View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20816_low_84 (Length: 251)
Name: NF20816_low_84
Description: NF20816
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20816_low_84 |
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Alignment Details
Target: chr4 (Bit Score: 220; Significance: 1e-121; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 220; E-Value: 1e-121
Query Start/End: Original strand, 15 - 250
Target Start/End: Original strand, 7332509 - 7332744
Alignment:
| Q |
15 |
agatttcatgcaaataaaggatatttttaatttattttccaccttttctaattaagattattctttatcgtcaataagaattaatgttgtaaaattcttg |
114 |
Q |
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| T |
7332509 |
agatttcatgcaaataaaggatatttttaatttattttccagcttttctaattaggattattctttatggtcaataagaattaatgttgtaaaattcttg |
7332608 |
T |
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| Q |
115 |
caagaaatctaaaacacaaaaggttaattactcattgcatattctaatgaacaacattgtcataaatgtttacttttctatattctttcaattgattgtt |
214 |
Q |
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| T |
7332609 |
caagaaatctaaaacacaaaaggttaattactcattgcatattctaatgaacaacattgtcataaatgtttacttttctatattctttcaattgattgtt |
7332708 |
T |
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| Q |
215 |
cattgcatgttggagaatatatacaaaataatgcag |
250 |
Q |
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| T |
7332709 |
cattgcatgttggagaatatatacaaaacaatgcag |
7332744 |
T |
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