View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20814_low_13 (Length: 212)
Name: NF20814_low_13
Description: NF20814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20814_low_13 |
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Alignment Details
Target: chr6 (Bit Score: 159; Significance: 7e-85; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 159; E-Value: 7e-85
Query Start/End: Original strand, 26 - 192
Target Start/End: Original strand, 35170818 - 35170984
Alignment:
| Q |
26 |
attatactaccgagccttcagaaactgggtcctccttaaaaggtttacctttgctctctttttgaattttgatatcaatattacttttggtttgaataag |
125 |
Q |
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| T |
35170818 |
attatactaccgagccttcggaaactgggtcctccttaaaaggtttacctttgctctctttttgaattttgatatcaatattacttttggtttgaataag |
35170917 |
T |
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| Q |
126 |
gatatatacatatgatagtattatacgtcctaattagatagtattcttgtttatattcatcttaatt |
192 |
Q |
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|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35170918 |
gatatatacatatggtagtattatacgtcctaattagatagtattcttgtttatattcatcttaatt |
35170984 |
T |
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