View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20816_low_7 (Length: 745)

Name: NF20816_low_7
Description: NF20816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20816_low_7
NF20816_low_7
[»] chr1 (39 HSPs)
chr1 (252-727)||(6705747-6706222)
chr1 (252-385)||(13509948-13510081)
chr1 (252-414)||(47655896-47656060)
chr1 (82-171)||(47655722-47655812)
chr1 (267-414)||(50030763-50030912)
chr1 (252-389)||(46406374-46406511)
chr1 (82-174)||(6706300-6706393)
chr1 (252-414)||(35604740-35604904)
chr1 (82-171)||(13509775-13509865)
chr1 (82-171)||(50031002-50031093)
chr1 (82-164)||(4485019-4485102)
chr1 (82-164)||(44740325-44740408)
chr1 (252-337)||(7385230-7385315)
chr1 (91-166)||(41512322-41512398)
chr1 (99-164)||(27416744-27416809)
chr1 (114-166)||(24075700-24075752)
chr1 (82-166)||(42137536-42137621)
chr1 (252-342)||(27575973-27576063)
chr1 (106-164)||(46033537-46033595)
chr1 (91-164)||(49430812-49430886)
chr1 (82-166)||(1762396-1762479)
chr1 (98-166)||(11829252-11829320)
chr1 (92-166)||(45179509-45179583)
chr1 (131-171)||(7385389-7385429)
chr1 (94-166)||(27067313-27067385)
chr1 (82-164)||(11050935-11051018)
chr1 (252-342)||(51488533-51488623)
chr1 (252-313)||(7593241-7593302)
chr1 (252-313)||(15353335-15353396)
chr1 (252-313)||(26821489-26821550)
chr1 (252-313)||(27000304-27000365)
chr1 (252-313)||(36496089-36496150)
chr1 (252-313)||(38627645-38627706)
chr1 (252-313)||(38843258-38843319)
chr1 (252-313)||(50979273-50979334)
chr1 (296-330)||(11829089-11829123)
chr1 (252-313)||(5271541-5271602)
chr1 (105-166)||(20473663-20473724)
chr1 (105-166)||(20557829-20557890)
[»] chr2 (24 HSPs)
chr2 (252-416)||(17480738-17480904)
chr2 (252-386)||(35458193-35458327)
chr2 (252-389)||(43342285-43342421)
chr2 (82-171)||(43342111-43342201)
chr2 (252-389)||(13892705-13892842)
chr2 (252-389)||(14032830-14032967)
chr2 (252-414)||(37640769-37640933)
chr2 (252-386)||(14033328-14033462)
chr2 (274-389)||(7473471-7473586)
chr2 (99-171)||(35458036-35458109)
chr2 (91-166)||(44002825-44002901)
chr2 (82-164)||(37640596-37640679)
chr2 (82-164)||(7473698-7473781)
chr2 (93-164)||(32497056-32497128)
chr2 (252-330)||(2443703-2443781)
chr2 (82-166)||(12015691-12015775)
chr2 (115-171)||(37996891-37996946)
chr2 (252-313)||(14379767-14379828)
chr2 (252-313)||(31686825-31686886)
chr2 (252-313)||(31786806-31786867)
chr2 (252-313)||(40254451-40254512)
chr2 (252-313)||(44282601-44282662)
chr2 (274-322)||(3739078-3739126)
chr2 (82-127)||(17481005-17481051)
[»] chr8 (22 HSPs)
chr8 (252-414)||(22936578-22936742)
chr8 (252-414)||(45276411-45276575)
chr8 (252-414)||(8416588-8416752)
chr8 (82-171)||(22936405-22936494)
chr8 (252-389)||(35802352-35802489)
chr8 (87-171)||(45276243-45276327)
chr8 (82-171)||(8416836-8416926)
chr8 (304-389)||(44238804-44238889)
chr8 (91-166)||(2025691-2025767)
chr8 (274-382)||(33165751-33165859)
chr8 (82-160)||(35164216-35164295)
chr8 (82-164)||(35802179-35802262)
chr8 (270-382)||(36821653-36821764)
chr8 (91-166)||(3590249-3590323)
chr8 (94-166)||(13015857-13015929)
chr8 (91-164)||(36821470-36821545)
chr8 (112-166)||(33165970-33166024)
chr8 (252-313)||(30210501-30210562)
chr8 (252-313)||(30984339-30984400)
chr8 (252-313)||(34774385-34774446)
chr8 (252-316)||(35164389-35164453)
chr8 (91-166)||(7637408-7637482)
[»] chr6 (11 HSPs)
chr6 (256-385)||(365548-365677)
chr6 (252-389)||(21517365-21517502)
chr6 (252-386)||(10683125-10683257)
chr6 (82-174)||(10683325-10683418)
chr6 (94-166)||(27825177-27825250)
chr6 (97-166)||(20838345-20838415)
chr6 (252-342)||(31746197-31746287)
chr6 (91-152)||(4146992-4147053)
chr6 (91-166)||(30134321-30134396)
chr6 (141-171)||(365771-365801)
chr6 (252-313)||(30018880-30018941)
[»] chr3 (36 HSPs)
chr3 (252-414)||(48254512-48254676)
chr3 (252-414)||(39251402-39251566)
chr3 (252-389)||(31813354-31813491)
chr3 (82-169)||(39251652-39251740)
chr3 (270-414)||(45150524-45150670)
chr3 (82-171)||(48254338-48254428)
chr3 (91-166)||(30810886-30810962)
chr3 (91-164)||(28182550-28182624)
chr3 (96-166)||(50392669-50392740)
chr3 (82-164)||(11263871-11263954)
chr3 (82-164)||(45150778-45150861)
chr3 (82-164)||(42274697-42274780)
chr3 (252-322)||(11263711-11263781)
chr3 (82-164)||(48181249-48181333)
chr3 (270-342)||(33025824-33025896)
chr3 (252-360)||(42074374-42074482)
chr3 (270-330)||(42274530-42274590)
chr3 (82-164)||(51229907-51229990)
chr3 (91-168)||(45488952-45489030)
chr3 (83-164)||(53687213-53687295)
chr3 (94-166)||(28883868-28883940)
chr3 (252-324)||(48181087-48181159)
chr3 (274-360)||(28182352-28182438)
chr3 (252-382)||(51229688-51229817)
chr3 (252-342)||(52692005-52692095)
chr3 (94-166)||(44328830-44328903)
chr3 (296-361)||(51407445-51407510)
chr3 (112-164)||(51407644-51407696)
chr3 (96-166)||(44610676-44610745)
chr3 (252-342)||(53687385-53687475)
chr3 (320-389)||(11257778-11257847)
chr3 (91-164)||(42074572-42074642)
chr3 (252-313)||(47697106-47697167)
chr3 (252-313)||(51129052-51129113)
chr3 (252-313)||(1527638-1527699)
chr3 (252-313)||(47141439-47141500)
[»] chr7 (26 HSPs)
chr7 (252-414)||(25472773-25472937)
chr7 (252-389)||(30139837-30139974)
chr7 (252-389)||(12909182-12909319)
chr7 (252-383)||(37371038-37371169)
chr7 (87-171)||(25472604-25472689)
chr7 (82-171)||(30139663-30139753)
chr7 (83-164)||(43664652-43664733)
chr7 (270-382)||(25970393-25970505)
chr7 (82-164)||(26826552-26826635)
chr7 (82-164)||(15000048-15000131)
chr7 (91-161)||(47158067-47158137)
chr7 (83-166)||(298496-298579)
chr7 (83-166)||(2000007-2000089)
chr7 (82-164)||(26827602-26827681)
chr7 (252-322)||(41064629-41064699)
chr7 (274-360)||(14999850-14999936)
chr7 (280-361)||(43664850-43664931)
chr7 (274-382)||(26826342-26826450)
chr7 (98-166)||(32450929-32450996)
chr7 (82-166)||(47085523-47085607)
chr7 (82-164)||(25970613-25970696)
chr7 (82-164)||(30825370-30825452)
chr7 (270-360)||(30825172-30825262)
chr7 (252-313)||(25341482-25341543)
chr7 (252-313)||(31012440-31012501)
chr7 (98-166)||(25191713-25191781)
[»] chr5 (31 HSPs)
chr5 (252-414)||(31905356-31905520)
chr5 (252-388)||(41742230-41742366)
chr5 (252-389)||(37066567-37066704)
chr5 (252-389)||(27739359-27739496)
chr5 (82-171)||(41742056-41742146)
chr5 (252-416)||(19356424-19356591)
chr5 (252-389)||(21022640-21022777)
chr5 (252-389)||(39236904-39237041)
chr5 (252-389)||(41040144-41040281)
chr5 (252-412)||(7073283-7073445)
chr5 (93-171)||(31905604-31905683)
chr5 (252-386)||(33229160-33229294)
chr5 (270-388)||(21022036-21022154)
chr5 (91-166)||(10900310-10900385)
chr5 (91-164)||(11018273-11018347)
chr5 (94-166)||(40979597-40979669)
chr5 (113-161)||(53534-53582)
chr5 (270-389)||(53693-53811)
chr5 (91-166)||(33387544-33387619)
chr5 (82-164)||(41039971-41040054)
chr5 (91-164)||(8958347-8958421)
chr5 (274-382)||(8958533-8958640)
chr5 (99-166)||(25256667-25256734)
chr5 (99-166)||(25320458-25320525)
chr5 (280-360)||(11018465-11018545)
chr5 (252-342)||(3260876-3260966)
chr5 (252-342)||(14082891-14082981)
chr5 (252-342)||(42663434-42663524)
chr5 (91-152)||(2526466-2526527)
chr5 (252-313)||(29542479-29542540)
chr5 (252-313)||(33115063-33115124)
[»] chr4 (35 HSPs)
chr4 (252-414)||(28963876-28964040)
chr4 (252-389)||(22606368-22606505)
chr4 (252-389)||(30418405-30418543)
chr4 (252-385)||(52058260-52058393)
chr4 (85-171)||(30418231-30418318)
chr4 (82-171)||(28963703-28963793)
chr4 (273-369)||(38767764-38767860)
chr4 (82-166)||(50523706-50523791)
chr4 (82-164)||(53663470-53663553)
chr4 (252-416)||(29386044-29386205)
chr4 (83-163)||(8510339-8510419)
chr4 (87-158)||(29385884-29385956)
chr4 (277-385)||(48406933-48407041)
chr4 (91-164)||(22606204-22606278)
chr4 (252-342)||(51834256-51834346)
chr4 (270-371)||(53404137-53404238)
chr4 (91-166)||(39732988-39733064)
chr4 (274-330)||(53663665-53663721)
chr4 (91-166)||(16202942-16203017)
chr4 (91-164)||(45105986-45106060)
chr4 (270-382)||(49723744-49723855)
chr4 (82-164)||(48407132-48407215)
chr4 (82-164)||(49723960-49724043)
chr4 (82-164)||(38767971-38768054)
chr4 (91-166)||(51677276-51677351)
chr4 (82-164)||(53403951-53404029)
chr4 (91-139)||(5937737-5937786)
chr4 (252-313)||(18140481-18140542)
chr4 (252-313)||(24038099-24038160)
chr4 (252-313)||(24246647-24246708)
chr4 (252-313)||(31431073-31431134)
chr4 (252-313)||(49127694-49127755)
chr4 (113-161)||(26457294-26457342)
chr4 (98-166)||(28911757-28911825)
chr4 (252-313)||(39382995-39383056)
[»] scaffold0808 (2 HSPs)
scaffold0808 (252-410)||(4021-4180)
scaffold0808 (82-174)||(4258-4351)
[»] scaffold0068 (2 HSPs)
scaffold0068 (252-414)||(37623-37785)
scaffold0068 (82-171)||(37869-37959)
[»] scaffold0069 (2 HSPs)
scaffold0069 (82-164)||(16991-17074)
scaffold0069 (274-360)||(16797-16883)
[»] scaffold0097 (2 HSPs)
scaffold0097 (82-164)||(32897-32980)
scaffold0097 (252-384)||(33070-33202)
[»] scaffold0006 (2 HSPs)
scaffold0006 (82-164)||(91716-91799)
scaffold0006 (274-330)||(91546-91604)


Alignment Details
Target: chr1 (Bit Score: 403; Significance: 0; HSPs: 39)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 403; E-Value: 0
Query Start/End: Original strand, 252 - 727
Target Start/End: Complemental strand, 6706222 - 6705747
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  6706222 tgattctagaaaagctagaagctaggatttgtagctttaaggataattgtttttggaggatagaatcaattcttaaaagccaaactaaacaccattaaaa 6706123  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttcggcgctgaaaagtcaaaccaaacagacacgtaacattgtgtgttgtgtatgaagggggttga 451  Q
    |||||||||||||||||||||||||||||||| |||||||  |||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||    
T  6706122 attcaatttttcacttttaaagattgtagaattacttcggtactgaaaagccaaaccaaacagacacgtaacattgtgtgttgtgtatgaagggggtgga 6706023  T
Q  452 tggtatctatgagtttcatgttatcatagttgaaattagaagtattttaaattcaacttacaattttgaagttaagtttattcgaccataaacgaatata 551  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6706022 tggtatctatgaatttcatgttatcatagttgaaattagaagtattttaaattcaacttacaattttgaagttaagtttattcgaccataaacgaatata 6705923  T
Q  552 gttgttcataatattatgttcctttttgtatgcaacattaattnnnnnnntgagtagctaaactatagtaattttattacccaaatttaaattcaaaagt 651  Q
    ||||||||||||||||||||||||||||||| |||||||||||       |||||||||||||||||||||||||||||||||||||||| |||||||||    
T  6705922 gttgttcataatattatgttcctttttgtatccaacattaattaaaaaaatgagtagctaaactatagtaattttattacccaaatttaacttcaaaagt 6705823  T
Q  652 gttgttacttgctaatagttagagcatagaccctacctcccactttgtctgtagttataatttcgaagtgattatg 727  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6705822 gttgttacttgctaatagttagagcatagaccctacctcccactttgtctgtagttataatttcgaagtgattatg 6705747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 252 - 385
Target Start/End: Original strand, 13509948 - 13510081
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||| ||||||    
T  13509948 tgattctagaaaagctagaagctaggatttatagctttaaggataattgcttttggaggatagaatcaattcttaaaagctaaaccaaacaccattaaaa 13510047  T
Q  352 attcaatttttcacttttaaagattgtagaatca 385  Q
    | ||| |||||||||||| ||| |||||||||||    
T  13510048 actcagtttttcacttttgaaggttgtagaatca 13510081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 47655896 - 47656060
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||| ||||| | ||||||    
T  47655896 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaacatcattaaaa 47655995  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    | ||| ||  |||||||| | | ||||| |||||||||  || | ||||||| ||||||||||||    
T  47655996 actcagttagtcacttttgagggttgtataatcacttcttggtgttgaaaagccaaaccaaacag 47656060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 47655722 - 47655812
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47655722 tttggtaagtcatgaccataaatatttttcgggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 47655812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 79; E-Value: 2e-36
Query Start/End: Original strand, 267 - 414
Target Start/End: Complemental strand, 50030912 - 50030763
Alignment:
Q  267 tagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcact 366  Q
    |||||| |||||||| ||||||||| |||||||| ||||||||||||||||||||||||||||   |||| ||||||| || |||||||| |||||||||    
T  50030912 tagaagttaggatttatagctttaaagataattgtttttggaggatagaatcaattcttaaaacccaaaccaaacaccattgaaaattcagtttttcact 50030813  T
Q  367 tttaaagattgtagaatcac--ttcggcgctgaaaagtcaaaccaaacag 414  Q
    ||||||||||||| ||||||  || || ||||||||| ||||||||||||    
T  50030812 tttaaagattgtataatcactttttggtgctgaaaagccaaaccaaacag 50030763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 46406511 - 46406374
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | |||||| |||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||| ||||||| || |||    
T  46406511 tgattctacaaaagccaaaagctaagatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaacaccattgaaa 46406412  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||| ||||||||||| ||| |||||||||||||||    
T  46406411 attcaacttttcacttttgaaggttgtagaatcacttc 46406374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 6706393 - 6706300
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaattc 174  Q
    |||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  6706393 tttggtaagtcatgaccataaacatttttcggaggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattataattc 6706300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 35604904 - 35604740
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||| | ||||||  ||||||||||| ||||||||||| ||||||||||||||| |||||||||||||| |||  ||||||| || |||    
T  35604904 tgattctacaaaagtcaaaagctaatatttgtagcttcaaggataattgtttttggaggatagaagcaattcttaaaagtcaaatcaaacaccattgaaa 35604805  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    | ||| |||||||||||| | | |||||||||||||||  || |||||||||| ||| |||||||    
T  35604804 actcagtttttcacttttgagggttgtagaatcacttcttggtgctgaaaagttaaaacaaacag 35604740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 13509775 - 13509865
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||||| |||||| ||||||||||||||||||||| |||||||||||    
T  13509775 tttggtaagtcatgaccataaacatttttcgggggctaatttggttcgttcagttttgtaattaaatttggttcatcaagttaaattacaa 13509865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 50031093 - 50031002
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggg--gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| ||||||||||||||||| ||||||  ||  |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  50031093 tttggtaagtcatgaccataaacatttttttggacgctaatttggttcgttaagttttctaattaaatttgattcatcaaattaaattacaa 50031002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 4485019 - 4485102
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||||||||||||||| |||||| | ||||||||||||||||||||||||||||||||||||||||    
T  4485019 tttggtaaatcatgaccataaatatttttcgggggctaattagtttcgttaagttttctaattaaatttggttcatcaaattaa 4485102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 44740408 - 44740325
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| ||||    
T  44740408 tttggtaactcatgacaataaatatttttcggaggctaatttggttcgttaagttttctgattaaatttggttcatcaagttaa 44740325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 252 - 337
Target Start/End: Complemental strand, 7385315 - 7385230
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaact 337  Q
    ||||||||| |||| |||||  |||||||||||||||||| |||||||||||||| |||||||||| ||||||||||||| |||||    
T  7385315 tgattctaggaaagctagaaattaggatttgtagctttaaagataattgcttttgaaggatagaattaattcttaaaagtcaaact 7385230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 41512398 - 41512322
Alignment:
Q  91 tcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||| ||||||||||||| | |||||||||||||||||||||||||||| |||||||||||||||||||| |||||    
T  41512398 tcatggccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcatcaaactaaat 41512322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 99 - 164
Target Start/End: Complemental strand, 27416809 - 27416744
Alignment:
Q  99 ataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||| |||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  27416809 ataaacatttttcgaggctaatttggttcgttaaattttctgattaaatttggttcatcaaattaa 27416744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 114 - 166
Target Start/End: Complemental strand, 24075752 - 24075700
Alignment:
Q  114 ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  24075752 ggctaatttggttcgttaagttttctgattaaatttggttcatcaaattaaat 24075700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 42137536 - 42137621
Alignment:
Q  82 tttgataagtcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||| ||| ||||||||||||||||||| | |||| ||| ||||||||||||||||||| ||||||||||||| |||| |||||||    
T  42137536 tttggtaactcatgaccataaatattttatgggggttaagttggttcgttaagttttctgattaaatttggtttatcagattaaat 42137621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 27576063 - 27575973
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||||||||| ||||||||  | ||||| ||||| ||| ||||||||||||||||||||| ||||| | |||||| |||| |||||    
T  27576063 tgattctagaaaagtcagaagctaaaaattgtaactttatggagaattgcttttggaggatagaagcaattatgaaaagtcaaaccaaaca 27575973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 106 - 164
Target Start/End: Original strand, 46033537 - 46033595
Alignment:
Q  106 tttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||| ||||||||||||||| ||| |||||||| ||||||||||||||||||||||||    
T  46033537 tttttgggggctaatttggtttgttgagttttctgattaaatttggttcatcaaattaa 46033595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 49430886 - 49430812
Alignment:
Q  91 tcatgaccataaatatttttcggg-gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||||||||||||||||||||| | |||  |||||||||||||||||| | |||||||||||||||| |||||||    
T  49430886 tcatgaccataaatatttttcgagagctggtttggttcgttaagttttttgattaaatttggttcattaaattaa 49430812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 166
Target Start/End: Complemental strand, 1762479 - 1762396
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||| ||| |||||||| |||||||||| || ||||||||||||||||||| |||| | ||  ||||||||||||||||||||||    
T  1762479 tttggtaactcatgacc-taaatattttccgaggctaatttggttcgttaaattttttgatacaatttggttcatcaaattaaat 1762396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 11829320 - 11829252
Alignment:
Q  98 cataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||  |||| |||||||||||||||| |||| | |||||||||||||| |||||||||||    
T  11829320 cataaatattttatggggttaatttggttcgttaaattttttgattaaatttggttcctcaaattaaat 11829252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 92 - 166
Target Start/End: Complemental strand, 45179583 - 45179509
Alignment:
Q  92 catgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||||   |||||||||||||||||  | |||| | |||||||||| |||||||||||||||    
T  45179583 catgaccataaatattttgtagggctaatttggttcgtagatttttttgattaaatttgattcatcaaattaaat 45179509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 131 - 171
Target Start/End: Complemental strand, 7385429 - 7385389
Alignment:
Q  131 aagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||||||||||||||||||| ||||||||||||||||||||    
T  7385429 aagttttctaattaaatttgattcatcaaattaaattacaa 7385389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 27067385 - 27067313
Alignment:
Q  94 tgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||| |||  ||  ||||||| |||||||| |||| | ||||||||||||||||||||||||||    
T  27067385 tgaccataaatatcttttaggtttaatttgattcgttaattttttttattaaatttggttcatcaaattaaat 27067313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 11050935 - 11051018
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcg-gggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| |||| ||||||||||||||||| ||||||||||| | | |||| |||| | | ||||||||||||||||||||||    
T  11050935 tttggtaactcattaccataaatatttttcgagggctaatttgatccattaatttttttgaataaatttggttcatcaaattaa 11051018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 51488533 - 51488623
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | |||||||||||||||||| || | ||| | |||||| |||| |||||    
T  51488533 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagtcaaaccaaaca 51488623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 7593241 - 7593302
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  7593241 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 7593302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 15353396 - 15353335
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  15353396 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 15353335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 26821550 - 26821489
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  26821550 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 26821489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 27000304 - 27000365
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  27000304 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 27000365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 36496089 - 36496150
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  36496089 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 36496150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 38627706 - 38627645
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  38627706 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 38627645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 38843319 - 38843258
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  38843319 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 38843258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 50979273 - 50979334
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  50979273 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 50979334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 296 - 330
Target Start/End: Complemental strand, 11829123 - 11829089
Alignment:
Q  296 aattgcttttggaggatagaatcaattcttaaaag 330  Q
    ||||||||||||||||||||| |||||||||||||    
T  11829123 aattgcttttggaggatagaagcaattcttaaaag 11829089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 5271541 - 5271602
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||| ||||| ||||||||| ||  | ||||||||||||||||||    
T  5271541 tgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgcttttggaggata 5271602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 166
Target Start/End: Original strand, 20473663 - 20473724
Alignment:
Q  105 atttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||| |||||||||||||||| | ||  ||| | || |||||||||||||||||||||||    
T  20473663 attttttggggctaatttggttcatcaaaatttttgatcaaatttggttcatcaaattaaat 20473724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 20557890 - 20557829
Alignment:
Q  105 atttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||| |||||||||||||||| | ||  ||| | || |||||||||||||||||||||||    
T  20557890 attttttggggctaatttggttcatcaaaatttttgatcaaatttggttcatcaaattaaat 20557829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 104; Significance: 2e-51; HSPs: 24)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 252 - 416
Target Start/End: Complemental strand, 17480904 - 17480738
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| ||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||  |||||||||||| ||||||    
T  17480904 tgattctagaaaagctagaagctaggatttgtagctttaaagataattgcttttgaaggatagaatcaattcttaaaagccaaactaaacaccattaaaa 17480805  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacagac 416  Q
    | ||| |||||||||||| ||| |||||||||||||||  || | ||||||| ||||||||||||||    
T  17480804 actcagtttttcacttttgaaggttgtagaatcacttcttggtgttgaaaagccaaaccaaacagac 17480738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 95; E-Value: 4e-46
Query Start/End: Original strand, 252 - 386
Target Start/End: Original strand, 35458193 - 35458327
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||| |||||||||||| |||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||    
T  35458193 tgattctagaaaagctagaagttaggatttgtagttttaaggataattgcttttggatgatagaatcaattcttaaaagtcaaaccaaacaccattaaaa 35458292  T
Q  352 attcaatttttcacttttaaagattgtagaatcac 386  Q
    | |||||||||||||||| ||| ||||||||||||    
T  35458293 actcaatttttcacttttgaaggttgtagaatcac 35458327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 43342285 - 43342421
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||   |||  |||||||  |||||    
T  43342285 tgattctagaaaagctagaagctagaatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaaaccaaatcaaacacc-ataaaa 43342383  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    | ||| | |||||||||| ||| |||||||||||||||    
T  43342384 actcattgtttcacttttgaaggttgtagaatcacttc 43342421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 43342111 - 43342201
Alignment:
Q  82 tttgataagtcatgaccataaatatttttc-ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  43342111 tttggtaagtcatgaccataaatatttttcaggggctaatttggtttgttaagttttctaattaaatttggttcatcaaattaaattacaa 43342201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 13892842 - 13892705
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||  ||||||| || |||    
T  13892842 tgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaatcaaacaccattgaaa 13892743  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||  ||||||||||| | |||||||||||||||||    
T  13892742 attcagcttttcacttttgaggattgtagaatcacttc 13892705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 14032967 - 14032830
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||  ||||||| || |||    
T  14032967 tgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaatcaaacaccattgaaa 14032868  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||  ||||||||||| | |||||||||||||||||    
T  14032867 attcagcttttcacttttgaggattgtagaatcacttc 14032830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 37640769 - 37640933
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||||||| ||||  | |||||| |||||||||||| ||||||||||||||||||||||||||| |||||||| ||||  |||| ||||||| || |||    
T  37640769 tgattctaggaaagccaaaagctaagatttgtagcttcaaggataattgcttttggaggatagaagcaattcttgaaagccaaaccaaacaccattgaaa 37640868  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    | ||||||||||| |||| | | |||||||||||||||  || ||||||||| |||| |||||||    
T  37640869 actcaatttttcatttttgagggttgtagaatcacttcttggtgctgaaaagccaaaacaaacag 37640933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 386
Target Start/End: Complemental strand, 14033462 - 14033328
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||| ||||||| || |||    
T  14033462 tgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaacaccattgaaa 14033363  T
Q  352 attcaatttttcacttttaaagattgtagaatcac 386  Q
    |||||  ||||||||||| | | ||||||||||||    
T  14033362 attcagcttttcacttttgagggttgtagaatcac 14033328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 274 - 389
Target Start/End: Complemental strand, 7473586 - 7473471
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcacttttaaag 373  Q
    ||||||||||||||| ||||||||||| ||||||||||||||| ||||||||||||   |||| ||||||| || |||| |||||||||||||||| | |    
T  7473586 taggatttgtagcttcaaggataattgtttttggaggatagaagcaattcttaaaaaccaaaccaaacaccattgaaaactcaatttttcacttttgagg 7473487  T
Q  374 attgtagaatcacttc 389  Q
     ||||||||| |||||    
T  7473486 gttgtagaatgacttc 7473471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 99 - 171
Target Start/End: Original strand, 35458036 - 35458109
Alignment:
Q  99 ataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    ||||| ||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||||||||    
T  35458036 ataaacatttttcgggggctaatttggttcgttaagttttctaattaaatatgattcatcaaattaaattacaa 35458109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 44002901 - 44002825
Alignment:
Q  91 tcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||||| | ||||||||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  44002901 tcatgaccataaatattttatgggggctaatttggtttgttatgttttctgattaaatttggttcatcaaattaaat 44002825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 37640596 - 37640679
Alignment:
Q  82 tttgataagtcatgaccataaatatttttc-ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||| |||| ||||||||||||||||||||||| ||||||||| ||||||||||||||    
T  37640596 tttgttaactcatgaccataaacatttttcaggggttaatttggttcgttaagttttctgattaaattttgttcatcaaattaa 37640679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 7473781 - 7473698
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||||||| ||||||||||||  |||||||||| ||||||||| ||||||||||||||    
T  7473781 tttggtaattcatgaccataaacatttttcgggggctaatttggttcactaagttttctgattaaattttgttcatcaaattaa 7473698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 93 - 164
Target Start/End: Original strand, 32497056 - 32497128
Alignment:
Q  93 atgaccataaatatttttcggggc-taatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||||||| ||||||||||   ||||||||||||||||||||||| |||||||||| |||||||||||||    
T  32497056 atgaccataaacatttttcgggtaataatttggttcgttaagttttctgattaaatttgattcatcaaattaa 32497128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 252 - 330
Target Start/End: Original strand, 2443703 - 2443781
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaag 330  Q
    ||||||||||||||  | ||||||||| ||||||||||| ||| ||||| ||||||||||||||| ||||||| |||||    
T  2443703 tgattctagaaaaggcataagctaggaattgtagctttatggagaattgtttttggaggatagaagcaattctgaaaag 2443781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 12015691 - 12015775
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||| ||| |||||||||||||||||||  | ||||||||| |||||| || |||| |||| ||||||||||||| |||||||||    
T  12015691 tttggtaaatcatgaccataaatattttatgaggctaatttcgttcgtcaaattttttaatcaaatttggttcattaaattaaat 12015775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 115 - 171
Target Start/End: Complemental strand, 37996946 - 37996891
Alignment:
Q  115 gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    ||||||||| ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  37996946 gctaatttgattcgttaagttttccgattaaatttggttcatcaaa-taaattacaa 37996891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 14379828 - 14379767
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  14379828 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 14379767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 31686825 - 31686886
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  31686825 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 31686886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 31786867 - 31786806
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  31786867 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 31786806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 40254512 - 40254451
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  40254512 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 40254451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 44282662 - 44282601
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  44282662 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 44282601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 274 - 322
Target Start/End: Original strand, 3739078 - 3739126
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaatt 322  Q
    ||||| ||||||||||||||| ||||||||||||| ||||||| |||||    
T  3739078 taggaattgtagctttaaggaaaattgcttttggatgatagaagcaatt 3739126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 82 - 127
Target Start/End: Complemental strand, 17481051 - 17481005
Alignment:
Q  82 tttgataagtcatgaccataaatatttttc-ggggctaatttggttc 127  Q
    |||| |||||||||| |||||||||||||| ||||||||||||||||    
T  17481051 tttggtaagtcatgatcataaatatttttcgggggctaatttggttc 17481005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 102; Significance: 3e-50; HSPs: 22)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 22936578 - 22936742
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| || ||||||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||| |||||||||||| ||||||    
T  22936578 tgattctagaaaagctataagctaggatttgtagctttaagaataatttattttggaggatagaatcaattcttaaaagtgaaactaaacaccattaaaa 22936677  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    | ||| |||||||||||| ||| |||||||||||||||  || | ||||||||||||||||||||    
T  22936678 actcagtttttcacttttgaaggttgtagaatcacttcttggtgttgaaaagtcaaaccaaacag 22936742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 45276411 - 45276575
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||| |||| ||||||| ||||||    
T  45276411 tgattctagaaaagctagaagctaggatttgtagctttaaggataattgcttttggaggatataatcaatttttaaaagtcaaacaaaacaccattaaaa 45276510  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    ||||| |||||||||||| ||| |||| ||||||||||  |  ||||||||| ||||||||||||    
T  45276511 attcagtttttcacttttgaaggttgttgaatcacttcttgctgctgaaaagccaaaccaaacag 45276575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 8416752 - 8416588
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||  |||  ||||||  ||||||    
T  8416752 tgattctagaaaagctagaagttaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagccaaatcaaacacgattaaaa 8416653  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    |||||||||||||||||| ||  |||||||||||||||  || | ||||||| ||||||||||||    
T  8416652 attcaatttttcacttttgaaagttgtagaatcacttcttggtgttgaaaagccaaaccaaacag 8416588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 22936405 - 22936494
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| ||||||| |||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  22936405 tttggtaagtcacgaccataaatatttttgggggctaatttggttcgttaacttttctaattaaatttggttcatcaaattaaattacaa 22936494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 35802352 - 35802489
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||||||| ||||  | |||||||||| |||||||| ||||||||||||||||||||||||||| ||||| |||||||| |||| ||||||| || |||    
T  35802352 tgattctaggaaagccaaaagctaggatatgtagcttcaaggataattgcttttggaggatagaagcaatttttaaaagtcaaaccaaacaccattgaaa 35802451  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    | |||||||||||||||| | | || ||||||||||||    
T  35802452 actcaatttttcacttttgagggttctagaatcacttc 35802489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 45276243 - 45276327
Alignment:
Q  87 taagtcatgaccataaatatttttcggg-gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||||||||||| |||| |||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45276243 taagtcatgacc-taaacattttttgggcgctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 45276327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 8416926 - 8416836
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggg-gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| ||||||||||||||||| |||||||||| ||||||||||||||| ||||||||||||||| |||||||||||| ||| ||||||||    
T  8416926 tttggtaagtcatgaccataaacatttttcgggtgctaatttggttcgtgaagttttctaattaattttggttcatcatatttaattacaa 8416836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 44238889 - 44238804
Alignment:
Q  304 ttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||||||| |||||||||||||||| ||||||||||||| || ||||||||  ||||||||||| | | |||||||||||||||    
T  44238889 ttggaggatataatcaattcttaaaagctaaactaaacaccattgaaaattcagcttttcacttttgagggttgtagaatcacttc 44238804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 2025767 - 2025691
Alignment:
Q  91 tcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||| ||||||||| | ||||||||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  2025767 tcatgaccacaaatattttatgggggctaatttagttcgttaagttttatgattaaatttggttcatcaaattaaat 2025691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 274 - 382
Target Start/End: Complemental strand, 33165859 - 33165751
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcacttttaaag 373  Q
    ||||| || |||||||||||| |||| ||||| |||||||||| |||||||||||||  |||| ||||||  ||||||| |||||||||||||||| | |    
T  33165859 taggaattatagctttaaggagaattacttttagaggatagaaacaattcttaaaagccaaaccaaacactgttaaaaactcaatttttcacttttgagg 33165760  T
Q  374 attgtagaa 382  Q
     ||||||||    
T  33165759 tttgtagaa 33165751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 160
Target Start/End: Original strand, 35164216 - 35164295
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaa 160  Q
    |||| ||| ||||||||||||| |||| |||| ||||||||||||| |||||||||||| ||||||||||||||||||||    
T  35164216 tttggtaactcatgaccataaacatttatcggaggctaatttggttggttaagttttctgattaaatttggttcatcaaa 35164295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 35802179 - 35802262
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||||||| ||||||||||| |||||||||||| ||||||||  ||||||||||||||    
T  35802179 tttggtaactcatgaccataaacatttttcgggggctaatttggtttgttaagttttctgattaaattgtgttcatcaaattaa 35802262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 382
Target Start/End: Original strand, 36821653 - 36821764
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    ||||| ||| ||||| ||||||||||||||||||||||||||||||| ||||||| |||||  |||| ||||| | || |||| |||| |||||||||||    
T  36821653 aagcttggaattgtaactttaaggataattgcttttggaggatagaagcaattctgaaaagccaaaccaaacaacattgaaaactcaa-ttttcactttt 36821751  T
Q  370 aaagattgtagaa 382  Q
     | | ||||||||    
T  36821752 gaggtttgtagaa 36821764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 3590323 - 3590249
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||||||||  | ||||||||| ||||||||| |||| | ||||||||||||||||||||||||||    
T  3590323 tcatgaccataaatattttctgaggctaatttagttcgttaa-tttttttattaaatttggttcatcaaattaaat 3590249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 13015929 - 13015857
Alignment:
Q  94 tgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||||||  | ||||||||| |||||||| |||| | |||||||||| |||||||||||||||    
T  13015929 tgaccataaatatttttttgtgctaatttgattcgttaaattttttgattaaatttgattcatcaaattaaat 13015857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 36821470 - 36821545
Alignment:
Q  91 tcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttcta-attaaatttggttcatcaaattaa 164  Q
    |||| ||||| |||||||||||||| ||||||||||||| |||||||| |  ||||||||||||||||||||||||    
T  36821470 tcataaccattaatatttttcgggggctaatttggttcgctaagtttttttgattaaatttggttcatcaaattaa 36821545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 112 - 166
Target Start/End: Complemental strand, 33166024 - 33165970
Alignment:
Q  112 ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||||||| |||| | |||||||||| ||| |||||||||||    
T  33166024 ggggctaatttggttcgttaaattttttgattaaatttgtttcctcaaattaaat 33165970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 30210562 - 30210501
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  30210562 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 30210501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 30984339 - 30984400
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  30984339 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 30984400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 34774385 - 34774446
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  34774385 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 34774446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 252 - 316
Target Start/End: Original strand, 35164389 - 35164453
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaa 316  Q
    |||||| || ||||| | || |||||| ||||||||| ||||| |||||||||||||||||||||    
T  35164389 tgattcgaggaaagtcaaaaactaggaattgtagcttcaaggagaattgcttttggaggatagaa 35164453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 7637482 - 7637408
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||||||||| |||||||||||||| | |||| |||  |  ||||||||  |||||||||||||||    
T  7637482 tcatgaccataaatattttttggggctaatttggt-cattaaatttattgtttaaatttatttcatcaaattaaat 7637408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 102; Significance: 3e-50; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 256 - 385
Target Start/End: Complemental strand, 365677 - 365548
Alignment:
Q  256 tctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattc 355  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||| ||||||| ||||||| ||    
T  365677 tctagaaaagttagaagttaggatttgtagctttaaggataattgcttttggatgatagaatcaattcttaaaagtcaaaccaaacaccattaaaaactc 365578  T
Q  356 aatttttcacttttaaagattgtagaatca 385  Q
    |||||||||||||| |||||||||||||||    
T  365577 aatttttcacttttgaagattgtagaatca 365548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 21517365 - 21517502
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||| || |||    
T  21517365 tgattctacaaaagccaaaagctaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagtcaaaccaaacaccattgaaa 21517464  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||| ||||||||||| | | |||||||||||||||    
T  21517465 attcaacttttcacttttgagggttgtagaatcacttc 21517502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 252 - 386
Target Start/End: Complemental strand, 10683257 - 10683125
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||  |||||| ||||||||||||||||||||||||||  |||| ||||||||||||||||||||||||  |||| ||||||| ||||||    
T  10683257 tgattctagaaaaactagaagttaggatttgtagctttaaggataattaattttagaggatagaatcaattcttaaaagccaaaccaaacaccattaaaa 10683158  T
Q  352 attcaatttttcacttttaaagattgtagaatcac 386  Q
    |||||   |||||||||| ||| ||||||||||||    
T  10683157 attca--gtttcacttttgaaggttgtagaatcac 10683125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 10683418 - 10683325
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggggct-aatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaattc 174  Q
    |||| |||||||| |||||||| |||| |||||| | ||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||    
T  10683418 tttggtaagtcattaccataaacatttatcgggggttaatttggtttgttaaattttctaattaaatttggttcatcaaattaaattacaattc 10683325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 27825250 - 27825177
Alignment:
Q  94 tgaccataaatatttttcggggctaatttggttcgttaagttttct-aattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||| | ||||||||||||||||||| |||| |  ||||||||||||||||||||||||||    
T  27825250 tgaccataaatattttttgtggctaatttggttcgttaaattttttggattaaatttggttcatcaaattaaat 27825177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 20838345 - 20838415
Alignment:
Q  97 ccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||  || || |||||| |||||||||||||| | ||||||||||||||||||||||||||    
T  20838345 ccataaatattttatggaggttaatttagttcgttaagttttttgattaaatttggttcatcaaattaaat 20838415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 31746197 - 31746287
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||||||||  | ||| ||||| |||||||| || ||| ||||||||||||||||||||| ||||| | |||||| |||| |||||    
T  31746197 tgattctagaaaagccataagttaggaattgtagctatatggagaattgcttttggaggatagaagcaattttgaaaagtcaaaccaaaca 31746287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 4147053 - 4146992
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggt 152  Q
    ||||| || ||||||||||  ||||||||||||||||||||| |||| | ||||||||||||    
T  4147053 tcatgtccgtaaatattttatggggctaatttggttcgttaaattttttgattaaatttggt 4146992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 30134396 - 30134321
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||| ||||| ||||||||   |||||||||||||  ||||| |||| | ||||||||||||| ||||||||||||    
T  30134396 tcataaccatcaatattttcttgggctaatttggtatgttaacttttttgattaaatttggtttatcaaattaaat 30134321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 141 - 171
Target Start/End: Complemental strand, 365801 - 365771
Alignment:
Q  141 attaaatttggttcatcaaattaaattacaa 171  Q
    |||||||||||||||||||||||||||||||    
T  365801 attaaatttggttcatcaaattaaattacaa 365771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 30018941 - 30018880
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||| ||||| ||||||||| ||  | ||||||||||||||||||    
T  30018941 tgattctaggaaagtaagaagataggaattgtagcttcaactagaattgcttttggaggata 30018880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 102; Significance: 3e-50; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 48254512 - 48254676
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||    
T  48254512 tgattctagaaaagctagaagctaggatttgtagctttaaggataattgcttttggaggatataatcaattcttaaaagtcaaaccaaacaccattaaaa 48254611  T
Q  352 attcaatttttcacttttaaagattgtagaatcact--tcggcgctgaaaagtcaaaccaaacag 414  Q
      ||| |||||||||||| ||| |||||||||||||  | || | ||||||||||||||||||||    
T  48254612 gctcagtttttcacttttgaaggttgtagaatcacttattggtgttgaaaagtcaaaccaaacag 48254676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 7e-48
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 39251566 - 39251402
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||||||||| ||||||||||||||||| ||||||||| |||||||||||| ||||||||||||||||| |||  ||||||| ||||||    
T  39251566 tgattctaaaaaagttagaagttaggatttgtagctttagggataattgtttttggaggatataatcaattcttaaaagtcaaatcaaacaccattaaaa 39251467  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    ||||| |||||||||||||||| |||||||||||||||  || | ||||||||||||| ||||||    
T  39251466 attcagtttttcacttttaaaggttgtagaatcacttcttggtgttgaaaagtcaaactaaacag 39251402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 31813491 - 31813354
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||||||||||| || |||    
T  31813491 tgattctacaaaagccaaaagctaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaactaaacaccattgaaa 31813392  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||  ||||||||||| | | || ||||||||||||    
T  31813391 attcagcttttcacttttgagggttatagaatcacttc 31813354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 82 - 169
Target Start/End: Complemental strand, 39251740 - 39251652
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattac 169  Q
    |||| ||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39251740 tttggtaagtcatgaccataaacatttttcgggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattac 39251652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 270 - 414
Target Start/End: Complemental strand, 45150670 - 45150524
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    ||||||||||||||||||| ||||||||||| ||||||||||||||| |||||||||||||  |||| ||||||| || |||| ||||||||||| ||||    
T  45150670 aagctaggatttgtagcttcaaggataattgtttttggaggatagaaacaattcttaaaagccaaaccaaacaccattgaaaactcaatttttcattttt 45150571  T
Q  370 aaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
     | | || ||||||||||||  || ||||||||| |||| |||||||    
T  45150570 gagggttatagaatcacttcttggtgctgaaaagccaaaacaaacag 45150524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 48254338 - 48254428
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcg-gggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||||||||||||||||||||| |||||||  ||||||||||  ||| |||||||||||||||||||||||||||||||||||||||||||    
T  48254338 tttgataagtcatgaccataaacatttttcaagggctaatttaattccttaagttttctaattaaatttggttcatcaaattaaattacaa 48254428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 30810962 - 30810886
Alignment:
Q  91 tcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  30810962 tcatgaccataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcatcaaattaaat 30810886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 28182624 - 28182550
Alignment:
Q  91 tcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||||||||||||||||||||| ||||||||||||||||||| |||| ||||||||||||||||||||||||    
T  28182624 tcatgaccataaatatttttcgggggctaatttggttcgttaagtcttctgattaaatttggttcatcaaattaa 28182550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 50392669 - 50392740
Alignment:
Q  96 accataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||| | |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  50392669 accataaatattttatgggggctaatttggttcgttaagttttctgattaaatttggttcatcaaattaaat 50392740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 11263954 - 11263871
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcg-gggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||||||| ||||||||||||| |||||||| ||||||||||||||| ||||||||||| ||| ||||| ||||||||||||||    
T  11263954 tttgataactcatgaccataaacatttttcgagggctaatttggttcattaagttttctgattgaattttgttcatcaaattaa 11263871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 45150861 - 45150778
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||||    
T  45150861 tttggtaattcatgaccataaacatttttcgggggctaatttggttcattaagttttctgattaaattttgttcatcaaattaa 45150778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 42274780 - 42274697
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||| ||||| ||||||||||| ||||||||||||| |||||||||| || |||||||||||||||||||||    
T  42274780 tttggtaactcatgactataaacatttttcgggggctaatttggttcgataagttttctgatcaaatttggttcatcaaattaa 42274697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 11263781 - 11263711
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaatt 322  Q
    ||||||||| ||||  | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||    
T  11263781 tgattctaggaaagccaaaagctaggatttgtagcttcaaggataattgcttttggaggatagaagcaatt 11263711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 48181333 - 48181249
Alignment:
Q  82 tttgataagtcatgaccataaatatttttc--ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||   ||||||||||||| |||||||||||||| |||||||||||||||| |||||||    
T  48181333 tttggtaactcatgaccataaacattttttcgggggctaatttggctcgttaagttttctgattaaatttggttcatgaaattaa 48181249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 342
Target Start/End: Original strand, 33025824 - 33025896
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||| | |||||| |||| |||||    
T  33025824 aagctaggaattgtagctttaaggagaattgcttttggaggatagaagcaattttgaaaagtcaaaccaaaca 33025896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 252 - 360
Target Start/End: Complemental strand, 42074482 - 42074374
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||| || ||||| | ||||||||| ||||||||||||||| ||||| ||||||||||||||| ||||||| |||||  |||| ||||| | || |||    
T  42074482 tgattcgagcaaagtcaaaagctaggaattgtagctttaaggagaattgtttttggaggatagaagcaattctgaaaagccaaaccaaacagcattgaaa 42074383  T
Q  352 attcaattt 360  Q
    | |||||||    
T  42074382 actcaattt 42074374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 330
Target Start/End: Complemental strand, 42274590 - 42274530
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaag 330  Q
    ||||||||| ||||| ||||||||| ||||||||||||||||||||||||||||| |||||    
T  42274590 aagctaggaattgtaactttaaggagaattgcttttggaggatagaatcaattctaaaaag 42274530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 51229990 - 51229907
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||||||| ||||||| |||||  |||||||||| ||||||||||  |||||||||||| |||||||||| |||||||||||||    
T  51229990 tttgataactcatgacgataaacttttttcgggggctaatttggtcggttaagttttcttattaaatttgattcatcaaattaa 51229907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 168
Target Start/End: Original strand, 45488952 - 45489030
Alignment:
Q  91 tcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaatta 168  Q
    |||| ||||||||||||||  || || |||||||||||||||| ||||||| |||||||||||||||||||| ||||||    
T  45488952 tcataaccataaatattttctggaggttaatttggttcgttaaattttctagttaaatttggttcatcaaatcaaatta 45489030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 53687213 - 53687295
Alignment:
Q  83 ttgataagtcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||| |||||| |||||| |||||| || ||||||||||||| |||||||||||| ||| ||||||| ||||||||||||    
T  53687213 ttgataactcatgatcataaacattttttggaggctaatttggttggttaagttttcttatttaatttggctcatcaaattaa 53687295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 28883940 - 28883868
Alignment:
Q  94 tgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||| ||||||||||||||||||||| | || | ||||||| |||| ||| |||||||||    
T  28883940 tgaccataaatattttttggggctaatttggttcgttaaatattttgattaaatgtggtacattaaattaaat 28883868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 252 - 324
Target Start/End: Complemental strand, 48181159 - 48181087
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattct 324  Q
    ||||||||| ||||  | ||||||||| |||||| |||||||| ||||||||||||||||||||| |||||||    
T  48181159 tgattctaggaaagccaaaagctaggaattgtagttttaaggagaattgcttttggaggatagaagcaattct 48181087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 28182438 - 28182352
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaattt 360  Q
    ||||| || |||||||||||||||||||| ||||||||||||| ||||||| |||||  |||| ||||| | || |||| |||||||    
T  28182438 taggaattttagctttaaggataattgctgttggaggatagaagcaattctaaaaagccaaaccaaacaacattgaaaactcaattt 28182352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 382
Target Start/End: Complemental strand, 51229817 - 51229688
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||||||| ||||  | ||| ||||| ||||||||||||||| ||||  ||||||||||||||| ||||| | ||||| ||||| ||||| | || |||    
T  51229817 tgattctaggaaagccaaaagttaggaattgtagctttaaggagaattatttttggaggatagaagcaattttgaaaagctaaaccaaacaacattgaaa 51229718  T
Q  352 attcaatttttcacttttaaagattgtagaa 382  Q
    | |||| ||| || |||||||| ||||||||    
T  51229717 actcaa-tttccaattttaaagtttgtagaa 51229688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 52692095 - 52692005
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||| ||||| ||||| ||||| ||||||||| ||  | |||||||||||||||||| |||| ||| |||||||| |||| |||||    
T  52692095 tgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgcttttggaggataaaatctatttttaaaagtcaaaccaaaca 52692005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 44328903 - 44328830
Alignment:
Q  94 tgaccataaatatttttcggggctaatttggttcgtta-agttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||||||  |||||||||||||||||||   |||| | ||||||||||||| ||||||||||||    
T  44328903 tgaccataaatatttttttgggctaatttggttcgttactttttttttattaaatttggtttatcaaattaaat 44328830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 296 - 361
Target Start/End: Complemental strand, 51407510 - 51407445
Alignment:
Q  296 aattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttt 361  Q
    ||||||||||||||||||||| ||||||| |||||  |||| ||||| ||||||||| ||||||||    
T  51407510 aattgcttttggaggatagaagcaattctgaaaagccaaaccaaacaactttaaaaactcaatttt 51407445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 112 - 164
Target Start/End: Complemental strand, 51407696 - 51407644
Alignment:
Q  112 ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||||||||||| |||||||| |||||| |||||||| |||||||||||||||    
T  51407696 ggggctaatttgtttcgttaaattttctgattaaattcggttcatcaaattaa 51407644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 96 - 166
Target Start/End: Original strand, 44610676 - 44610745
Alignment:
Q  96 accataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||  || ||||||||| |||||||  |||| | ||||||||||||||||||||||||||    
T  44610676 accataaatattttatggagctaatttgattcgttagatttt-tgattaaatttggttcatcaaattaaat 44610745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 53687385 - 53687475
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||| ||||||||  | || |||||| ||||||||||||  | ||||||||||||||||||||| ||||| | |||||| |||| |||||    
T  53687385 tgattttagaaaagccaaaacctaggaattgtagctttaacaagaattgcttttggaggatagaagcaattatgaaaagtcaaaccaaaca 53687475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 11257847 - 11257778
Alignment:
Q  320 attcttaaaagttaaactaaacacctttaaaaattcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||||||||  |||| ||||||| || |||| |||||||||||||||| |  ||||||||||||||||    
T  11257847 attcttaaaagccaaaccaaacaccattgaaaactcaatttttcacttttgataattgtagaatcacttc 11257778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 42074642 - 42074572
Alignment:
Q  91 tcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||||||||| ||||||||||| |||  ||||||    ||||||||| ||||||||||||||||||||||||    
T  42074642 tcatgaccataaacatttttcgggggctagcttggtt----aagttttctgattaaatttggttcatcaaattaa 42074572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 47697167 - 47697106
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  47697167 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 47697106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 51129052 - 51129113
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  51129052 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 51129113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 1527699 - 1527638
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||| ||||||||    
T  1527699 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgctttcggaggata 1527638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 47141439 - 47141500
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||  ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  47141439 tgattctaagaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 47141500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 94; Significance: 2e-45; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 25472773 - 25472937
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||  ||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||| ||||||| ||||||    
T  25472773 tgattctagaaaatgtagaagctatgatttgtagcttcaaggataattgcttttggaggatagaatcaattcttaaaagtcaaaccaaacaccattaaaa 25472872  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    | ||||||| ||| |||| ||| |||||||||||||||  || | ||||||| ||||||||||||    
T  25472873 actcaatttgtcatttttgaaggttgtagaatcacttcttggtgttgaaaagccaaaccaaacag 25472937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 30139837 - 30139974
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| ||||| ||||||||| ||||  |||||||||||||||||| |||||||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  30139837 tgattctaaaaaagctagaagctaagattcatagctttaaggataattgtttttggagaatagaatcaattcttaaaagtcaaaccaaacaccattaaaa 30139936  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    | |||| |||||||||||||||||||||||||||||||    
T  30139937 actcaaattttcacttttaaagattgtagaatcacttc 30139974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 252 - 389
Target Start/End: Complemental strand, 12909319 - 12909182
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||| |||| ||||||| || |||    
T  12909319 tgattctacaaaagccaaaagctaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagtcaaaccaaacaccattgaaa 12909220  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||  ||||||||||| | | |||||||||||||||    
T  12909219 attcagcttttcacttttgagggttgtagaatcacttc 12909182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 252 - 383
Target Start/End: Complemental strand, 37371169 - 37371038
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||||||| |||||||||||||  |||| ||||| | ||||||    
T  37371169 tgattctagaaaagctagaagttaggatttgtagctttaaagataattgcttttggaggatagaaccaattcttaaaagccaaaccaaacatcattaaaa 37371070  T
Q  352 attcaatttttcacttttaaagattgtagaat 383  Q
    | | |||||||||||||| ||  |||||||||    
T  37371069 acttaatttttcacttttgaaagttgtagaat 37371038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 87 - 171
Target Start/End: Original strand, 25472604 - 25472689
Alignment:
Q  87 taagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  25472604 taagtcattaccataaatatttttcgggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 25472689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 30139663 - 30139753
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| |||||||||||| |||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30139663 tttggtaagtcatgaccgtaaacatttttcgggggctaatttggttcgttaagttttctaattaaatttggtttatcaaattaaattacaa 30139753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 83 - 164
Target Start/End: Original strand, 43664652 - 43664733
Alignment:
Q  83 ttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||| || |||||||||| |||||| ||||||||||||||||||||| |||||| ||||||||||||||||||||||||    
T  43664652 ttgataactcgtgaccataaacatttttgggggctaatttggttcgttaaattttctgattaaatttggttcatcaaattaa 43664733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 25970505 - 25970393
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    ||||||||| |||||||||||| || |||| |||||||||||||||| |||||||||||||  |||| ||||||| || || ||||||||||||||||||    
T  25970505 aagctaggaattgtagctttaaagagaattacttttggaggatagaagcaattcttaaaagccaaaccaaacaccattgaatattcaatttttcactttt 25970406  T
Q  370 aaagattgtagaa 382  Q
     | | ||||||||    
T  25970405 gatgtttgtagaa 25970393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 26826635 - 26826552
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||||||| |||||||||||||||||||||||| |||||||||||||||||| |||||    
T  26826635 tttggtaactcatgaccataaacatttttcgggggctaatttggttcgttaagttttctgattaaatttggttcatcacattaa 26826552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 15000131 - 15000048
Alignment:
Q  82 tttgataagtcatgaccataaatatttttc-ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||| |||||||||| ||||| ||||||||||| ||||||||||||||||||||||||    
T  15000131 tttggtaactcatgaccataaacatttttcaggggctaattaggttctttaagttttctgattaaatttggttcatcaaattaa 15000048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 91 - 161
Target Start/End: Original strand, 47158067 - 47158137
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaat 161  Q
    |||||| ||||||||||||  || ||||||||||||||||||||||||||||||||| |||||||||||||    
T  47158067 tcatgatcataaatattttctggagctaatttggttcgttaagttttctaattaaatatggttcatcaaat 47158137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 298496 - 298579
Alignment:
Q  83 ttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||| |||||||||||||||||||  || |||||||||| | ||||| |||| | ||||||||||||||||||||||||||    
T  298496 ttgataactcatgaccataaatattttctggagctaatttggattgttaaattttttgattaaatttggttcatcaaattaaat 298579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 83 - 166
Target Start/End: Original strand, 2000007 - 2000089
Alignment:
Q  83 ttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||| |||||||||||||||||||| ||| ||||||||||||||||| |||| | |||||||||| ||| |||||||||||    
T  2000007 ttgataactcatgaccataaatattttttggg-ctaatttggttcgttaaattttttgattaaatttgcttcgtcaaattaaat 2000089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 26827602 - 26827681
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcg-gggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| |||||||| ||||||||||||||||||||||||    ||||||||||||||||||||||||    
T  26827602 tttggtaactcatgaccataaacatttttcgagggctaatttggttcgttaagttt----attaaatttggttcatcaaattaa 26827681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 252 - 322
Target Start/End: Complemental strand, 41064699 - 41064629
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaatt 322  Q
    ||||||||||||||| ||||||||||| ||||||||||| ||| ||||| ||||||||||||||| |||||    
T  41064699 tgattctagaaaagtcagaagctaggaattgtagctttatggagaattgtttttggaggatagaagcaatt 41064629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 14999936 - 14999850
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaattt 360  Q
    ||||| ||||||||||||||| |||| |||||||||||||||||||||||| |||||  |||| ||||| | || |||| |||||||    
T  14999936 taggaattgtagctttaaggagaattacttttggaggatagaatcaattctaaaaagccaaaccaaacaacattgaaaactcaattt 14999850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 280 - 361
Target Start/End: Original strand, 43664850 - 43664931
Alignment:
Q  280 ttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttt 361  Q
    ||||||||||||| | |||||||||||||||||||||| |||||| ||||| ||||  ||||| | || |||||||||||||    
T  43664850 ttgtagctttaagaaaaattgcttttggaggatagaatgaattctgaaaagctaaaacaaacaacattgaaaattcaatttt 43664931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 382
Target Start/End: Complemental strand, 26826450 - 26826342
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcacttttaaag 373  Q
    ||||| ||||| ||||||||| |||| ||||||||||||||||  ||||||||||||  |||| ||| ||| || |||| |||||||| ||||||| | |    
T  26826450 taggaattgtacctttaaggagaattacttttggaggatagaagtaattcttaaaagccaaaccaaataccattgaaaactcaattttccacttttgagg 26826351  T
Q  374 attgtagaa 382  Q
     ||||||||    
T  26826350 tttgtagaa 26826342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 32450996 - 32450929
Alignment:
Q  98 cataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||| |||| |||| |||||||||||||||| |||| || |||||||||||||||||||||||||    
T  32450996 cataaataatttttggggataatttggttcgttaaatttttta-ttaaatttggttcatcaaattaaat 32450929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 47085523 - 47085607
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||| ||| |||||||||||||||||||  | || |||||||||||  ||| |||| | ||||||||||||||||||||||||||    
T  47085523 tttggtaactcatgaccataaatattttatgaggttaatttggttccataaattttttgattaaatttggttcatcaaattaaat 47085607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 25970696 - 25970613
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| |||||||||||||||||||| |  |||||||||| |   ||||||||||| ||||||||||||||||||||||||    
T  25970696 tttggtaattcatgaccataaatattttttgatggctaatttgatctattaagttttctcattaaatttggttcatcaaattaa 25970613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 30825452 - 30825370
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggggc-taatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| |||| ||||||  |||||||||| |||||||||||| ||||||||||||| ||||||||||    
T  30825452 tttggtaactcatgaccataaacatttatcgggggataatttggttggttaagttttctgattaaatttggtt-atcaaattaa 30825370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 270 - 360
Target Start/End: Complemental strand, 30825262 - 30825172
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaattt 360  Q
    ||||||||| ||||| ||||||||| ||||| ||||||||||||||| ||||||| |||||  |||| ||||| | || |||| |||||||    
T  30825262 aagctaggaattgtaactttaaggagaattgtttttggaggatagaagcaattctaaaaaggcaaaccaaacaacattgaaaactcaattt 30825172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 25341482 - 25341543
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  25341482 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 25341543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 31012440 - 31012501
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  31012440 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 31012501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 98 - 166
Target Start/End: Original strand, 25191713 - 25191781
Alignment:
Q  98 cataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||| |||| |||||||||||||||| | || | || || ||||||||||| ||||||||    
T  25191713 cataaatattttttggggttaatttggttcgttaaatcttttgatcaactttggttcatcgaattaaat 25191781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 94; Significance: 2e-45; HSPs: 31)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 31905520 - 31905356
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||| |||||||| || ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||  |||||||  |||||    
T  31905520 tgattgtagaaaagctataagttaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagtcaaaacaaacaccagtaaaa 31905421  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    | |||||||||||||||| ||| || ||||||||||||  || ||||||||| ||||||||||||    
T  31905420 actcaatttttcacttttgaaggttctagaatcacttcttggtgctgaaaagccaaaccaaacag 31905356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 93; E-Value: 7e-45
Query Start/End: Original strand, 252 - 388
Target Start/End: Original strand, 41742230 - 41742366
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| || ||| |||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  41742230 tgattctagaaaagctaaaagttaggatttttagctttaaggacaattgcttttggaggatagaatcaattcttaaaagttaaaccaaacaccattaaaa 41742329  T
Q  352 attcaatttttcacttttaaagattgtagaatcactt 388  Q
    | ||| |||||||||||| |||||| |||||||||||    
T  41742330 actcagtttttcacttttgaagattatagaatcactt 41742366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 86; E-Value: 1e-40
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 37066567 - 37066704
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||| |||||||||||||||||| ||||||||||||| ||||||| || |||||||||||||  |||| ||||||| ||||||    
T  37066567 tgattctagaaaagctagaagttaggatttgtagctttaatgataattgcttttagaggatataaccaattcttaaaagccaaaccaaacaccattaaaa 37066666  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    | ||| |||||||||||||||| |||||||||||||||    
T  37066667 actcagtttttcacttttaaaggttgtagaatcacttc 37066704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 27739359 - 27739496
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||||||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||| |||| ||||||| || |||    
T  27739359 tgattctacaaaagccaaaagctaggatttgtagcttcacggataattgcttttggaggatagaagcaattcttaaaagtcaaaccaaacaccattgaaa 27739458  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||  ||||||||||||| | |||||||||||||||    
T  27739459 attcagcttttcacttttaagggttgtagaatcacttc 27739496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 41742056 - 41742146
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggg-gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| |||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41742056 tttggtaagtcatgaccataaatattttttgggcgctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 41742146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 252 - 416
Target Start/End: Complemental strand, 19356591 - 19356424
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||||||||||| |||||||| ||||||||||| ||||||||||||||||||| |||||||||||||| |||||||||  |||| ||||||| |||| |    
T  19356591 tgattctagaaaaattagaagcaaggatttgtagttttaaggataattgcttttagaggatagaatcaactcttaaaagccaaaccaaacaccattaaga 19356492  T
Q  352 attca-atttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacagac 416  Q
    | |||  ||||||| |||| ||| |||||||||||||||  || | ||||||| ||||||||| ||||    
T  19356491 actcagttttttcatttttgaaggttgtagaatcacttcttggtgttgaaaagccaaaccaaagagac 19356424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 21022640 - 21022777
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||||||||||||||||||| | ||||||||||||| |||||||||||||||||||||||||  |||| ||||||| || |||    
T  21022640 tgattctacaaaagccaaaagctaggatttgtagcttcatggataattgctttaggaggatagaatcaattcttaaaagccaaaccaaacaccattgaaa 21022739  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||  ||||||||||| | | |||||||||||||||    
T  21022740 attcagcttttcacttttgagggttgtagaatcacttc 21022777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 39236904 - 39237041
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||| | ||| ||||||||||||||| | ||||||||| |||||||||||||||||||||||||||||  |||| ||||||| || |||    
T  39236904 tgattctacaaaagtcaaaagttaggatttgtagcttcatggataattgtttttggaggatagaatcaattcttaaaagccaaaccaaacaccattgaaa 39237003  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||  ||||||||||| | | |||||||||||||||    
T  39237004 attcagcttttcacttttgagggttgtagaatcacttc 39237041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 70; E-Value: 4e-31
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 41040144 - 41040281
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||||| ||||||  | ||||||||||||||||||| ||||||||||  ||||||||||||||| |||||||||||||  |||| ||||||| || |||    
T  41040144 tgattcttgaaaagccaaaagctaggatttgtagcttcaaggataattatttttggaggatagaagcaattcttaaaagccaaaccaaacaccattgaaa 41040243  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    | |||||||||||||||| | | |||||||||||||||    
T  41040244 actcaatttttcacttttgagggttgtagaatcacttc 41040281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 252 - 412
Target Start/End: Original strand, 7073283 - 7073445
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||||||||||||||||||| |||||||||| |||||||   |||||| ||||| |||||||  |||| ||||||| ||||||    
T  7073283 tgattctacaaaagccaaaagctaggatttgtagcttcaaggataattacttttgggaaatagaagcaatttttaaaagccaaaccaaacaccattaaaa 7073382  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaac 412  Q
    ||||| |||||||||||| | | |||||||||||||||  ||  |||||||||||||||||||    
T  7073383 attcagtttttcacttttgagggttgtagaatcacttcttggtactgaaaagtcaaaccaaac 7073445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 6e-30
Query Start/End: Original strand, 93 - 171
Target Start/End: Complemental strand, 31905683 - 31905604
Alignment:
Q  93 atgaccataaatatttttcggg-gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  31905683 atgaccataaatattttttgggcgctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 31905604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 252 - 386
Target Start/End: Complemental strand, 33229294 - 33229160
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||| ||||||||||||||| | |||||||||||||||||||||||||||||||||||||||  |||| ||||||| || |||    
T  33229294 tgattctacaaaagccaaaagttaggatttgtagcttcatggataattgcttttggaggatagaatcaattcttaaaagccaaaccaaacaccattgaaa 33229195  T
Q  352 attcaatttttcacttttaaagattgtagaatcac 386  Q
    |||||  ||||||||||| | | ||||||||||||    
T  33229194 attcagcttttcacttttgagggttgtagaatcac 33229160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 63; E-Value: 5e-27
Query Start/End: Original strand, 270 - 388
Target Start/End: Complemental strand, 21022154 - 21022036
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    ||||||||||||||| ||| | ||||||||| |||||||||||||||||||||||||||||  |||| ||||||| || ||||||||  |||||||||||    
T  21022154 aagctaggatttgtaacttcatggataattgtttttggaggatagaatcaattcttaaaagccaaaccaaacaccattgaaaattcagcttttcactttt 21022055  T
Q  370 aaagattgtagaatcactt 388  Q
     | | ||||||||||||||    
T  21022054 gagggttgtagaatcactt 21022036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 10900385 - 10900310
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||| ||||  |||||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  10900385 tcatgaccataaatcttttatggggctaatttggttcgttaagttttctgattaaatttggttcatcaaattaaat 10900310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 11018273 - 11018347
Alignment:
Q  91 tcatgaccataaatatttttc-ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||||||||||||||| | ||||||||||||||||| |||||||| | ||||||||||||||||||||||||    
T  11018273 tcatgaccataaatattttacaggggctaatttggttcgctaagttttttgattaaatttggttcatcaaattaa 11018347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 94 - 166
Target Start/End: Complemental strand, 40979669 - 40979597
Alignment:
Q  94 tgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||  |||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  40979669 tgaccataaatattttatgggggtaatttggtttgttatgttttctgattaaatttggttcatcaaattaaat 40979597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 113 - 161
Target Start/End: Original strand, 53534 - 53582
Alignment:
Q  113 gggctaatttggttcgttaagttttctaattaaatttggttcatcaaat 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||    
T  53534 gggctaatttggttcgttaagttttctaattaaattcggttcatcaaat 53582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 270 - 389
Target Start/End: Original strand, 53693 - 53811
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    ||||||||| ||||||||| ||  ||||||||||||||||||||||| ||||| | |||||  |||| ||||| ||||||||  |||| |||||||||||    
T  53693 aagctaggaattgtagcttcaaccataattgcttttggaggatagaagcaattatgaaaaggcaaaccaaacaactttaaaagctcaa-ttttcactttt 53791  T
Q  370 aaagattgtagaatcacttc 389  Q
     ||| ||||| ||| |||||    
T  53792 caagtttgtaaaatgacttc 53811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 33387544 - 33387619
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||||||||||  | ||||||||| |||| |||| |||| | ||||||||||||||||||||||||||    
T  33387544 tcatgaccataaatattttctgaggctaatttagttcattaatttttttgattaaatttggttcatcaaattaaat 33387619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 41039971 - 41040054
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||||||| |||||||| || | |||||||||| ||||||||| ||||||||||||||    
T  41039971 tttggtaactcatgaccataaacatttttcgggggctaatttgatttgctaagttttctgattaaattttgttcatcaaattaa 41040054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 8958347 - 8958421
Alignment:
Q  91 tcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||||||||| ||||| | |||| |||||||||| ||||||||| || ||||||||||||||||||||||||    
T  8958347 tcatgaccataaacattttatgggggttaatttggttggttaagtttcctgattaaatttggttcatcaaattaa 8958421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 274 - 382
Target Start/End: Original strand, 8958533 - 8958640
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcacttttaaag 373  Q
    ||||| ||||||||||||||| ||||| |||| |||||||||| ||||||| |||||| |||| ||| | | || |||| |||| ||||||||||| |||    
T  8958533 taggaattgtagctttaaggagaattgtttttagaggatagaaacaattctgaaaagtcaaaccaaataacattgaaaactcaa-ttttcacttttgaag 8958631  T
Q  374 attgtagaa 382  Q
     ||||||||    
T  8958632 tttgtagaa 8958640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 25256667 - 25256734
Alignment:
Q  99 ataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||  | ||||||||||||||||||  |||| | ||||||||||||||||||||||||||    
T  25256667 ataaatattttctgaggctaatttggttcgttatattttttgattaaatttggttcatcaaattaaat 25256734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 99 - 166
Target Start/End: Original strand, 25320458 - 25320525
Alignment:
Q  99 ataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||||||||  | ||||||||||||||||||  |||| | ||||||||||||||||||||||||||    
T  25320458 ataaatattttctgaggctaatttggttcgttatattttttgattaaatttggttcatcaaattaaat 25320525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 280 - 360
Target Start/End: Original strand, 11018465 - 11018545
Alignment:
Q  280 ttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaattt 360  Q
    ||||||||||||||||||||| |||| |||||||||| ||||||| ||||   |||| ||||| | || ||||||||||||    
T  11018465 ttgtagctttaaggataattgttttttgaggatagaaacaattctgaaaaaccaaaccaaacaacattgaaaattcaattt 11018545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 3260876 - 3260966
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | |||||||||||||||||| || | ||| | |||||| |||| |||||    
T  3260876 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagtcaaaccaaaca 3260966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 14082981 - 14082891
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | |||||||||||||||||| || | ||| | |||||| |||| |||||    
T  14082981 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttaaaaagtcaaaccaaaca 14082891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 252 - 342
Target Start/End: Complemental strand, 42663524 - 42663434
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | |||||||||||||||||| || | ||| | |||||| |||| |||||    
T  42663524 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggataaaagctattttgaaaagtcaaaccaaaca 42663434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Complemental strand, 2526527 - 2526466
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggt 152  Q
    ||||| || ||||||||||  ||||||||||||||||||||| |||| | ||||||||||||    
T  2526527 tcatgtccgtaaatattttatggggctaatttggttcgttaaattttttgattaaatttggt 2526466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 29542479 - 29542540
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  29542479 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 29542540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 33115124 - 33115063
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  33115124 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 33115063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 94; Significance: 2e-45; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 252 - 414
Target Start/End: Original strand, 28963876 - 28964040
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| |||| ||||||| ||||||    
T  28963876 tgattctagaaaagctagaagttaggatttgtagctttaagaataattgcttttggaggatataatcaattcttaaaagtcaaaccaaacaccattaaaa 28963975  T
Q  352 attcaatttttcacttttaaagattgtagaatcact--tcggcgctgaaaagtcaaaccaaacag 414  Q
    | ||| |||||||||||| ||  |||||||||||||  | || | ||||||||||||||||||||    
T  28963976 actcagtttttcacttttgaatgttgtagaatcacttattggtgttgaaaagtcaaaccaaacag 28964040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 22606368 - 22606505
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||||| | ||||| | ||||||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||||||| ||||||| || |||    
T  22606368 tgattcttggaaagtcaaaagctaggatttgtagcttcacgaataattgcttttggaggatagaagcaattcttaaaagttaaaccaaacaccattgaaa 22606467  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc 389  Q
    |||||||||||| ||||| | | |||||||||||||||    
T  22606468 attcaatttttctcttttgagggttgtagaatcacttc 22606505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 252 - 389
Target Start/End: Original strand, 30418405 - 30418543
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaa-ctaaacacctttaaa 350  Q
    ||||||||| |||| || ||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||  ||| | ||||||| |||||    
T  30418405 tgattctaggaaagctaaaagttaggatttgtagcttgaaggataattgcttttggaggatagaatcaatttttaaaagccaaacccaaacaccattaaa 30418504  T
Q  351 aattcaatttttcacttttaaagattgtagaatcacttc 389  Q
    || ||||||||| |||||| |||||| ||||||||||||    
T  30418505 aactcaattttttacttttgaagattatagaatcacttc 30418543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 252 - 385
Target Start/End: Original strand, 52058260 - 52058393
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||| |||||  | ||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| || |||    
T  52058260 tgattctacaaaagccaaaagctaggatttgtagcttcaaggataattgcttttggaggatagaagcaattcttaaaagtcaaaccaaacaccattgaaa 52058359  T
Q  352 attcaatttttcacttttaaagattgtagaatca 385  Q
    ||||| ||||| |||||| |  ||||||||||||    
T  52058360 attcagttttttacttttgagaattgtagaatca 52058393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 85 - 171
Target Start/End: Original strand, 30418231 - 30418318
Alignment:
Q  85 gataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    ||||||||||||||||||| ||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  30418231 gataagtcatgaccataaacatttttcgggggctaatttgattcgttaagttttctaattaaatttggttcatcaaattaaattacaa 30418318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 82 - 171
Target Start/End: Original strand, 28963703 - 28963793
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcg-gggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||||||||||||||||||||| |||||||  ||||||||||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  28963703 tttgataagtcatgaccataaacatttttcaagggctaatttaattcgttaagttttctaattaaatttggttcatcaaattaaattacaa 28963793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 61; E-Value: 8e-26
Query Start/End: Original strand, 273 - 369
Target Start/End: Complemental strand, 38767860 - 38767764
Alignment:
Q  273 ctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    ||||| |||||||||| ||||||||||||||||||||||||||| |||||||||||||| |||| ||||||| || |||| | ||||||||||||||    
T  38767860 ctaggctttgtagcttcaaggataattgcttttggaggatagaagcaattcttaaaagtcaaaccaaacaccattgaaaacttaatttttcactttt 38767764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 82 - 166
Target Start/End: Original strand, 50523706 - 50523791
Alignment:
Q  82 tttgataagtcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||| ||| ||||||||||||||||||| | ||||||||||||||||||||| |||||| ||||||||||||||||||||||||||    
T  50523706 tttggtaactcatgaccataaatattttatgggggctaatttggttcgttaaattttctgattaaatttggttcatcaaattaaat 50523791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 53663470 - 53663553
Alignment:
Q  82 tttgataagtcatgaccataaatatttttc-ggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||| |||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  53663470 tttggtaactcatgaccataaacatttttcaggggctaattaggttcgttaagttttctgattaaatttggttcatcaaattaa 53663553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 252 - 416
Target Start/End: Original strand, 29386044 - 29386205
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||||||||||||||||||||||| |||||    ||||| |||||||| |||| || |||| |||||||| |||||||  |||||||||||| | ||||    
T  29386044 tgattctagaaaagttagaagctagaatttg----tttaaagataattgattttcgaagataaaatcaattgttaaaagccaaactaaacaccataaaaa 29386139  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacagac 416  Q
    | || | ||||||||||| ||| |||||||||||||||   | | ||||||| ||||||||||||||    
T  29386140 actc-agttttcacttttgaaggttgtagaatcacttctttgtgttgaaaagccaaaccaaacagac 29386205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 83 - 163
Target Start/End: Complemental strand, 8510419 - 8510339
Alignment:
Q  83 ttgataagtcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaatta 163  Q
    ||||||| |||||||||||| ||||||   ||||||||||||||||||||||||||| |||||||||||||||| ||||||    
T  8510419 ttgataattcatgaccataattattttctagggctaatttggttcgttaagttttctgattaaatttggttcattaaatta 8510339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 29385884 - 29385956
Alignment:
Q  87 taagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatca 158  Q
    |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||| |||||||    
T  29385884 taagtcatgaccttaaatatttttcgggggctaatttggttcgttaaattttctaattaaatttgattcatca 29385956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 277 - 385
Target Start/End: Complemental strand, 48407041 - 48406933
Alignment:
Q  277 gatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcacttttaaagatt 376  Q
    |||| ||||||| |||||||||||| |||||||||||||| |||||||||||||| |||  ||||||| || |||| ||||||||||| |||| | | ||    
T  48407041 gattggtagcttcaaggataattgcatttggaggatagaagcaattcttaaaagtcaaatcaaacaccattgaaaactcaatttttcatttttgagggtt 48406942  T
Q  377 gtagaatca 385  Q
    |||||||||    
T  48406941 gtagaatca 48406933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 91 - 164
Target Start/End: Original strand, 22606204 - 22606278
Alignment:
Q  91 tcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||| ||||||||||||||    
T  22606204 tcatgaccataaacatttttcgggggctaatttggttcgctaagttttctgattaaattttgttcatcaaattaa 22606278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 252 - 342
Target Start/End: Original strand, 51834256 - 51834346
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaaca 342  Q
    ||||||||||||||  ||||| ||||| ||||||||||| ||| ||||||||||||||||||||| ||||||| |||||| |||| |||||    
T  51834256 tgattctagaaaagccagaagttaggaattgtagctttatggagaattgcttttggaggatagaagcaattctgaaaagtcaaaccaaaca 51834346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 270 - 371
Target Start/End: Original strand, 53404137 - 53404238
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||| | || ||||||||  |||| ||||| | || |||| ||||||||| ||||||    
T  53404137 aagctaggaattgtagctttaaggagaattgcttttggaggatagaagctatgcttaaaagccaaaccaaacaacattgaaaactcaattttttactttt 53404236  T
Q  370 aa 371  Q
    ||    
T  53404237 aa 53404238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 39733064 - 39732988
Alignment:
Q  91 tcatgaccataaatatttt-tcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||||| | |||| |||||||||| |||| ||||||| ||||||||||||||||||||||||||    
T  39733064 tcatgaccataaatattttatgggggttaatttggtttgttatgttttctgattaaatttggttcatcaaattaaat 39732988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 274 - 330
Target Start/End: Original strand, 53663665 - 53663721
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaag 330  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  53663665 taggaattgtagctttaaggataattgcttttggaggatagaatcaattctaaaaag 53663721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 91 - 166
Target Start/End: Original strand, 16202942 - 16203017
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||||||||| || ||||||||| |||| |||| |||| | ||||||||||||||||||||||||||    
T  16202942 tcatgaccataaatattttccgaggctaatttagttcattaatttttttgattaaatttggttcatcaaattaaat 16203017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 91 - 164
Target Start/End: Complemental strand, 45106060 - 45105986
Alignment:
Q  91 tcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    ||||||||||||| | ||||||||| |||| |||||| |||||||||||| ||||||||||||||||||||||||    
T  45106060 tcatgaccataaacaattttcgggggctaaattggttggttaagttttcttattaaatttggttcatcaaattaa 45105986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 270 - 382
Target Start/End: Complemental strand, 49723855 - 49723744
Alignment:
Q  270 aagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaatttttcactttt 369  Q
    |||||| || |||||||||||| || |||| |||||||||||||||| |||||||||||||  |||| ||||||| ||  ||| ||||||||||||||||    
T  49723855 aagctaagaattgtagctttaacgagaatt-cttttggaggatagaaacaattcttaaaagccaaaccaaacaccattggaaactcaatttttcactttt 49723757  T
Q  370 aaagattgtagaa 382  Q
     | | ||||||||    
T  49723756 gaggtttgtagaa 49723744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 48407215 - 48407132
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||||||||||||||| |||||||| |||| || ||||| | ||||||||| ||||||||||||||    
T  48407215 tttggtaactcatgaccataaatatttttcgggggctaatttgattcgctacgttttatgattaaattttgttcatcaaattaa 48407132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 49724043 - 49723960
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| |||||||  || ||||||||||||||||| |||||| ||||||||||||| ||||||||||    
T  49724043 tttggtaactcatgaccataaacatttttcaaggactaatttggttcgttaatttttctgattaaatttggtttatcaaattaa 49723960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 38768054 - 38767971
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcggg-gctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||| ||||||||| ||||||| || |||||||||||||| |||||||||  ||||||||| ||||||||||||||    
T  38768054 tttggtaactcacgaccataaacatttttcaggtgctaatttggttcgctaagttttccgattaaattttgttcatcaaattaa 38767971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 91 - 166
Target Start/End: Complemental strand, 51677351 - 51677276
Alignment:
Q  91 tcatgaccataaatatttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaat 166  Q
    |||||| |||||||||||   || |||||||||| ||||| | |||| | ||||||||||||||||||||||||||    
T  51677351 tcatgatcataaatatttcctggagctaatttggatcgttgaattttttgattaaatttggttcatcaaattaaat 51677276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 53403951 - 53404029
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| ||||||||| |||||||||||||||||| |||||||      |||||||||||||||||||    
T  53403951 tttggtaactcatgaccataaacatttttcggtggctaatttggttcgttatgttttct-----gatttggttcatcaaattaa 53404029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 91 - 139
Target Start/End: Original strand, 5937737 - 5937786
Alignment:
Q  91 tcatgaccataaatatttt-tcggggctaatttggttcgttaagttttct 139  Q
    |||||| |||||||||||| | ||||||||||||||||||||||||||||    
T  5937737 tcatgatcataaatattttatgggggctaatttggttcgttaagttttct 5937786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 18140542 - 18140481
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  18140542 tgattctaggaaagtaagaagctaggaattgtagcttcaactaaaattgcttttggaggata 18140481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 24038099 - 24038160
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  24038099 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 24038160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 24246708 - 24246647
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  24246708 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 24246647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 31431073 - 31431134
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  31431073 tgattctaggaaagtaagaagctaggaattgtagcttcaactagaattgcttttggaggata 31431134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 252 - 313
Target Start/End: Complemental strand, 49127755 - 49127694
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||||||||| ||||||||| ||  | ||||||||||||||||||    
T  49127755 tgattctaggaaagtaagaagctaggaattgtagcttcaactaaaattgcttttggaggata 49127694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 113 - 161
Target Start/End: Complemental strand, 26457342 - 26457294
Alignment:
Q  113 gggctaatttggttcgttaagttttctaattaaatttggttcatcaaat 161  Q
    ||||||||||| ||||| |||||||||||||||||| ||| ||||||||    
T  26457342 gggctaatttgattcgtcaagttttctaattaaattcggtacatcaaat 26457294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 28911825 - 28911757
Alignment:
Q  98 cataaatatttttcggggctaatttggttcgtt-aagttttctaattaaatttggttcatcaaattaaat 166  Q
    ||||||||||||  ||||||||||||||||||| || |||| | ||||||||||| || |||||||||||    
T  28911825 cataaatattttatggggctaatttggttcgttaaatttttttgattaaatttgg-tcctcaaattaaat 28911757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 252 - 313
Target Start/End: Original strand, 39382995 - 39383056
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggata 313  Q
    ||||||||| ||||| ||||| ||||| ||||||||| ||  | ||||||||||||||||||    
T  39382995 tgattctaggaaagtaagaagttaggaattgtagcttcaactagaattgcttttggaggata 39383056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808 (Bit Score: 92; Significance: 3e-44; HSPs: 2)
Name: scaffold0808
Description:

Target: scaffold0808; HSP #1
Raw Score: 92; E-Value: 3e-44
Query Start/End: Original strand, 252 - 410
Target Start/End: Complemental strand, 4180 - 4021
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    ||||| |||||||| ||||||||||||||| ||||||||| ||||||||||||| ||||||||||||||||||||||||  |||||||||||| ||||||    
T  4180 tgattttagaaaagctagaagctaggatttttagctttaatgataattgcttttcgaggatagaatcaattcttaaaagccaaactaaacaccattaaaa 4081  T
Q  352 attcaatttttcacttttaaagattgtagaatcact-tcggcgctgaaaagtcaaaccaa 410  Q
    ||||| |||||||||||| ||| ||||||||||| | | || ||||||||| ||||||||    
T  4080 attcagtttttcacttttgaaggttgtagaatcattcttggtgctgaaaagccaaaccaa 4021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0808; HSP #2
Raw Score: 78; E-Value: 6e-36
Query Start/End: Original strand, 82 - 174
Target Start/End: Complemental strand, 4351 - 4258
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaattc 174  Q
    |||| ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4351 tttggtaagtcatgaccataaacatttttcgggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaattc 4258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 91; Significance: 1e-43; HSPs: 2)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 91; E-Value: 1e-43
Query Start/End: Original strand, 252 - 414
Target Start/End: Complemental strand, 37785 - 37623
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaa 351  Q
    |||||||||||||| |||||||||  ||||||||||| ||||||||||| |||||||||||||||||||||||||||||  |||| ||||||| ||||||    
T  37785 tgattctagaaaagctagaagcta--atttgtagcttaaaggataattgtttttggaggatagaatcaattcttaaaagccaaaccaaacaccattaaaa 37688  T
Q  352 attcaatttttcacttttaaagattgtagaatcacttc--ggcgctgaaaagtcaaaccaaacag 414  Q
    | |||||||||||||||| ||| |||||||||||||||  || | ||||||| ||||||||||||    
T  37687 actcaatttttcacttttgaaggttgtagaatcacttcttggtgttgaaaagccaaaccaaacag 37623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 82 - 171
Target Start/End: Complemental strand, 37959 - 37869
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgg-ggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 171  Q
    |||| |||||| | |||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37959 tttggtaagtcgttaccataaacatttttcggaggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaaattacaa 37869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 56; Significance: 8e-23; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 17074 - 16991
Alignment:
Q  82 tttgataagtcatgaccataaata-tttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| | ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||    
T  17074 tttggtaactcatgaccataaacactttttcggggctaatttggttcgttaagtttcctaaataaatttggttcatcaaattaa 16991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 16883 - 16797
Alignment:
Q  274 taggatttgtagctttaaggataattgcttttggaggatagaatcaattcttaaaagttaaactaaacacctttaaaaattcaattt 360  Q
    ||||| ||||||||||||  | ||||||||||||||||||||||||||||| |||||  |||| ||||| | || |||| |||||||    
T  16883 taggaattgtagctttaattagaattgcttttggaggatagaatcaattctaaaaagccaaaccaaacaacattgaaaactcaattt 16797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0097 (Bit Score: 52; Significance: 2e-20; HSPs: 2)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 82 - 164
Target Start/End: Original strand, 32897 - 32980
Alignment:
Q  82 tttgataagtcatgaccataaatatttttcgggg-ctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||||||||||||||| || ||||||||||||| ||||||| ||||||||| ||||||||||||||    
T  32897 tttggtaactcatgaccataaatatttttcgggggctgatttggttcgttaggttttctgattaaattttgttcatcaaattaa 32980  T

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Target: scaffold0097; HSP #2
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 252 - 384
Target Start/End: Original strand, 33070 - 33202
Alignment:
Q  252 tgattctagaaaagttagaagctaggatttgtagctttaaggataattgctttt-ggaggatagaatcaattcttaaaagttaaactaaacacctttaaa 350  Q
    |||||||||||||   | ||| ||| ||||||||||| |||||||||||||||| |||| |||||| ||||| |||||||| |||||||| | | || ||    
T  33070 tgattctagaaaaaccaaaagttagaatttgtagctt-aaggataattgctttttggagaatagaagcaatttttaaaagtcaaactaaatatcattgaa 33168  T
Q  351 aattcaatttttcacttttaaagattgtagaatc 384  Q
    || ||||||||||| |||| | ||||||||||||    
T  33169 aactcaatttttcatttttgaggattgtagaatc 33202  T

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Target: scaffold0006 (Bit Score: 48; Significance: 5e-18; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 82 - 164
Target Start/End: Complemental strand, 91799 - 91716
Alignment:
Q  82 tttgataagtcatgaccataaata-tttttcggggctaatttggttcgttaagttttctaattaaatttggttcatcaaattaa 164  Q
    |||| ||| ||||||||||||| | |||||||||||| |||||||||||||| |||||| | ||||||||||||||||||||||    
T  91799 tttggtaattcatgaccataaacactttttcggggctgatttggttcgttaaattttctgaataaatttggttcatcaaattaa 91716  T

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Target: scaffold0006; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 274 - 330
Target Start/End: Complemental strand, 91604 - 91546
Alignment:
Q  274 taggatttgtagctttaaggataat--tgcttttggaggatagaatcaattcttaaaag 330  Q
    ||||| ||||||||||||| | |||  |||||||||||||||||||||||||| |||||    
T  91604 taggaattgtagctttaagtagaatattgcttttggaggatagaatcaattctaaaaag 91546  T

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