View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20817_high_2 (Length: 758)

Name: NF20817_high_2
Description: NF20817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20817_high_2
NF20817_high_2
[»] scaffold0003 (2 HSPs)
scaffold0003 (1-465)||(48062-48520)
scaffold0003 (394-456)||(47131-47193)
[»] chr6 (28 HSPs)
chr6 (1-465)||(27438842-27439300)
chr6 (258-452)||(13800096-13800287)
chr6 (391-465)||(33807741-33807815)
chr6 (393-465)||(22299895-22299967)
chr6 (394-456)||(27440168-27440230)
chr6 (400-465)||(8412315-8412380)
chr6 (206-304)||(9928392-9928506)
chr6 (393-465)||(8411138-8411210)
chr6 (391-465)||(31740262-31740336)
chr6 (81-171)||(9928122-9928215)
chr6 (197-240)||(13800346-13800389)
chr6 (394-465)||(31738415-31738486)
chr6 (394-465)||(33802010-33802081)
chr6 (664-730)||(12194463-12194529)
chr6 (394-465)||(9927658-9927728)
chr6 (394-465)||(18139480-18139551)
chr6 (394-460)||(293633-293699)
chr6 (408-465)||(5311331-5311388)
chr6 (394-459)||(14328767-14328832)
chr6 (394-459)||(14421777-14421842)
chr6 (667-730)||(9440257-9440320)
chr6 (400-465)||(8447273-8447338)
chr6 (400-465)||(8456077-8456142)
chr6 (681-730)||(9352197-9352246)
chr6 (681-730)||(13492467-13492516)
chr6 (210-254)||(13800307-13800352)
chr6 (681-730)||(17027493-17027542)
chr6 (665-730)||(28780245-28780310)
[»] chr5 (46 HSPs)
chr5 (210-460)||(38473364-38473614)
chr5 (2-178)||(38473137-38473316)
chr5 (393-465)||(15613557-15613629)
chr5 (344-465)||(5384289-5384410)
chr5 (394-465)||(42510166-42510237)
chr5 (347-465)||(1273141-1273259)
chr5 (394-459)||(12830931-12830996)
chr5 (394-459)||(12862911-12862976)
chr5 (393-465)||(22812379-22812451)
chr5 (398-465)||(1663239-1663306)
chr5 (6-86)||(5206590-5206672)
chr5 (394-465)||(42979500-42979571)
chr5 (400-465)||(15614959-15615024)
chr5 (400-465)||(26404209-26404274)
chr5 (400-460)||(10085844-10085904)
chr5 (393-465)||(42980701-42980773)
chr5 (394-465)||(12933803-12933874)
chr5 (394-465)||(21387689-21387760)
chr5 (394-460)||(5382999-5383065)
chr5 (391-465)||(15857608-15857682)
chr5 (409-459)||(22819557-22819607)
chr5 (401-465)||(19525288-19525352)
chr5 (399-459)||(24761719-24761779)
chr5 (410-465)||(18678028-18678083)
chr5 (394-465)||(18693750-18693821)
chr5 (391-458)||(21389133-21389200)
chr5 (398-465)||(26403359-26403426)
chr5 (391-465)||(18695637-18695711)
chr5 (410-460)||(19827149-19827199)
chr5 (394-448)||(22819510-22819564)
chr5 (394-452)||(38471354-38471412)
chr5 (681-730)||(189203-189252)
chr5 (410-459)||(2167523-2167572)
chr5 (400-465)||(15509247-15509312)
chr5 (400-465)||(15510262-15510327)
chr5 (345-450)||(32735423-32735528)
chr5 (412-465)||(42511677-42511730)
chr5 (393-465)||(8762392-8762464)
chr5 (406-465)||(7345395-7345454)
chr5 (393-440)||(10084675-10084722)
chr5 (394-465)||(12947964-12948035)
chr5 (681-730)||(2193951-2194000)
chr5 (681-730)||(2474094-2474143)
chr5 (681-730)||(8641996-8642045)
chr5 (400-465)||(22650627-22650692)
chr5 (394-459)||(40058076-40058141)
[»] chr4 (53 HSPs)
chr4 (556-748)||(23091341-23091534)
chr4 (400-465)||(33377363-33377428)
chr4 (393-460)||(33376275-33376342)
chr4 (391-465)||(44304969-44305043)
chr4 (394-465)||(34438458-34438529)
chr4 (394-465)||(44302772-44302843)
chr4 (326-465)||(46795951-46796090)
chr4 (323-465)||(15787425-15787566)
chr4 (400-465)||(5687227-5687292)
chr4 (394-465)||(30683020-30683091)
chr4 (339-465)||(11113794-11113920)
chr4 (394-460)||(15446663-15446729)
chr4 (400-454)||(26788585-26788639)
chr4 (395-465)||(34439654-34439724)
chr4 (394-454)||(86866-86926)
chr4 (394-465)||(11094578-11094649)
chr4 (394-465)||(35787848-35787919)
chr4 (391-465)||(28103476-28103550)
chr4 (400-465)||(1273432-1273497)
chr4 (400-465)||(5688636-5688701)
chr4 (344-465)||(27408815-27408936)
chr4 (400-465)||(37560298-37560363)
chr4 (318-459)||(38417611-38417752)
chr4 (400-465)||(44128333-44128398)
chr4 (400-465)||(55953851-55953916)
chr4 (394-465)||(11114973-11115044)
chr4 (664-735)||(13266216-13266287)
chr4 (394-465)||(17319094-17319165)
chr4 (326-465)||(47667230-47667369)
chr4 (391-465)||(307795-307869)
chr4 (394-460)||(31712499-31712565)
chr4 (404-465)||(27410686-27410746)
chr4 (394-459)||(38419010-38419075)
chr4 (681-730)||(44471281-44471330)
chr4 (681-730)||(50814781-50814830)
chr4 (400-465)||(53400237-53400302)
chr4 (400-460)||(3217608-3217668)
chr4 (373-465)||(29686308-29686400)
chr4 (393-465)||(40146615-40146687)
chr4 (667-730)||(12691941-12692004)
chr4 (394-465)||(15787004-15787075)
chr4 (394-465)||(39592282-39592353)
chr4 (394-465)||(47668590-47668661)
chr4 (579-621)||(24629291-24629333)
chr4 (345-459)||(50531700-50531814)
chr4 (392-465)||(10403408-10403481)
chr4 (681-730)||(24628933-24628982)
chr4 (420-465)||(26393146-26393191)
chr4 (420-465)||(29663694-29663739)
chr4 (681-730)||(35871762-35871811)
chr4 (400-465)||(37559050-37559115)
chr4 (394-459)||(44159143-44159208)
chr4 (681-730)||(44470831-44470880)
[»] chr1 (54 HSPs)
chr1 (279-452)||(14171148-14171319)
chr1 (393-465)||(13641309-13641381)
chr1 (399-465)||(3978096-3978162)
chr1 (400-465)||(3979312-3979377)
chr1 (395-465)||(36511325-36511395)
chr1 (400-465)||(26056146-26056211)
chr1 (393-465)||(47560191-47560263)
chr1 (394-465)||(19466198-19466269)
chr1 (394-465)||(21277046-21277117)
chr1 (394-465)||(36509863-36509934)
chr1 (391-465)||(9592290-9592364)
chr1 (400-465)||(25787163-25787228)
chr1 (400-465)||(47136686-47136751)
chr1 (400-465)||(47411447-47411512)
chr1 (322-465)||(26054949-26055092)
chr1 (394-465)||(51726837-51726908)
chr1 (394-456)||(40811256-40811318)
chr1 (391-465)||(49139853-49139927)
chr1 (391-465)||(50679811-50679885)
chr1 (394-459)||(22167837-22167902)
chr1 (400-465)||(25786020-25786085)
chr1 (400-465)||(35683107-35683172)
chr1 (400-465)||(47411036-47411101)
chr1 (401-465)||(14071203-14071267)
chr1 (391-465)||(13929347-13929421)
chr1 (391-465)||(51725395-51725469)
chr1 (400-465)||(2237977-2238042)
chr1 (400-465)||(14390310-14390375)
chr1 (400-465)||(16217492-16217557)
chr1 (400-465)||(16218477-16218542)
chr1 (400-465)||(48935109-48935174)
chr1 (325-465)||(52741540-52741681)
chr1 (401-465)||(13930675-13930739)
chr1 (404-460)||(19464657-19464713)
chr1 (393-465)||(52181297-52181369)
chr1 (410-465)||(14169671-14169726)
chr1 (400-459)||(14765093-14765152)
chr1 (675-729)||(8278093-8278147)
chr1 (579-730)||(20054397-20054547)
chr1 (579-730)||(20054853-20055003)
chr1 (579-730)||(20055309-20055459)
chr1 (579-730)||(20055765-20055915)
chr1 (579-730)||(20056221-20056371)
chr1 (579-730)||(20057124-20057274)
chr1 (579-730)||(20057580-20057730)
chr1 (579-621)||(38341149-38341191)
chr1 (400-465)||(2236865-2236930)
chr1 (681-730)||(16451895-16451944)
chr1 (681-730)||(16461048-16461097)
chr1 (400-465)||(42248304-42248369)
chr1 (681-730)||(46693697-46693746)
chr1 (400-465)||(48973250-48973315)
chr1 (681-730)||(52250678-52250727)
chr1 (681-730)||(52251015-52251064)
[»] chr2 (33 HSPs)
chr2 (263-452)||(25569834-25570021)
chr2 (394-465)||(23177726-23177797)
chr2 (394-465)||(23588983-23589054)
chr2 (391-465)||(6706978-6707052)
chr2 (393-465)||(1624968-1625040)
chr2 (394-465)||(14509261-14509332)
chr2 (197-240)||(25570084-25570127)
chr2 (400-465)||(2581855-2581920)
chr2 (400-465)||(12852938-12853003)
chr2 (391-458)||(40174754-40174821)
chr2 (400-465)||(2305592-2305657)
chr2 (400-465)||(4829517-4829582)
chr2 (400-465)||(42027245-42027310)
chr2 (393-465)||(35801037-35801109)
chr2 (394-465)||(7037018-7037089)
chr2 (401-460)||(12959705-12959764)
chr2 (393-460)||(42246648-42246715)
chr2 (664-730)||(8256661-8256727)
chr2 (391-465)||(10368375-10368449)
chr2 (681-730)||(33771136-33771185)
chr2 (681-730)||(41754424-41754473)
chr2 (400-460)||(2306660-2306720)
chr2 (399-459)||(14510507-14510567)
chr2 (411-465)||(11386676-11386730)
chr2 (427-465)||(12854130-12854168)
chr2 (210-248)||(25570052-25570090)
chr2 (394-460)||(28109862-28109928)
chr2 (688-730)||(32377685-32377727)
chr2 (681-730)||(11388322-11388371)
chr2 (400-465)||(15650493-15650558)
chr2 (681-730)||(25337959-25338008)
chr2 (400-465)||(29424611-29424676)
chr2 (400-465)||(35799564-35799629)
[»] chr8 (43 HSPs)
chr8 (391-465)||(37274939-37275013)
chr8 (319-465)||(36939951-36940097)
chr8 (400-465)||(36070230-36070295)
chr8 (400-460)||(31625383-31625443)
chr8 (394-465)||(13367043-13367114)
chr8 (400-465)||(16363811-16363876)
chr8 (404-465)||(38591010-38591071)
chr8 (394-452)||(117113-117171)
chr8 (391-465)||(24068382-24068456)
chr8 (348-465)||(10053691-10053808)
chr8 (339-455)||(39323849-39323965)
chr8 (394-465)||(7486129-7486200)
chr8 (402-465)||(24069447-24069510)
chr8 (394-465)||(37276236-37276307)
chr8 (582-733)||(22548859-22549009)
chr8 (394-456)||(35943969-35944031)
chr8 (394-460)||(39546670-39546736)
chr8 (401-465)||(29738343-29738407)
chr8 (394-465)||(19913544-19913615)
chr8 (347-465)||(19914852-19914970)
chr8 (391-465)||(29739633-29739707)
chr8 (344-465)||(34616181-34616307)
chr8 (394-440)||(36938758-36938804)
chr8 (406-459)||(2421298-2421351)
chr8 (394-459)||(8095404-8095469)
chr8 (394-459)||(20308663-20308728)
chr8 (394-459)||(21095296-21095361)
chr8 (400-465)||(31623958-31624023)
chr8 (394-459)||(41522681-41522746)
chr8 (400-465)||(41867915-41867980)
chr8 (400-465)||(43275802-43275867)
chr8 (400-460)||(45385793-45385853)
chr8 (582-730)||(22548413-22548560)
chr8 (394-465)||(37472455-37472526)
chr8 (410-465)||(43277930-43277985)
chr8 (394-448)||(8395064-8395118)
chr8 (354-460)||(45195757-45195863)
chr8 (400-465)||(1570205-1570270)
chr8 (681-730)||(10844577-10844626)
chr8 (681-730)||(12827216-12827265)
chr8 (394-455)||(21961885-21961946)
chr8 (681-730)||(25144907-25144956)
chr8 (681-730)||(27022300-27022349)
[»] chr3 (58 HSPs)
chr3 (322-465)||(32980373-32980516)
chr3 (393-465)||(47855330-47855402)
chr3 (394-459)||(23559877-23559942)
chr3 (391-456)||(19252992-19253057)
chr3 (394-455)||(25583176-25583237)
chr3 (400-465)||(29536766-29536831)
chr3 (400-465)||(42632758-42632823)
chr3 (400-465)||(54653965-54654030)
chr3 (394-465)||(8371272-8371343)
chr3 (394-465)||(32979140-32979211)
chr3 (398-465)||(47808103-47808170)
chr3 (391-465)||(11220648-11220722)
chr3 (400-460)||(47806875-47806934)
chr3 (393-443)||(29537134-29537184)
chr3 (400-465)||(11219482-11219547)
chr3 (400-465)||(41386182-41386247)
chr3 (400-465)||(51825620-51825685)
chr3 (393-465)||(7820442-7820514)
chr3 (393-465)||(10987645-10987717)
chr3 (391-455)||(25585823-25585887)
chr3 (421-465)||(51401371-51401415)
chr3 (322-405)||(21515375-21515458)
chr3 (394-465)||(26798899-26798970)
chr3 (330-465)||(43345371-43345506)
chr3 (326-465)||(47766876-47767015)
chr3 (318-465)||(48252985-48253132)
chr3 (394-465)||(53808370-53808441)
chr3 (400-450)||(2124096-2124146)
chr3 (347-465)||(8372562-8372680)
chr3 (579-730)||(14820289-14820439)
chr3 (339-465)||(17345363-17345488)
chr3 (395-465)||(19622057-19622127)
chr3 (400-458)||(42633885-42633943)
chr3 (393-439)||(47854565-47854611)
chr3 (400-465)||(32973191-32973256)
chr3 (400-465)||(32974222-32974287)
chr3 (400-465)||(41387432-41387497)
chr3 (400-465)||(43103295-43103360)
chr3 (400-465)||(48035323-48035388)
chr3 (400-465)||(53047949-53048014)
chr3 (400-465)||(53049036-53049101)
chr3 (393-456)||(13077943-13078006)
chr3 (394-465)||(17350095-17350166)
chr3 (400-459)||(36626789-36626848)
chr3 (401-460)||(43101951-43102010)
chr3 (664-730)||(31284221-31284287)
chr3 (393-459)||(48866199-48866265)
chr3 (681-730)||(11179996-11180045)
chr3 (681-730)||(13150516-13150565)
chr3 (410-459)||(21127983-21128032)
chr3 (681-730)||(32227183-32227232)
chr3 (681-730)||(32227635-32227684)
chr3 (681-730)||(32386696-32386745)
chr3 (400-465)||(39287522-39287587)
chr3 (679-740)||(41474122-41474183)
chr3 (318-383)||(45422082-45422147)
chr3 (681-730)||(50347881-50347930)
chr3 (408-465)||(54752668-54752725)
[»] chr7 (50 HSPs)
chr7 (314-402)||(27897807-27897896)
chr7 (391-458)||(13446648-13446715)
chr7 (339-465)||(40926457-40926583)
chr7 (400-465)||(22746319-22746384)
chr7 (400-465)||(46674933-46674998)
chr7 (400-460)||(19278410-19278470)
chr7 (401-465)||(46458713-46458777)
chr7 (394-455)||(43930381-43930442)
chr7 (393-465)||(22744798-22744870)
chr7 (400-456)||(36702949-36703005)
chr7 (393-465)||(47163205-47163277)
chr7 (394-465)||(4857253-4857324)
chr7 (635-730)||(5406504-5406599)
chr7 (326-465)||(28326315-28326454)
chr7 (394-465)||(38406070-38406141)
chr7 (347-465)||(14107884-14108002)
chr7 (347-465)||(14417841-14417959)
chr7 (391-465)||(24873587-24873661)
chr7 (394-460)||(26406182-26406248)
chr7 (400-465)||(19279611-19279676)
chr7 (396-465)||(41126291-41126360)
chr7 (394-454)||(27899207-27899267)
chr7 (393-465)||(35127862-35127934)
chr7 (393-465)||(43935237-43935309)
chr7 (393-465)||(43936132-43936204)
chr7 (400-455)||(22061794-22061849)
chr7 (410-465)||(25153710-25153765)
chr7 (667-730)||(28495989-28496052)
chr7 (391-465)||(14206725-14206799)
chr7 (391-465)||(14215415-14215489)
chr7 (681-730)||(2193391-2193440)
chr7 (681-730)||(13122467-13122516)
chr7 (400-465)||(22060515-22060580)
chr7 (400-465)||(43007648-43007713)
chr7 (400-460)||(48672774-48672834)
chr7 (413-456)||(36702838-36702881)
chr7 (326-465)||(41515048-41515187)
chr7 (400-459)||(43006443-43006502)
chr7 (410-465)||(46457122-46457177)
chr7 (402-465)||(48671130-48671192)
chr7 (681-730)||(2465868-2465917)
chr7 (681-730)||(2941719-2941768)
chr7 (681-730)||(7646550-7646599)
chr7 (681-730)||(13125098-13125147)
chr7 (681-730)||(28495570-28495619)
chr7 (400-465)||(30223975-30224040)
chr7 (400-465)||(33458362-33458426)
chr7 (681-730)||(34405553-34405602)
chr7 (400-465)||(34557449-34557514)
chr7 (681-730)||(42515679-42515728)
[»] scaffold0024 (1 HSPs)
scaffold0024 (325-434)||(72910-73019)
[»] scaffold0051 (2 HSPs)
scaffold0051 (391-465)||(22179-22253)
scaffold0051 (394-460)||(39894-39960)
[»] scaffold1974 (1 HSPs)
scaffold1974 (394-465)||(621-692)
[»] scaffold1878 (1 HSPs)
scaffold1878 (394-465)||(582-653)
[»] scaffold0290 (2 HSPs)
scaffold0290 (394-465)||(9471-9542)
scaffold0290 (391-465)||(8431-8505)
[»] scaffold0098 (1 HSPs)
scaffold0098 (391-457)||(42336-42402)
[»] scaffold2127 (1 HSPs)
scaffold2127 (400-465)||(514-579)
[»] scaffold0025 (2 HSPs)
scaffold0025 (323-460)||(54648-54785)
scaffold0025 (405-460)||(56704-56759)
[»] scaffold0013 (1 HSPs)
scaffold0013 (344-465)||(96212-96333)
[»] scaffold0166 (1 HSPs)
scaffold0166 (399-459)||(4216-4276)
[»] scaffold0007 (1 HSPs)
scaffold0007 (393-465)||(145861-145933)
[»] scaffold0137 (1 HSPs)
scaffold0137 (667-730)||(7077-7140)
[»] scaffold0045 (1 HSPs)
scaffold0045 (398-465)||(77178-77245)
[»] scaffold0177 (1 HSPs)
scaffold0177 (400-460)||(1812-1872)
[»] scaffold0022 (1 HSPs)
scaffold0022 (667-730)||(163082-163145)
[»] scaffold0122 (1 HSPs)
scaffold0122 (394-444)||(16018-16068)
[»] scaffold0499 (1 HSPs)
scaffold0499 (681-730)||(2013-2062)
[»] scaffold0322 (1 HSPs)
scaffold0322 (681-730)||(19101-19150)
[»] scaffold0277 (1 HSPs)
scaffold0277 (681-730)||(14664-14713)
[»] scaffold0243 (1 HSPs)
scaffold0243 (681-730)||(1355-1404)
[»] scaffold0020 (1 HSPs)
scaffold0020 (681-730)||(107425-107474)
[»] scaffold0015 (1 HSPs)
scaffold0015 (394-455)||(207791-207852)


Alignment Details
Target: scaffold0003 (Bit Score: 336; Significance: 0; HSPs: 2)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 465
Target Start/End: Original strand, 48062 - 48520
Alignment:
Q  1 aaaccgtaagtgtggatctttaaaggttctgaaagttttatttattgtagccgatgatcaaattctaagaagaaaatgacattgttgttgacgatttctg 100  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  48062 aaaccgtaagtgtggacctttaaaggttttgaaagatttatttattgtagccgataatcaaattctaagaagaaaaagacattgttgttgacgatttctg 48161  T
Q  101 gatttaagaaattggaggtgtggtgataatatgagatgatgattttgttgttgattattattgataaatttctatggacnnnnnnnatgagtgttaaaag 200  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||||||||| |||     
T  48162 gatttaagaaattggaggt---gtgataatatgagatgatgattttgttgttgattactattgataaatttctatggactttttttatgagtgtt-aaac 48257  T
Q  201 aaggtgttgttgatgtgtttaagattttaggatttgatgtattttttggttctgcatatttgaagttctgcatagtatgatgaagagagaagatgaagaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  48258 aaggtgttgttgatgtgtttaagattttaggatttgatgtattttttggttctgcatatttgaagtt-tgcatagtatgaagaagagagaagatgaagaa 48356  T
Q  301 aactgtnnnnnnntcaagtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaatt 400  Q
    ||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  48357 aaccgt-aaaaaatcaagtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatatcaagaataatatattttaaaaaatt 48455  T
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  48456 aacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagt 48520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 47193 - 47131
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  47193 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagaca 47131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 336; Significance: 0; HSPs: 28)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 336; E-Value: 0
Query Start/End: Original strand, 1 - 465
Target Start/End: Complemental strand, 27439300 - 27438842
Alignment:
Q  1 aaaccgtaagtgtggatctttaaaggttctgaaagttttatttattgtagccgatgatcaaattctaagaagaaaatgacattgttgttgacgatttctg 100  Q
    |||||||||||||||| ||||||||||| |||||| ||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||    
T  27439300 aaaccgtaagtgtggacctttaaaggttttgaaagatttatttattgtagccgataatcaaattctaagaagaaaaagacattgttgttgacgatttctg 27439201  T
Q  101 gatttaagaaattggaggtgtggtgataatatgagatgatgattttgttgttgattattattgataaatttctatggacnnnnnnnatgagtgttaaaag 200  Q
    |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||       ||||||||| |||     
T  27439200 gatttaagaaattggaggt---gtgataatatgagatgatgattttgttgttgattactattgataaatttctatggactttttttatgagtgtt-aaac 27439105  T
Q  201 aaggtgttgttgatgtgtttaagattttaggatttgatgtattttttggttctgcatatttgaagttctgcatagtatgatgaagagagaagatgaagaa 300  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||||    
T  27439104 aaggtgttgttgatgtgtttaagattttaggatttgatgtattttttggttctgcatatttgaagtt-tgcatagtatgaagaagagagaagatgaagaa 27439006  T
Q  301 aactgtnnnnnnntcaagtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaatt 400  Q
    ||| ||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  27439005 aaccgt-aaaaaatcaagtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatatcaagaataatatattttaaaaaatt 27438907  T
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||    
T  27438906 aacggagatgaccaaaagagtaaacggcagaatatttatgggatcaaattgagacactttatagt 27438842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 258 - 452
Target Start/End: Complemental strand, 13800287 - 13800096
Alignment:
Q  258 atttgaagttctgcatagtatgatgaagagagaagatgaagaaaactgtnnnnnnntcaagtgttgatggttcactcttagatactatagacctgcaatc 357  Q
    |||| ||||||||  |||||||||||||||||||||||||| ||||| |       |||||||||||||||||||||||| |||||||||||||||||||    
T  13800287 atttaaagttctgtgtagtatgatgaagagagaagatgaagtaaactataaaaa--tcaagtgttgatggttcactcttaaatactatagacctgcaatc 13800190  T
Q  358 aagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattga 452  Q
    ||||||||||||| |||| ||||||||||||  |||||||| ||||  | |  ||||||| |||| ||||   ||||||||||||| ||||||||    
T  13800189 aagtggttaaaatgatatcaagaataatatacattaaaaaactaac-aaaaaaaccaaaacagtatacggagaaagatttatgggaccaaattga 13800096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 33807815 - 33807741
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||||||||  ||||||||||||| |||||||| |||||||||||||||||| ||||    
T  33807815 ttaaaaaattaacggagaggaccaaaacggtaaacggcagaaaatttatggcatcaaattgagacactttatagt 33807741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 22299895 - 22299967
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  22299895 aaaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagt 22299967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 394 - 456
Target Start/End: Original strand, 27440168 - 27440230
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    |||||||||||||||||||||||| ||||||||| ||||||||||||||| ||||||||||||    
T  27440168 aaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagaca 27440230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 8412315 - 8412380
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  8412315 taacggagaggaccaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagt 8412380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 206 - 304
Target Start/End: Original strand, 9928392 - 9928506
Alignment:
Q  206 gttgttgatgtgtttaagattttaggatttgatgtattttttggttctgcatat----------------ttgaagttctgcatagtatgatgaagagag 289  Q
    |||||||||||||||||| |||||||||||||||| |||| |||||||||||||                ||||||||||||||||||||||||||||||    
T  9928392 gttgttgatgtgtttaagcttttaggatttgatgtgttttctggttctgcatatgatcaatgaatgtgatttgaagttctgcatagtatgatgaagagag 9928491  T
Q  290 aagatgaagaaaact 304  Q
    |||||||||||||||    
T  9928492 aagatgaagaaaact 9928506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 8411210 - 8411138
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| |||||||||||||||||||| ||||||||||| |||||||||  || |||||||||||||||| ||||    
T  8411210 aaaatattaacggagaggaccaaaatagtaaacggcataagatttataagaccaaattgagacactttatagt 8411138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 31740262 - 31740336
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  |||||| ||||||||||  |||||||||| ||||||||||||| |||||||||||||||| ||||    
T  31740262 ttaaaaaacaaacggataggaccaaaatggtaaacggcataagatttatgggaccaaattgagacactttatagt 31740336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 81 - 171
Target Start/End: Original strand, 9928122 - 9928215
Alignment:
Q  81 attgttgttgacgatttctggatttaagaaattggaggtgtggtgataatatga---gatgatgattttgttgttgattattattgataaattt 171  Q
    ||||||||||| |||||||| |||| ||||||||||||||| ||||  | | ||   ||||||||||||||||||||||||| || ||||||||    
T  9928122 attgttgttgatgatttctgaattttagaaattggaggtgtagtgacgagaagagatgatgatgattttgttgttgattattgttaataaattt 9928215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 13800389 - 13800346
Alignment:
Q  197 aaagaaggtgttgttgatgtgtttaagattttaggatttgatgt 240  Q
    ||||||||| ||||||||||||||||||||||||||||||||||    
T  13800389 aaagaaggttttgttgatgtgtttaagattttaggatttgatgt 13800346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 31738486 - 31738415
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||||||||||  |||||| |||||||| |||||||| |||||||| ||||||| ||||    
T  31738486 aaaaactaacggagaggaccaaaatggtaaaccgcagaagacttatgggaccaaattgaaacactttatagt 31738415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 33802010 - 33802081
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||| |  ||||||  ||||||||||||||||||||||| ||||||||| ||||    
T  33802010 aaaaactaacggagaggaccaatacggtaaactacagaagatttatgggatcaaattaagacactttatagt 33802081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 664 - 730
Target Start/End: Complemental strand, 12194529 - 12194463
Alignment:
Q  664 ggaaaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||||| | |||| ||||||||||||||||||||| ||  |||| |||||||||||||||||||    
T  12194529 ggaaaactttctaaaaggtcatccatcctaaaattgctccatgtcaaacatgcttaactgtggagtt 12194463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 9927728 - 9927658
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||| |||||||| ||||||||   |||| ||||||||| |||||||||||||||| ||||    
T  9927728 aaaaattaacggagatgaccaaaatagtaaacgattgaag-tttatgggaccaaattgagacactttatagt 9927658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 18139480 - 18139551
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||| |||||||||||||| | ||||||||||||||| || |||| ||| |||||||||||| ||||    
T  18139480 aaaaactaatggagaggaccaaaacaataaacggcagaagatataagggaccaatttgagacactttatagt 18139551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 293633 - 293699
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||| |||||||||||||||||  ||||||| ||||||| ||||| || |||||||| |||||||    
T  293633 aaaaataaacggagaggaccaaaatggtaaacgacagaagacttatgagaccaaattgaaacacttt 293699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 5311388 - 5311331
Alignment:
Q  408 aggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||| |||||||| || ||||||||| ||| |||||||||||||||| ||||    
T  5311388 aggaccaaaatagtaaacgacataagatttataggaccaaattgagacactttatagt 5311331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 14328767 - 14328832
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| |||||||||||||||||| |||||||| || |||| ||||| || |||||| ||||||||    
T  14328767 aaaaagtaacggagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacactt 14328832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 14421777 - 14421842
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| |||||||||||||||||| |||||||| || |||| ||||| || |||||| ||||||||    
T  14421777 aaaaagtaacggagaggaccaaaatagtaaacgacaaaagaattatgagaccaaattaagacactt 14421842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 730
Target Start/End: Original strand, 9440257 - 9440320
Alignment:
Q  667 aaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||||||||| || |||| |||||| ||||||||| |||||||||||  |||||||||| ||||    
T  9440257 aaacttcccataaggtcacccatccaaaaattgctccaaatcaagcacacttaactgtgaagtt 9440320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 8447338 - 8447273
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| |||||||||||||  ||||||| ||||  || |||| |||||||||||||||| ||||    
T  8447338 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagt 8447273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 8456142 - 8456077
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| |||||||||||||  ||||||| ||||  || |||| |||||||||||||||| ||||    
T  8456142 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagt 8456077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 9352246 - 9352197
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  9352246 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 9352197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 13492516 - 13492467
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  13492516 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 13492467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 210 - 254
Target Start/End: Complemental strand, 13800352 - 13800307
Alignment:
Q  210 ttgatgtgtttaagattttaggatttgatgta-ttttttggttctg 254  Q
    |||||||||||||||||||||||||||| ||| ||||||| |||||    
T  13800352 ttgatgtgtttaagattttaggatttgaagtatttttttgattctg 13800307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 17027493 - 17027542
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  17027493 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 17027542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 665 - 730
Target Start/End: Complemental strand, 28780310 - 28780245
Alignment:
Q  665 gaaaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||||||||||   | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  28780310 gaaaacttcccggtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 28780245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 166; Significance: 2e-88; HSPs: 46)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 166; E-Value: 2e-88
Query Start/End: Original strand, 210 - 460
Target Start/End: Original strand, 38473364 - 38473614
Alignment:
Q  210 ttgatgtgttt-aagattttaggatttgatgtattttttggttctgcatatttgaagttctgcatagtatgatgaagagagaagatgaagaaaactgtnn 308  Q
    ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||      
T  38473364 ttgatgtgttttaagattttaggatttgatgtattttttggttatgcatatttgaagttctgcatagtatgatgaagagagaagatgaagaaaattgtaa 38473463  T
Q  309 nnnnntcaagtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggaga 408  Q
         ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||  |||||||||||||||| |    
T  38473464 aaaa-tcaagtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaatgatatcaagattaatatacattaaaaaattaacggaaa 38473562  T
Q  409 ggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
     |||||||| |||||||| |||||||||||||||| |||||| |||||||||    
T  38473563 tgaccaaaatagtaaacgacagaagatttatgggaccaaattaagacacttt 38473614  T

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Target: chr5; HSP #2
Raw Score: 118; E-Value: 8e-60
Query Start/End: Original strand, 2 - 178
Target Start/End: Original strand, 38473137 - 38473316
Alignment:
Q  2 aaccgtaagtgtggatctttaaaggttctgaaagttttatttattgtagccgatgatcaaattctaagaagaaaatgacattgttgttgacgatttctgg 101  Q
    |||||||||||||||||||||||| || |||||| ||||||||||| |||| || |||||||||||||||||||| | |||||||||||| |||||||||    
T  38473137 aaccgtaagtgtggatctttaaagattttgaaagatttatttattgcagccaataatcaaattctaagaagaaaaaggcattgttgttgatgatttctgg 38473236  T
Q  102 atttaagaaattggaggtgtggtgataatatga---gatgatgattttgttgttgattattattgataaatttctatgga 178  Q
    |||||| ||||||||||||| ||||||||||||   |||||||||||||||| |||||||||||||||||||||||||||    
T  38473237 atttaaaaaattggaggtgtagtgataatatgagatgatgatgattttgttgatgattattattgataaatttctatgga 38473316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 15613629 - 15613557
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||| ||||    
T  15613629 aaaaaattaacggagaggaccaaaatagtaaacggaagaagatttatgggaccaaattgagacactttatagt 15613557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 344 - 465
Target Start/End: Original strand, 5384289 - 5384410
Alignment:
Q  344 atagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatggga 443  Q
    ||||| || ||||| | ||||| ||||||||| || |||| || |  |||||||| |||||||||||||||||| |||||||||  ||||||||||||||    
T  5384289 atagatctacaatcgaatggttgaaattatatcaaaaatattaaacattaaaaaactaacggagaggaccaaaatagtaaacggacgaagatttatggga 5384388  T
Q  444 tcaaattgagacactttgtagt 465  Q
     |||||||||||||||| ||||    
T  5384389 ccaaattgagacactttatagt 5384410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 42510237 - 42510166
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  42510237 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagt 42510166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 1273259 - 1273141
Alignment:
Q  347 gacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatca 446  Q
    ||||||||||| | ||||| |||| |||| || |||| || |  |||||||| |||||||| |||||||||  |||||| ||||||||||||||||| ||    
T  1273259 gacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggggaccaaaattgtaaactgcagaagatttatgggacca 1273160  T
Q  447 aattgagacactttgtagt 465  Q
    |||||||||| ||| ||||    
T  1273159 aattgagacattttatagt 1273141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 12830931 - 12830996
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| ||| |||||||||||||||    
T  12830931 aaaaattaacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacactt 12830996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 12862911 - 12862976
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    |||||||||||||||||||||||| ||||||| |||||||| |||| ||| |||||||||||||||    
T  12862911 aaaaattaacggagaggaccaaaatagtaaacagcagaagagttataggaccaaattgagacactt 12862976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 22812379 - 22812451
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||||| ||||||||| ||||||| |||||||||||||||||||||| ||||||| ||| ||||    
T  22812379 aaaaaactaacggaggggaccaaaatagtaaactgcagaagatttatgggatcaaagtgagacattttatagt 22812451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 1663306 - 1663239
Alignment:
Q  398 attaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||| |||||||| ||||||||||||||||||||| ||| |||||| ||||||||| ||||    
T  1663306 attaacggagaagaccaaaatagtaaacggcagaagatttataggaccaaattaagacactttatagt 1663239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 86
Target Start/End: Complemental strand, 5206672 - 5206590
Alignment:
Q  6 gtaagtgtggatctttaaaggttctgaaagttttatttattgta--gccgatgatcaaattctaagaagaaaatgacattgtt 86  Q
    ||||||||| | ||||||||||||| |||| ||||||||||| |  |||||| |||||||||||||||||||| |||||||||    
T  5206672 gtaagtgtgaacctttaaaggttctaaaagatttatttattgcacagccgataatcaaattctaagaagaaaaagacattgtt 5206590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 42979571 - 42979500
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||||||||||| |||||||||||||||| |||| ||| |||||||| ||||||| ||||    
T  42979571 aaaaatcaacggagaggaccaaaatagtaaacggcagaagaattattggaccaaattgaaacactttatagt 42979500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 15614959 - 15615024
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||||| |||||||||||||| |||||||| | |||||||||||||||| ||||    
T  15614959 taacagagaggaccaaaatagtaaacggcagaaaatttatggaaccaaattgagacactttatagt 15615024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 26404209 - 26404274
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||||| |||||| | || |||||||||||||||||||||||||||||| ||||    
T  26404209 taacggtgaggaccaaaatagtaaatgacataagatttatgggatcaaattgagacactttatagt 26404274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 10085844 - 10085904
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||||||||||||||| ||||||  ||||||||||||||||| |||||||| |||||||    
T  10085844 taacggagaggaccaaaatagtaaatagcagaagatttatgggaccaaattgaaacacttt 10085904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 42980701 - 42980773
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||| ||||||||||  ||||| |||||||||| |||| || |||||||||||||||| ||||    
T  42980701 aaaaaattaacggaaaggaccaaaatggtaaatggcagaagatatatgagaccaaattgagacactttatagt 42980773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 12933874 - 12933803
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||| |||||| |||  ||||||||||||||| ||||| ||||||||||||||||||| ||||    
T  12933874 aaaaataaacggaaaggaccgaaatggtaaacggcagaagacttatgagatcaaattgagacactttatagt 12933803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 21387760 - 21387689
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||| || |||||||||||||  ||||||||||||||||||||| |||||||||||| ||| ||||    
T  21387760 aaaaactaacagacaggaccaaaagaggtaacggcagaagatttatgggaccaaattgagacattttatagt 21387689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 5383065 - 5382999
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| |||||||||||| ||||| |||||||| |  ||||||||||||| ||||||||||||||||    
T  5383065 aaaaactaacggagaggatcaaaatagtaaacgaccaaagatttatgggaccaaattgagacacttt 5382999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 15857608 - 15857682
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||| ||||||||  ||||||| || ||||||||||||| |||||||| ||||||| ||||    
T  15857608 ttaaaaaactaacggagatgaccaaaatggtaaacgacataagatttatgggaacaaattgaaacactttatagt 15857682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 409 - 459
Target Start/End: Original strand, 22819557 - 22819607
Alignment:
Q  409 ggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||||| |||||||||||||||| |||||||| |||||||||||||||    
T  22819557 ggaccaaaatagtaaacggcagaagagttatgggaccaaattgagacactt 22819607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 19525288 - 19525352
Alignment:
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||  ||||||||||||||| ||||| || ||||| |||||||||| ||||    
T  19525288 aacggagaggaccaaaatggtaaacggcagaagacttatgtgaccaaatggagacactttatagt 19525352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 459
Target Start/End: Original strand, 24761719 - 24761779
Alignment:
Q  399 ttaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||||||||| |||||  |||||||||||| || ||||| ||||||||||||||||||    
T  24761719 ttaacggagaggaacaaaatggtaaacggcagacgagttatgagatcaaattgagacactt 24761779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 410 - 465
Target Start/End: Complemental strand, 18678083 - 18678028
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  ||||||| |||||||||||||||| |||||||||||||||| ||||    
T  18678083 gaccaaaacggtaaacgacagaagatttatgggaccaaattgagacactttatagt 18678028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 18693821 - 18693750
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||| ||||||||||||||||  |||| |||||||||||||||| || ||||||||| ||| ||||    
T  18693821 aaaaactaacagagaggaccaaaagaggtaacgacagaagatttatgggaccagattgagacattttatagt 18693750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 391 - 458
Target Start/End: Original strand, 21389133 - 21389200
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacact 458  Q
    |||||||| ||||||||||||||| |  |||||||||  ||||| |||||||| ||||||||||||||    
T  21389133 ttaaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattgagacact 21389200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Complemental strand, 26403426 - 26403359
Alignment:
Q  398 attaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||| |||||||| |||||||| || || ||||||| ||||||||||||||||||| ||||    
T  26403426 attaacagagaagaccaaaatagtaaacgacataaaatttatgagatcaaattgagacactttatagt 26403359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 18695637 - 18695711
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||| ||||| |  |||||||||  ||||| |||||||| |||||||||||||||| ||||    
T  18695637 ttaaaaaactaacggagatgaccatattagtaaacggatgaagacttatgggaccaaattgagacactttatagt 18695711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 410 - 460
Target Start/End: Original strand, 19827149 - 19827199
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||||||  |||||||| ||||||||||||||| ||||||||||||||||    
T  19827149 gaccaaaatggtaaacggaagaagatttatgggaccaaattgagacacttt 19827199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 448
Target Start/End: Original strand, 22819510 - 22819564
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaa 448  Q
    ||||| ||||||||| |||||||| |||||||||||||||| |||||||| ||||    
T  22819510 aaaaactaacggagatgaccaaaatagtaaacggcagaagagttatgggaccaaa 22819564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 452
Target Start/End: Complemental strand, 38471412 - 38471354
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattga 452  Q
    |||||||||| ||||| ||||||| ||||||||| ||||||||||||| | ||||||||    
T  38471412 aaaaattaacagagagaaccaaaatagtaaacggaagaagatttatggaaccaaattga 38471354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 189252 - 189203
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||||||||||||||||||||    
T  189252 gtcacccatcccaaaattgctccaagtcaagcatgcttaactgtggagtt 189203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 410 - 459
Target Start/End: Original strand, 2167523 - 2167572
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    |||||||| | ||||||||||||||||||||||| |||||||| ||||||    
T  2167523 gaccaaaataataaacggcagaagatttatgggaccaaattgaaacactt 2167572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 15509312 - 15509247
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||  ||||||||||||  || |||| |||||||||||||||| ||||    
T  15509312 taacggagaggaccaaaataggtaacggcagaagacataagggaccaaattgagacactttatagt 15509247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 15510262 - 15510327
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||||||||  ||||||||||||  || |||| |||||||||||||||| ||||    
T  15510262 taacagagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagt 15510327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 345 - 450
Target Start/End: Original strand, 32735423 - 32735528
Alignment:
Q  345 tagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggat 444  Q
    |||||||||||||||   ||| ||||||||| || |||| || |  |||||| | |||| |||| |||||||| | |||||||||||||| ||||||||     
T  32735423 tagacctgcaatcaaactgttgaaattatataaaaaatattagacattaaaatactaacagagatgaccaaaataataaacggcagaagagttatgggac 32735522  T
Q  445 caaatt 450  Q
    ||||||    
T  32735523 caaatt 32735528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 412 - 465
Target Start/End: Original strand, 42511677 - 42511730
Alignment:
Q  412 ccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| || |||||||||||||||||||| | |||||||||||||||| ||||    
T  42511677 ccaaaataggaaacggcagaagatttatggaagcaaattgagacactttatagt 42511730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 8762392 - 8762464
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||||||| |||| |||||||| || || ||||||| || |||||||||||| ||| ||||    
T  8762392 aaaatattaacggagaggactaaaatagtaaacgacataaaatttatgtgaccaaattgagacattttatagt 8762464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 406 - 465
Target Start/End: Original strand, 7345395 - 7345454
Alignment:
Q  406 agaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||  |||| || || |||||||||| |||||||||||||||| ||||    
T  7345395 agaggaccaaaagagataacgacaaaatatttatgggaccaaattgagacactttatagt 7345454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 440
Target Start/End: Complemental strand, 10084722 - 10084675
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatg 440  Q
    |||| |||||||||||||||||||| |||||||| || ||||||||||    
T  10084722 aaaatattaacggagaggaccaaaatagtaaacgacaaaagatttatg 10084675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 12948035 - 12947964
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||| |||||| |||  ||||||| || |||| ||||| ||||||||||||||||||| ||||    
T  12948035 aaaaataaacggaaaggaccgaaatggtaaacgacataagacttatgagatcaaattgagacactttatagt 12947964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 2194000 - 2193951
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  2194000 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 2193951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 2474143 - 2474094
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  2474143 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 2474094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 8641996 - 8642045
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| ||||| |||||||||| ||| ||||||| ||||||||||||||||    
T  8641996 gtcacccatcttaaaattgctccaagtcaagcacgcttaactgtggagtt 8642045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 22650627 - 22650692
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| |||||||||||||  ||||||| ||||  || |||| |||||||||||||||| ||||    
T  22650627 taacggataggaccaaaagaggtaacggcaaaagacataagggaccaaattgagacactttatagt 22650692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 40058141 - 40058076
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| ||||||||| ||||||||  ||||||||||||||| ||||| || ||| |||| ||||||    
T  40058141 aaaaactaacggagatgaccaaaatggtaaacggcagaagagttatgagaccaatttgaaacactt 40058076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 113; Significance: 8e-57; HSPs: 53)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 113; E-Value: 8e-57
Query Start/End: Original strand, 556 - 748
Target Start/End: Original strand, 23091341 - 23091534
Alignment:
Q  556 ccaacaataatctcgtcacatatcagactgctttcagggttgccaactgacccc-ataaactaacactagnnnnnnnagcgtgttttatcctcacttgcc 654  Q
    |||||||||||||| ||||||| || |||||||||||||||||| ||||||||| |||||||||||||||       |||||||||||||||||||||||    
T  23091341 ccaacaataatctcatcacataccaaactgctttcagggttgccgactgacccccataaactaacactagtttttttagcgtgttttatcctcacttgcc 23091440  T
Q  655 tgttgtttgggaaaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtttttgtagaataatctacc 748  Q
     ||| || |||||||||||||||||| ||| |||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||    
T  23091441 cgtttttcgggaaaacttcccaaaatatcacccatcccaaaattgctacaagtcaagcatgcttaactgtggagtttttatagaataagctacc 23091534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 33377363 - 33377428
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  33377363 taacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagt 33377428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 393 - 460
Target Start/End: Complemental strand, 33376342 - 33376275
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||||||||||||||||| |||| |||||||| |||||||||||||||| ||||||||||||||||    
T  33376342 aaaaaattaacggagaggactaaaatagtaaacgacagaagatttatgggaccaaattgagacacttt 33376275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 44304969 - 44305043
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||||| ||||||| || |||||||||| ||| |||||||||||||||||||||    
T  44304969 ttaaaaaattaacggagatgaccaaaatagtaaacagcggaagatttataggaccaaattgagacactttgtagt 44305043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 34438529 - 34438458
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||| ||||| ||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  34438529 aaaaactaacagagagaaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagt 34438458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 44302843 - 44302772
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||||||||  || ||||||| ||||||||||||||||||||||||||| ||||    
T  44302843 aaaaactaacggagaggaccaaaagaggtaatggcagaaaatttatgggatcaaattgagacactttatagt 44302772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 326 - 465
Target Start/End: Original strand, 46795951 - 46796090
Alignment:
Q  326 ggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaac 425  Q
    |||||||| ||| |||| || ||| ||||||||| |||||||||| |||| || ||   || |  |||||||| ||||||||||||||| || |||||||    
T  46795951 ggttcactattaaatacaatggacatgcaatcaaatggttaaaatcatatcaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaac 46796050  T
Q  426 ggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||  ||||| |||||||| |||||||||||||||| ||||    
T  46796051 ggaggaagacttatgggaccaaattgagacactttatagt 46796090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 323 - 465
Target Start/End: Original strand, 15787425 - 15787566
Alignment:
Q  323 gatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagta 422  Q
    ||||||||||| | | ||||||| ||||||||||| |  ||| | ||| ||||||| |||| || |  |||||||||||| ||||||||||||||  |||    
T  15787425 gatggttcactataatatactatggacctgcaatccaacggt-ataatcatattaaaaatattagacattaaaaaattaatggagaggaccaaaatggta 15787523  T
Q  423 aacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| || | |||||||| |||||||||||||||| ||||    
T  15787524 aacggcaaaaaagttatgggaccaaattgagacactttatagt 15787566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 5687292 - 5687227
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  5687292 taacggagatgaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacactttatagt 5687227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 30683020 - 30683091
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||| |||||||||| | |||||| |||||||||||||| |||||||||||||||| ||||    
T  30683020 aaaaactaacggagaagaccaaaagaattaacggccgaagatttatgggaccaaattgagacactttatagt 30683091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 339 - 465
Target Start/End: Complemental strand, 11113920 - 11113794
Alignment:
Q  339 atactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagattta 438  Q
    ||||||| ||||||||||| |  ||||| ||||||||||| |||| || |  |  ||||| ||||||| | ||||||||  ||||||||||||||| |||    
T  11113920 atactatggacctgcaatcgaacggttataattatattaaaaatattagacatctaaaaactaacggaaatgaccaaaatggtaaacggcagaagagtta 11113821  T
Q  439 tgggatcaaattgagacactttgtagt 465  Q
    || || |||||||||||||||| ||||    
T  11113820 tgagaccaaattgagacactttatagt 11113794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 15446663 - 15446729
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| |||||||||||||||||| ||||||||| |||| |||||||||| |||||||| |||||||    
T  15446663 aaaaactaacggagaggaccaaaatagtaaacggtagaaaatttatgggaccaaattgaaacacttt 15446729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 400 - 454
Target Start/End: Complemental strand, 26788639 - 26788585
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgaga 454  Q
    |||||||||||||||||| |||||||||||||||||||||||||  |||||||||    
T  26788639 taacggagaggaccaaaatagtaaacggcagaagatttatgggacgaaattgaga 26788585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 34439654 - 34439724
Alignment:
Q  395 aaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||| |||||||| ||||||||||||||||||||||||| |||||||| ||| ||| ||||    
T  34439654 aaaactaacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgaaacattttatagt 34439724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 394 - 454
Target Start/End: Complemental strand, 86926 - 86866
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgaga 454  Q
    ||||| ||||||||| |||||||| |||||||||||||| |||||||||| ||||||||||    
T  86926 aaaaactaacggagaagaccaaaacagtaaacggcagaatatttatgggaccaaattgaga 86866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 11094649 - 11094578
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||| |||||||||||| |||||||||||||| |||||| ||| |||||| ||||||||| ||||    
T  11094649 aaaaactaacgaagaggaccaaaacagtaaacggcagaaaatttataggaccaaattaagacactttatagt 11094578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 35787919 - 35787848
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||||||||||  ||||||| |||||||||||||||| |||||||| ||| ||| ||||    
T  35787919 aaaaactaacggagaggaccaaaacggtaaacgacagaagatttatgggaccaaattgaaacattttatagt 35787848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 28103476 - 28103550
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  |||||| ||||||||||  ||||||||||||||  |||||||| |||||||||||||||| ||||    
T  28103476 ttaaaaaacaaacggaaaggaccaaaatggtaaacggcagaagtcttatgggaccaaattgagacactttatagt 28103550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 1273432 - 1273497
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| || ||||| || |||| |||||||| |||||||||||||||| ||||    
T  1273432 taacggagaggaccaaaatagcaaacgacataagacttatgggaccaaattgagacactttatagt 1273497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 5688636 - 5688701
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| |||||||| || ||||||||||| | |||||||||||||||| ||||    
T  5688636 taacggagatgaccaaaatagtaaacgacataagatttatggaaccaaattgagacactttatagt 5688701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 344 - 465
Target Start/End: Complemental strand, 27408936 - 27408815
Alignment:
Q  344 atagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatggga 443  Q
    |||||||||||||| | ||||  |||  ||||||| |||| || || ||||||||   |||||   ||||||||  |||||||| |||||||||||||||    
T  27408936 atagacctgcaatcgaatggtcgaaaacatattaaaaatattagatattaaaaaacacacggacgtgaccaaaatggtaaacggaagaagatttatggga 27408837  T
Q  444 tcaaattgagacactttgtagt 465  Q
     |||||||||||||||| ||||    
T  27408836 ccaaattgagacactttatagt 27408815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 37560298 - 37560363
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||| | |||||||| |  ||||||||||||| |||||||||||||||| ||||    
T  37560298 taacggagaggaccaagatagtaaacgtcgtaagatttatgggaccaaattgagacactttatagt 37560363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 318 - 459
Target Start/End: Complemental strand, 38417752 - 38417611
Alignment:
Q  318 gtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaa 417  Q
    |||||||||| ||| | ||  |||| || |||||||||||||  |||| |||| ||||||| ||   || |  |||||| | |||||||||||||| |||    
T  38417752 gtgttgatgggtcagtgttgtatacaatggacctgcaatcaaacggttgaaatcatattaaaaaatctaaacattaaaatactaacggagaggaccgaaa 38417653  T
Q  418 gagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
     |||||||| || ||||||||||||| |||||||| ||||||    
T  38417652 tagtaaacgacataagatttatgggaccaaattgacacactt 38417611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 44128333 - 44128398
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||||||| ||||||||  |||  ||||||||||||||| ||||    
T  44128333 taacggagaggaccaaaatagtaaacggcataagatttaaaggactaaattgagacactttatagt 44128398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 55953851 - 55953916
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||||| ||||||||||| |||||||| |||| |||||||||||| ||| ||||    
T  55953851 taacggggaggaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagt 55953916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 11114973 - 11115044
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||| ||||||  ||||||| ||||||| |||||||| |||||||||| ||||| ||||    
T  11114973 aaaaactaacggagaggtccaaaatggtaaacgacagaagagttatgggaccaaattgagatactttatagt 11115044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 664 - 735
Target Start/End: Complemental strand, 13266287 - 13266216
Alignment:
Q  664 ggaaaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtttttgt 735  Q
    |||||||||||||||| |||| ||||||||||||| ||  || ||||||| |||||||||||| ||| ||||    
T  13266287 ggaaaacttcccaaaaggtcacccatcctaaaatttctcaaagtcaagcacgcttaactgtggggttcttgt 13266216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 17319165 - 17319094
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||| || |||||||| |||||||| |||||||||||||| | |||||||| ||||||| ||||    
T  17319165 aaaaactaacggtgaagaccaaaatagtaaacgccagaagatttatggaaccaaattgaaacactttatagt 17319094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 326 - 465
Target Start/End: Complemental strand, 47667369 - 47667230
Alignment:
Q  326 ggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaac 425  Q
    |||||||| |||||||| || ||| ||||||||| |||||||||| | || || ||   || |  |||||||| ||||| ||||||||| |  |||||||    
T  47667369 ggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggaccatattagtaaac 47667270  T
Q  426 ggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||  ||||| ||||| || |||||||||||||||| ||||    
T  47667269 ggaggaagacttatgagaccaaattgagacactttatagt 47667230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 307795 - 307869
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  |||||||| ||||| || |||||| ||  ||||| ||||||||||||||||||||||||| ||||    
T  307795 ttaaaaaaccaacggagatgaccacaatagtaaatggaggaagacttatgggatcaaattgagacactttatagt 307869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 31712499 - 31712565
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||| |||||| | ||||||||  |||||||| |||||| ||||||||||||||||| |||||||    
T  31712499 aaaaataaacggaaatgaccaaaatggtaaacggaagaagacttatgggatcaaattgaaacacttt 31712565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 27410686 - 27410746
Alignment:
Q  404 ggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||  |||||||| ||||||||||| ||| |||||||||||||||| ||||    
T  27410686 ggagaggaccaaaatggtaaacggaagaagatttat-ggaccaaattgagacactttatagt 27410746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 38419010 - 38419075
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| ||||||||| ||| |||| |||||||||||||||| ||||| || |||||||| ||||||    
T  38419010 aaaaactaacggagatgactaaaacagtaaacggcagaagacttatgagaccaaattgacacactt 38419075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 44471281 - 44471330
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||||||||||| ||||||||||||||||    
T  44471281 gtcacccatcccaaaattgctccaaatcaagcacgcttaactgtggagtt 44471330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 50814781 - 50814830
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  50814781 gtcatccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 50814830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 53400302 - 53400237
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||| ||||  ||||||| || ||||||||| ||| |||||||||||||||| ||||    
T  53400302 taacggagaggactaaaatggtaaacgacataagatttataggaccaaattgagacactttatagt 53400237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 3217608 - 3217668
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||||| |||||||||| |||||||  ||||||||||||| ||||||||| | |||||||    
T  3217608 taacggataggaccaaaatagtaaacaacagaagatttatgagatcaaattaaaacacttt 3217668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 373 - 465
Target Start/End: Complemental strand, 29686400 - 29686308
Alignment:
Q  373 tattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||| |||| || ||||||||||||||||||||||||||||  |||| || ||||  || |||| ||| |||||||| ||| ||||    
T  29686400 tattaaaaatattataattaaaaaaattaacggagaggaccaaaagaggtaacgacataagacataagggaccaatttgagacaatttatagt 29686308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 40146615 - 40146687
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||| ||||| |  ||||| ||| |||||| |||||||| |||||||||||||||| ||||    
T  40146615 aaaaaactaacggagatgaccacattagtaatcggaagaagacttatgggaccaaattgagacactttatagt 40146687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 730
Target Start/End: Original strand, 12691941 - 12692004
Alignment:
Q  667 aaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||||||  | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  12691941 aaacttcccagtaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 12692004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 15787075 - 15787004
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| || ||   |||||||||||| | |||||||| |||||||||||| ||| ||||    
T  15787075 aaaaattaacggagaggatcataatgataaacggcagaaaagttatgggaccaaattgagacagtttatagt 15787004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 39592282 - 39592353
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||| ||||||| |||||||| |||||||  ||  ||| ||| |||||||||||| ||||    
T  39592282 aaaaattaacggagagaaccaaaacagtaaacgacagaagacataatggaccaatttgagacactttatagt 39592353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 47668590 - 47668661
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||| ||||||||||||| | ||||||||||| ||| || |||| ||| |||||||||||| ||||    
T  47668590 aaaaactaacagagaggaccaaaacaataaacggcagatgatataagggaccaatttgagacactttatagt 47668661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 621
Target Start/End: Original strand, 24629291 - 24629333
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacac 621  Q
    ||||||||||||||| ||||| |||||||||| ||||||||||    
T  24629291 cagactgctttcaggattgccgactgaccccacaaactaacac 24629333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 345 - 459
Target Start/End: Original strand, 50531700 - 50531814
Alignment:
Q  345 tagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggat 444  Q
    |||||||||||||||  |||| ||||||||| || |||| || |  ||| || | |||| || | ||| |||| |||||||| || |||| ||||||||     
T  50531700 tagacctgcaatcaaacggttgaaattatataaaaaatattagacattagaatactaacagaaatgactaaaatagtaaacgacaaaagagttatgggac 50531799  T
Q  445 caaattgagacactt 459  Q
    |||||||||||||||    
T  50531800 caaattgagacactt 50531814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 392 - 465
Target Start/End: Original strand, 10403408 - 10403481
Alignment:
Q  392 taaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||| ||||||||| ||| | |||||| | ||||||||||| || |||||||| ||||||| ||||    
T  10403408 taaaatattaaccgagaggaccgaaataataaacgactgaagatttatgagaccaaattgatacactttatagt 10403481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 24628933 - 24628982
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  24628933 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 24628982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 465
Target Start/End: Original strand, 26393146 - 26393191
Alignment:
Q  420 gtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| ||||||| |||||||| |||||||||||||||| ||||    
T  26393146 gtaaacgacagaagagttatgggaccaaattgagacactttatagt 26393191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 420 - 465
Target Start/End: Complemental strand, 29663739 - 29663694
Alignment:
Q  420 gtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||| |||||||| |||||||||||| ||| ||||    
T  29663739 gtaaacggcagaagagttatgggaccaaattgagacaatttatagt 29663694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 35871811 - 35871762
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  35871811 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 35871762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 37559115 - 37559050
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| |||||||||   ||| ||||||||| |||||||||||| ||| ||||    
T  37559115 taacggagatgaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagt 37559050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 44159208 - 44159143
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| ||||||||| |||||||| | |||||||||||||| || ||| | |||||||| ||||||    
T  44159208 aaaaactaacggagatgaccaaaataataaacggcagaagagttgtggaaccaaattgaaacactt 44159143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 44470831 - 44470880
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  44470831 gtcaaccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 44470880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 84; Significance: 2e-39; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 84; E-Value: 2e-39
Query Start/End: Original strand, 279 - 452
Target Start/End: Original strand, 14171148 - 14171319
Alignment:
Q  279 gatgaagagagaagatgaagaaaactgtnnnnnnntcaagtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaa 378  Q
    ||||||||||||||||||||||||||||       |||||||| ||||||||||||||| ||| |||||||||||||||||||||||||||| |||| ||    
T  14171148 gatgaagagagaagatgaagaaaactgttaaaa--tcaagtgtggatggttcactcttatatattatagacctgcaatcaagtggttaaaataatatcaa 14171245  T
Q  379 gaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattga 452  Q
    ||||||||||  |||||||||||| ||| | || ||||| |||||| | |||| ||||||||||| ||||||||    
T  14171246 gaataatatacattaaaaaattaaaggaaatgatcaaaatagtaaatgacagatgatttatgggaccaaattga 14171319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 13641381 - 13641309
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  13641381 aaaaaaataacggagatgaccaaaatagtaaacggcagaagatttatgggaccaaattgagacactttatagt 13641309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 8e-20
Query Start/End: Original strand, 399 - 465
Target Start/End: Complemental strand, 3978162 - 3978096
Alignment:
Q  399 ttaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||| ||||    
T  3978162 ttaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactttatagt 3978096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 3979312 - 3979377
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||||||||||||| |||||||| |||||||||||||||| ||||    
T  3979312 taacggagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacactttatagt 3979377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 465
Target Start/End: Original strand, 36511325 - 36511395
Alignment:
Q  395 aaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||| |||||||| |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  36511325 aaaactaacggagatgaccaaaatagtaaacgacagaagatttatgggaccaaattgagacactttatagt 36511395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 26056146 - 26056211
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||||| || ||||||||||||| |||||||||||||||| ||||    
T  26056146 taacggagaggaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacactttatagt 26056211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 47560263 - 47560191
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||| |||||||| |||||||||||||| |||||  |||||||||||| ||||||| ||||    
T  47560263 aaaaaattaacggagatgaccaaaacagtaaacggcagaatatttaaaggatcaaattgaaacactttatagt 47560191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 19466198 - 19466269
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||| |||| || |||||||| |||||||||||||||| |||||||||||||||| ||||    
T  19466198 aaaaactaacggagagaaccacaatagtaaacgacagaagatttatgggaccaaattgagacactttatagt 19466269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 21277117 - 21277046
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||| |||||||| ||||| ||||||||||||||||||||||||| |||||||||| ||||| ||||    
T  21277117 aaaaactaatggagaggatcaaaatagtaaacggcagaagatttatgggaccaaattgagatactttatagt 21277046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 36509934 - 36509863
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||| ||||||| ||||||||||||||||||||||| | |||||||| ||||||| ||||    
T  36509934 aaaaactaacggagagaaccaaaatagtaaacggcagaagatttatggaaccaaattgaaacactttatagt 36509863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 9592364 - 9592290
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||| | || ||||| |||||||| || |||||||||||||||||||||| ||||||| ||||    
T  9592364 ttaaaaaattaacggaaatgatcaaaatagtaaacgacaaaagatttatgggatcaaattgaaacactttatagt 9592290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 25787163 - 25787228
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||| |||| |||||||||| || |||||||||||||||| ||||    
T  25787163 taacggagaggaccaaaatagtaaatggcataagatttatgagaccaaattgagacactttatagt 25787228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 47136686 - 47136751
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||||||| ||||||||||  | |||||||||||||||| ||||    
T  47136686 taacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagt 47136751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 47411447 - 47411512
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||| | ||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  47411447 taacggagagaatcaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagt 47411512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 322 - 465
Target Start/End: Complemental strand, 26055092 - 26054949
Alignment:
Q  322 tgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagt 421  Q
    |||||||||||| ||  |||  |||||||||||||| | ||||| ||||||||| |  |||| |  |  |||||||| ||||| ||  |||||||| |||    
T  26055092 tgatggttcactattgtatataatagacctgcaatctaatggttgaaattatatcataaatatttgacattaaaaaactaacgaaggagaccaaaatagt 26054993  T
Q  422 aaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||| | |||||||| ||||||| ||||    
T  26054992 aaacgacagaagatttatggaaccaaattgaaacactttatagt 26054949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 51726837 - 51726908
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||| |||||| |||| |||||||| |||||||||||||| | |||||||||||||||| ||||    
T  51726837 aaaaactaacggtgaggactaaaatagtaaacgacagaagatttatggaaccaaattgagacactttatagt 51726908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 40811318 - 40811256
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    ||||| ||||||||| |||||||| | ||||||||| |||| |||||||||||||||||||||    
T  40811318 aaaaactaacggagatgaccaaaataataaacggcaaaagagttatgggatcaaattgagaca 40811256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 49139927 - 49139853
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| |||||||||  ||||||| ||||||| || ||||||||||| || |||||||||||||||| ||||    
T  49139927 ttaaaaaactaacggagattaccaaaatagtaaactgcggaagatttatgagaccaaattgagacactttatagt 49139853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 50679811 - 50679885
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||||||||| |  |||||||||  ||||| |||||||| |||||||||||||||| ||||    
T  50679811 ttaaaaaactaacggagaggaccatattagtaaacggaggaagacttatgggaccaaattgagacactttatagt 50679885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 22167902 - 22167837
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| |||| ||||| ||||||| | ||||||||||||||||||||||| |||||||| ||||||    
T  22167902 aaaaactaacagagagaaccaaaataataaacggcagaagatttatgggaccaaattgaaacactt 22167837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 25786085 - 25786020
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||||| | |||||| || ||||||||||||| |||||||||||||||| ||||    
T  25786085 taacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacactttatagt 25786020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 35683172 - 35683107
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||  ||||||||||||  || |||| |||||||||||||||| ||||    
T  35683172 taacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagt 35683107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 47411101 - 47411036
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| |||||||| || |||||||||| || |||||||||||||||| ||||    
T  47411101 taacggagatgaccaaaatagtaaacgacataagatttatgagaccaaattgagacactttatagt 47411036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 14071203 - 14071267
Alignment:
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||||  ||||||| ||||||| |||||||| |||||||||||||||| ||||    
T  14071203 aacggaaaggaccaaaatggtaaacgacagaagacttatgggaccaaattgagacactttatagt 14071267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 13929421 - 13929347
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||| |||||||| |   ||||||| |||||||||| |||| |||||||||||||||| ||||    
T  13929421 ttaaaaaataaacggacaggaccaagatgataaacggaagaagatttacgggaccaaattgagacactttatagt 13929347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 51725469 - 51725395
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||| | ||||||||   ||||||||||||  ||||| |||||||||||||||||||| ||||    
T  51725469 ttaaaaaataaacggacatgaccaaaatgataaacggcagaaattttataggatcaaattgagacactttatagt 51725395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 2237977 - 2238042
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||  |||| |||||||  || |||| |||||||||||||||| ||||    
T  2237977 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagt 2238042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 14390375 - 14390310
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||||  |||||||  ||||||||||||| | |||||||||||| ||| ||||    
T  14390375 taacggagaggaccaaaatggtaaacgaaagaagatttatggaaccaaattgagacattttatagt 14390310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 16217557 - 16217492
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| |||||| | || ||||||||| ||| |||||||||||||||| ||||    
T  16217557 taacggagatgaccaaaatagtaaatgacataagatttataggaccaaattgagacactttatagt 16217492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 16218477 - 16218542
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| | |||||| || ||||||||||||| |||||||||| ||||| ||||    
T  16218477 taacggagatgaccaaaatattaaacgacataagatttatgggaccaaattgagatactttatagt 16218542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 48935109 - 48935174
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||||||  ||||||||||||  || |||| |||||||||||||||| ||||    
T  48935109 taacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagt 48935174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 325 - 465
Target Start/End: Complemental strand, 52741681 - 52741540
Alignment:
Q  325 tggttcactcttagatactatagacctg-caatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaa 423  Q
    ||||||||| | | ||||||| |||||  |||||||  ||||| ||| ||||||| |||| || |  |||||||| ||| |||||||||||||| | |||    
T  52741681 tggttcactataatatactatggacctaacaatcaaacggttataatcatattaaaaatactagaagttaaaaaactaatggagaggaccaaaacaataa 52741582  T
Q  424 acggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    | | |||||||  || |||||||| |||||||||||| ||||    
T  52741581 atgacagaagacataagggatcaatttgagacactttatagt 52741540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 13930675 - 13930739
Alignment:
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||||  ||||||| || |||| |||||||| |||||||||||||||| ||||    
T  13930675 aacggaaaggaccaaaatggtaaacgacataagacttatgggaccaaattgagacactttatagt 13930739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 404 - 460
Target Start/End: Complemental strand, 19464713 - 19464657
Alignment:
Q  404 ggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| |||||||| ||||||||||||||||||| ||| | |||||||| |||||||    
T  19464713 ggagatgaccaaaatagtaaacggcagaagatttgtggaaccaaattgaaacacttt 19464657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 52181297 - 52181369
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||| |||||||| |||||||  || |||||||||| ||  ||||||||||||||| ||||    
T  52181297 aaaatattaacggagatgaccaaaatagtaaacaacataagatttatgagactaaattgagacactttatagt 52181369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 465
Target Start/End: Complemental strand, 14169726 - 14169671
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| |||||||| || ||||||||||||| |||||||||||| ||| ||||    
T  14169726 gaccaaaatagtaaacgacaaaagatttatgggaccaaattgagacattttatagt 14169671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Original strand, 14765093 - 14765152
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    |||||||||||||| ||| ||||||| ||| || |||||||||| |||||||| ||||||    
T  14765093 taacggagaggaccgaaatagtaaactgcaaaaaatttatgggaccaaattgacacactt 14765152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 675 - 729
Target Start/End: Complemental strand, 8278147 - 8278093
Alignment:
Q  675 caaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagt 729  Q
    ||||| |||| |||||| ||||||||| ||| ||||||| |||||||||||||||    
T  8278147 caaaaggtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagt 8278093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 20054397 - 20054547
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |    |||||| ||||||       
T  20054397 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa-cttcccggt 20054495  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  20054496 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 20054547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 20054853 - 20055003
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |    |||||| ||||||       
T  20054853 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa-cttcccggt 20054951  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  20054952 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 20055003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 20055309 - 20055459
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |    |||||| ||||||       
T  20055309 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa-cttcccggt 20055407  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  20055408 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 20055459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 20055765 - 20055915
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |    |||||| ||||||       
T  20055765 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa-cttcccggt 20055863  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  20055864 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 20055915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 20056221 - 20056371
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |    |||||| ||||||       
T  20056221 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa-cttcccggt 20056319  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  20056320 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 20056371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 20057124 - 20057274
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |    |||||| ||||||       
T  20057124 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa-cttcccggt 20057222  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  20057223 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 20057274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 730
Target Start/End: Original strand, 20057580 - 20057730
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |    |||||| ||||||       
T  20057580 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttaccgggaaa-cttcccggt 20057678  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  20057679 aggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 20057730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 579 - 621
Target Start/End: Complemental strand, 38341191 - 38341149
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacac 621  Q
    ||||||||||||||| ||||| ||||||||||||||| |||||    
T  38341191 cagactgctttcaggattgccgactgaccccataaaccaacac 38341149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 2236930 - 2236865
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||| ||||||||  |||| |||||||  || |||| |||||||||||||||| ||||    
T  2236930 taacggagaggatcaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagt 2236865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 16451895 - 16451944
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  16451895 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 16451944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 16461048 - 16461097
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  16461048 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 16461097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 42248304 - 42248369
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||| ||||  ||||||| || ||||||||| ||| |||||||||||||||| ||||    
T  42248304 taacgaagaggactaaaatggtaaacgacataagatttataggaccaaattgagacactttatagt 42248369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 46693697 - 46693746
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  46693697 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 46693746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 48973315 - 48973250
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| |||||| |||||||||  |||| |||||||  || ||||||||||||||||||||| ||||    
T  48973315 taacagagagggccaaaagaggtaacgacagaagacataagggatcaaattgagacactttatagt 48973250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 52250727 - 52250678
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  52250727 gtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagtt 52250678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 52251064 - 52251015
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  52251064 gtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagtt 52251015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 2e-32; HSPs: 33)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 263 - 452
Target Start/End: Complemental strand, 25570021 - 25569834
Alignment:
Q  263 aagttctgcatagtatgatgaagagagaagatgaagaaaactgtnnnnnnntcaagtgttgatggttcactcttagatactatagacctgcaatcaagtg 362  Q
    ||||||||  |||||||||||||||||||||||||||||||| |       ||||||| |||||||||||||||| ||||||||||| ||||||||||||    
T  25570021 aagttctgtgtagtatgatgaagagagaagatgaagaaaactataaaaa--tcaagtgctgatggttcactcttaaatactatagacatgcaatcaagtg 25569924  T
Q  363 gttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattga 452  Q
    |||||||| |||| ||||||||||||  |||||||| ||||  | |  ||||||| | |||||||  ||||| ||||| || ||||||||    
T  25569923 gttaaaatgatatcaagaataatatacattaaaaaactaacataaaaaaccaaaacaataaacggaggaagacttatgtgaccaaattga 25569834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 23177797 - 23177726
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||    
T  23177797 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagt 23177726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 23589054 - 23588983
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||| |||||||||||||||| ||||    
T  23589054 aaaaactaacggagaggaccaaaatggtaaacggcagaagatttatgggaccaaattgagacactttatagt 23588983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 6707052 - 6706978
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| |||||||| ||||||||| ||||||||| ||||||||||||| | |||||||||||||||| ||||    
T  6707052 ttaaaaaactaacggaggggaccaaaatagtaaacggaagaagatttatggaaccaaattgagacactttatagt 6706978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 1624968 - 1625040
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||| |||||||| |||||| |||| ||||||||| ||| |||||||||||||||| ||||    
T  1624968 aaaaaattaacggagaagaccaaaatagtaaatggcataagatttataggaccaaattgagacactttatagt 1625040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 14509332 - 14509261
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||||| |||||||| |||||||||||||||| | |||| | ||||||| ||||    
T  14509332 aaaaattaacggagaggaccaaaatagtaaacgacagaagatttatgggaccgaattaaaacactttatagt 14509261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 197 - 240
Target Start/End: Complemental strand, 25570127 - 25570084
Alignment:
Q  197 aaagaaggtgttgttgatgtgtttaagattttaggatttgatgt 240  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  25570127 aaagaaggtgttgttgatgtgtttaagattttaggatttgatgt 25570084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 2581920 - 2581855
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||| | ||||||||||  ||||||||||||| |||||||||||||||| ||||    
T  2581920 taacggagaggaccaagatagtaaacggcgtaagatttatgggaccaaattgagacactttatagt 2581855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 12853003 - 12852938
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| ||||||||  ||||||||||||||| |||||||||||||||| ||||    
T  12853003 taacggagatgaccaaaatagtaaacgatagaagatttatgggaccaaattgagacactttatagt 12852938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 391 - 458
Target Start/End: Original strand, 40174754 - 40174821
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacact 458  Q
    |||||||| ||||||||| |||||||| |||||||  |||||||||||||||| |||||||| |||||    
T  40174754 ttaaaaaactaacggagatgaccaaaatagtaaacaacagaagatttatgggaccaaattgaaacact 40174821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 2305657 - 2305592
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||  ||||||||||||  || |||| |||||||||||||||| ||||    
T  2305657 taacggagaggaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagt 2305592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 4829582 - 4829517
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||||| |||||||| || |||||||||| ||||||||||||||| ||| ||||    
T  4829582 taacagagaggaccaaaatagtaaacgacataagatttatgagatcaaattgagacattttatagt 4829517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 42027310 - 42027245
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| |||||||||  ||||||| |||||| |||||||||| |||||||||||| ||||||||    
T  42027310 taacggaaaggaccaaagtagtaaacagcagaaaatttatgggaccaaattgagacattttgtagt 42027245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 35801037 - 35801109
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||||||||||   ||||| ||||||||| ||| |||| |||||||| ||||||| ||||    
T  35801037 aaaaaattaacggagaggaccaaagtggtaaatggcagaagagttaggggaccaaattgaaacactttatagt 35801109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 7037089 - 7037018
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||| | ||||||||  ||||||||||||||| |||||||| |||||||| ||||||| ||||    
T  7037089 aaaaataaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgaaacactttatagt 7037018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 460
Target Start/End: Original strand, 12959705 - 12959764
Alignment:
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||||||||| |||||  |||||||||||||||||||| |||  |||||||||||||||    
T  12959705 aacggagaggatcaaaaaggtaaacggcagaagatttatcggactaaattgagacacttt 12959764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 393 - 460
Target Start/End: Complemental strand, 42246715 - 42246648
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||| ||||| | |||||||||| ||||||||| | |||| ||||||||||||||||| |||||||    
T  42246715 aaaaaactaacgaaaaggaccaaaatagtaaacggtaaaagagttatgggatcaaattgaaacacttt 42246648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 664 - 730
Target Start/End: Complemental strand, 8256727 - 8256661
Alignment:
Q  664 ggaaaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||||||||||||  | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  8256727 ggaaaacttcccagcaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 8256661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 10368375 - 10368449
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  |||||| | ||||||||   ||||||| |||| ||||||||||||||||||||||||||| ||||    
T  10368375 ttaaaaaacaaacggacatgaccaaaatgataaacggaagaaaatttatgggatcaaattgagacactttatagt 10368449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 33771185 - 33771136
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||||||||||||||||||||    
T  33771185 gtcacccatcccaaaattgctccaagtcaagcatgcttaactgtggagtt 33771136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 41754473 - 41754424
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  41754473 gtcatccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 41754424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 2306660 - 2306720
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||||||||||||||||||  ||||||||||||  ||  ||| ||||||||||||||||    
T  2306660 taacggagaggaccaaaagaggtaacggcagaagacataatggaccaaattgagacacttt 2306720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 459
Target Start/End: Original strand, 14510507 - 14510567
Alignment:
Q  399 ttaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    |||||| ||| ||| |||| |||||||||||||||| |||| ||| |||||||||||||||    
T  14510507 ttaacgaagatgactaaaatagtaaacggcagaagagttataggaccaaattgagacactt 14510567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 411 - 465
Target Start/End: Complemental strand, 11386730 - 11386676
Alignment:
Q  411 accaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||  |||||||| ||||| |||||||||||||||||| ||||||| ||||    
T  11386730 accaaaatggtaaacggtagaaggtttatgggatcaaattgaaacactttatagt 11386676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 427 - 465
Target Start/End: Original strand, 12854130 - 12854168
Alignment:
Q  427 gcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||| |||||||||||||||| ||||    
T  12854130 gcagaagatttatgggaccaaattgagacactttatagt 12854168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 210 - 248
Target Start/End: Complemental strand, 25570090 - 25570052
Alignment:
Q  210 ttgatgtgtttaagattttaggatttgatgtattttttg 248  Q
    |||||||||||||||||||| |||||||||| |||||||    
T  25570090 ttgatgtgtttaagattttaagatttgatgtgttttttg 25570052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 28109862 - 28109928
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| ||||||||||||||||||  ||||||  ||||| | |||||||| |||||||||| |||||    
T  28109862 aaaaaataacggagaggaccaaaatggtaaactacagaaaagttatgggaccaaattgagatacttt 28109928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 688 - 730
Target Start/End: Original strand, 32377685 - 32377727
Alignment:
Q  688 atcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| ||||||||| ||| ||||||||||||||||||||||||    
T  32377685 atcccaaaattgctccaagtcaagcatgcttaactgtggagtt 32377727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 11388371 - 11388322
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  11388371 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 11388322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 15650558 - 15650493
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| |||||||| || |||||||| |  | |||||||||||||||| ||||    
T  15650558 taacggagatgaccaaaatagtaaacgacataagatttaagataccaaattgagacactttatagt 15650493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 25337959 - 25338008
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  25337959 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 25338008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 29424611 - 29424676
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||||| | |||||||||||| ||| | |||| |||||||| ||||||| ||||    
T  29424611 taacagagaggaccaaaacaataaacggcagaatattcaagggaccaaattgaaacactttatagt 29424676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 35799629 - 35799564
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||   |||||||| |||| | ||||| || |||||||||||||||| ||||    
T  35799629 taacggagaggaccaaagaggtaaacggaagaaaagttatgagaccaaattgagacactttatagt 35799564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 37275013 - 37274939
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| ||||    
T  37275013 ttaaaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaacaaattgagacactttatagt 37274939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 319 - 465
Target Start/End: Original strand, 36939951 - 36940097
Alignment:
Q  319 tgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaag 418  Q
    ||||| ||||||||| ||| |||| || ||||||||||| | ||||| |||  |||| || | || || || |||||||||||||||||| ||||||||     
T  36939951 tgttggtggttcactattatatacaatggacctgcaatcgaatggttgaaaccatatcaaaattattagatattaaaaaattaacggagatgaccaaaat 36940050  T
Q  419 agtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||||||||  | |||||||| ||||||| ||||    
T  36940051 agtaaacggcagaagatttatgataccaaattgaaacactttatagt 36940097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 36070295 - 36070230
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||    
T  36070295 taacggggaggaccaaaatagtaaacggcagaagatttatgggatcaaattgagacactttatagt 36070230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 31625383 - 31625443
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| ||||||||||||||||    
T  31625383 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaattgagacacttt 31625443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 13367043 - 13367114
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||||||| |||||| | ||||||| ||||    
T  13367043 aaaaactaacggagaggaccaaaatagtaaacggcagaagatttatgggaccaaattaaaacactttatagt 13367114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 16363811 - 16363876
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||| ||||| |||||||||||||||||||||| ||||| ||||    
T  16363811 taacggagaggaccaaaatagtaaacagcagacgatttatgggatcaaattgagatactttatagt 16363876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 404 - 465
Target Start/End: Original strand, 38591010 - 38591071
Alignment:
Q  404 ggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  38591010 ggagaggaccaaaatagtaaacggcataagatttatgggaccaaattgagacactttatagt 38591071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 394 - 452
Target Start/End: Complemental strand, 117171 - 117113
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattga 452  Q
    ||||| |||||||||||||||||| | |||||| |||||||||||||||||||||||||    
T  117171 aaaaactaacggagaggaccaaaacaataaacgacagaagatttatgggatcaaattga 117113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 24068456 - 24068382
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| |||||||||||||||||  |||||||||  ||||| |||||||| |||||||||||||||| ||||    
T  24068456 ttaaaaaactaacggagaggaccaaattagtaaacggaggaagacttatgggaccaaattgagacactttatagt 24068382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 348 - 465
Target Start/End: Original strand, 10053691 - 10053808
Alignment:
Q  348 acctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaa 447  Q
    ||||||||||||  ||||| ||| ||||||| |||| |||| || ||||||||||||||||| ||||||||||  |||| || ||||  || |||| |||    
T  10053691 acctgcaatcaaacggttataatcatattaaaaatattataattaaaaaaattaacggagagaaccaaaagaggtaacgacataagacataagggaccaa 10053790  T
Q  448 attgagacactttgtagt 465  Q
     |||||||||||| ||||    
T  10053791 cttgagacactttatagt 10053808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 339 - 455
Target Start/End: Complemental strand, 39323965 - 39323849
Alignment:
Q  339 atactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagattta 438  Q
    |||| |||||| ||||||| | ||||||||||||||| || |||| || || || ||||| |||||||||||||||||||||  ||||| ||||||  ||    
T  39323965 atacaatagacatgcaatctaatggttaaaattatatcaaaaatattagatcttgaaaaactaacggagaggaccaaaagaggtaacggaagaagacata 39323866  T
Q  439 tgggatcaaattgagac 455  Q
     | |||||| |||||||    
T  39323865 agagatcaatttgagac 39323849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 7486200 - 7486129
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||||| ||||||| ||| ||||||||||||| ||||||||  |||||| ||||    
T  7486200 aaaaactaacggagaggaccaaaatagtaaacagcaaaagatttatgggaccaaattgaagcactttatagt 7486129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 402 - 465
Target Start/End: Original strand, 24069447 - 24069510
Alignment:
Q  402 acggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||  ||||||||||||||| |||||||| |||||||||||||||| ||||    
T  24069447 acggaaaggaccaaaatggtaaacggcagaagagttatgggaccaaattgagacactttatagt 24069510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 37276236 - 37276307
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||| ||||||||||| | | ||||||||| ||||||||||||| |||||||||||||||| ||||    
T  37276236 aaaaactaacagagaggaccaatataataaacggcaaaagatttatgggaccaaattgagacactttatagt 37276307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 582 - 733
Target Start/End: Original strand, 22548859 - 22549009
Alignment:
Q  582 actgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaaatg 681  Q
    |||||||||||| ||||| |||||||||| |||| ||||| ||       ||||||||||||||||||| ||  | |   ||||||| ||||||   | |    
T  22548859 actgctttcaggattgccgactgaccccacaaaccaacacgagtctgttcagcgtgttttatcctcactcgcacgcttactgggaaa-cttcccggtagg 22548957  T
Q  682 tcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagttttt 733  Q
    ||| |||||| ||||||||| ||| ||||||| |||||||||||||||||||    
T  22548958 tcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagttttt 22549009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 456
Target Start/End: Complemental strand, 35944031 - 35943969
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    ||||| ||||||||| |||||||| ||||||| ||| ||||||||||||| ||||||||||||    
T  35944031 aaaaactaacggagatgaccaaaatagtaaactgcataagatttatgggaccaaattgagaca 35943969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 39546670 - 39546736
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| ||||||||| ||||||||  |||||||||| || |||||||||| ||||||||||||||||    
T  39546670 aaaaactaacggagatgaccaaaacggtaaacggcataatatttatgggaccaaattgagacacttt 39546736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 401 - 465
Target Start/End: Complemental strand, 29738407 - 29738343
Alignment:
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||  ||||||||||||||| ||||| ||  ||||||||||||||| ||||    
T  29738407 aacggagaggaccaaaaaggtaaacggcagaagacttatgagactaaattgagacactttatagt 29738343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 19913615 - 19913544
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||||||||||   ||||| |||||||| |||||||| |||||||| ||||||| ||||    
T  19913615 aaaaactaacggagaggaccaaaatgataaaccgcagaagacttatgggaccaaattgaaacactttatagt 19913544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 19914852 - 19914970
Alignment:
Q  347 gacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatca 446  Q
    ||||||||||||| |||| | ||| |||| || |||| || |  |||| |||  |||||| | ||||||||  |||||||| ||||||||||||||  ||    
T  19914852 gacctgcaatcaaatggtcacaataatatcaaaaatattagacattaataaacaaacggatatgaccaaaatggtaaacggtagaagatttatgggtaca 19914951  T
Q  447 aattgagacactttgtagt 465  Q
    |||||||||||||| ||||    
T  19914952 aattgagacactttatagt 19914970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 29739633 - 29739707
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  |||||| | ||||||||  |||||||| |||| |||||||||| |||||||||||||||| ||||    
T  29739633 ttaaaaaacaaacggacatgaccaaaatggtaaacggaagaaaatttatgggaccaaattgagacactttatagt 29739707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 344 - 465
Target Start/End: Complemental strand, 34616307 - 34616181
Alignment:
Q  344 atagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggc-----agaagattta 438  Q
    |||||||||||||| | ||||| |||| ||||||| |||| || |  |||||||| ||||||| | ||||||||  ||||||| |     | ||||||||    
T  34616307 atagacctgcaatcgaatggttgaaatcatattaaaaatattaaacattaaaaaactaacggaaatgaccaaaatggtaaacgacaaaagaaaagattta 34616208  T
Q  439 tgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||| ||||    
T  34616207 tgggaccaaattgagacactttatagt 34616181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 394 - 440
Target Start/End: Complemental strand, 36938804 - 36938758
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatg 440  Q
    |||||||||| |||| |||||||| ||||||||||||||||||||||    
T  36938804 aaaaattaacagagaagaccaaaatagtaaacggcagaagatttatg 36938758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 406 - 459
Target Start/End: Original strand, 2421298 - 2421351
Alignment:
Q  406 agaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    |||||||||||| | ||||||||||||||||| ||||| |||||||| ||||||    
T  2421298 agaggaccaaaataataaacggcagaagatttctgggaccaaattgaaacactt 2421351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 8095469 - 8095404
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| ||||||| |||||||||| |||||||| || |||| | |||||| |||||||||||||||    
T  8095469 aaaaactaacggaaaggaccaaaatagtaaacgacaaaagagtaatgggaccaaattgagacactt 8095404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 20308728 - 20308663
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||||| ||| | |||||||| |||||||| ||||||| ||||| || |||||||||||||||    
T  20308728 aaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacactt 20308663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 21095361 - 21095296
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||||| ||| | |||||||| |||||||| ||||||| ||||| || |||||||||||||||    
T  21095361 aaaaattaatggaaatgaccaaaatagtaaacgacagaagagttatgagaccaaattgagacactt 21095296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 31624023 - 31623958
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||| |||| | |||||| || ||||||||||||| |||||||| ||||||| ||||    
T  31624023 taacggagaggactaaaataataaacgacataagatttatgggaccaaattgaaacactttatagt 31623958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 394 - 459
Target Start/End: Original strand, 41522681 - 41522746
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||| ||||| ||||| |||| |||||||||||||||| |||| ||| |||||||| ||||||    
T  41522681 aaaaattgacggaaaggactaaaacagtaaacggcagaagacttataggaccaaattgacacactt 41522746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 41867915 - 41867980
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||| |||| |  |||||||| || |||||||||| |||||||||||||||| ||||    
T  41867915 taacggagaggactaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagt 41867980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 43275867 - 43275802
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||||||||||| | ||||||||| |||| ||||||||  ||||||||||||||| ||||    
T  43275867 taacggtgaggaccaaaataataaacggcataagagttatgggactaaattgagacactttatagt 43275802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 45385793 - 45385853
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||||||||||| ||||  ||||||| || ||||||||| |||||||||||| |||||||    
T  45385793 taacggagaggactaaaatggtaaacgacataagatttataggatcaaattgaaacacttt 45385853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 582 - 730
Target Start/End: Original strand, 22548413 - 22548560
Alignment:
Q  582 actgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaaatg 681  Q
    |||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| |||||||| ||  | |   ||||||| ||||||   | |    
T  22548413 actgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcactcgcacgcttactgggaaa-cttcccggtagg 22548511  T
Q  682 tcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  22548512 tcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 22548560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 37472526 - 37472455
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| || ||| ||||||||||  ||||||| || |||| |||||||| |||||||||||||||| ||||    
T  37472526 aaaaataaatggaaaggaccaaaatggtaaacgacaaaagacttatgggaccaaattgagacactttatagt 37472455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 465
Target Start/End: Original strand, 43277930 - 43277985
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||||| |||||||| |||| |||||||||||| ||| ||||    
T  43277930 gaccaaaatagtaaacggcataagatttacgggaccaaattgagacattttatagt 43277985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 448
Target Start/End: Complemental strand, 8395118 - 8395064
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaa 448  Q
    ||||| ||||||||||||||||||  |||||||| |||||| |||||||| ||||    
T  8395118 aaaaactaacggagaggaccaaaatggtaaacggaagaagaattatgggaccaaa 8395064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 354 - 460
Target Start/End: Original strand, 45195757 - 45195863
Alignment:
Q  354 aatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgag 453  Q
    ||||||| ||||| ||||||||||| |||| || |  | ||||||||||| | || |||||||| ||  ||||||||||||| ||  |||  ||||||||    
T  45195757 aatcaagcggttataattatattaaaaatattaaacatcaaaaaattaactgtgatgaccaaaatagataacggcagaagatataatggactaaattgag 45195856  T
Q  454 acacttt 460  Q
    |||||||    
T  45195857 acacttt 45195863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 1570205 - 1570270
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| ||||||||||| || |||||   || |||||||||||||||| ||||    
T  1570205 taacggagatgaccaaaatagtaaacggcataaaatttaatagaccaaattgagacactttatagt 1570270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 10844577 - 10844626
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  10844577 gtcacccatcccaaaattgcttcaagtcaagcacgcttaactgtggagtt 10844626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 12827216 - 12827265
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  12827216 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 12827265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 21961946 - 21961885
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagac 455  Q
    ||||| |||||||||||||||||||||  ||||| ||||||  || |||||||| |||||||    
T  21961946 aaaaactaacggagaggaccaaaagagataacggaagaagacataagggatcaatttgagac 21961885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 25144956 - 25144907
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  25144956 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 25144907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 27022300 - 27022349
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  27022300 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 27022349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 56; Significance: 8e-23; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 322 - 465
Target Start/End: Original strand, 32980373 - 32980516
Alignment:
Q  322 tgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagt 421  Q
    |||||||||||| ||  |||  || ||||||||||| | ||||| |||| |||| || |||  || |  |||||||| ||||||||| |||||||| |||    
T  32980373 tgatggttcactattgtatataatggacctgcaatcgaatggttgaaatcatatcaaaaatgttagaaattaaaaaactaacggagatgaccaaaatagt 32980472  T
Q  422 aaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||| |||||||||||||||||||||    
T  32980473 aaacggcagaagatttataggaccaaattgagacactttgtagt 32980516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 47855330 - 47855402
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||| ||||    
T  47855330 aaaaaaataacggagaggaccaaaatagtaaacggcagaagatttataggaccaaattgagacactttatagt 47855402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 394 - 459
Target Start/End: Complemental strand, 23559942 - 23559877
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| |||||||||||||||||| |||||||| ||||||| ||||||||||||||||||||||||    
T  23559942 aaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgggatcaaattgagacactt 23559877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 391 - 456
Target Start/End: Original strand, 19252992 - 19253057
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    ||||||||| |||||| ||||||||||  ||||||||||||| |||||||||||||||||||||||    
T  19252992 ttaaaaaataaacggacaggaccaaaatggtaaacggcagaatatttatgggatcaaattgagaca 19253057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 25583237 - 25583176
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagac 455  Q
    |||||||||| ||||||||||||| |||||||||||||||| |||||||| |||||||||||    
T  25583237 aaaaattaacagagaggaccaaaatagtaaacggcagaagacttatgggaccaaattgagac 25583176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 29536831 - 29536766
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||||  ||||||||||||||| |||||||||||||||| ||||    
T  29536831 taacggagaggaccaaaatagtaaacgaaagaagatttatgggaccaaattgagacactttatagt 29536766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 42632823 - 42632758
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||| |||| |||||||| || |||||||||||||||||||||||||||||| ||||    
T  42632823 taacggagaggactaaaatagtaaacgacataagatttatgggatcaaattgagacactttatagt 42632758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 54653965 - 54654030
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||||| ||||||| |||||||| |||||||||||||||| ||||    
T  54653965 taacggagaggaccaaaatagtaaacgacagaagaattatgggaccaaattgagacactttatagt 54654030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 8371343 - 8371272
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||||| ||||||| ||||||||||||||| | |||||||||||| ||| ||||    
T  8371343 aaaaactaacggagaggaccaaaatagtaaactgcagaagatttatggaaccaaattgagacattttatagt 8371272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 32979211 - 32979140
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||||||||  ||  |||||| ||||||||||||||||||||||||||| ||||    
T  32979211 aaaaactaacggagaggaccaaaagaggtaattgcagaaaatttatgggatcaaattgagacactttatagt 32979140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 47808103 - 47808170
Alignment:
Q  398 attaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||| || ||||| ||||||||||||| || |||||||||||||||| ||||    
T  47808103 attaacggagaggaccaaaatagcaaacgacagaagatttatgagaccaaattgagacactttatagt 47808170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 11220648 - 11220722
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  ||||||| ||||||||| |||||||| |||||||||||| ||| |||||||||||||||| ||||    
T  11220648 ttaaaaaacaaacggaggggaccaaaatagtaaacgacagaagatttataggaccaaattgagacactttatagt 11220722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 47806934 - 47806875
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||||||||||||||||  |||||| ||||||||||||| ||||||||||||||||||||    
T  47806934 taacggagaggaccaaaat-gtaaacagcagaagatttataggatcaaattgagacacttt 47806875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 393 - 443
Target Start/End: Original strand, 29537134 - 29537184
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatggga 443  Q
    |||||| ||||||||||||||||||  ||||||||||||||||||||||||    
T  29537134 aaaaaactaacggagaggaccaaaattgtaaacggcagaagatttatggga 29537184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 11219547 - 11219482
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| |||||||||||||||| | ||| || |||||||||||||||| ||||    
T  11219547 taacggagatgaccaaaatagtaaacggcagaagactcatgagaccaaattgagacactttatagt 11219482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 41386247 - 41386182
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||||| |  ||||||||||| | |||||||||||||||| ||||    
T  41386247 taacggagaggaccaaaatagtaaacgtcgtaagatttatggaaccaaattgagacactttatagt 41386182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 51825620 - 51825685
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| | |||||||| |||||||| |||||||||||||||| |||||||| ||||||| ||||    
T  51825620 taacggatatgaccaaaatagtaaacgacagaagatttatgggaccaaattgaaacactttatagt 51825685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 7820514 - 7820442
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||||||||||||||| |||||||| || || |||||||||  |||||||| ||||||| ||||    
T  7820514 aaaaaactaacggagaggaccaaaacagtaaacgacataaaatttatgggtccaaattgaaacactttatagt 7820442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 10987645 - 10987717
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| |||||| ||||||||||||| |  |||||||| || |||||||||| |||||||||||||||| ||||    
T  10987645 aaaatattaacagagaggaccaaaataaaaaacggcataaaatttatgggaccaaattgagacactttatagt 10987717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 391 - 455
Target Start/End: Original strand, 25585823 - 25585887
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagac 455  Q
    |||||||| ||||||||| ||| |||| |||||||| ||||||||||||| || |||||||||||    
T  25585823 ttaaaaaactaacggagatgactaaaatagtaaacgacagaagatttatgagaccaaattgagac 25585887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 421 - 465
Target Start/End: Original strand, 51401371 - 51401415
Alignment:
Q  421 taaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||||||||| |||||||||||||||| ||||    
T  51401371 taaacggcagaagatttatgggaccaaattgagacactttatagt 51401415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 322 - 405
Target Start/End: Complemental strand, 21515458 - 21515375
Alignment:
Q  322 tgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacgg 405  Q
    ||||||| |||| |||||||| || |||||||||||||||||||||||| | ||||   ||| ||||  |||||||||||||||    
T  21515458 tgatggtgcactattagatacaatggacctgcaatcaagtggttaaaatcacattatacatattatacattaaaaaattaacgg 21515375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 26798899 - 26798970
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||||||||||  ||||||||  ||||| |||||||| |||||||||||| ||| ||||    
T  26798899 aaaaactaacggagaggaccaaaatggtaaacggaggaagaattatgggaccaaattgagacattttatagt 26798970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 330 - 465
Target Start/End: Complemental strand, 43345506 - 43345371
Alignment:
Q  330 cactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggca 429  Q
    |||||||| |||  |||||||||||||| | |||||  ||| |||| || |||| || |  |||||||| |||||||||  |||||||  |||||||  |    
T  43345506 cactcttaaatataatagacctgcaatcgaatggttggaatcatatcaaaaatattaaacattaaaaaactaacggagaaaaccaaaatggtaaacgaga 43345407  T
Q  430 gaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||| |||||||| ||| ||| ||||    
T  43345406 gaagatttatgggaccaaattgaaacattttatagt 43345371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 326 - 465
Target Start/End: Original strand, 47766876 - 47767015
Alignment:
Q  326 ggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaac 425  Q
    |||||||| |||||||| || ||| ||||||||| |||||||||| | || || ||   || |  |||||||| ||||| ||||||| | |  |||||||    
T  47766876 ggttcactattagatacaatggacatgcaatcaaatggttaaaatcacataaaaaaatttagacattaaaaaactaacgcagaggacgacattagtaaac 47766975  T
Q  426 ggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||  ||||| |||||||| |||||||||||||||| ||||    
T  47766976 ggaggaagacttatgggaccaaattgagacactttatagt 47767015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 318 - 465
Target Start/End: Complemental strand, 48253132 - 48252985
Alignment:
Q  318 gtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaa 417  Q
    |||||||  ||||||| |||||||| || ||| ||||||||| |||||||||| | || || ||   || |  |||||||| ||||||||| ||| | |     
T  48253132 gtgttgacagttcactattagatacaatggacatgcaatcaaatggttaaaatcacatcaaaaaatttagacattaaaaaactaacggagatgactacat 48253033  T
Q  418 gagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
     |||||||||  ||||| |||||||| |||||||||||||||| ||||    
T  48253032 tagtaaacggaggaagacttatgggaccaaattgagacactttatagt 48252985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 53808441 - 53808370
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||| ||||| |||||||| |||||||| || ||||||||||||| || ||||||||||||| ||||    
T  53808441 aaaaactaatggagatgaccaaaatagtaaacgacataagatttatgggaccagattgagacactttatagt 53808370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 450
Target Start/End: Complemental strand, 2124146 - 2124096
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaatt 450  Q
    ||||||||| |||||||| ||||||||||| ||||||||||||| ||||||    
T  2124146 taacggagatgaccaaaatagtaaacggcataagatttatgggaccaaatt 2124096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 347 - 465
Target Start/End: Original strand, 8372562 - 8372680
Alignment:
Q  347 gacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatca 446  Q
    ||||||||||| | ||||| |||| |||| || |||| || |  |||||||| ||||||||  |||||||| ||||||| |  |  ||||||||||| ||    
T  8372562 gacctgcaatcgaatggttgaaatcatatcaaaaatattaaacattaaaaaactaacggaggtgaccaaaatagtaaactgttgtggatttatgggacca 8372661  T
Q  447 aattgagacactttgtagt 465  Q
    |||||||||||||| ||||    
T  8372662 aattgagacactttatagt 8372680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 579 - 730
Target Start/End: Complemental strand, 14820439 - 14820289
Alignment:
Q  579 cagactgctttcagggttgccaactgaccccataaactaacactagnnnnnnnagcgtgttttatcctcacttgcctgttgtttgggaaaacttcccaaa 678  Q
    ||||||||||||||| ||||| |||||||||| |||| ||||| ||       |||||||||| ||||||||||| || | |   || |||||| || |     
T  14820439 cagactgctttcaggattgccgactgaccccacaaaccaacacgagtcttttcagcgtgttttgtcctcacttgcatgct-taccgggaaactttccgat 14820341  T
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    | |||| |||||| ||||||| | ||| ||||||| ||||||||||||||||    
T  14820340 aggtcacccatcccaaaattgttccaagtcaagcacgcttaactgtggagtt 14820289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 339 - 465
Target Start/End: Complemental strand, 17345488 - 17345363
Alignment:
Q  339 atactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagattta 438  Q
    |||| |||||| ||||||| | ||||| |||| ||||||| |||| || |  |||||||| |||||||||||||||||| ||  ||| | ||||||||||    
T  17345488 atacaatagacatgcaatcgaatggttcaaatcatattaaaaatattagacattaaaaaactaacggagaggaccaaaa-aggtaacagaagaagattta 17345390  T
Q  439 tgggatcaaattgagacactttgtagt 465  Q
     || | |||||||||| ||||| ||||    
T  17345389 aggaaccaaattgagatactttttagt 17345363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 465
Target Start/End: Complemental strand, 19622127 - 19622057
Alignment:
Q  395 aaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| |||||||||||||||||  ||||||  |||||||||||||| ||  ||||||||||||||| ||||    
T  19622127 aaaactaacggagaggaccaaaccagtaaatagcagaagatttatgagactaaattgagacactttatagt 19622057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 400 - 458
Target Start/End: Original strand, 42633885 - 42633943
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacact 458  Q
    |||| ||||||||||||| | |||||| || ||||||||||||| ||||||||||||||    
T  42633885 taacagagaggaccaaaataataaacgacataagatttatgggaccaaattgagacact 42633943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 393 - 439
Target Start/End: Complemental strand, 47854611 - 47854565
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttat 439  Q
    |||||| |||||||||||||||||| ||||||||| |||||||||||    
T  47854611 aaaaaactaacggagaggaccaaaatagtaaacggaagaagatttat 47854565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 32973256 - 32973191
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||| |||||||  ||||||||||||  || |||| |||||||||||||||| ||||    
T  32973256 taacggagaggacaaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagt 32973191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 32974222 - 32974287
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||||||  ||||||||||||  || |||| |||||||||||||||| ||||    
T  32974222 taacggagatgaccaaaagaggtaacggcagaagacataagggaccaaattgagacactttatagt 32974287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 41387432 - 41387497
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||||||   ||| ||||||||| |||||||||||| ||| ||||    
T  41387432 taacggagaggaccaaaatagtaaacggtgtaaggtttatgggaccaaattgagacattttatagt 41387497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 43103295 - 43103360
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| |||||||||| |||||||||||||| |||||||  | |||||||||| | ||||||||    
T  43103295 taacggaaaggaccaaaatagtaaacggcagaaaatttatgaaaccaaattgagatattttgtagt 43103360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 48035323 - 48035388
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||  ||||||| ||||  || |||| |||||||||||||||| ||||    
T  48035323 taacggagaggaccaaaagaggtaacggcataagacataagggaccaaattgagacactttatagt 48035388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 53048014 - 53047949
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||  |||| |||||||  || |||| |||||||||||||||| ||||    
T  53048014 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagt 53047949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 53049036 - 53049101
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||  |||| |||||||  || |||| |||||||||||||||| ||||    
T  53049036 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagt 53049101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 393 - 456
Target Start/End: Original strand, 13077943 - 13078006
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    |||| ||||||| ||||| |||||| |||||||| || ||||||||||||| |||||| |||||    
T  13077943 aaaatattaacgaagaggtccaaaatagtaaacgacataagatttatgggaccaaattaagaca 13078006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 17350095 - 17350166
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| |||||||||||||||||||||  ||| | ||||||  || |||| |||||||||||||||| ||||    
T  17350095 aaaaactaacggagaggaccaaaagaggtaacaggagaagacataagggaccaaattgagacactttatagt 17350166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 36626848 - 36626789
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||| |||||||||||| |||||||| || |||||||| |||| |||||||| ||||||    
T  36626848 taacgaagaggaccaaaacagtaaacgacataagatttaagggaccaaattgaaacactt 36626789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 460
Target Start/End: Complemental strand, 43102010 - 43101951
Alignment:
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||||| || ||||| ||||| || ||||||| |||||||| ||||||||||||||||    
T  43102010 aacggagatgatcaaaatagtaagcgacagaagaattatgggaccaaattgagacacttt 43101951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 664 - 730
Target Start/End: Original strand, 31284221 - 31284287
Alignment:
Q  664 ggaaaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||||||||   | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  31284221 ggaaaacttcccggcaggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 31284287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 393 - 459
Target Start/End: Complemental strand, 48866265 - 48866199
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    |||||| ||||||||||||||| |  ||||||||| |||||| |||| ||| |||||||| ||||||    
T  48866265 aaaaaactaacggagaggaccatattagtaaacggaagaagacttataggaccaaattgacacactt 48866199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 11179996 - 11180045
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  11179996 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 11180045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 13150516 - 13150565
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  13150516 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 13150565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 410 - 459
Target Start/End: Complemental strand, 21128032 - 21127983
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||||  ||||||||||||||| |||||||| |||||||| ||||||    
T  21128032 gaccaaaatggtaaacggcagaagagttatgggaccaaattgacacactt 21127983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 32227183 - 32227232
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  32227183 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 32227232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 32227684 - 32227635
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  32227684 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 32227635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 32386696 - 32386745
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  32386696 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 32386745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 39287587 - 39287522
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||  |||| ||||| |  || |||| |||||||||||||||| ||||    
T  39287587 taacggagaggaccaaaagaggtaacgacagaaaacataagggaccaaattgagacactttatagt 39287522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 679 - 740
Target Start/End: Complemental strand, 41474183 - 41474122
Alignment:
Q  679 atgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtttttgtagaat 740  Q
    |||||| |||||| ||||||| | ||| ||||||| |||| |||||||||||||| ||||||    
T  41474183 atgtcacccatcccaaaattgttccaagtcaagcacgcttgactgtggagtttttatagaat 41474122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 45422082 - 45422147
Alignment:
Q  318 gtgttgatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaata 383  Q
    |||||| ||||||||  || ||||| |||||||||||||||| ||||||| || |||| |||||||    
T  45422082 gtgttggtggttcacggtttgatacaatagacctgcaatcaaatggttaatatcatatcaagaata 45422147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 50347930 - 50347881
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  50347930 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 50347881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 408 - 465
Target Start/End: Complemental strand, 54752725 - 54752668
Alignment:
Q  408 aggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||| ||||||||||| ||||| ||  ||| |||||||||||||||| ||||    
T  54752725 aggaccaaaatagtaaacggcataagatatacaggaccaaattgagacactttatagt 54752668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 54; Significance: 1e-21; HSPs: 50)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 314 - 402
Target Start/End: Complemental strand, 27897896 - 27897807
Alignment:
Q  314 tcaagtgttgatggttcactctt-agatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaa 402  Q
    |||||||| |||||||||||||| | ||| |||||||||||||||||||||||||||| |||| ||||||||||||  ||||||||||||    
T  27897896 tcaagtgtcgatggttcactctttaaatattatagacctgcaatcaagtggttaaaatgatatcaagaataatatacattaaaaaattaa 27897807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 391 - 458
Target Start/End: Original strand, 13446648 - 13446715
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacact 458  Q
    |||||||| |||||||||||||||| | | ||||||||||||||||||||||| ||||||||||||||    
T  13446648 ttaaaaaactaacggagaggaccaatataataaacggcagaagatttatgggaccaaattgagacact 13446715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 339 - 465
Target Start/End: Original strand, 40926457 - 40926583
Alignment:
Q  339 atactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagattta 438  Q
    ||||||| |||||  ||||||  ||||| ||| ||||||| |||| || |  ||||||| |||||||||||||||||||  |||||||| |||| |||||    
T  40926457 atactatggaccttaaatcaaacggttataatcatattaaaaatattagacattaaaaagttaacggagaggaccaaaacggtaaacggtagaaaattta 40926556  T
Q  439 tgggatcaaattgagacactttgtagt 465  Q
    | ||| |||||||||||||||| ||||    
T  40926557 taggaccaaattgagacactttatagt 40926583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 22746319 - 22746384
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||| ||||| ||||||||||| ||||||||||||| |||||||||||||||| ||||    
T  22746319 taacggagaggatcaaaatagtaaacggcacaagatttatgggaccaaattgagacactttatagt 22746384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 46674933 - 46674998
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||| ||||    
T  46674933 taacggagaggaccaaaatagtaaacggcaaaagatttatgggaccaaatcgagacactttatagt 46674998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 19278470 - 19278410
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| |||||||||||| |||||||||||||||| |||||||| ||||||||||||||||    
T  19278470 taacgaagaggaccaaaatagtaaacggcagaagaattatgggaccaaattgagacacttt 19278410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 465
Target Start/End: Original strand, 46458713 - 46458777
Alignment:
Q  401 aacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||  |||||||| ||||||||||||||| |||||||||||||||| ||||    
T  46458713 aacggagaggaccaaaatggtaaacggaagaagatttatgggaccaaattgagacactttatagt 46458777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 394 - 455
Target Start/End: Complemental strand, 43930442 - 43930381
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagac 455  Q
    |||||||||| ||||||||||||| |||||||| |||||||||||| ||| |||||||||||    
T  43930442 aaaaattaacagagaggaccaaaatagtaaacgacagaagatttataggaccaaattgagac 43930381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 22744870 - 22744798
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||||| ||| |||||||| ||||||| ||||    
T  22744870 aaaatattaacggagaagaccaaaatagtaaacggcataagatttataggaccaaattgaaacactttatagt 22744798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 400 - 456
Target Start/End: Original strand, 36702949 - 36703005
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    ||||||| |||||||||| |||||||||||||| |||||||||| ||||||||||||    
T  36702949 taacggaaaggaccaaaatagtaaacggcagaatatttatgggaccaaattgagaca 36703005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 47163277 - 47163205
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||||||||||||||| ||||||||| | ||||||||||||| |||||| || |||||| ||||    
T  47163277 aaaaaactaacggagaggaccaaaatagtaaacggaaaaagatttatgggaccaaattaaggcactttatagt 47163205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 4857324 - 4857253
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||||||| |||| ||||||||||||||||||| ||||| ||||| |||||| ||| ||||    
T  4857324 aaaaactaacggagaggactaaaacagtaaacggcagaagatttgtgggaccaaatcgagacattttatagt 4857253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 635 - 730
Target Start/End: Original strand, 5406504 - 5406599
Alignment:
Q  635 gtgttttatcctcacttgcctgttgtttgggaaaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||| |||||||| ||  ||| ||| ||||||||| ||| || ||||||||||| |||||||||  || ||||||| ||||||||||||||||    
T  5406504 gtgttttgtcctcactcgcacgttttttcggaaaactttccagaaagtcatccatcccaaaattgctcaaagtcaagcacgcttaactgtggagtt 5406599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 326 - 465
Target Start/End: Original strand, 28326315 - 28326454
Alignment:
Q  326 ggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaac 425  Q
    |||||||| ||| |||  || ||| ||||||||| |||||||||| ||||||| ||   || |  |||||||| ||||||||||||||| || |||||||    
T  28326315 ggttcactattaaatataatggacatgcaatcaaatggttaaaatcatattaaaaaatttagacattaaaaaactaacggagaggaccacaatagtaaac 28326414  T
Q  426 ggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||  ||||| |||| | | |||||||||||||||| ||||    
T  28326415 ggaggaagacttatagaaccaaattgagacactttatagt 28326454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 38406141 - 38406070
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||| |||||||||| |||||||| |||||||||||||| | ||  |||||||||||| ||||    
T  38406141 aaaaattaacggaaaggaccaaaacagtaaacgtcagaagatttatggaaccagtttgagacactttatagt 38406070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 14108002 - 14107884
Alignment:
Q  347 gacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatca 446  Q
    |||||||||||||  ||||| ||||||||||| |||| || |  | |||||| ||||||||||||||||||  || |||| |||||||| || |||| ||    
T  14108002 gacctgcaatcaaacggttataattatattaaaaatattagacatcaaaaaactaacggagaggaccaaaacggtgaacgacagaagatataagggacca 14107903  T
Q  447 aattgagacactttgtagt 465  Q
      |||||||||||| ||||    
T  14107902 ctttgagacactttatagt 14107884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 347 - 465
Target Start/End: Complemental strand, 14417959 - 14417841
Alignment:
Q  347 gacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatca 446  Q
    |||||||||||||  ||||| ||||||||||| |||| || |  | |||||| ||||||||||||||||||  || |||| |||||||| || |||| ||    
T  14417959 gacctgcaatcaaacggttataattatattaaaaatattagacatcaaaaaactaacggagaggaccaaaacggtgaacgacagaagatataagggacca 14417860  T
Q  447 aattgagacactttgtagt 465  Q
      |||||||||||| ||||    
T  14417859 ctttgagacactttatagt 14417841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 391 - 465
Target Start/End: Original strand, 24873587 - 24873661
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  |||||| | ||||||||  ||||||||||||||| |||||||| |||||||||||||||| ||||    
T  24873587 ttaaaaaacaaacggaaatgaccaaaatggtaaacggcagaagacttatgggaccaaattgagacactttatagt 24873661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 394 - 460
Target Start/End: Complemental strand, 26406248 - 26406182
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| ||||||||| ||||||||   |||||||||||||| ||||| |||||||||||||||||||    
T  26406248 aaaaaataacggagatgaccaaaatgttaaacggcagaagagttatgagatcaaattgagacacttt 26406182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 19279611 - 19279676
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| |||||||||| |||||||| || || |||||||||| |||||||||||||||| ||||    
T  19279611 taacggaaaggaccaaaatagtaaacgacaaaaaatttatgggaccaaattgagacactttatagt 19279676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 396 - 465
Target Start/End: Complemental strand, 41126360 - 41126291
Alignment:
Q  396 aaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||||||||||  |||| |||||||  || |||| |||||||||||||||| ||||    
T  41126360 aaattaacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacactttatagt 41126291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 394 - 454
Target Start/End: Original strand, 27899207 - 27899267
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgaga 454  Q
    ||||| ||||||| | |||||||| |||||||| || ||||||||||||||||||||||||    
T  27899207 aaaaactaacggataagaccaaaatagtaaacgacaaaagatttatgggatcaaattgaga 27899267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 35127934 - 35127862
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||| ||| |||||||| ||||||||||| |||||||||||||  ||||||||||| ||| ||||    
T  35127934 aaaatattaacgaagatgaccaaaatagtaaacggcataagatttatgggacaaaattgagacattttatagt 35127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Complemental strand, 43935309 - 43935237
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| ||| || |||||  |||| |||||||||||||||||||||| || |||||||||||||||| ||||    
T  43935309 aaaaaactaatggggaggatgaaaatagtaaacggcagaagatttatgagaccaaattgagacactttatagt 43935237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 43936132 - 43936204
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||| |||||||||||||||||| |||||||| ||||||| ||||| || |||||| ||| ||||| ||||    
T  43936132 aaaaaactaacggagaggaccaaaatagtaaacgacagaagaattatgagaccaaattaagaaactttatagt 43936204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 400 - 455
Target Start/End: Original strand, 22061794 - 22061849
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagac 455  Q
    ||||||||| ||| |||| ||||||||||| ||||||||||||| |||||||||||    
T  22061794 taacggagaagactaaaatagtaaacggcataagatttatgggaccaaattgagac 22061849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 410 - 465
Target Start/End: Complemental strand, 25153765 - 25153710
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  |||||||| ||||||||||||||| |||||||||||||||| ||||    
T  25153765 gaccaaaacggtaaacggaagaagatttatgggaccaaattgagacactttatagt 25153710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 667 - 730
Target Start/End: Complemental strand, 28496052 - 28495989
Alignment:
Q  667 aaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||||||| | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  28496052 aaacttcccaataggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 28495989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 14206799 - 14206725
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||| || ||||| |||||||| |||||||||||| ||| |||||||| ||| ||| ||||    
T  14206799 ttaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagt 14206725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 14215489 - 14215415
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||| || ||||| |||||||| |||||||||||| ||| |||||||| ||| ||| ||||    
T  14215489 ttaaaaaactaacggagatgagcaaaatagtaaacgacagaagatttataggaccaaattgaaacattttatagt 14215415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 2193440 - 2193391
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||||||||||| ||||||||||||||||    
T  2193440 gtcacccatcccaaaattgctccaaatcaagcacgcttaactgtggagtt 2193391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 13122467 - 13122516
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||||||||||| ||||||||||||||||    
T  13122467 gtcacccatcccaaaattgctccaaatcaagcacgcttaactgtggagtt 13122516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 22060580 - 22060515
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||| |||||||| ||||||||||| |||| || ||| | |||||||||||||||| ||||    
T  22060580 taacggagatgaccaaaatagtaaacggcataagacttgtggaaccaaattgagacactttatagt 22060515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 43007648 - 43007713
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||| || |||| |||||||| || |||| |||||||| |||||||||||||||| ||||    
T  43007648 taacggagagaactaaaatagtaaacgacataagacttatgggaccaaattgagacactttatagt 43007713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 460
Target Start/End: Original strand, 48672774 - 48672834
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||||||||||| |||| |||||||| ||   ||||||||||| ||||||||||||||||    
T  48672774 taacggagaggactaaaatagtaaacgacacgcgatttatgggaccaaattgagacacttt 48672834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 413 - 456
Target Start/End: Complemental strand, 36702881 - 36702838
Alignment:
Q  413 caaaagagtaaacggcagaagatttatgggatcaaattgagaca 456  Q
    ||||| |||||||||||||| |||||||||| ||||||||||||    
T  36702881 caaaatagtaaacggcagaatatttatgggaccaaattgagaca 36702838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 326 - 465
Target Start/End: Complemental strand, 41515187 - 41515048
Alignment:
Q  326 ggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaac 425  Q
    |||||||| ||| |||  || ||| ||||||||| |||||||||| |||| || ||   || |  ||||||||||||||||||| |||| || |||||||    
T  41515187 ggttcactattaaatataatggacatgcaatcaaatggttaaaatcatataaaaaactttagacattaaaaaattaacggagagaaccacaatagtaaac 41515088  T
Q  426 ggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
        ||||| |||||||| |||||||| ||||||| ||||    
T  41515087 atatgaagacttatgggaccaaattgaaacactttatagt 41515048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 459
Target Start/End: Complemental strand, 43006502 - 43006443
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||||| |||||||| || |||||||| |||| ||| |||| |||||||||||||||    
T  43006502 taacggagatgaccaaaatagcaaacggcataagacttaggggaccaaattgagacactt 43006443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 410 - 465
Target Start/End: Complemental strand, 46457177 - 46457122
Alignment:
Q  410 gaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||  ||||| || ||||||||||||||| |||||||||||||||| ||||    
T  46457177 gaccaaaatggtaaatggaagaagatttatgggaccaaattgagacactttatagt 46457122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 402 - 465
Target Start/End: Complemental strand, 48671192 - 48671130
Alignment:
Q  402 acggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||| ||| ||||||||||| ||||||||| |||||||||||||| ||||| ||||    
T  48671192 acggagagaaccgaaatagtaaacggcataagatttat-ggatcaaattgagatactttatagt 48671130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 2465917 - 2465868
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  2465917 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 2465868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 2941719 - 2941768
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  2941719 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 2941768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 7646599 - 7646550
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  7646599 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 7646550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 13125098 - 13125147
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  13125098 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 13125147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 28495570 - 28495619
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  28495570 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 28495619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 30223975 - 30224040
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||||||||   ||||||||||||  || |||| |||||||||||| ||| ||||    
T  30223975 taacggagaggaccaaaagatgtaacggcagaagacataagggaccaaattgagacaatttatagt 30224040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 33458426 - 33458362
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||||||| |  ||||||||| |||||| |||||||| | |||||||||||||| ||||    
T  33458426 taacggagaggaccacattagtaaacggaagaagacttatggga-ctaattgagacactttatagt 33458362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 34405553 - 34405602
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  34405553 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 34405602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 400 - 465
Target Start/End: Complemental strand, 34557514 - 34557449
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||| | |||||||||| ||||||||| ||||  || |||| |||||||||||||||| ||||    
T  34557514 taacggatatgaccaaaagaataaacggcaaaagacataagggaccaaattgagacactttatagt 34557449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 42515728 - 42515679
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  42515728 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 42515679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 50; Significance: 3e-19; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 325 - 434
Target Start/End: Original strand, 72910 - 73019
Alignment:
Q  325 tggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaa 424  Q
    ||||||||| | | |||||||||||||||||||||  ||||| ||| ||||||| |||| |||| || |||||| |||||||||||||||||||||  ||    
T  72910 tggttcactgtaatatactatagacctgcaatcaaacggttataatcatattaaaaatattataattaaaaaaactaacggagaggaccaaaagaggtaa 73009  T
Q  425 cggcagaaga 434  Q
    || |||||||    
T  73010 cgacagaaga 73019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 47; Significance: 2e-17; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 22253 - 22179
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| |||||||| |||||||| ||||||||||||| || |||||||||||| ||| ||||    
T  22253 ttaaaaaattaacggagatgaccaaaatagtaaacgacagaagatttatgtgaacaaattgagacattttatagt 22179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 460
Target Start/End: Original strand, 39894 - 39960
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||| |||| ||||||||||||||||  || |   |||||||||||||| ||||||||||||||||    
T  39894 aaaaactaacagagaggaccaaaagaggtaatgtgggaagatttatgggaccaaattgagacacttt 39960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1974 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1974
Description:

Target: scaffold1974; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 621 - 692
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||||||||  ||||||||||||||| ||||    
T  621 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagt 692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1878 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1878
Description:

Target: scaffold1878; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Complemental strand, 653 - 582
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||||||||  ||||||||||||||| ||||    
T  653 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagt 582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290 (Bit Score: 44; Significance: 0.000000000000001; HSPs: 2)
Name: scaffold0290
Description:

Target: scaffold0290; HSP #1
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 394 - 465
Target Start/End: Original strand, 9471 - 9542
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||| ||||||||| ||||||||  ||||||||||||||||||||||||  ||||||||||||||| ||||    
T  9471 aaaaactaacggagatgaccaaaatggtaaacggcagaagatttatgggactaaattgagacactttatagt 9542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0290; HSP #2
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 391 - 465
Target Start/End: Complemental strand, 8505 - 8431
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||| ||||||||| |||| ||| |||||| | | |||||||||||||| ||| |||||||| ||| ||||    
T  8505 ttaaaaaactaacggagatgaccgaaatagtaaatgactgaagatttatgggaccaatttgagacagtttatagt 8431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 43; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 391 - 457
Target Start/End: Original strand, 42336 - 42402
Alignment:
Q  391 ttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacac 457  Q
    |||||| | |||| ||||||||||||| |||||||| ||||||||||||||||||||||||| ||||    
T  42336 ttaaaatactaacagagaggaccaaaatagtaaacgacagaagatttatgggatcaaattgatacac 42402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2127 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold2127
Description:

Target: scaffold2127; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 400 - 465
Target Start/End: Original strand, 514 - 579
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||||||||||||||||| ||||||||||| ||||||||||  | |||||||||||||||| ||||    
T  514 taacggagaggaccaaaatagtaaacggcataagatttatgacaccaaattgagacactttatagt 579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 38; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 323 - 460
Target Start/End: Complemental strand, 54785 - 54648
Alignment:
Q  323 gatggttcactcttagatactatagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagta 422  Q
    ||||||||||| | | |||||||  | ||||||||||  ||||| ||| ||||||| |||| || |  | |||||| ||||||||||||||| |   |||    
T  54785 gatggttcactgtaatatactatgaatctgcaatcaaacggttataatcatattaaaaatattagacatcaaaaaactaacggagaggaccacattggta 54686  T
Q  423 aacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||| |  |||||||||||||| ||||||||||||||||    
T  54685 aacagaggaagatttatgggaccaaattgagacacttt 54648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025; HSP #2
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 405 - 460
Target Start/End: Original strand, 56704 - 56759
Alignment:
Q  405 gagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    ||||||| | ||| ||||||||||||||||||||| ||| ||||||||||||||||    
T  56704 gagaggatctaaacagtaaacggcagaagatttataggaccaaattgagacacttt 56759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 38; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 38; E-Value: 0.000000000005
Query Start/End: Original strand, 344 - 465
Target Start/End: Complemental strand, 96333 - 96212
Alignment:
Q  344 atagacctgcaatcaagtggttaaaattatattaagaataatatattttaaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatggga 443  Q
    |||||||||||||| | ||||  |||  |||| || |||| || || ||||||||   ||||| | ||||||||  |||||||| ||||||||||| |||    
T  96333 atagacctgcaatcgaatggtcgaaaacatatcaaaaatattagatattaaaaaacacacggacatgaccaaaatggtaaacggaagaagatttatcgga 96234  T
Q  444 tcaaattgagacactttgtagt 465  Q
    ||||||||||||||||| ||||    
T  96233 tcaaattgagacactttatagt 96212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0166 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0166
Description:

Target: scaffold0166; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 459
Target Start/End: Original strand, 4216 - 4276
Alignment:
Q  399 ttaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactt 459  Q
    ||||||||||||| |||||  |||||||||||| || ||||| ||||||||||||||||||    
T  4216 ttaacggagaggaacaaaatggtaaacggcagacgagttatgagatcaaattgagacactt 4276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0007 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 393 - 465
Target Start/End: Original strand, 145861 - 145933
Alignment:
Q  393 aaaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    |||| ||||||||||| |||||||| ||||||||||| ||||||||| ||| |||||| ||||| ||| ||||    
T  145861 aaaatattaacggagatgaccaaaatagtaaacggcataagatttattggaccaaattaagacattttatagt 145933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 667 - 730
Target Start/End: Complemental strand, 7140 - 7077
Alignment:
Q  667 aaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||||| |||||| |||| |||| | ||||||||| ||| ||||||||||||||||||||||||    
T  7140 aaactttccaaaaggtcacccataccaaaattgctccaagtcaagcatgcttaactgtggagtt 7077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 36; Significance: 0.00000000007; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 398 - 465
Target Start/End: Original strand, 77178 - 77245
Alignment:
Q  398 attaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacactttgtagt 465  Q
    ||||||||||| |||||||| ||||||||| |||| |||||||||| |||||||| || |||| ||||    
T  77178 attaacggagaagaccaaaacagtaaacggtagaatatttatgggaccaaattgaaacgctttatagt 77245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0177 (Bit Score: 33; Significance: 0.000000004; HSPs: 1)
Name: scaffold0177
Description:

Target: scaffold0177; HSP #1
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 400 - 460
Target Start/End: Complemental strand, 1872 - 1812
Alignment:
Q  400 taacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagacacttt 460  Q
    |||||||||||||||||||||  |||| |||||||  || |||| ||||||||||||||||    
T  1872 taacggagaggaccaaaagaggtaacgacagaagacataagggaccaaattgagacacttt 1812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.00000002; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 667 - 730
Target Start/End: Original strand, 163082 - 163145
Alignment:
Q  667 aaacttcccaaaatgtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    ||||||||| | | |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  163082 aaacttcccgataggtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 163145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 31; Significance: 0.00000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 394 - 444
Target Start/End: Complemental strand, 16068 - 16018
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggat 444  Q
    ||||| ||||||||||||| |||| ||||||||||| ||| ||||||||||    
T  16068 aaaaactaacggagaggactaaaatagtaaacggcataaggtttatgggat 16018  T

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Target: scaffold0499 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0499
Description:

Target: scaffold0499; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 2013 - 2062
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  2013 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 2062  T

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Target: scaffold0322 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0322
Description:

Target: scaffold0322; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 19150 - 19101
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  19150 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 19101  T

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Target: scaffold0277 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0277
Description:

Target: scaffold0277; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 14664 - 14713
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  14664 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 14713  T

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Target: scaffold0243 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Complemental strand, 1404 - 1355
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  1404 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 1355  T

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Target: scaffold0020 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 681 - 730
Target Start/End: Original strand, 107425 - 107474
Alignment:
Q  681 gtcatccatcctaaaattgctacaaatcaagcatgcttaactgtggagtt 730  Q
    |||| |||||| ||||||||| ||| ||||||| ||||||||||||||||    
T  107425 gtcacccatcccaaaattgctccaagtcaagcacgcttaactgtggagtt 107474  T

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Target: scaffold0015 (Bit Score: 30; Significance: 0.0000003; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 394 - 455
Target Start/End: Original strand, 207791 - 207852
Alignment:
Q  394 aaaaattaacggagaggaccaaaagagtaaacggcagaagatttatgggatcaaattgagac 455  Q
    ||||| |||||||||||||||||||||  ||||| ||||||  || |||||||| |||||||    
T  207791 aaaaactaacggagaggaccaaaagagataacggaagaagacataagggatcaatttgagac 207852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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