View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20814_low_5 (Length: 379)

Name: NF20814_low_5
Description: NF20814
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20814_low_5
NF20814_low_5
[»] chr7 (24 HSPs)
chr7 (95-306)||(44845247-44845459)
chr7 (167-306)||(27062410-27062549)
chr7 (171-306)||(30839284-30839419)
chr7 (164-302)||(29157161-29157299)
chr7 (167-306)||(2471803-2471942)
chr7 (168-306)||(43218091-43218229)
chr7 (164-303)||(31425820-31425958)
chr7 (168-306)||(42908177-42908315)
chr7 (168-306)||(29015105-29015243)
chr7 (168-306)||(32546000-32546138)
chr7 (168-306)||(37103274-37103412)
chr7 (1-101)||(44845053-44845153)
chr7 (168-306)||(22962372-22962510)
chr7 (164-306)||(28309301-28309443)
chr7 (168-306)||(18683782-18683920)
chr7 (167-306)||(27062951-27063087)
chr7 (164-306)||(21750594-21750736)
chr7 (328-362)||(44845481-44845515)
chr7 (1-41)||(7780083-7780123)
chr7 (1-41)||(10072541-10072581)
chr7 (1-41)||(17851927-17851967)
chr7 (1-37)||(31426083-31426119)
chr7 (1-41)||(35074545-35074585)
chr7 (1-41)||(38152962-38153002)
[»] chr4 (23 HSPs)
chr4 (164-306)||(10574569-10574711)
chr4 (168-306)||(30266478-30266617)
chr4 (168-306)||(30285571-30285710)
chr4 (164-306)||(16216797-16216939)
chr4 (164-306)||(18423399-18423541)
chr4 (193-306)||(1866760-1866873)
chr4 (164-306)||(568226-568368)
chr4 (168-306)||(15733666-15733804)
chr4 (168-306)||(21544388-21544526)
chr4 (169-299)||(29527629-29527759)
chr4 (168-277)||(24637032-24637141)
chr4 (169-280)||(45065084-45065195)
chr4 (172-306)||(31782424-31782558)
chr4 (164-306)||(47103542-47103684)
chr4 (168-306)||(11172777-11172916)
chr4 (168-306)||(30672772-30672910)
chr4 (203-306)||(14606091-14606194)
chr4 (251-305)||(41915199-41915253)
chr4 (251-306)||(31416144-31416199)
chr4 (168-221)||(41915133-41915186)
chr4 (5-41)||(11122848-11122884)
chr4 (5-37)||(14605908-14605940)
chr4 (1-41)||(44317611-44317651)
[»] chr8 (13 HSPs)
chr8 (164-303)||(40789395-40789534)
chr8 (168-306)||(2183775-2183913)
chr8 (164-306)||(4594278-4594420)
chr8 (168-306)||(2190017-2190155)
chr8 (179-306)||(15174007-15174134)
chr8 (168-306)||(15068734-15068872)
chr8 (168-306)||(8030943-8031081)
chr8 (168-286)||(10297280-10297398)
chr8 (216-302)||(14507578-14507664)
chr8 (1-41)||(6388494-6388534)
chr8 (5-41)||(20399666-20399702)
chr8 (1-41)||(27932483-27932523)
chr8 (1-41)||(32303131-32303171)
[»] chr6 (9 HSPs)
chr6 (164-306)||(9458123-9458265)
chr6 (168-306)||(29200032-29200170)
chr6 (168-306)||(18908697-18908835)
chr6 (164-258)||(9458516-9458610)
chr6 (1-41)||(30986323-30986363)
chr6 (1-41)||(5863361-5863401)
chr6 (1-41)||(10188058-10188098)
chr6 (1-41)||(27738842-27738882)
chr6 (1-37)||(28079678-28079714)
[»] chr2 (17 HSPs)
chr2 (164-303)||(4427731-4427870)
chr2 (164-306)||(38342661-38342803)
chr2 (164-306)||(30978729-30978871)
chr2 (173-306)||(43371360-43371493)
chr2 (172-303)||(24051767-24051898)
chr2 (169-303)||(14331334-14331468)
chr2 (193-306)||(18485449-18485562)
chr2 (169-306)||(44057678-44057815)
chr2 (168-306)||(6164625-6164763)
chr2 (164-306)||(42576416-42576558)
chr2 (169-303)||(3546973-3547107)
chr2 (168-306)||(26755562-26755695)
chr2 (1-41)||(12341671-12341711)
chr2 (1-41)||(37106763-37106803)
chr2 (1-39)||(10212477-10212515)
chr2 (1-41)||(30847017-30847057)
chr2 (1-41)||(44746087-44746127)
[»] chr1 (12 HSPs)
chr1 (164-303)||(37032147-37032286)
chr1 (164-306)||(12718908-12719050)
chr1 (164-303)||(17516232-17516373)
chr1 (164-303)||(10450202-10450341)
chr1 (168-306)||(19003801-19003939)
chr1 (164-306)||(16237447-16237589)
chr1 (164-306)||(19892779-19892921)
chr1 (176-303)||(48024422-48024549)
chr1 (172-306)||(35077340-35077473)
chr1 (1-41)||(24236739-24236779)
chr1 (1-41)||(36187198-36187238)
chr1 (1-41)||(40087442-40087482)
[»] scaffold0008 (2 HSPs)
scaffold0008 (169-306)||(67552-67689)
scaffold0008 (169-306)||(75395-75532)
[»] scaffold0059 (1 HSPs)
scaffold0059 (164-306)||(69898-70040)
[»] scaffold0013 (2 HSPs)
scaffold0013 (164-306)||(105612-105754)
scaffold0013 (164-300)||(128264-128399)
[»] chr3 (12 HSPs)
chr3 (164-306)||(1772542-1772684)
chr3 (164-299)||(23329974-23330109)
chr3 (168-306)||(2487598-2487736)
chr3 (164-303)||(40796280-40796419)
chr3 (1-41)||(4557283-4557323)
chr3 (1-41)||(4016022-4016062)
chr3 (1-41)||(6738383-6738423)
chr3 (1-41)||(23154043-23154083)
chr3 (1-41)||(30616259-30616299)
chr3 (1-41)||(44252817-44252857)
chr3 (1-41)||(48390795-48390835)
chr3 (1-41)||(49580134-49580174)
[»] chr5 (16 HSPs)
chr5 (164-305)||(20633985-20634126)
chr5 (164-305)||(20650099-20650240)
chr5 (164-306)||(12915278-12915418)
chr5 (164-303)||(2681023-2681162)
chr5 (164-302)||(10834018-10834156)
chr5 (172-306)||(12250776-12250909)
chr5 (200-306)||(12712684-12712790)
chr5 (164-306)||(23045134-23045276)
chr5 (200-306)||(12773948-12774054)
chr5 (168-306)||(43523564-43523702)
chr5 (164-302)||(34259076-34259206)
chr5 (176-306)||(18116660-18116790)
chr5 (1-41)||(10127144-10127184)
chr5 (1-37)||(23044974-23045010)
chr5 (1-41)||(40517876-40517916)
chr5 (1-37)||(43523818-43523854)
[»] scaffold0015 (1 HSPs)
scaffold0015 (168-306)||(56044-56182)
[»] scaffold0184 (1 HSPs)
scaffold0184 (168-306)||(2772-2910)
[»] scaffold0182 (1 HSPs)
scaffold0182 (168-306)||(16771-16909)
[»] scaffold0005 (2 HSPs)
scaffold0005 (203-306)||(211184-211287)
scaffold0005 (5-37)||(211438-211470)


Alignment Details
Target: chr7 (Bit Score: 159; Significance: 1e-84; HSPs: 24)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 95 - 306
Target Start/End: Original strand, 44845247 - 44845459
Alignment:
Q  95 ttttgtttttgttgaggggtcgataatgatatcatgtcannnnnnnnnn-gttgacaaatatatcatatcatgtcatgttatttggtttgataactatta 193  Q
    |||||||||||||||||||||||||||||||||||||||           ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44845247 ttttgtttttgttgaggggtcgataatgatatcatgtcatttttttttttgttgacaaatatatcatatcatgtcatgttatttggtttgataactatta 44845346  T
Q  194 tgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatatt 293  Q
    ||||| |||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  44845347 tgatataagaactttcatcgatggttaacgaaacaaccaaattattcggtaaggaaatgttaaaatgagcgcaaattcttggataatgaattaaaatatt 44845446  T
Q  294 accattgaagctt 306  Q
    |||||||||||||    
T  44845447 accattgaagctt 44845459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 104; E-Value: 9e-52
Query Start/End: Original strand, 167 - 306
Target Start/End: Original strand, 27062410 - 27062549
Alignment:
Q  167 tcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgta 266  Q
    ||||||||||||||||||||| |||||||||| ||||| |||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |    
T  27062410 tcatgttatttggtttgataattattatgatataagaattttcattgatggttaaaggagcaaccaaattattcggtaaggaaatgttaaaatgagcgca 27062509  T
Q  267 aattcttggataatgaattaaaatattaccattgaagctt 306  Q
    |||||||| |||||| |||| |||||||||||||||||||    
T  27062510 aattcttgaataatgcattacaatattaccattgaagctt 27062549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 84; E-Value: 8e-40
Query Start/End: Original strand, 171 - 306
Target Start/End: Original strand, 30839284 - 30839419
Alignment:
Q  171 gttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaatt 270  Q
    ||||| ||||||||||||||| |||||| |||||||||||||||| ||||| | | ||||||||||||||| |||||||||||||||||||| |||||||    
T  30839284 gttatgtggtttgataactatcatgatataagaactttcattgatagttaaaggatcaaccaaattattcgataaggaaatgttaaaatgagtgtaaatt 30839383  T
Q  271 cttggataatgaattaaaatattaccattgaagctt 306  Q
     |||||||||| |||| || ||||||||||||||||    
T  30839384 gttggataatgcattacaacattaccattgaagctt 30839419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 29157299 - 29157161
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||| ||| | ||||||| |||||||||||||| |||||||||||| | |    
T  29157299 atgtcatgttatttggtttgataactatcatgatataagaactttcattgatggctaaaggagcaaccgaattattcggtaagaaaatgttaaaatcaac 29157200  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaa 302  Q
    | ||||| ||| |||||| |||| |||||||||||||||    
T  29157199 gcaaattattgcataatgcattacaatattaccattgaa 29157161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 2471942 - 2471803
Alignment:
Q  167 tcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgta 266  Q
    ||||||||||||||||||||||||| |||||| ||||||| |||||||||||||| | ||||||||||||||  | || | | |||||||||| |||| |    
T  2471942 tcatgttatttggtttgataactatcatgatataagaactctcattgatggttaaaggagcaaccaaattatctgatatgaagatgttaaaataagcgca 2471843  T
Q  267 aattcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||||||||||||||| |||| |||||||||||||||||||    
T  2471842 aattcttggataatgcattacaatattaccattgaagctt 2471803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 43218229 - 43218091
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||||||| || ||| |||||||||||||||||||||| | ||||||| ||||||||| |||| |||| |||||||||||| ||    
T  43218229 catgttatttggtttgataactatcataatataagaactttcattgatggttaaaggagcaaccgaattattcgataagaaaattttaaaatgagcgcaa 43218130  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||  ||| |||||||||||||||    
T  43218129 attattggataatgcattgcaatgttaccattgaagctt 43218091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 31425958 - 31425820
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| ||||||||||||||  | |||| ||||||||| ||||||||| |||||||||||||||||||||    
T  31425958 atgtcatgttatttggtttgataattgtcatgatataagaactttcattgcag-ttaaagaagcaaccgaattattcgataaggaaatgttaaaatgagc 31425860  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaag 303  Q
    ||||||| |||||||||| |||| || ||||  |||||||    
T  31425859 gtaaattgttggataatgtattacaacattattattgaag 31425820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 42908177 - 42908315
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| |||||||||||  ||| ||||  | ||||||| |||||||||||||  ||||||||||||||||| ||    
T  42908177 catgttatttggtttgataattgtcatgatataagaactttcacggatagttataggagcaaccgaattattcggtaacaaaatgttaaaatgagcgcaa 42908276  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  42908277 attattggataatgcattacaacattaccattgaagctt 42908315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 29015105 - 29015243
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| || |||||| |||||| ||||| | ||||| | |||||||||||||| ||||||||||||||||| ||    
T  29015105 catgttatttggtttgataattgtcatgatataaaaacttttattgatagttaaaggagcaatcgaattattcggtaagaaaatgttaaaatgagcgcaa 29015204  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| ||| |||||  |||| || ||||||||||||||||    
T  29015205 attgttgaataatacattacaacattaccattgaagctt 29015243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 32546138 - 32546000
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||  ||| | | |||||| ||||||||| |||||| ||||| | ||||||| ||||||||| |||||||||||||||||||  ||||    
T  32546138 catgttatttggtttattaattgtcatgatataagaacttttattgatagttaaaggagcaaccgaattattcgttaaggaaatgttaaaatgaatgtaa 32546039  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| ||||| |||| | |||||||||| |||||||||||    
T  32546038 attgttggacaatgcaataaaatattatcattgaagctt 32546000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 37103274 - 37103412
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| || |||||||||||||  |||| | ||||||| ||| |||||||||||||||||||||||||  | ||    
T  37103274 catgttatttggtttgataattgtcatgatataataactttcattgataattaaaggagcaaccgaataattcggtaaggaaatgttaaaatgaatgcaa 37103373  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||| ||||| |||| || ||||||||||||||||    
T  37103374 attgttggctaatgcattataacattaccattgaagctt 37103412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 1 - 101
Target Start/End: Complemental strand, 44845153 - 44845053
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacggnnnnnnnntccgttaaatcggaattcgtttgaacgggtatccataaacatgagttttgt 100  Q
    |||||||||||||||||||||||||||||||||||||||||        ||||| |||||||| ||||||||||||||||| ||| ||||||||||||||    
T  44845153 cggggaaaacccaaacccataccaaaactcagtcaaaacggaaaaaaaatccgtcaaatcggagttcgtttgaacgggtattcatgaacatgagttttgt 44845054  T
Q  101 t 101  Q
    |    
T  44845053 t 44845053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 22962510 - 22962372
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    ||||||||||| |||||||| | | |||||| |||||||||||  ||| ||||| | | ||||| |||||||||||||  |||| |||||||||||| ||    
T  22962510 catgttatttgatttgataattgtcatgatataagaactttcacggatagttaaaggatcaaccgaattattcggtaacaaaattttaaaatgagcgcaa 22962411  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  22962410 attgttggataatgcattacaacattaccattgaagctt 22962372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 28309443 - 28309301
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||| ||||||||| | | |||||| |||||| ||||||||| ||| | | |||||||||||| || | |||||||||||||||||||||    
T  28309443 atgtcatgttatttagtttgataattgtcatgatataagaacattcattgatagttgaaggagcaaccaaattttttgataaggaaatgttaaaatgagc 28309344  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||  ||  |||||| |||| || ||||||||||||||||    
T  28309343 gcaaatgattacataatgcattacaacattaccattgaagctt 28309301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 18683920 - 18683782
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| ||||| |||||||||| |||||   | ||||   |||||||| |||||||||||||||||||||| ||    
T  18683920 catgttatttggtttgataattgtcatgatataagaattttcattgatagttaaatgatcaactggattattcgataaggaaatgttaaaatgagcgcaa 18683821  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| ||||  | |||| |||||||||||    
T  18683820 attgttggataatgcattactacattatcattgaagctt 18683782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 167 - 306
Target Start/End: Complemental strand, 27063087 - 27062951
Alignment:
Q  167 tcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgta 266  Q
    |||| ||||||||||||||||   || | ||| |||||||||||||||| ||||| | | ||||  |||||||| |||||||||||||||||||| || |    
T  27063087 tcatcttatttggtttgataa---ttctcatataagaactttcattgatagttaaagcaacaactgaattattcagtaaggaaatgttaaaatgaacgaa 27062991  T
Q  267 aattcttggataatgaattaaaatattaccattgaagctt 306  Q
    |||| || ||||||| |||| ||| |||||||||||||||    
T  27062990 aattgttcgataatgcattacaatgttaccattgaagctt 27062951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 21750736 - 21750594
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| | |||||||||||||| |||||   | |||| ||||||||  ||||| |||||||||||||| |    
T  21750736 atgtcatgttatttggtttgataattgtcatgatatatgaactttcattgatagttaaaagaccaactaaattatttagtaagaaaatgttaaaatgaac 21750637  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
      ||||| |||||||||| |||| || |||  |||||||||||    
T  21750636 aaaaattgttggataatgcattacaacattgtcattgaagctt 21750594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 328 - 362
Target Start/End: Original strand, 44845481 - 44845515
Alignment:
Q  328 ttgattcactacggggacggagatgaggcggaaat 362  Q
    |||||||||||||||||||||||||||||||||||    
T  44845481 ttgattcactacggggacggagatgaggcggaaat 44845515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 7780083 - 7780123
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  7780083 cggggaaaacccatacccatacccaaacccagtcaaaacgg 7780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10072541 - 10072581
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  10072541 cggggaaaacccatacccatacccaaacccagtcaaaacgg 10072581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17851927 - 17851967
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  17851927 cggggaaaacccatacccatacccaaacccagtcaaaacgg 17851967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 31426083 - 31426119
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaa 37  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  31426083 cggggaaaacccaaaccaataccaaaacccagtcaaa 31426119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35074545 - 35074585
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  35074545 cggggaaaacccatacccatacccaaacccagtcaaaacgg 35074585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 38152962 - 38153002
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  38152962 cggggaaaacccatacccatacccaaacccagtcaaaacgg 38153002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 103; Significance: 4e-51; HSPs: 23)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 103; E-Value: 4e-51
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 10574569 - 10574711
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||||    
T  10574569 atgtcatgttatttggtttgataactatcatgatataagaactttcgttgatggttaaaggagcaaccaaattattcggtaaggaaatgttaaaatgagc 10574668  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
      |||||||||||||||| |||  |||||||||||||||||||    
T  10574669 acaaattcttggataatgcattgcaatattaccattgaagctt 10574711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 30266478 - 30266617
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacg-aagcaaccaaattattcggtaaggaaatgttaaaatgagcgta 266  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||| |    
T  30266478 catgttatttggtttgataactatcatgatataagaactttcattgatggttaaaggaagcaaccgaattattcagtaaggaaatgttaaaatgagcgca 30266577  T
Q  267 aattcttggataatgaattaaaatattaccattgaagctt 306  Q
    |||| |||||||||| |||| |||||||||||||||||||    
T  30266578 aattattggataatgcattacaatattaccattgaagctt 30266617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 30285710 - 30285571
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacg-aagcaaccaaattattcggtaaggaaatgttaaaatgagcgta 266  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||| | |||||||| |||||||| ||||||||||||||||||||||| |    
T  30285710 catgttatttggtttgataactatcatgatataagaactttcattgatggttaaaggaagcaaccgaattattcagtaaggaaatgttaaaatgagcgca 30285611  T
Q  267 aattcttggataatgaattaaaatattaccattgaagctt 306  Q
    |||| |||||||||| |||| |||||||||||||||||||    
T  30285610 aattattggataatgcattacaatattaccattgaagctt 30285571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 16216797 - 16216939
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| ||| |||||| || || ||| ||| |||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  16216797 atgtcatgttatttggtttgataattatcatgatataaaaagtttaatttatggttaaaggagcaaccaaattattcggtaagaaaatgttaaaatgagc 16216896  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | |||||||||  ||||| |||| ||||||| |||||||||||    
T  16216897 gcaaattcttgagtaatgcattacaatattatcattgaagctt 16216939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 18423541 - 18423399
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||||||||||||||||||||||||  ||||| || ||||||||||||| ||||| | ||||||  ||||||| |||||||||| |||||||| |||    
T  18423541 atgtcatgttatttggtttgataactatcttgatataaaaactttcattgatagttaaaggagcaactgaattatttggtaaggaaaagttaaaataagc 18423442  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| || ||||||| |||| |||||| ||||||||||||    
T  18423441 gcaaattattagataatgcattacaatattgccattgaagctt 18423399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 193 - 306
Target Start/End: Original strand, 1866760 - 1866873
Alignment:
Q  193 atgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatat 292  Q
    |||||| |||||||||||||||| ||||| | ||||||| ||||||||||||||||||| |||||||||||| ||||| |||||||||| |||| || ||    
T  1866760 atgatataagaactttcattgatagttaaaggagcaaccgaattattcggtaaggaaattttaaaatgagcgcaaattgttggataatgcattacaacat 1866859  T
Q  293 taccattgaagctt 306  Q
    ||||||||||||||    
T  1866860 taccattgaagctt 1866873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 568368 - 568226
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||  ||| ||||| | ||||||| |||||||||||||  ||||||||||||||||    
T  568368 atgtcatgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaatgttaaaatgagc 568269  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||  |||| || |||| |||||||||||    
T  568268 gcaaattgttggataatacattataacattagcattgaagctt 568226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 15733666 - 15733804
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | ||||||  ||||||||||||||| ||||| | ||||||| ||||||||| |||||||  |||||||| | || ||    
T  15733666 catgttatttggtttgataattgtcatgatatgagaactttcattgatagttaaaggagcaaccgaattattcgataaggaagggttaaaataaacgcaa 15733765  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| |||||||||||||||||||    
T  15733766 attgttggataatgcattacaatattaccattgaagctt 15733804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 21544526 - 21544388
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| |||||||||||  ||| ||||| | ||| ||| |||||||||||||  ||||||||||||||||| ||    
T  21544526 catgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagctaccgaattattcggtaacaaaatgttaaaatgagcgcaa 21544427  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  21544426 attgttggataatgcattataacattaccattgaagctt 21544388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 299
Target Start/End: Complemental strand, 29527759 - 29527629
Alignment:
Q  169 atgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaa 268  Q
    |||||||||| |||||||| | | |||||| |||||||||||||||| ||||| | |||||| ||||||||||||||||||| |||||||| |||| |||    
T  29527759 atgttatttgatttgataattgtcatgatataagaactttcattgatagttaaaggagcaactaaattattcggtaaggaaaggttaaaataagcgcaaa 29527660  T
Q  269 ttcttggataatgaattaaaatattaccatt 299  Q
    || |||||||||| |||| || |||||||||    
T  29527659 ttgttggataatgcattacaacattaccatt 29527629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 24637141 - 24637032
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| |||||||||||||||| ||||| ||||||||  |||||||||||||||||||||||||||||| | ||    
T  24637141 catgttatttggtttgataattgtcatgatataagaactttcattgatagttaaagaagcaactgaattattcggtaaggaaatgttaaaatgagtgcaa 24637042  T
Q  268 attcttggat 277  Q
    ||| ||||||    
T  24637041 attgttggat 24637032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 169 - 280
Target Start/End: Complemental strand, 45065195 - 45065084
Alignment:
Q  169 atgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaa 268  Q
    ||||||||||||||||||| | | |||||| | |||||||||||||| ||||| | || |||||||||||||||||| ||||||||||||||| |  |||    
T  45065195 atgttatttggtttgataattgtcatgatatacgaactttcattgatagttaaaggagaaaccaaattattcggtaaagaaatgttaaaatgaacacaaa 45065096  T
Q  269 ttcttggataat 280  Q
    || |||||||||    
T  45065095 ttattggataat 45065084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 172 - 306
Target Start/End: Complemental strand, 31782558 - 31782424
Alignment:
Q  172 ttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattc 271  Q
    |||||||||||||||| | | |||||| |||||||||||||||| |||||   ||||||  ||||||||  ||||||||||||||||||| |  | |||     
T  31782558 ttatttggtttgataattgtcatgatataagaactttcattgatagttaaaagagcaactgaattattcaataaggaaatgttaaaatgaacacagattg 31782459  T
Q  272 ttggataatgaattaaaatattaccattgaagctt 306  Q
    || ||||||| |||| |||||||||||||||||||    
T  31782458 ttcgataatgcattacaatattaccattgaagctt 31782424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 47103684 - 47103542
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||| ||||||||||||||||||| |   |||||| ||||||||| |||||| ||||| | || |||  ||||||||||||||||||||||||||||| |    
T  47103684 atgttatgttatttggtttgataattggcatgatataagaacttttattgatagttaaaggagaaactgaattattcggtaaggaaatgttaaaatgaac 47103585  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||  | || || |||| |||||||||||    
T  47103584 gcaaatttttggataatacaatacaaaattatcattgaagctt 47103542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 11172916 - 11172777
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgtt-aaaatgagcgta 266  Q
    |||||||||||||||||||| | | |||||| |||||||||||  ||| ||||| | ||||||| |||||||||||||  |||| || ||||| || | |    
T  11172916 catgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaaataagtgca 11172817  T
Q  267 aattcttggataatgaattaaaatattaccattgaagctt 306  Q
    |||| |||||||||| |||| || ||||||||||||||||    
T  11172816 aattgttggataatgcattacaacattaccattgaagctt 11172777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 30672910 - 30672772
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||| | | | |||||| |||||||||||   || ||||| | ||||||| |||||||||||||  |||||||||||| |||| ||    
T  30672910 catgttatttggtttgatgattgtcatgatataagaactttcacgaatagttaaaggagcaaccgaattattcggtaacaaaatgttaaaataagcgcaa 30672811  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| ||| |||||| |||| || |||| |||||||||||    
T  30672810 attgttgaataatgcattacaacattatcattgaagctt 30672772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 306
Target Start/End: Original strand, 14606091 - 14606194
Alignment:
Q  203 aactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatattaccattgaa 302  Q
    ||||||||| ||| ||||| | ||||||| |||||||||||||| ||||| |||||| |||| ||||| |||||||||  |||| || ||||| ||||||    
T  14606091 aactttcatcgatagttaaaggagcaaccgaattattcggtaagaaaatgataaaatcagcgcaaattgttggataatccattacaacattacaattgaa 14606190  T
Q  303 gctt 306  Q
    ||||    
T  14606191 gctt 14606194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 251 - 305
Target Start/End: Original strand, 41915199 - 41915253
Alignment:
Q  251 tgttaaaatgagcgtaaattcttggataatgaattaaaatattaccattgaagct 305  Q
    |||||||||||||| |||||  ||||||||| |||| ||||||||||||||||||    
T  41915199 tgttaaaatgagcgcaaattgctggataatgcattacaatattaccattgaagct 41915253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 251 - 306
Target Start/End: Original strand, 31416144 - 31416199
Alignment:
Q  251 tgttaaaatgagcgtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    |||||||||||||| ||||| |||||||||| |||| || |||| |||||||||||    
T  31416144 tgttaaaatgagcgcaaattgttggataatgcattacaacattatcattgaagctt 31416199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 221
Target Start/End: Original strand, 41915133 - 41915186
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaa 221  Q
    |||||||||||||||||||| | | |||||| ||||||||||| |||| |||||    
T  41915133 catgttatttggtttgataattgtcatgatataagaactttcactgatagttaa 41915186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Complemental strand, 11122884 - 11122848
Alignment:
Q  5 gaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||| ||||||||| |||||||||||||||||    
T  11122884 gaaaacccatacccatacccaaactcagtcaaaacgg 11122848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Complemental strand, 14605940 - 14605908
Alignment:
Q  5 gaaaacccaaacccataccaaaactcagtcaaa 37  Q
    ||||||||||||||||||| |||||||||||||    
T  14605940 gaaaacccaaacccatacccaaactcagtcaaa 14605908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44317611 - 44317651
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  44317611 cggggaaaacccatacccatacccaaacccagtcaaaacgg 44317651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 100; Significance: 2e-49; HSPs: 13)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 40789534 - 40789395
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||||| | ||||| |||||||||||||||||||||||    
T  40789534 atgtcatgttatttggtttgataactatcatgatataagaactttcattgatggttaaaggagcaaccgagttatttggtaaggaaatgttaaaatgagc 40789435  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaag 303  Q
    | |||||||||||||||| |||| ||||||||||||||||    
T  40789434 gcaaattcttggataatgcattataatattaccattgaag 40789395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 2183775 - 2183913
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| |||||||||||| ||| ||||| | ||||||| |||||||||||||  |||| |||||||||||| ||    
T  2183775 catgttatttggtttgataattgtcatgatataagaactttcatggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaatgagcgcaa 2183874  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  2183875 attgttggataatgcattacaacattaccattgaagctt 2183913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 4594278 - 4594420
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||| | ||||||| ||||||||| |||| ||||||||||||||||    
T  4594278 atgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggagcaaccgaattattcgttaagaaaatgttaaaatgagc 4594377  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
      ||||| |||||||||  |||| || |||| |||||||||||    
T  4594378 acaaattgttggataattcattacaacattatcattgaagctt 4594420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 2190017 - 2190155
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| |||||||||||  ||| ||||| | ||||||| |||||||||||||  |||| |||||||||||| ||    
T  2190017 catgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcggtaacaaaattttaaaatgagcgcaa 2190116  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  2190117 attgttggataatgcattacaacattaccattgaagctt 2190155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 179 - 306
Target Start/End: Original strand, 15174007 - 15174134
Alignment:
Q  179 gtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggata 278  Q
    ||||||||| | | |||||| |||||||||||||||| ||||| | ||||||| |||||||||||||||| ||||||||||||||  ||||| |||||||    
T  15174007 gtttgataattgtcatgatataagaactttcattgatagttaaaggagcaaccgaattattcggtaaggagatgttaaaatgagcacaaattgttggata 15174106  T
Q  279 atgaattaaaatattaccattgaagctt 306  Q
    ||| |||| ||  |||||||||||||||    
T  15174107 atgcattacaacgttaccattgaagctt 15174134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 15068734 - 15068872
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| ||||| |||||||||| | ||| | | ||||| ||||||||  ||||||||||||||||||| || ||    
T  15068734 catgttatttggtttgataattgtcatgatataagaattttcattgataggtaaaggatcaaccgaattattcaataaggaaatgttaaaatgaacgcaa 15068833  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || |||| |||||||||||    
T  15068834 attgttggataatgcattacaacattatcattgaagctt 15068872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 8031081 - 8030943
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | |||||||| ||||| |||||||| |  |||| | || |||  ||||||| ||||||||||||||||||| |||| ||    
T  8031081 catgttatttggtttgataattgttatgatataagaaatttcattggtaattaaaggagaaactgaattatttggtaaggaaatgttaaaataagcgcaa 8030982  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
     || |||||||||| || | || ||||||||||||||||    
T  8030981 gttgttggataatgcatcagaacattaccattgaagctt 8030943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 168 - 286
Target Start/End: Complemental strand, 10297398 - 10297280
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||| ||| | |||||| ||||||||||| |||| ||||| | || |||| |||||||||||||| ||||||||||||||  | ||    
T  10297398 catgttatttggtttgatgactgtgatgatataagaactttcactgatagttaaaggagaaaccgaattattcggtaagaaaatgttaaaatgaatgcaa 10297299  T
Q  268 attcttggataatgaatta 286  Q
    ||| |||||||||| ||||    
T  10297298 attgttggataatgcatta 10297280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 216 - 302
Target Start/End: Original strand, 14507578 - 14507664
Alignment:
Q  216 ggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatattaccattgaa 302  Q
    |||||| | |||||||||||||||||  ||||||||||||||||||||||||||| |||||||||  |||| || ||||||||||||    
T  14507578 ggttaaaggagcaaccaaattattcgacaaggaaatgttaaaatgagcgtaaattgttggataatacattacaacattaccattgaa 14507664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6388534 - 6388494
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||| ||||||||||||||| |||||||||||||||||    
T  6388534 cggggaagacccaaacccatacccaaactcagtcaaaacgg 6388494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 20399666 - 20399702
Alignment:
Q  5 gaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||||||||| |||| ||||||||||||    
T  20399666 gaaaacccaaacccatacccaaacccagtcaaaacgg 20399702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27932483 - 27932523
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  27932483 cggggaaaacccatacccatacccaaacccagtcaaaacgg 27932523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 32303131 - 32303171
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  32303131 cggggaaaacccatacccatacccaaacccagtcaaaacgg 32303171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 99; Significance: 9e-49; HSPs: 9)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 99; E-Value: 9e-49
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 9458265 - 9458123
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||| |||||||||||| | |||||||||||||||||||||| ||||||||||||||||    
T  9458265 atgtcatgttatttggtttgataattatcatgatataagaacttttattgatggttaaaggagcaaccaaattattcggtaagaaaatgttaaaatgagc 9458166  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||||||| |||||| |||| |||||||||||||||||||    
T  9458165 gcaaattcttgaataatgcattacaatattaccattgaagctt 9458123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 29200032 - 29200170
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| |||||||||||||||| ||||| | | ||||| |||||| ||||||||||||||||||| | ||| ||    
T  29200032 catgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaacaaccgaattatgcggtaaggaaatgttaaaacgggcgcaa 29200131  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  29200132 atttttggataatgcattacaacattaccattgaagctt 29200170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 18908835 - 18908697
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||| ||||||| | | |||||| |||||||||||||||| ||||| | ||||||| ||||||||| |||| |||||| ||||| |||| ||    
T  18908835 catgttatttggattgataattgtcatgatataagaactttcattgatagttaaaggagcaaccgaattattcgataagaaaatgtcaaaattagcgcaa 18908736  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||  |||| || ||||||||||||||||    
T  18908735 attattggataatccattacaaaattaccattgaagctt 18908697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 164 - 258
Target Start/End: Complemental strand, 9458610 - 9458516
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaa 258  Q
    ||||||| |||||||||||||||| | | |||||| |||||||||||||||| ||||| | | ||||| ||||||||||||||||||||||||||    
T  9458610 atgtcatcttatttggtttgataattctcatgatataagaactttcattgatagttaaaggaacaaccgaattattcggtaaggaaatgttaaaa 9458516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30986323 - 30986363
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  30986323 cggggaaaacccatacccatacccaaactcagtcaaaacgg 30986363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5863401 - 5863361
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  5863401 cggggaaaacccatacccatacccaaacccagtcaaaacgg 5863361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10188098 - 10188058
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  10188098 cggggaaaacccatacccatacccaaacccagtcaaaacgg 10188058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 27738842 - 27738882
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  27738842 cggggaaaacccatacccatacctaaacccagtcaaaacgg 27738882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 28079714 - 28079678
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaa 37  Q
    ||||||||||||||||||||||| |||||||| ||||    
T  28079714 cggggaaaacccaaacccatacccaaactcagccaaa 28079678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 96; Significance: 5e-47; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 4427870 - 4427731
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| | ||||||  ||||||||| |||||||||||||||||||||    
T  4427870 atgtcatgttatttggtttgataactatcatgatataagaactttcattgatggttaaaggagcaacttaattattcgataaggaaatgttaaaatgagc 4427771  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaag 303  Q
    | ||||| |||||||||| |||| ||||||||||||||||    
T  4427770 gcaaattattggataatgtattacaatattaccattgaag 4427731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 38342661 - 38342803
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||| | ||||||| ||| ||||||||||||||||||||||||| |    
T  38342661 atgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggagcaaccgaataattcggtaaggaaatgttaaaatgaac 38342760  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||| |||| || ||||||||||||||||    
T  38342761 gcaaattgttggataatgcattacaaaattaccattgaagctt 38342803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 30978871 - 30978729
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||| | ||||||  ||||||||| |||| ||||||||||||||||    
T  30978871 atgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggagcaactgaattattcgataagaaaatgttaaaatgagc 30978772  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||||||| ||||| |||| |||| || ||||||||||||||||    
T  30978771 gtaaattgttggacaatgcattacaacattaccattgaagctt 30978729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 74; E-Value: 7e-34
Query Start/End: Original strand, 173 - 306
Target Start/End: Complemental strand, 43371493 - 43371360
Alignment:
Q  173 tatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattct 272  Q
    ||||||||||||||| | | |||||| |||||||||||||||| ||||| | || |||| |||||||||||||| ||||||||||||||||| ||||| |    
T  43371493 tatttggtttgataattgtcatgatataagaactttcattgatagttaaaggagaaaccgaattattcggtaagaaaatgttaaaatgagcgcaaattgt 43371394  T
Q  273 tggataatgaattaaaatattaccattgaagctt 306  Q
    ||||||||| |||| || ||||||||||||||||    
T  43371393 tggataatgcattacaacattaccattgaagctt 43371360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 172 - 303
Target Start/End: Original strand, 24051767 - 24051898
Alignment:
Q  172 ttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattc 271  Q
    |||||||||||||||  | | |||||| |||||||||||||||| ||||| | |||||||||||||||||||||| ||||||||||||||||| |||||     
T  24051767 ttatttggtttgatagttgtgatgatataagaactttcattgatagttaaaggagcaaccaaattattcggtaagaaaatgttaaaatgagcgcaaattg 24051866  T
Q  272 ttggataatgaattaaaatattaccattgaag 303  Q
    |||||||||| |||| || |||| ||||||||    
T  24051867 ttggataatgcattataacattatcattgaag 24051898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 169 - 303
Target Start/End: Complemental strand, 14331468 - 14331334
Alignment:
Q  169 atgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaa 268  Q
    ||||||||||||||||||| ||  |||||| |||||||||||||||| ||||| | ||||||  |||| |||| |||||||||||||||||||||| |||    
T  14331468 atgttatttggtttgataattaacatgatataagaactttcattgatagttaaaggagcaactgaattgttcgataaggaaatgttaaaatgagcgcaaa 14331369  T
Q  269 ttcttggataatgaattaaaatattaccattgaag 303  Q
    || |||||||||| || | || |||||||||||||    
T  14331368 ttgttggataatgcatcataacattaccattgaag 14331334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 193 - 306
Target Start/End: Complemental strand, 18485562 - 18485449
Alignment:
Q  193 atgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatat 292  Q
    |||||| ||||| |||||||||| ||||| | ||||||| ||||||||||||||||||||||||||||| || ||||| || ||||||| |||| |||||    
T  18485562 atgatataagaattttcattgatagttaaaggagcaaccgaattattcggtaaggaaatgttaaaatgaacgcaaattgttcgataatgcattataatat 18485463  T
Q  293 taccattgaagctt 306  Q
    ||||||||||||||    
T  18485462 taccattgaagctt 18485449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 44057815 - 44057678
Alignment:
Q  169 atgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaa 268  Q
    ||||||||||||||||||| | | |||||| ||||||||| |  ||| ||||| ||||||||| |||||||||||||  |||| ||||||||| ||||||    
T  44057815 atgttatttggtttgataattgtcatgatataagaacttttacggatagttaaagaagcaaccgaattattcggtaacaaaattttaaaatgaacgtaaa 44057716  T
Q  269 ttcttggataatgaattaaaatattaccattgaagctt 306  Q
    || |||||||||| |||| || ||||||||||||||||    
T  44057715 ttgttggataatgcattacaacattaccattgaagctt 44057678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 6164625 - 6164763
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    ||||||||||| |||||||| | | |||||| | |||||||||||||| ||||| | ||||||||||||||||| |||| ||||||||||| ||| | |     
T  6164625 catgttatttgatttgataattgtcatgatatatgaactttcattgatagttaaaggagcaaccaaattattcgataagaaaatgttaaaaagagtgaat 6164724  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  6164725 attgttggataatgcattacaacattaccattgaagctt 6164763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 42576558 - 42576416
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||  ||| ||||| | ||||| | ||||||| |||||  |||| |||||||||||    
T  42576558 atgtcatgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaatcgaattatttggtaacaaaattttaaaatgagc 42576459  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||| |||| || ||||||||||||||||    
T  42576458 gcaaattgttggataatgcattacaacattaccattgaagctt 42576416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 169 - 303
Target Start/End: Complemental strand, 3547107 - 3546973
Alignment:
Q  169 atgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaa 268  Q
    ||||||||||||||||||| | | |||||| |  |||||| |||||| ||||| | || |||  |||||||||||||  |||||||||||||| || |||    
T  3547107 atgttatttggtttgataattgtcatgatatacaaacttttattgatagttaaaggagaaactgaattattcggtaaataaatgttaaaatgaacgcaaa 3547008  T
Q  269 ttcttggataatgaattaaaatattaccattgaag 303  Q
    || |||||||||| |||| ||||||||| ||||||    
T  3547007 ttgttggataatgcattacaatattacctttgaag 3546973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 26755695 - 26755562
Alignment:
Q  168 catgttatttggtttgataactattatgatacaa-gaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgta 266  Q
    |||||||||||||||||||| | | |||||| || |||||||||||||| ||||| | ||||||  |||| ||||||||| |||||||||||||| ||      
T  26755695 catgttatttggtttgataattgtcatgatataaagaactttcattgatagttaaaggagcaactgaatttttcggtaagtaaatgttaaaatgaacg-- 26755598  T
Q  267 aattcttggataatgaattaaaatattaccattgaagctt 306  Q
        ||||| ||||| | || |||||||||||||||||||    
T  26755597 ----cttgggtaatgcactacaatattaccattgaagctt 26755562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12341671 - 12341711
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  12341671 cggggaaaacccatacccatacccaaactcagtcaaaacgg 12341711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 37106763 - 37106803
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  37106763 cggggaaaacccatacccatacccaaactcagtcaaaacgg 37106803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 10212477 - 10212515
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaac 39  Q
    |||||||||||||||| ||||||||||| ||||||||||    
T  10212477 cggggaaaacccaaactcataccaaaacccagtcaaaac 10212515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 30847017 - 30847057
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  30847017 cggggaaaacccatacccatacccaaacccagtcaaaacgg 30847057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 44746127 - 44746087
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||||| ||||||| ||||||| |||||||||    
T  44746127 cggggaaaacccaaatccatacccaaactcaatcaaaacgg 44746087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 88; Significance: 3e-42; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 37032286 - 37032147
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||| | ||||||| |||||||||||||| ||||||||||||||||    
T  37032286 atgtcatgttatttggtttgataactatcatgatataagaattttcattgatggttaaaggagcaaccgaattattcggtaagaaaatgttaaaatgagc 37032187  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaag 303  Q
    | ||||| || ||||||| |||| |||||||| |||||||    
T  37032186 gcaaattattcgataatgtattacaatattactattgaag 37032147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 12718908 - 12719050
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| ||| |||||| |||||||||||||||| ||||| | || |||  | |||||||||||| |||| |||||||||||    
T  12718908 atgtcatgttatttggtttgataattatcatgatataagaactttcattgatcgttaaaggagaaactgagttattcggtaagaaaatattaaaatgagc 12719007  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||| |||| |||||||||||||||||||    
T  12719008 gcaaatttttggataatgcattataatattaccattgaagctt 12719050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 17516373 - 17516232
Alignment:
Q  164 atgtcatgttatttggtttgataactat--tatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatga 261  Q
    ||||||||||||||||||||||||||||  ||||||| ||||||||| ||| |||||||| | || || ||||||||| |||||| | |||||||||| |    
T  17516373 atgtcatgttatttggtttgataactatcatatgatataagaacttttattaatggttaaaggagaaatcaaattattaggtaagaagatgttaaaatca 17516274  T
Q  262 gcgtaaattcttggataatgaattaaaatattaccattgaag 303  Q
    ||| |||||||||||||||| |||| ||||||||||||||||    
T  17516273 gcgcaaattcttggataatgcattacaatattaccattgaag 17516232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 10450202 - 10450341
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||||||||||||||| |||| | | |||||| ||||||||| |||||| ||||| | || |||| ||||||||| ||||||||||||||||||| |    
T  10450202 atgtcatgttatttggtttaataattgtcatgatataagaacttttattgatagttaaaggagaaaccgaattattcgataaggaaatgttaaaatgaac 10450301  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaag 303  Q
    | ||||| |||||||||| |||| ||||||||||||||||    
T  10450302 gcaaattgttggataatgcattacaatattaccattgaag 10450341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 19003801 - 19003939
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| ||||| |||||||||| ||||| | | ||||| ||||| ||| |||||||||||||||||||||| ||    
T  19003801 catgttatttggtttgataattgtcatgatataagaattttcattgatagttaaaggatcaaccgaattaatcgataaggaaatgttaaaatgagcgcaa 19003900  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| || ||||||||||||||||    
T  19003901 attgttggataatgcattacaacattaccattgaagctt 19003939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 16237447 - 16237589
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| | ||| |||||||||| ||||| | ||||| | |||||||||||| | |||||||||||| | |    
T  16237447 atgtcatgttatttggtttgataattgtcatgatataggaattttcattgatagttaaaggagcaatcgaattattcggtatgaaaatgttaaaataaac 16237546  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||| |||| |||||||||||||||||||    
T  16237547 gcaaattgttggataatgcattataatattaccattgaagctt 16237589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 19892921 - 19892779
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||| |||||||||||||||| | | |||||| ||||| ||||||||||  |||| | ||||||| ||||||| ||||||||||||||||||||| |    
T  19892921 atgtcatcttatttggtttgataattgtcatgatataagaaatttcattgataattaaaggagcaaccgaattatttggtaaggaaatgttaaaatgaac 19892822  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| || ||||||| |||| ||||||| |||||||||||    
T  19892821 gaaaattgttcgataatgcattacaatattatcattgaagctt 19892779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 176 - 303
Target Start/End: Original strand, 48024422 - 48024549
Alignment:
Q  176 ttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttgg 275  Q
    |||||||||||| | | |||||| || ||||||||||||| |||||   ||||||| ||||||||| |||| |||||||||||| || ||||||| |||     
T  48024422 ttggtttgataattgtcatgatataaaaactttcattgatagttaaatgagcaaccgaattattcgataagaaaatgttaaaataagtgtaaattgttga 48024521  T
Q  276 ataatgaattaaaatattaccattgaag 303  Q
    |||||| |||| || |||||||||||||    
T  48024522 ataatgcattacaacattaccattgaag 48024549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 172 - 306
Target Start/End: Original strand, 35077340 - 35077473
Alignment:
Q  172 ttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattc 271  Q
    |||||||||||||| | | | |||| | | ||||||||| |||| ||||| | ||||||| |||||| ||| ||| ||||||||||||||||| |||||     
T  35077340 ttatttggtttgattattgtcatgacatatgaactttcactgatagttaaaggagcaaccgaattat-cggaaagaaaatgttaaaatgagcgcaaattg 35077438  T
Q  272 ttggataatgaattaaaatattaccattgaagctt 306  Q
    |||||||||| |||| || ||||||||||||||||    
T  35077439 ttggataatgcattacaacattaccattgaagctt 35077473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24236779 - 24236739
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  24236779 cggggaaaacccatacccatacctaaacccagtcaaaacgg 24236739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 36187238 - 36187198
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  36187238 cggggaaaacccatacccatacccaaacccagtcaaaacgg 36187198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40087482 - 40087442
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    |||||||||| || ||||||||| |||||||||||||||||    
T  40087482 cggggaaaactcatacccatacccaaactcagtcaaaacgg 40087442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 67689 - 67552
Alignment:
Q  169 atgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaa 268  Q
    |||||||||| |||||||| | | |||||| |||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||    
T  67689 atgttatttgatttgataattgtcatgatataagaactttcattgatggttaaaggagcaacataattattcggtaaggaaatgttaaaatgagcgtaaa 67590  T
Q  269 ttcttggataatgaattaaaatattaccattgaagctt 306  Q
    || |||||||||| |||| || ||||||| ||||||||    
T  67589 ttgttggataatgcattagaacattaccagtgaagctt 67552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 169 - 306
Target Start/End: Complemental strand, 75532 - 75395
Alignment:
Q  169 atgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaa 268  Q
    |||||||||| |||||||| | | |||||| |||||||||||||||||||||| | ||||||  ||||||||||||||||||||||||||||||||||||    
T  75532 atgttatttgatttgataattgtcatgatataagaactttcattgatggttaaaggagcaacataattattcggtaaggaaatgttaaaatgagcgtaaa 75433  T
Q  269 ttcttggataatgaattaaaatattaccattgaagctt 306  Q
    || |||||||||| |||| || ||||||| ||||||||    
T  75432 ttgttggataatgcattagaacattaccagtgaagctt 75395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0059 (Bit Score: 79; Significance: 8e-37; HSPs: 1)
Name: scaffold0059
Description:

Target: scaffold0059; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 70040 - 69898
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||| | ||||||| || | |||||||||||||||||||||||| |    
T  70040 atgtcatgttatttggtttgatagctatcttgatataagaaatttcattgatggttaagggagcaaccgaacttttcggtaaggaaatgttaaaatgacc 69941  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
      ||||| || ||||||| ||||||||||||||||||||||||    
T  69940 acaaattgttagataatgcattaaaatattaccattgaagctt 69898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 79; Significance: 8e-37; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 105612 - 105754
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||||||||||||||||||| ||||  ||||| ||||| |||||||||||||||| | ||||||| || | |||||||||||||||||||||||| |    
T  105612 atgtcatgttatttggtttgatagctatcttgatataagaaatttcattgatggttaagggagcaaccgaacttttcggtaaggaaatgttaaaatgacc 105711  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
      ||||| || ||||||| ||||||||||||||||||||||||    
T  105712 acaaattattagataatgcattaaaatattaccattgaagctt 105754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 164 - 300
Target Start/End: Original strand, 128264 - 128399
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||||||||||||||||||| ||||  ||||| ||||| ||||||| |||||||| | ||||||| |||| |||||||||||||||||||||||| |    
T  128264 atgtcatgttatttggtttgatagctatcttgatataagaaatttcattaatggttaaaggagcaacctaatttttcggtaaggaaatgttaaaatgacc 128363  T
Q  264 gtaaattcttggataatgaattaaaatattaccattg 300  Q
      ||||| ||| |||||| ||||||||||||||||||    
T  128364 acaaatt-ttgcataatgcattaaaatattaccattg 128399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 79; Significance: 8e-37; HSPs: 12)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 1772542 - 1772684
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||| ||||||||| ||| |||||| ||||||||| ||||||  |||| | ||||||| |||||||||||||||||||||| |||||| |    
T  1772542 atgtcatgttattttgtttgataattatcatgatataagaacttttattgatacttaaaggagcaaccgaattattcggtaaggaaatgttgaaatgaac 1772641  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||| |||| |||||||||||||||||||    
T  1772642 gcaaattgttggataatgcattacaatattaccattgaagctt 1772684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 299
Target Start/End: Complemental strand, 23330109 - 23329974
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||||||||| |||||||||| | | |||||| ||||||||| |||||| |||||   |||||| ||||||||||||||||||||||||||||||||    
T  23330109 atgtcatgttattcggtttgataattgtcatgatataagaacttttattgatagttaaacgagcaactaaattattcggtaaggaaatgttaaaatgagc 23330010  T
Q  264 gtaaattcttggataatgaattaaaatattaccatt 299  Q
    | ||||| |||||||||| |||| || |||||||||    
T  23330009 gcaaattattggataatgcattacaacattaccatt 23329974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 2487736 - 2487598
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | | |||||| |||||||||||  ||| ||||| | ||||||| ||||||||| |||  |||| |||||||||||| ||    
T  2487736 catgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcgataacaaaattttaaaatgagcgcaa 2487637  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| || ||||||| |||| || ||||||||||||||||    
T  2487636 attgttagataatgcattacaacattaccattgaagctt 2487598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 164 - 303
Target Start/End: Original strand, 40796280 - 40796419
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||| |||||||||||||||||| | | |||||| |||||||||||  ||| ||||| | ||||||| ||||||||| |||  ||||| ||||||||||    
T  40796280 atgtcctgttatttggtttgataattgtcatgatataagaactttcacggatagttaaaggagcaaccgaattattcgataacaaaatgctaaaatgagc 40796379  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaag 303  Q
    | ||||| |||||||||| |||| || |||| ||||||||    
T  40796380 gcaaattgttggataatgcattacaacattatcattgaag 40796419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4557323 - 4557283
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||||||||||||| |||| ||||||||||||    
T  4557323 cggggaaaacccaaacccatacccaaacccagtcaaaacgg 4557283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4016062 - 4016022
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||||||||||||| ||||  |||||||||||    
T  4016062 cggggaaaacccaaacccatacccaaacctagtcaaaacgg 4016022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 6738423 - 6738383
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  6738423 cggggaaaacccatacccatacccaaacccagtcaaaacgg 6738383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 23154083 - 23154043
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| ||||||||| |||||||    
T  23154083 cggggaaaacccatacccatacccaaactcagttaaaacgg 23154043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30616299 - 30616259
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||||||||||||  ||| |||||||||||||    
T  30616299 cggggaaaacccaaacccatactcaaattcagtcaaaacgg 30616259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 44252817 - 44252857
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  44252817 cggggaaaacccatacccatacccaaacccagtcaaaacgg 44252857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 48390835 - 48390795
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  48390835 cggggaaaacccatacccatacccaaacccagtcaaaacgg 48390795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 49580134 - 49580174
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  49580134 cggggaaaacccatacccatacccaaacccagtcaaaacgg 49580174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 78; Significance: 3e-36; HSPs: 16)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 305
Target Start/End: Complemental strand, 20634126 - 20633985
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||| | | |||||||||||||||||||| ||||||| ||||||||    
T  20634126 atgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaacaaccaaattattcggtaagtaaatgtttaaatgagc 20634027  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagct 305  Q
    | ||||| |||||||||| |||| || ||||||||| |||||    
T  20634026 gcaaattgttggataatgcattacaacattaccattaaagct 20633985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 164 - 305
Target Start/End: Complemental strand, 20650240 - 20650099
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||| | | |||||||||||||||||||| ||||||| ||||||||    
T  20650240 atgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaacaaccaaattattcggtaagtaaatgtttaaatgagc 20650141  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagct 305  Q
    | ||||| |||||||||| |||| || ||||||||| |||||    
T  20650140 gcaaattgttggataatgcattacaacattaccattaaagct 20650099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 76; E-Value: 5e-35
Query Start/End: Original strand, 164 - 306
Target Start/End: Complemental strand, 12915418 - 12915278
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||| | | | |||||| |||||||||||||||||||||| | ||||||| ||||||||||||||  ||||||||||||| |    
T  12915418 atgtcatgttatttggtttgatgattgtcatgatataagaactttcattgatggttaaaggagcaaccgaattattcggtaag--aatgttaaaatgaac 12915321  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
    | ||||| |||||||||| |||| ||||||||| |||||||||    
T  12915320 gcaaattattggataatgcattacaatattacctttgaagctt 12915278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 164 - 303
Target Start/End: Complemental strand, 2681162 - 2681023
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||| | |||||||||||||||| ||||| | | ||||||| ||||||| |||||||||||||||||||||    
T  2681162 atgtcatgttatttggtttgataattgtcatgaaataagaactttcattgatagttaaaggatcaaccaagttattcgataaggaaatgttaaaatgagc 2681063  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaag 303  Q
      ||||| |||||||||| |||| || |||||||||||||    
T  2681062 tcaaattattggataatgcattacaacattaccattgaag 2681023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 10834156 - 10834018
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||||||| |||||| | |||| ||||||||||||||| | | ||||  ||||||||||||| |||| ||||||||||||    
T  10834156 atgtcatgttatttggtttgataactatcatgataaatgaacattcattgatggttaaaggaacaactgaattattcggtaaagaaacgttaaaatgagc 10834057  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaa 302  Q
    | ||||| |||||||||  ||||  | ||||||||||||    
T  10834056 gcaaatttttggataattcattaccacattaccattgaa 10834018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 172 - 306
Target Start/End: Complemental strand, 12250909 - 12250776
Alignment:
Q  172 ttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattc 271  Q
    |||||||||||||||| | | |||||| |||||||||||||||| ||||| | || || | |||||||  ||||| ||||||||||||||||| |||||     
T  12250909 ttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggagtaaacgaattatttagtaag-aaatgttaaaatgagcgcaaattg 12250811  T
Q  272 ttggataatgaattaaaatattaccattgaagctt 306  Q
    |||||||||| |||| |||||||||||||||||||    
T  12250810 ttggataatgcattacaatattaccattgaagctt 12250776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 12712684 - 12712790
Alignment:
Q  200 aagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatattaccatt 299  Q
    |||||||||||||||| ||||  | ||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||| |||| ||||||||||||    
T  12712684 aagaactttcattgatagttagaggagcaaccgaattattcggtaagaaaatgttaaaatgaacgcaaattgttggataatgcattacaatattaccatt 12712783  T
Q  300 gaagctt 306  Q
    |||||||    
T  12712784 gaagctt 12712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 164 - 306
Target Start/End: Original strand, 23045134 - 23045276
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    ||||||| |||||||||||||||| | | |||||| |||||||||| ||||| ||||| | ||||||| |||||||| |||| ||||||||||||||| |    
T  23045134 atgtcatcttatttggtttgataattgtcatgatataagaactttcgttgatagttaaagcagcaaccgaattattcagtaaagaaatgttaaaatgaac 23045233  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaagctt 306  Q
      ||||| || ||||||| |||| |||||||| ||||||||||    
T  23045234 acaaattgttcgataatgcattacaatattactattgaagctt 23045276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 200 - 306
Target Start/End: Original strand, 12773948 - 12774054
Alignment:
Q  200 aagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatattaccatt 299  Q
    ||||| |||||||||| ||||  | ||||||| |||||||||||||| |||||||||||||| || ||||| |||||||||| |||| ||||||||||||    
T  12773948 aagaattttcattgatagttagaggagcaaccgaattattcggtaagaaaatgttaaaatgaacgcaaattgttggataatgcattacaatattaccatt 12774047  T
Q  300 gaagctt 306  Q
    |||||||    
T  12774048 gaagctt 12774054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 43523702 - 43523564
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||| ||||||| | | |||||| |||||||||||||||| ||||| | ||||| | ||||||||| |||| |||||||||||| |||| ||    
T  43523702 catgttatttggattgataattttcatgatataagaactttcattgatagttaaaggagcaatcgaattattcgataagaaaatgttaaaattagcgcaa 43523603  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||  |||| || |||| |||||||||||    
T  43523602 attgttggataatccattacaaaattatcattgaagctt 43523564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 164 - 302
Target Start/End: Complemental strand, 34259206 - 34259076
Alignment:
Q  164 atgtcatgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagc 263  Q
    |||||||||||||||||||||||| | | |||||| |||||||||||||||| ||||| | | ||||| |||| ||| |||||||        ||||| |    
T  34259206 atgtcatgttatttggtttgataattgtcatgatataagaactttcattgatagttaaaggaacaaccgaatttttcagtaagga--------aatgaac 34259115  T
Q  264 gtaaattcttggataatgaattaaaatattaccattgaa 302  Q
    ||||||| |||||||||| |||| |||||||||||||||    
T  34259114 gtaaattgttggataatgcattacaatattaccattgaa 34259076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 176 - 306
Target Start/End: Original strand, 18116660 - 18116790
Alignment:
Q  176 ttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttgg 275  Q
    |||| ||||||| | | |||||| ||||||||| |||||| ||||| | ||||| | ||||||||| | || |||||||||||| |||| ||||| ||||    
T  18116660 ttggattgataattctcatgatataagaacttttattgatagttaaaggagcaatcgaattattcgattagaaaatgttaaaattagcgcaaattgttgg 18116759  T
Q  276 ataatgaattaaaatattaccattgaagctt 306  Q
    |||||  |||| || |||| |||||||||||    
T  18116760 ataatccattacaaaattatcattgaagctt 18116790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10127144 - 10127184
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  10127144 cggggaaaacccatacccatacccaaacccagtcaaaacgg 10127184  T

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Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 23045010 - 23044974
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaa 37  Q
    ||||||||||| ||||||||||| |||||||||||||    
T  23045010 cggggaaaacctaaacccatacccaaactcagtcaaa 23044974  T

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Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 40517876 - 40517916
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaaacgg 41  Q
    ||||||||||||| ||||||||| |||| ||||||||||||    
T  40517876 cggggaaaacccatacccatacccaaacccagtcaaaacgg 40517916  T

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Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43523818 - 43523854
Alignment:
Q  1 cggggaaaacccaaacccataccaaaactcagtcaaa 37  Q
    |||||||||||||||| |||||| |||||||||||||    
T  43523818 cggggaaaacccaaactcatacccaaactcagtcaaa 43523854  T

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Target: scaffold0015 (Bit Score: 75; Significance: 2e-34; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 168 - 306
Target Start/End: Original strand, 56044 - 56182
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| | |  ||||| || ||||||||||||| | ||| |||||||||||||||||||||||||||||||||||||||  | ||    
T  56044 catgttatttggtttgataattgtcctgatataaaaactttcattgataggtaaagaagcaaccaaattattcggtaaggaaatgttaaaatgaatgcaa 56143  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| ||||||| |||||||||||    
T  56144 attgttggataatgcattataatattaacattgaagctt 56182  T

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Target: scaffold0184 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 2910 - 2772
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    ||||||||||| |||||||| | | |||||  || ||||||||||||| |||||  |||||||||||||||| ||||| |||||| ||||||||| | ||    
T  2910 catgttatttgatttgataattgtcatgatttaataactttcattgatagttaaaaaagcaaccaaattatttggtaatgaaatgctaaaatgagggaaa 2811  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| |||||||||| |||| |||||||||||| ||||||    
T  2810 attgttggataatgcattacaatattaccattaaagctt 2772  T

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Target: scaffold0182 (Bit Score: 47; Significance: 9e-18; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 168 - 306
Target Start/End: Complemental strand, 16909 - 16771
Alignment:
Q  168 catgttatttggtttgataactattatgatacaagaactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaa 267  Q
    |||||||||||||||||||| ||| |||||| |||||||||||||||| |||||   | ||||| ||||||| | |||  |||||||||||||| |  ||    
T  16909 catgttatttggtttgataattatcatgatataagaactttcattgatagttaaaagaccaaccgaattatttgataaaaaaatgttaaaatgaacacaa 16810  T
Q  268 attcttggataatgaattaaaatattaccattgaagctt 306  Q
    ||| ||||| |||| |||| || |||  |||||||||||    
T  16809 attgttggacaatgcattacaacattgtcattgaagctt 16771  T

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Target: scaffold0005 (Bit Score: 44; Significance: 6e-16; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 203 - 306
Target Start/End: Complemental strand, 211287 - 211184
Alignment:
Q  203 aactttcattgatggttaacgaagcaaccaaattattcggtaaggaaatgttaaaatgagcgtaaattcttggataatgaattaaaatattaccattgaa 302  Q
    ||||||||| ||| ||||| | ||||||| |||||||||||||| ||||| |||||| |||| ||||| |||||||||  |||| || ||||| ||||||    
T  211287 aactttcatcgatagttaaaggagcaaccgaattattcggtaagaaaatgataaaatcagcgcaaattgttggataatccattacaacattacaattgaa 211188  T
Q  303 gctt 306  Q
    ||||    
T  211187 gctt 211184  T

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Target: scaffold0005; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 5 - 37
Target Start/End: Original strand, 211438 - 211470
Alignment:
Q  5 gaaaacccaaacccataccaaaactcagtcaaa 37  Q
    ||||||||||||||||||| |||||||||||||    
T  211438 gaaaacccaaacccatacccaaactcagtcaaa 211470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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