |
26776298 |
agatgaacacaggtctgtttatcttt-----gctttgctttggtaacttaattgtttttagattgttgttatttacaacttacattcatggctgttaata |
26776392 |
T |
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| Q |
111 |
acataataatgataagatactaattaaggtgaagctttcggtcttttggtgttggctggagaccttggagtgtgctctatcaaggtcttagagactcgat |
210 |
Q |
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||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26776393 |
acataataatgataagatactaattaaggtgaagctttcagtctttaggtgttggctggagaccttggagtgtgctctatcaaggtcttagagactcgat |
26776492 |
T |
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| Q |
211 |
tatctcgggtgctagtttagggtttagggtttgagtttcttgaattagttttgatggactcctt |
274 |
Q |
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||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26776493 |
tatctcgattgctagtttagggtttagggtttgagtttcttgaattagttttgatggactcctt |
26776556 |
T |
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