View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20816_high_115 (Length: 204)
Name: NF20816_high_115
Description: NF20816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20816_high_115 |
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Alignment Details
Target: chr7 (Bit Score: 155; Significance: 2e-82; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 15 - 189
Target Start/End: Original strand, 2875884 - 2876058
Alignment:
| Q |
15 |
gatgaactaataaggttgaggaaagacatggagacggctcatgaaccatgatcaaggtatctgtaaaattaactccaaattttgctagaatacaagtatt |
114 |
Q |
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| T |
2875884 |
gatgaactactaaggttgaggaaagacatggaggcggctcatgaaccatgatcaaggtatccgtaaaattagctccaaattttgctagaatacaagtatt |
2875983 |
T |
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| Q |
115 |
acccacccaaaagcgttgttgagggtaaaattataatcattctttatgaaatctctaatagtctccaacatatat |
189 |
Q |
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|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2875984 |
acccacccaaaagcgtggttgagggtaaaattataatcattctttatgaaatctctaatagtctccaacatatat |
2876058 |
T |
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