View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20816_low_83 (Length: 252)
Name: NF20816_low_83
Description: NF20816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20816_low_83 |
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Alignment Details
Target: chr7 (Bit Score: 111; Significance: 4e-56; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 23 - 193
Target Start/End: Original strand, 25688655 - 25688824
Alignment:
| Q |
23 |
cgaatctgagactctaagaaaaatattccatggtttcagatcaacaccactaaaccatcctaaataggtttgaacaaagaaatcatataattgaccaaac |
122 |
Q |
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||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||| ||||||||||||| ||||||| |
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| T |
25688655 |
cgaatctgagactctaagaaaaatattccatggttccaaatcaacaccactaaaccatcttaaataggtttgaacgaagaaatcatatagagtaccaaac |
25688754 |
T |
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| Q |
123 |
tcatatccataatgtgcaaagtagctttcccaaacgcatgttaacattttacacattgtccacacagtagc |
193 |
Q |
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|||||||||||||||| ||||| ||||| |||| ||||||||||| ||||||||||||||||| ||||||| |
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| T |
25688755 |
tcatatccataatgtgaaaagtggcttt-ccaatcgcatgttaaccttttacacattgtccacccagtagc |
25688824 |
T |
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