View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20817_low_14 (Length: 432)

Name: NF20817_low_14
Description: NF20817
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20817_low_14
NF20817_low_14
[»] chr6 (17 HSPs)
chr6 (2-254)||(4282691-4282947)
chr6 (2-214)||(4279451-4279665)
chr6 (2-254)||(11694712-11694969)
chr6 (2-254)||(22622496-22622752)
chr6 (2-247)||(34336038-34336288)
chr6 (2-213)||(26459879-26460094)
chr6 (2-213)||(22618843-22619056)
chr6 (2-203)||(34331465-34331669)
chr6 (2-77)||(26455865-26455940)
chr6 (156-255)||(19577180-19577281)
chr6 (156-259)||(11231439-11231544)
chr6 (156-256)||(8650180-8650281)
chr6 (166-213)||(23606959-23607006)
chr6 (156-213)||(8668210-8668267)
chr6 (156-213)||(19573604-19573661)
chr6 (156-213)||(16688687-16688744)
chr6 (156-215)||(22467667-22467726)
[»] chr7 (26 HSPs)
chr7 (6-259)||(362042-362296)
chr7 (2-220)||(357352-357571)
chr7 (2-254)||(15834890-15835145)
chr7 (2-254)||(12538378-12538634)
chr7 (2-213)||(21627340-21627553)
chr7 (2-213)||(15828438-15828650)
chr7 (2-215)||(44726759-44726975)
chr7 (2-254)||(5332454-5332711)
chr7 (2-215)||(12529368-12529582)
chr7 (2-254)||(37282805-37283065)
chr7 (2-213)||(37973372-37973586)
chr7 (261-422)||(6199004-6199166)
chr7 (2-214)||(5328171-5328386)
chr7 (261-422)||(9066713-9066874)
chr7 (2-213)||(37278662-37278877)
chr7 (2-213)||(45486622-45486835)
chr7 (156-254)||(23532411-23532510)
chr7 (156-246)||(44357135-44357227)
chr7 (156-254)||(15932185-15932284)
chr7 (204-260)||(9066538-9066596)
chr7 (156-254)||(11527458-11527557)
chr7 (156-260)||(6198785-6198887)
chr7 (166-215)||(44360267-44360316)
chr7 (86-154)||(9214576-9214643)
chr7 (204-258)||(783709-783765)
chr7 (204-258)||(18299022-18299078)
[»] chr3 (32 HSPs)
chr3 (2-256)||(11137134-11137395)
chr3 (2-242)||(2688982-2689226)
chr3 (2-213)||(2692657-2692870)
chr3 (2-213)||(11133947-11134161)
chr3 (2-254)||(19808283-19808540)
chr3 (2-213)||(5195424-5195637)
chr3 (2-213)||(19803076-19803290)
chr3 (2-242)||(33484770-33485013)
chr3 (2-213)||(33481011-33481223)
chr3 (2-254)||(20012381-20012622)
chr3 (2-214)||(19777223-19777439)
chr3 (2-119)||(20008685-20008802)
chr3 (2-213)||(19789947-19790162)
chr3 (156-259)||(26907100-26907205)
chr3 (156-260)||(10776764-10776870)
chr3 (156-259)||(17593811-17593917)
chr3 (156-255)||(8856860-8856961)
chr3 (156-254)||(18556776-18556878)
chr3 (156-243)||(16082802-16082891)
chr3 (156-254)||(103304-103403)
chr3 (156-254)||(15417859-15417958)
chr3 (156-254)||(12209009-12209108)
chr3 (156-254)||(15926621-15926719)
chr3 (156-213)||(8854057-8854114)
chr3 (156-213)||(26900539-26900596)
chr3 (159-215)||(14789661-14789716)
chr3 (156-213)||(17601819-17601877)
chr3 (167-213)||(20008603-20008649)
chr3 (156-247)||(14566167-14566258)
chr3 (156-201)||(94496-94541)
chr3 (204-254)||(14429996-14430048)
chr3 (156-213)||(16091978-16092035)
[»] chr2 (13 HSPs)
chr2 (2-254)||(8998023-8998278)
chr2 (2-213)||(7395020-7395220)
chr2 (2-215)||(8168564-8168779)
chr2 (2-213)||(9001947-9002159)
chr2 (142-247)||(8164773-8164880)
chr2 (157-254)||(23692866-23692964)
chr2 (156-254)||(29603679-29603779)
chr2 (2-46)||(8164735-8164779)
chr2 (156-213)||(5771988-5772045)
chr2 (156-213)||(26126026-26126083)
chr2 (156-213)||(7310827-7310884)
chr2 (157-215)||(23696653-23696710)
chr2 (156-213)||(45279072-45279129)
[»] chr8 (29 HSPs)
chr8 (2-254)||(26908441-26908696)
chr8 (2-254)||(18973163-18973420)
chr8 (2-213)||(18977678-18977892)
chr8 (31-255)||(25502580-25502809)
chr8 (2-220)||(25547883-25548104)
chr8 (2-213)||(26905214-26905427)
chr8 (256-421)||(17008132-17008297)
chr8 (256-421)||(17540653-17540818)
chr8 (39-213)||(25560190-25560367)
chr8 (2-109)||(5009709-5009816)
chr8 (156-254)||(21408491-21408591)
chr8 (156-254)||(21802983-21803083)
chr8 (182-255)||(14366290-14366365)
chr8 (156-260)||(17007918-17008023)
chr8 (156-260)||(17540927-17541032)
chr8 (179-254)||(14673517-14673594)
chr8 (156-246)||(20134844-20134936)
chr8 (156-254)||(2269-2368)
chr8 (156-242)||(3300221-3300310)
chr8 (156-213)||(3303288-3303345)
chr8 (156-213)||(21834954-21835011)
chr8 (156-246)||(31709036-31709127)
chr8 (167-213)||(14676712-14676758)
chr8 (166-215)||(20131752-20131801)
chr8 (206-254)||(16083415-16083465)
chr8 (206-254)||(16084822-16084872)
chr8 (206-254)||(16086229-16086279)
chr8 (206-254)||(16087636-16087686)
chr8 (157-213)||(21945924-21945979)
[»] scaffold0010 (1 HSPs)
scaffold0010 (2-254)||(245138-245395)
[»] chr4 (11 HSPs)
chr4 (2-254)||(722707-722964)
chr4 (2-213)||(29724643-29724857)
chr4 (2-214)||(726280-726496)
chr4 (156-259)||(10755096-10755201)
chr4 (156-259)||(10968865-10968970)
chr4 (156-252)||(22751852-22751948)
chr4 (221-260)||(23878909-23878948)
chr4 (156-213)||(10757373-10757430)
chr4 (156-213)||(10970544-10970601)
chr4 (156-254)||(20494707-20494807)
chr4 (29-120)||(22751737-22751828)
[»] chr1 (14 HSPs)
chr1 (2-254)||(555320-555576)
chr1 (2-260)||(19913704-19913967)
chr1 (2-220)||(546071-546291)
chr1 (2-214)||(19911091-19911306)
chr1 (2-213)||(12098573-12098786)
chr1 (156-254)||(15157978-15158078)
chr1 (167-254)||(24280843-24280931)
chr1 (156-242)||(19749648-19749736)
chr1 (156-254)||(20442640-20442739)
chr1 (156-215)||(20435184-20435243)
chr1 (156-214)||(15142594-15142652)
chr1 (156-213)||(19751874-19751931)
chr1 (156-213)||(36910420-36910477)
chr1 (204-250)||(33295754-33295802)
[»] chr5 (10 HSPs)
chr5 (2-260)||(40572198-40572461)
chr5 (2-215)||(35415619-35415836)
chr5 (2-213)||(43041806-43042020)
chr5 (2-213)||(40569411-40569625)
chr5 (156-242)||(26863602-26863690)
chr5 (156-214)||(26857381-26857439)
chr5 (156-220)||(38836886-38836950)
chr5 (156-213)||(38840805-38840862)
chr5 (204-255)||(20679841-20679894)
chr5 (156-220)||(40933337-40933402)
[»] scaffold0272 (1 HSPs)
scaffold0272 (2-213)||(4900-5109)
[»] scaffold0208 (2 HSPs)
scaffold0208 (272-421)||(1126-1273)
scaffold0208 (167-256)||(1404-1500)
[»] scaffold2018 (1 HSPs)
scaffold2018 (2-94)||(1064-1156)
[»] scaffold0045 (1 HSPs)
scaffold0045 (156-259)||(78809-78914)
[»] scaffold1778 (1 HSPs)
scaffold1778 (156-254)||(869-969)
[»] scaffold0264 (1 HSPs)
scaffold0264 (166-254)||(12906-12996)
[»] scaffold0071 (1 HSPs)
scaffold0071 (156-254)||(44280-44379)
[»] scaffold0018 (1 HSPs)
scaffold0018 (156-254)||(194728-194827)
[»] scaffold0130 (2 HSPs)
scaffold0130 (195-260)||(18893-18960)
scaffold0130 (156-216)||(14921-14981)
[»] scaffold0013 (1 HSPs)
scaffold0013 (156-254)||(135685-135784)
[»] scaffold0202 (2 HSPs)
scaffold0202 (156-213)||(10315-10372)
scaffold0202 (156-208)||(13807-13859)
[»] scaffold1505 (1 HSPs)
scaffold1505 (156-213)||(365-422)
[»] scaffold0716 (1 HSPs)
scaffold0716 (156-256)||(2260-2363)
[»] scaffold0179 (1 HSPs)
scaffold0179 (156-245)||(24967-25057)
[»] scaffold0023 (1 HSPs)
scaffold0023 (156-242)||(146811-146898)
[»] scaffold0076 (1 HSPs)
scaffold0076 (166-245)||(37014-37094)


Alignment Details
Target: chr6 (Bit Score: 195; Significance: 1e-106; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 4282947 - 4282691
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  4282947 agtcgccccaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 4282848  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    |||||||||||||||||||  || ||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4282847 ccctcttgagatcattctcaaggcatccgatattcagtctaaaaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 4282748  T
Q  200 tttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||    
T  4282747 tttctgcaagtacagttggcgccgtctgtgggaaacggtaaaactaaccttgaccac 4282691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 4279665 - 4279451
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  4279665 agtcgccccaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 4279566  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||||||||||||||||||| ||| ||  ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4279565 ccctcttgagatcattctcagggcatccgatattcagtctaaaaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 4279466  T
Q  200 tttctgcaagtacag 214  Q
    |||||||||||||||    
T  4279465 tttctgcaagtacag 4279451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 11694712 - 11694969
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaa-gctcattagcaggctataaata 100  Q
    |||||||| ||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||||||||||    
T  11694712 agtcgccccaaaccgcctaaataagctaaaaagactaaaaaccctgctttcttatagcttaagtcacgtaggaaaaaagctcattagcaggctataaata 11694811  T
Q  101 accctcttgagatcattctcgggggatgggatattcagtctaaa--ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||||||||||||||||||||  | |||  |||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11694812 accctcttgagatcattctcaagagatccgatattcagtctaaaaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 11694911  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||||||||||||||||  |||||||||||  |||||||||| ||| ||||||    
T  11694912 ttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactagccttgaccac 11694969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 22622752 - 22622496
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||| | ||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  22622752 agtcgccctaaaccgcctaaataaactaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 22622653  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    |||||||| | |||||||    ||||    ||||||||||  ||||||||| |||||||| |||||| |||||||||  ||||||||| |||||||||||    
T  22622652 ccctcttggggtcattctaaaaggatccactattcagtctaaaaaccctagattagaaccataatctgcgattcttaatcctagaatctttaccgtactt 22622553  T
Q  200 tttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||||||||||||||||||  ||||||||| |  |||||||||||||| ||||||    
T  22622552 tttctgcaagtacagttggcgccgtctgtggggagaggtaaaactaacctcgaccac 22622496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 247
Target Start/End: Complemental strand, 34336288 - 34336038
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagctt-aagtcacgcaggaaaaagctcattagcaggctataaata 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||| ||||||||||    
T  34336288 agtcgccctaaaccgcctaaatgaactaaaaagactaaaaaccctgctttcttagagcttaaagtcacgcaggaaaaagcccattagcaagctataaata 34336189  T
Q  101 accctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    |||||||| || |||||||    ||||    ||||||||||  || ||||||  |||||||||| |||||||||||||||| ||||||||||||||||||    
T  34336188 accctctttaggtcattctaaaaggatccattattcagtctagaagccctagactagaaccctagtctacgattcttagccttagaatccttaccgtact 34336089  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacct 247  Q
    ||||||||||||||||||||||  |||||||||||  ||||||||||||||    
T  34336088 ttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacct 34336038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 26459879 - 26460094
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  26459879 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 26459978  T
Q  102 ccctcttgagatcattctcgggggat---gggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtac 197  Q
    |||||||| | |||||||    ||||       |||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  26459979 ccctcttggggtcattctaaaaggatccattattattcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtac 26460078  T
Q  198 tttttctgcaagtaca 213  Q
    ||||||||||||||||    
T  26460079 tttttctgcaagtaca 26460094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 22619056 - 22618843
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  22619056 agtcgccctaaaccgcctaaataagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 22618957  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    |||||||| | |||||||    ||||    ||||||||||  ||||||||| |||||||| |||||| |||||||||  ||||||||| |||||||||||    
T  22618956 ccctcttggggtcattctaaaaggatccactattcagtctaaaaaccctagattagaaccataatctgcgattcttaatcctagaatctttaccgtactt 22618857  T
Q  200 tttctgcaagtaca 213  Q
    ||||||||||||||    
T  22618856 tttctgcaagtaca 22618843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 114; E-Value: 1e-57
Query Start/End: Original strand, 2 - 203
Target Start/End: Complemental strand, 34331669 - 34331465
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagctt-aagtcacgcaggaaaaagctcattagcaggctataaata 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||| ||||||| |||||||||||||||||||    
T  34331669 agtcgccctaaaccgcctaaatgaactaaaaagactaaaaaccctgctttcttagagcttaaagtcacgcagaaaaaagcccattagcaggctataaata 34331570  T
Q  101 accctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||||||||||| |||||||    ||||    ||||||||||  || ||||||  |||||||||| |||||||||||||||| ||||||||||||||||||    
T  34331569 accctcttgaggtcattctaaaaggatccattattcagtctagaagccctagactagaaccctagtctacgattcttagccttagaatccttaccgtact 34331470  T
Q  199 ttttc 203  Q
    |||||    
T  34331469 ttttc 34331465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 2 - 77
Target Start/End: Original strand, 26455865 - 26455940
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaa 77  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  26455865 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaa 26455940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 19577281 - 19577180
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||| | ||||||||||| |||||||||| |||  |||||||||||||||||||||||||||  ||||||||| |||||||||||||||||||||||    
T  19577281 aaccctagtatacgattcttaaccctagaatctttattgtactttttctgcaagtacagttggcgccgtctgtgggtaatggtaaaactaacctagacca 19577182  T
Q  254 ca 255  Q
    ||    
T  19577181 ca 19577180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 11231439 - 11231544
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||| | ||||||||||| ||||| |||| |||  ||||||||| |||||||||||||||||  |||||||||||| ||||||| ||||||||||||    
T  11231439 aaccctagtatacgattcttaaccctaaaatctttattgtactttttatgcaagtacagttggcgtcgtctgtgggaaaaggtaaaattaacctagacca 11231538  T
Q  254 cactca 259  Q
    ||||||    
T  11231539 cactca 11231544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 8650180 - 8650281
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaa--atggtaaaactaacctagac 251  Q
    |||||||||  |||||||||| ||||||||||||||   ||||||||||||||||||||||||||  |||||||||||    |||||||||||||||| |    
T  8650180 aaccctaatagacgattcttaaccctagaatcctta---tactttttctgcaagtacagttggcgtcgtctgtgggaacctcggtaaaactaacctaggc 8650276  T
Q  252 cacac 256  Q
    |||||    
T  8650277 cacac 8650281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 166 - 213
Target Start/End: Complemental strand, 23607006 - 23606959
Alignment:
Q  166 tacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    ||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  23607006 tacgattcttaaccctagaatccttactgtactttttctgcaagtaca 23606959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 8668210 - 8668267
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  8668210 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 8668267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 19573661 - 19573604
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    ||||||| | ||||||||||| ||||||||||||||  ||||||||||||||||||||    
T  19573661 aaccctagtatacgattcttaaccctagaatccttattgtactttttctgcaagtaca 19573604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 16688687 - 16688744
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  |||||||||||||| |||||    
T  16688687 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaggtaca 16688744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 156 - 215
Target Start/End: Original strand, 22467667 - 22467726
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagt 215  Q
    |||||||||  |||||||||| | |||||||| |||  ||||||||||||||||||||||    
T  22467667 aaccctaatagacgattcttaacactagaatctttattgtactttttctgcaagtacagt 22467726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 187; Significance: 1e-101; HSPs: 26)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 187; E-Value: 1e-101
Query Start/End: Original strand, 6 - 259
Target Start/End: Complemental strand, 362296 - 362042
Alignment:
Q  6 gccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataaccct 105  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||  |||||||| |||||||||||||||||||| |||    
T  362296 gccctaaaccgcctaaacgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgc--gaaaaagcccattagcaggctataaataaacct 362199  T
Q  106 cttgagatcattctcgggggatgggatattcagtctaaa-ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactttttct 204  Q
    |||||||||||||||  |||||   |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  362198 cttgagatcattctcaagggatccaatattcagtctaaaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactttttct 362099  T
Q  205 gcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccacactca 259  Q
    ||||||||||||||||  |||||||||||| ||||||||||||||||||||||||||    
T  362098 gcaagtacagttggcgccgtctgtgggaaacggtaaaactaacctagaccacactca 362042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 357571 - 357352
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  357571 agtcgccctaaaccgcctaaacgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 357472  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
     |||||| |||||||||||  || ||  |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  357471 acctcttaagatcattctcaaggcatccgatattcagtctaaaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccttacttt 357372  T
Q  201 ttctgcaagtacagttggcg 220  Q
    ||||||||||||||||||||    
T  357371 ttctgcaagtacagttggcg 357352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 15835145 - 15834890
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  15835145 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacacaggaaaaagcccattagcaggctataaataa 15835046  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
    |||||||| | |||||||    ||||   ||| ||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  15835045 ccctcttggggtcattctaaaaggatccaataatcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatctttaccgtacttt 15834946  T
Q  201 ttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||    
T  15834945 ttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctcgaccac 15834890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 12538634 - 12538378
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  12538634 agtcgccctaaaccgcctaagtgagctaaaaagactaaaacccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 12538535  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||| |||| | |||||||    ||||    ||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12538534 cccccttggggtcattctaaaaggatccattattcagtctaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactt 12538435  T
Q  200 tttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||||||||||||||||||  |||||||||||| |||||||||| ||| ||||||    
T  12538434 tttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactagccttgaccac 12538378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 21627340 - 21627553
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  21627340 agtcgccctaaaccgcctaagtgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 21627439  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||| |||| | |||||||    ||||||  ||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  21627440 cccccttggggtcattctaaaaggatggattattcagtctaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactt 21627539  T
Q  200 tttctgcaagtaca 213  Q
    ||||||||||||||    
T  21627540 tttctgcaagtaca 21627553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 137; E-Value: 2e-71
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 15828650 - 15828438
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||| ||||||||||||||||||||    
T  15828650 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacacaggaaaaagcccattagcaggctataaataa 15828551  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
    |||||||| | |||||||    ||||   ||| ||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  15828550 ccctcttggggtcattctaaaaggatccaataatcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatctttaccgtacttt 15828451  T
Q  201 ttctgcaagtaca 213  Q
    |||||||||||||    
T  15828450 ttctgcaagtaca 15828438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 44726975 - 44726759
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagctt-aagtcacgcaggaaaaagctcattagcaggctataaata 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||| |||||||||||||||||||    
T  44726975 agtcgccctaaaccgcctaaatgaactaaaaagactaaaaaccctgctttcttagagcttaaagtcacgcaggaaaaagcccattagcaggctataaata 44726876  T
Q  101 accctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||||||||||| |||||||    |||| |  ||||||||||  |||||| || ||||||||||||||| |||||||||||||||||||| ||||||||||    
T  44726875 accctcttgaggtcattctaaaaggatcgattattcagtctagaaacccaagattagaaccctaatctgcgattcttagccctagaatctttaccgtact 44726776  T
Q  199 ttttctgcaagtacagt 215  Q
    |||||||| ||||||||    
T  44726775 ttttctgcgagtacagt 44726759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 5332711 - 5332454
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5332711 agtcgccctaaaccgcctaaataagccaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 5332612  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||    ||||    |||||||||||||   |||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  5332611 cccccttggggtcattctaaaaggatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtact 5332512  T
Q  199 ttttctgcaagtacagttg--gcggtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||| || ||||||||||  || |||||||||||  |||||||||||||| ||||||    
T  5332511 ttttcggctagtacagttgacgccgtctgtgggaagaggtaaaactaacctcgaccac 5332454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 215
Target Start/End: Complemental strand, 12529582 - 12529368
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| ||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  12529582 agtcgccctaaaccgcctaagtgagctaaaaagactaaaa-ccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 12529484  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||| |||| | |||||||    |||| |  ||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  12529483 cccccttggggtcattctaaaaggatcgattattcagtctaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactt 12529384  T
Q  200 tttctgcaagtacagt 215  Q
    ||||||||||||||||    
T  12529383 tttctgcaagtacagt 12529368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 37283065 - 37282805
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| || ||||||||||||||||||||    
T  37283065 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaatgcccattagcaggctataaataa 37282966  T
Q  102 ccctcttgagatcattctcgggggat---gggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtac 197  Q
    |||||||| | |||||||    ||||       |||||||||| |||| |||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  37282965 ccctcttggggtcattctaaaaggatccattattattcagtctaaaactctagattagaaccctagtctacgattcttaaccctagaatccttaccgtac 37282866  T
Q  198 -tttttctgcaagtacagttggcg--gtctgtgggaaat-ggtaaaactaacctagaccac 254  Q
     ||||| |||||||||||||||||  ||||||||||| | |||||||||||||||| ||||    
T  37282865 ttttttttgcaagtacagttggcgccgtctgtgggaactcggtaaaactaacctaggccac 37282805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 128; E-Value: 5e-66
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 37973586 - 37973372
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  37973586 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgatttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 37973487  T
Q  102 ccctcttgagatcattctcgggggat-gggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    |||||||| | |||||||    ||||     ||||||||||  ||||||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  37973486 ccctcttggggtcattctaaaaggatccatttattcagtctaaaaaccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtact 37973387  T
Q  199 ttttctgcaagtaca 213  Q
    |||||||||||||||    
T  37973386 ttttctgcaagtaca 37973372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 261 - 422
Target Start/End: Original strand, 6199004 - 6199166
Alignment:
Q  261 tattcatctgtcctcttcccaagaatacggcaaaggcaactatcaaaattccgagcatcggtggcggagggatcatgatatcacatcaggttgtgtcttt 360  Q
    ||||||||||||||||||||||||||||| |||||||| ||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||    
T  6199004 tattcatctgtcctcttcccaagaatacgacaaaggcagctatcaaaacttcgagcatcggtggcggagggatcatgatatcacatcaggttgtgtcttt 6199103  T
Q  361 ctaattttgttatcggttaatccctatccttttatct-aaaggagattcacgcacggtctctg 422  Q
    |||| |||||||||||||||||||||||||| ||||| ||| |||||||||||||||||||||    
T  6199104 ctaaatttgttatcggttaatccctatccttatatctaaaaagagattcacgcacggtctctg 6199166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 5328386 - 5328171
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5328386 agtcgccctaaaccgcctaaataagccaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 5328287  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||    ||||    |||||||||||||   |||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  5328286 cccccttggggtcattctaaaaggatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtact 5328187  T
Q  199 ttttctgcaagtacag 214  Q
    ||||||||||||||||    
T  5328186 ttttctgcaagtacag 5328171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 261 - 422
Target Start/End: Original strand, 9066713 - 9066874
Alignment:
Q  261 tattcatctgtcctcttcccaagaatacggcaaaggcaactatcaaaattccgagcatcggtggcggagggatcatgatatcacatcaggttgtgtcttt 360  Q
    |||||||||||||||| |||||||||||| |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  9066713 tattcatctgtcctctacccaagaatacgacaaaggcagctgtcaaaactccgagcatcggtggcggagggatcatgatatcacatcaggttctgtcttt 9066812  T
Q  361 ctaattttgttatcggttaatccctatccttttatctaaaggagattcacgcacggtctctg 422  Q
    ||||||||||||||||||||||||||||||| |||||||| |||||||| ||| ||||||||    
T  9066813 ctaattttgttatcggttaatccctatccttatatctaaaagagattcatgcatggtctctg 9066874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 37278877 - 37278662
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  37278877 agtcgccctaaaccgcctaaatgagctaaaaagactaaaacccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 37278778  T
Q  102 ccctcttgagatcattctcgggggat---gggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtac 197  Q
    |||||||| | |||||||    ||||       |||||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||| |||||    
T  37278777 ccctcttggggtcattctaaaaggatccattattattcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttatcgtac 37278678  T
Q  198 tttttctgcaagtaca 213  Q
    ||||| ||||||||||    
T  37278677 tttttttgcaagtaca 37278662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 45486622 - 45486835
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||| |||| ||||||||||||||  |||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  45486622 agtcgccctaaaccgcctaaataagctgaaaagactaaaaacattgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 45486721  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    |||||||| | |||||||    |||||    |||||||||  ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  45486722 ccctcttggggtcattctaaaaggatgcaggattcagtctaaaaaccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtactt 45486821  T
Q  200 tttctgcaagtaca 213  Q
    ||||||| ||||||    
T  45486822 tttctgcgagtaca 45486835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 23532510 - 23532411
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| ||||||||||||||  |||||||| |||||||||||||||| |  |||||||||||| |||||||||||||| |||||    
T  23532510 aaccctaatagacgattcttaaccctagaatccttattgtactttt-ctgcaagtacagttggtgccgtctgtgggaaaaggtaaaactaaccttgacca 23532412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 44357135 - 44357227
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacc 246  Q
    ||||||| | ||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||   ||||||||||  |||||||||||||    
T  44357135 aaccctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagttggcgccatctgtgggaaccggtaaaactaacc 44357227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 15932284 - 15932185
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcc-ttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||||| ||||||||||| ||||||||||| |||| || |||||  |||||||||||||||||  |||||||||||  |||||||||||||| ||||    
T  15932284 aaccctaatatacgattcttaaccctagaatcctttactgtgctttt--tgcaagtacagttggcgccgtctgtgggaagaggtaaaactaaccttgacc 15932187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 204 - 260
Target Start/End: Original strand, 9066538 - 9066596
Alignment:
Q  204 tgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccacactcac 260  Q
    |||||||||||||||||  ||| |||||||| |||||||||||||||||||||||||||    
T  9066538 tgcaagtacagttggcgcagtccgtgggaaacggtaaaactaacctagaccacactcac 9066596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 11527458 - 11527557
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||| | ||||||||||| | ||| ||||||||  ||||||||  |||||||||| ||||||  |||||||||||| |||||||||||||| |||||    
T  11527458 aaccctagtatacgattcttaacactataatccttattgtacttttg-tgcaagtacaattggcgccgtctgtgggaaaaggtaaaactaaccttgacca 11527556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 6198785 - 6198887
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcc-ttaccgtactttttctgcaagtacagttggcggtctgt-gggaaatggtaaaactaacctagacca 253  Q
    ||||||||| |||||||||||  | |||||||| |||  |||||||||  ||||||||||||||||  |||| |||||| |||||||||||| |||||||    
T  6198785 aaccctaatatacgattcttaatcttagaatcccttattgtacttttt--gcaagtacagttggcg--ctgtcgggaaacggtaaaactaacatagacca 6198880  T
Q  254 cactcac 260  Q
    |||||||    
T  6198881 cactcac 6198887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Original strand, 44360267 - 44360316
Alignment:
Q  166 tacgattcttagccctagaatccttaccgtactttttctgcaagtacagt 215  Q
    ||||||||||| ||||||||||||||  ||||||||| ||||||||||||    
T  44360267 tacgattcttaaccctagaatccttattgtactttttatgcaagtacagt 44360316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 86 - 154
Target Start/End: Complemental strand, 9214643 - 9214576
Alignment:
Q  86 agcaggctataaataaccctcttgagatcattctcgggggatgggatattcagtctaaaccctagttta 154  Q
    |||| |||||||||| | |||||||||||||||||  || || ||||| ||||||||||||||||||||    
T  9214643 agcatgctataaataccactcttgagatcattctcaagg-atcggataatcagtctaaaccctagttta 9214576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Complemental strand, 783765 - 783709
Alignment:
Q  204 tgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccacactc 258  Q
    |||||||||||||||||  |||||||| ||| ||||||||||||||| || ||||||    
T  783765 tgcaagtacagttggcgccgtctgtggaaaacggtaaaactaacctatacgacactc 783709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 258
Target Start/End: Original strand, 18299022 - 18299078
Alignment:
Q  204 tgcaagtacagttggcgg--tctgtgggaaatggtaaaactaacctagaccacactc 258  Q
    |||||||||||||||||   | |||||||||  ||||||||||||||||||||||||    
T  18299022 tgcaagtacagttggcgccatatgtgggaaacagtaaaactaacctagaccacactc 18299078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 178; Significance: 7e-96; HSPs: 32)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 178; E-Value: 7e-96
Query Start/End: Original strand, 2 - 256
Target Start/End: Complemental strand, 11137395 - 11137134
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  11137395 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 11137296  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    |||||||||||||||||||  |||||  |||||||| |||   |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  11137295 ccctcttgagatcattctcaagggatccgatattcattctaaaaaaccctagtttagaaccctaatcgatgattcttagccctagaatccttaccgtact 11137196  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaa--atggtaaaactaacctagaccacac 256  Q
    ||||||||||||||||||||||  |||||||||||    |||||||||||||||| ||||||    
T  11137195 ttttctgcaagtacagttggcgccgtctgtgggaacctcggtaaaactaacctaggccacac 11137134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 2 - 242
Target Start/End: Original strand, 2688982 - 2689226
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| ||||||    
T  2688982 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctagaaataa 2689081  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||||||||||||||||||| || |||    ||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2689082 ccctcttgagatcattctcaggagatccattattcagtctaaaaaccctagtttagaaccctaatctacgattcttaaccctagaatccttaccgtactt 2689181  T
Q  200 tttctgcaagtacagttggcg--gtctgtgggaaatggtaaaact 242  Q
    ||||| |||||||||||||||  |||||||||||| |||||||||    
T  2689182 tttctacaagtacagttggcgccgtctgtgggaaacggtaaaact 2689226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 2692657 - 2692870
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  2692657 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 2692756  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||||||||||||||||||| || |||    ||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  2692757 ccctcttgagatcattctcaggagatccattattcagtctaaaaaccctagtttagaaccctaatctacgattcttaaccctagaatccttaccgtactt 2692856  T
Q  200 tttctgcaagtaca 213  Q
    ||||| ||||||||    
T  2692857 tttctacaagtaca 2692870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 11134161 - 11133947
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||| |||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||| | ||||||||||||||||||||    
T  11134161 agtcgccctaaaccgcttaaatgagctaaaaagactaaaaaccttgctttcttagagcttaagtcacgcaggaaaaaacccattagcaggctataaataa 11134062  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||||||||| |||||||||  |||||  |||||||| ||||||   ||||||||||||||||||||| ||||||||||||||||||||||||||||||||    
T  11134061 ccctcttgaaatcattctcaagggatccgatattcattctaaaaagccctagtttagaaccctaatcgacgattcttagccctagaatccttaccgtact 11133962  T
Q  199 ttttctgcaagtaca 213  Q
    |||||||||||||||    
T  11133961 ttttctgcaagtaca 11133947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 1e-78
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 19808540 - 19808283
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  19808540 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 19808441  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    |||||||| | |||||||    ||||    |||||||||||||   |||||| ||||||||||||||| ||||||||| || ||||||| ||||||||||    
T  19808440 ccctcttggggtcattctaaaaggatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccttagaatctttaccgtact 19808341  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||||||||||||||||  |||||||||||  |||||||||| ||| ||||||    
T  19808340 ttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactagcctcgaccac 19808283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 5195424 - 5195637
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||| |||| ||||||| ||||||||||||||||||||    
T  5195424 agtcgccctaaaccgcctaaataagctaaaaagactaaaaaccctgctttcttagagcttaagtcatgcagaaaaaagcccattagcaggctataaataa 5195523  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||||||||||||||||||| | |||| |  ||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  5195524 ccctcttgagatcattctcagtggatcgattattcagtctaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactt 5195623  T
Q  200 tttctgcaagtaca 213  Q
    ||||||| ||||||    
T  5195624 tttctgcgagtaca 5195637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 19803290 - 19803076
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  19803290 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 19803191  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    |||||||| | |||||||    ||||    |||||||||||||   |||||| ||||||||||||||| ||||||||| |||||||||  ||||||||||    
T  19803190 ccctcttggggtcattctaaaaggatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccctagaatttttaccgtact 19803091  T
Q  199 ttttctgcaagtaca 213  Q
    |||||||||||||||    
T  19803090 ttttctgcaagtaca 19803076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 242
Target Start/End: Complemental strand, 33485013 - 33484770
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  33485013 agtcgccctaaaccgcctaagtgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagtccattagcaggctataaataa 33484914  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
    ||| |||| | |||||||    ||||   | | ||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||| ||||| ||||||    
T  33484913 cccccttggggtcattctaaaaggatccaagaatcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatctttaccatacttt 33484814  T
Q  201 ttctgcaagtacagttggcg--gtctgtgggaaatggtaaaact 242  Q
    ||||||||||||||||||||  |||||||||||  |||||||||    
T  33484813 ttctgcaagtacagttggcgccgtctgtgggaaccggtaaaact 33484770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 33481223 - 33481011
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||  ||||||||||||||||||||    
T  33481223 agtcgccctaaaccgcctaagtgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagtccattagcaggctataaataa 33481124  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
    ||| |||| | |||||||    ||||   | | ||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  33481123 cccccttggggtcattctaaaaggatccaagaatcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatctttaccgtacttt 33481024  T
Q  201 ttctgcaagtaca 213  Q
    |||||||||||||    
T  33481023 ttctgcaagtaca 33481011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 20012622 - 20012381
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  20012622 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 20012523  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactttt 201  Q
    |||||| ||| |||||||   |||||   ||||| ||||||             |||||||||  |||||||||| |||||||||| |||||||||||||    
T  20012522 ccctctcgaggtcattctaaagggatccaatattgagtcta-------------aaccctaatagacgattcttaaccctagaatctttaccgtactttt 20012436  T
Q  202 tctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||| |||||||||||||  |||||||||||  |||||||||||||| ||||||    
T  20012435 tctgccagtacagttggcgccgtctgtgggaagaggtaaaactaacctcgaccac 20012381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 19777439 - 19777223
Alignment:
Q  2 agtcgccctaaaccgcctaaatga-gctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaata 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||| |||||| ||||||||    
T  19777439 agtcgccctaaaccgcctaaataaagctaaaaagactaaaaaccctgctttcttagagcgtaagtcacgcaggaaaaagcccatcagcaggttataaata 19777340  T
Q  101 accctcttgagatcattctcgggggatgggatattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtac 197  Q
    |||||| | || | |||||    ||||    ||||||||||   ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||    
T  19777339 accctcctaaggttattctaaaaggatcaattattcagtctaaaaaaccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtac 19777240  T
Q  198 tttttctgcaagtacag 214  Q
    |||||||||||||||||    
T  19777239 tttttctgcaagtacag 19777223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 2 - 119
Target Start/End: Complemental strand, 20008802 - 20008685
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  20008802 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 20008703  T
Q  102 ccctcttgagatcattct 119  Q
    |||||||||| |||||||    
T  20008702 ccctcttgaggtcattct 20008685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 19789947 - 19790162
Alignment:
Q  2 agtcgccctaaaccgcctaaatga-gctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaata 100  Q
    |||||||||||||||||||||| | |||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||| | |||||||||||||    
T  19789947 agtcgccctaaaccgcctaaataaagctaaaaagactaaaaaccctgctttcttagagcttaagtgacgcaggaaaaagcccatcaacaggctataaata 19790046  T
Q  101 accctcttgagatcattctcgggggatgggatattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtac 197  Q
    |||||| |||| | |||||    ||||    ||||||||||   ||||||||  ||||||||||||| | ||||||||| |||||||||| |||||||||    
T  19790047 accctcctgaggttattctaaaaggatccattattcagtctaaaaaaccctaaattagaaccctaatatgcgattcttaaccctagaatctttaccgtac 19790146  T
Q  198 tttttctgcaagtaca 213  Q
    ||||||||||||||||    
T  19790147 tttttctgcaagtaca 19790162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 156 - 259
Target Start/End: Complemental strand, 26907205 - 26907100
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| ||||||||| ||||  |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  26907205 aaccctaatagacgattcttaaccctagaattcttattgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctagacca 26907106  T
Q  254 cactca 259  Q
    ||||||    
T  26907105 cactca 26907100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 10776870 - 10776764
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  || ||||||| ||||||||||||| | ||||||||||||||||||||| |||||  |||||||||||| ||||||||||||||||||||    
T  10776870 aaccctaatagacaattcttaaccctagaatcctttctgtactttttctgcaagtacagatggcgccgtctgtgggaaacggtaaaactaacctagacca 10776771  T
Q  254 cactcac 260  Q
    |||||||    
T  10776770 cactcac 10776764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 17593811 - 17593917
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcc-ttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||||| ||||||||||| ||||||||||| |||  |||||||||||||||||||||||||||  |||||||||||| |||||||||||||||||||    
T  17593811 aaccctaatatacgattcttaaccctagaatcccttattgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctagacc 17593910  T
Q  253 acactca 259  Q
     ||||||    
T  17593911 gcactca 17593917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 255
Target Start/End: Complemental strand, 8856961 - 8856860
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  | |||||||| ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  8856961 aaccctaatagatgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctagacca 8856862  T
Q  254 ca 255  Q
    ||    
T  8856861 ca 8856860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 18556776 - 18556878
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcctt-accgtactttttctgcaagtacagttggcg--gtctgtgggaaat-ggtaaaactaacctagac 251  Q
    |||||||||  |||||||||| ||||||||||||| |  |||||||||||||||||||||||||||  |||||||| |||| ||||||||||||||||||    
T  18556776 aaccctaatagacgattcttaaccctagaatcctttattgtactttttctgcaagtacagttggcgccgtctgtggaaaatcggtaaaactaacctagac 18556875  T
Q  252 cac 254  Q
    |||    
T  18556876 cac 18556878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 156 - 243
Target Start/End: Original strand, 16082802 - 16082891
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaacta 243  Q
    ||||||| | ||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||  |||||||||||| ||||||||||    
T  16082802 aaccctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagttggcgccgtctgtgggaaacggtaaaacta 16082891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 103403 - 103304
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||||| ||||||||||| ||||||||||||||  |||| |||| |||||||||||||||||  |||||| ||||  |||||||||||||| |||||    
T  103403 aaccctaatatacgattcttaaccctagaatccttattgtac-ttttatgcaagtacagttggcgccgtctgtaggaagaggtaaaactaaccttgacca 103305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 15417859 - 15417958
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||||| ||||||||||| ||||||||||||||  ||||  |||||||||||||||||||||  | ||||||| || |||||||||||||| |||||    
T  15417859 aaccctaatatacgattcttaaccctagaatccttattgtac-ctttctgcaagtacagttggcgccgactgtggggaaaggtaaaactaaccttgacca 15417957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 12209108 - 12209009
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcc-ttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||||| |||||||| || ||||||||||| |||  |||||||||  ||||||| ||||||||  |||||||||||| |||||||||||||| ||||    
T  12209108 aaccctaatatacgattcctaaccctagaatcccttattgtacttttt--gcaagtatagttggcgccgtctgtgggaaaaggtaaaactaaccttgacc 12209011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 15926719 - 15926621
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||| | ||||||||||| ||||||||||||||  ||||||||  | |||||||||||||||   | ||||||||| |||||||||||||| |||||    
T  15926719 aaccctagtatacgattcttaaccctagaatccttattgtactttt--ttcaagtacagttggcgctttatgtgggaaaaggtaaaactaaccttgacca 15926622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 8854114 - 8854057
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  8854114 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 8854057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 26900596 - 26900539
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  26900596 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 26900539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 159 - 215
Target Start/End: Complemental strand, 14789716 - 14789661
Alignment:
Q  159 cctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagt 215  Q
    |||||| ||||||||| | |||||||||||||||||||| |||||||||||||||||    
T  14789716 cctaatttacgattctcaaccctagaatccttaccgtac-ttttctgcaagtacagt 14789661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 17601819 - 17601877
Alignment:
Q  156 aaccctaatctacgattcttagccctagaat-ccttaccgtactttttctgcaagtaca 213  Q
    ||||||||| ||||||||||| ||||||||| |||||  ||||||||||||||||||||    
T  17601819 aaccctaatatacgattcttaaccctagaatcccttattgtactttttctgcaagtaca 17601877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Complemental strand, 20008649 - 20008603
Alignment:
Q  167 acgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||| |||||||||| |||||||||||||||||| ||||||    
T  20008649 acgattcttaaccctagaatctttaccgtactttttctgcgagtaca 20008603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 247
Target Start/End: Complemental strand, 14566258 - 14566167
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatc-cttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacct 247  Q
    ||||||| | || ||||||||||||||||||| ||||  ||||||||  |||||||||||||||||  ||||||||| || ||||||||||||||    
T  14566258 aaccctagtatatgattcttagccctagaatctcttattgtactttt--tgcaagtacagttggcgccgtctgtggg-aacggtaaaactaacct 14566167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 201
Target Start/End: Complemental strand, 94541 - 94496
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttt 201  Q
    ||||||||| ||||||||||| ||||||||||||||  ||||||||    
T  94541 aaccctaatatacgattcttaaccctagaatccttattgtactttt 94496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 204 - 254
Target Start/End: Original strand, 14429996 - 14430048
Alignment:
Q  204 tgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||||||||||||||  |||||||||||  |||||||||||||| ||||||    
T  14429996 tgcaagtacagttggcgccgtctgtgggaagaggtaaaactaaccttgaccac 14430048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 16091978 - 16092035
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    ||||||| | ||||||||||| ||||||||| ||||  ||||||||| ||||||||||    
T  16091978 aaccctagtatacgattcttaaccctagaattcttattgtactttttatgcaagtaca 16092035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 161; Significance: 1e-85; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 8998023 - 8998278
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  8998023 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 8998122  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaa-accctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
    |||||||| | |||||||    ||||   ||| ||||||||| ||||||| ||||||||||| ||||||||||||| |||||||||| ||||||||||||    
T  8998123 ccctcttggggtcattctaaaaggatccaataatcagtctaagaccctagattagaaccctagtctacgattcttaaccctagaatctttaccgtacttt 8998222  T
Q  201 ttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||||||||||||||  |||||||||||  |||||||||||||| ||||||    
T  8998223 ttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacctcgaccac 8998278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 7395220 - 7395020
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  7395220 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 7395121  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactttt 201  Q
    ||||||||||||||||||| |  |||  |||||||||| ||||           ||||||||||||||||||||||||||||||||||||||||||||||    
T  7395120 ccctcttgagatcattctcagaagatccgatattcagtttaaa-----------aaccctaatctacgattcttagccctagaatccttaccgtactttt 7395032  T
Q  202 tctgcaagtaca 213  Q
    ||||||||||||    
T  7395031 tctgcaagtaca 7395020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 8168564 - 8168779
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  8168564 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 8168663  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    |||||||| | |||||||    | ||    ||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  8168664 ccctcttggggtcattctaaaagaatccattattcagtctaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactt 8168763  T
Q  200 tttctgcaagtacagt 215  Q
    ||||||||||||||||    
T  8168764 tttctgcaagtacagt 8168779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 9001947 - 9002159
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  9001947 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgttttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 9002046  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
    |||||||| | |||||||    ||||   ||| ||||||| ||||||||| ||||||||||| ||||||||||||| || ||||||| || |||||||||    
T  9002047 ccctcttggggtcattctaaaaggatccaataatcagtctaaaaccctagattagaaccctagtctacgattcttaaccatagaatctttcccgtacttt 9002146  T
Q  201 ttctgcaagtaca 213  Q
    |||||||||||||    
T  9002147 ttctgcaagtaca 9002159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 142 - 247
Target Start/End: Original strand, 8164773 - 8164880
Alignment:
Q  142 aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaa 239  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||||||||| ||||||    
T  8164773 aaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaa 8164872  T
Q  240 actaacct 247  Q
    ||||||||    
T  8164873 actaacct 8164880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 157 - 254
Target Start/End: Original strand, 23692866 - 23692964
Alignment:
Q  157 accctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||| | ||||||||||| |||||||||||||   |||||||| ||||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  23692866 accctattatacgattcttaaccctagaatccttgttgtactttt-ctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctagaccac 23692964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 29603779 - 29603679
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||| | ||||||||||||||  |||||||||||||||||||| ||||||  |||||||||||| |||||||||| ||| |||||    
T  29603779 aaccctaatagacgattctgaaccctagaatccttattgtactttttctgcaagtacaattggcgccgtctgtgggaaaaggtaaaactagccttgacca 29603680  T
Q  254 c 254  Q
    |    
T  29603679 c 29603679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 8164735 - 8164779
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccct 46  Q
    ||||||||||||||||||||||||||||||||| |||||||||||    
T  8164735 agtcgccctaaaccgcctaaatgagctaaaaagtctaaaaaccct 8164779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 5771988 - 5772045
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  5771988 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 5772045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 26126083 - 26126026
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  26126083 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 26126026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 7310884 - 7310827
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  ||| |||||| ||||||||||||||  ||||||||||||||||||||    
T  7310884 aaccctaatagacgtttcttaaccctagaatccttattgtactttttctgcaagtaca 7310827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 157 - 215
Target Start/End: Original strand, 23696653 - 23696710
Alignment:
Q  157 accctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagt 215  Q
    |||||||| ||||||||||| |||||||||||||   |||| |||||||||||||||||    
T  23696653 accctaatatacgattcttaaccctagaatccttgttgtac-ttttctgcaagtacagt 23696710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 45279072 - 45279129
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| |||||| |||||||  ||||||| ||||||||||||    
T  45279072 aaccctaatagacgattcttaaccctaggatccttattgtactttatctgcaagtaca 45279129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 157; Significance: 2e-83; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 26908696 - 26908441
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  26908696 agtcgccctaaaccgcctaaatgagcttaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 26908597  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtacttt 200  Q
    ||| |||| | ||| |||    |||  | ||| ||||||| ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||    
T  26908596 cccccttggggtcagtctaaaaggaccgaataatcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtacttt 26908497  T
Q  201 ttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||||||||||||||  |||||||||||  |||||||||||||||||||||    
T  26908496 ttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacctagaccac 26908441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 18973163 - 18973420
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18973163 agtcgccctaaaccgcctaagtgagctaaaaagacaaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 18973262  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||    ||||    || |||||||   ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18973263 cccccttggggtcattctaaaaggatccattactcagtctaaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtact 18973362  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||||||||||||||||  |||||||||||  |||||||||| ||| ||||||    
T  18973363 ttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactagcctcgaccac 18973420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 18977678 - 18977892
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  18977678 agtcgccctaaaccgcctaagtgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 18977777  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||    ||||    || |||||||   ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  18977778 cccccttggggtcattctaaaaggatccattactcagtctaaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtact 18977877  T
Q  199 ttttctgcaagtaca 213  Q
    |||||||||||||||    
T  18977878 ttttctgcaagtaca 18977892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 133; E-Value: 5e-69
Query Start/End: Original strand, 31 - 255
Target Start/End: Original strand, 25502580 - 25502809
Alignment:
Q  31 aaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataaccctcttgagatcattctcgggggatggg 130  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||| ||||||||||||| |||| | |||||||   |||||  |    
T  25502580 aaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcagtctataaataacccccttggggtcattctaaagggatccg 25502679  T
Q  131 atattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctg 225  Q
    |||||||||||   ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||  |||||    
T  25502680 atattcagtctaaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtacagttggcgccgtctg 25502779  T
Q  226 tgggaaatggtaaaactaacctagaccaca 255  Q
    |||| |  |||||||||||||| |||||||    
T  25502780 tggggagaggtaaaactaaccttgaccaca 25502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 2 - 220
Target Start/End: Original strand, 25547883 - 25548104
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||||| |||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  25547883 agtcgccctgaaccgcctaagtgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 25547982  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaacc-ctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    |||||||||| |||||||    ||||    ||||||||||  |||||   || ||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  25547983 ccctcttgaggtcattctaaaaggatccattattcagtctagaaaccgagagattagaaccctaatctgcgattcttaaccctagaatctttaccgtact 25548082  T
Q  199 ttttctgcaagtacagttggcg 220  Q
    ||||||||||||||||||||||    
T  25548083 ttttctgcaagtacagttggcg 25548104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 26905427 - 26905214
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||| |||||||||||||| ||| |||||||||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  26905427 agtcgccttaaaccgcctaaataagccaaaaagactaaaaaccctactttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 26905328  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||| |||| | |||||||    ||||    ||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  26905327 cccccttggggtcattctaataggatccattattcagtctaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactt 26905228  T
Q  200 tttctgcaagtaca 213  Q
    ||||||||||||||    
T  26905227 tttctgcaagtaca 26905214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 256 - 421
Target Start/End: Original strand, 17008132 - 17008297
Alignment:
Q  256 ctcactattcatctgtcctcttcccaagaatacggcaaaggcaactatcaaaattccgagcatcggtggcggagggatcatgatatcacatcaggttgtg 355  Q
    |||| |||||||||| |||||||||||||||||| |||||  | || |||||| | |||||||||||||| |||||||||||||||||||||||||||||    
T  17008132 ctcattattcatctgccctcttcccaagaatacgacaaagagagctgtcaaaacttcgagcatcggtggcagagggatcatgatatcacatcaggttgtg 17008231  T
Q  356 tctttctaattttgttatcggttaatccctatccttttatctaaaggagattcacgcacggtctct 421  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  17008232 tctttctaactttgttatcagttaatccctatccttatatctaaaagagattcacgcacggtctct 17008297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 256 - 421
Target Start/End: Complemental strand, 17540818 - 17540653
Alignment:
Q  256 ctcactattcatctgtcctcttcccaagaatacggcaaaggcaactatcaaaattccgagcatcggtggcggagggatcatgatatcacatcaggttgtg 355  Q
    |||| |||||||||| |||||||||||||||||| |||||  | || |||||| | |||||||||||||| |||||||||||||||||||||||||||||    
T  17540818 ctcattattcatctgccctcttcccaagaatacgacaaagagagctgtcaaaacttcgagcatcggtggcagagggatcatgatatcacatcaggttgtg 17540719  T
Q  356 tctttctaattttgttatcggttaatccctatccttttatctaaaggagattcacgcacggtctct 421  Q
    ||||||||| ||||||||| |||||||||||||||| |||||||| ||||||||||||||||||||    
T  17540718 tctttctaactttgttatcagttaatccctatccttatatctaaaagagattcacgcacggtctct 17540653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 108; E-Value: 4e-54
Query Start/End: Original strand, 39 - 213
Target Start/End: Original strand, 25560190 - 25560367
Alignment:
Q  39 aaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataaccctcttgagatcattctcgggggatgggatattcag 138  Q
    ||||||||||||||||| ||||||||||||| |||||||||| ||||||||||||||||||||||| |||| | |||||||   |||||  |||||||||    
T  25560190 aaaaccctgctttcttagagcttaagtcacgtaggaaaaagcccattagcaggctataaataacccccttggggtcattctaaagggatccgatattcag 25560289  T
Q  139 tct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||   ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  25560290 tctaaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactttttctgcaagtaca 25560367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 5009816 - 5009709
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  5009816 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 5009717  T
Q  102 ccctcttg 109  Q
    ||||||||    
T  5009716 ccctcttg 5009709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 21408491 - 21408591
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||||||| |||||    
T  21408491 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaaccttgacca 21408590  T
Q  254 c 254  Q
    |    
T  21408591 c 21408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 21802983 - 21803083
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||||||| |||||    
T  21802983 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaaccttgacca 21803082  T
Q  254 c 254  Q
    |    
T  21803083 c 21803083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 182 - 255
Target Start/End: Original strand, 14366290 - 14366365
Alignment:
Q  182 agaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccaca 255  Q
    ||||||||||  |||||||||||||||||||||||||||  |||||||||||| ||||||||||||||||||||||    
T  14366290 agaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctagaccaca 14366365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 260
Target Start/End: Original strand, 17007918 - 17008023
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcc-ttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||||| | ||||||||| ||||||||||| |||  |||||||||  |||||||||||||| |  |||||||||||| |||||||||||||||||||    
T  17007918 aaccctaatatccgattcttaaccctagaatcccttattgtacttttt--gcaagtacagttggggccgtctgtgggaaacggtaaaactaacctagacc 17008015  T
Q  253 acactcac 260  Q
    ||||||||    
T  17008016 acactcac 17008023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 260
Target Start/End: Complemental strand, 17541032 - 17540927
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcc-ttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||||| | ||||||||| ||||||||||| |||  |||||||||  |||||||||||||| |  |||||||||||| |||||||||||||||||||    
T  17541032 aaccctaatatccgattcttaaccctagaatcccttattgtacttttt--gcaagtacagttggggccgtctgtgggaaacggtaaaactaacctagacc 17540935  T
Q  253 acactcac 260  Q
    ||||||||    
T  17540934 acactcac 17540927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 179 - 254
Target Start/End: Original strand, 14673517 - 14673594
Alignment:
Q  179 cctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||||||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||||||| ||||||    
T  14673517 cctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacctcgaccac 14673594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 246
Target Start/End: Complemental strand, 20134936 - 20134844
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacc 246  Q
    ||||||| | ||||||||||| ||||||||||||||  ||||||||| |||||||||||||||||   ||||||||||  |||||||||||||    
T  20134936 aaccctagtatacgattcttaaccctagaatccttattgtactttttatgcaagtacagttggcgccatctgtgggaaccggtaaaactaacc 20134844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 2368 - 2269
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatc-cttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||||| ||||||||||| |||||||||| | ||  |||||||||  ||||||||||||||||  |||||||||||| |||||||||||||| ||||    
T  2368 aaccctaatatacgattcttaaccctagaatcacctattgtacttttt--gcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctcgacc 2271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 3300221 - 3300310
Alignment:
Q  156 aaccctaatctacgattcttagccc-tagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaact 242  Q
    |||||||||  |||||||||| ||| |||||||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||    
T  3300221 aaccctaataaacgattcttaacccctagaatccttatggtactttttctgcaagtacagttggcgccgtctgtgggaaccggtaaaact 3300310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 3303288 - 3303345
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  3303288 aaccctaataaacgattcttaaccctagaatccttattgtactttttctgcaagtaca 3303345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 21834954 - 21835011
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  21834954 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 21835011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 246
Target Start/End: Original strand, 31709036 - 31709127
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacc 246  Q
    ||||||| | ||||||||||| |||||||||| |||  |||| |||| |||||||||||||||||  ||||||||| || |||||||||||||    
T  31709036 aaccctagtatacgattcttaaccctagaatctttattgtac-ttttatgcaagtacagttggcgccgtctgtggggaaaggtaaaactaacc 31709127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 167 - 213
Target Start/End: Original strand, 14676712 - 14676758
Alignment:
Q  167 acgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  14676712 acgattcttaaccctagaatccttattgtactttttctgcaagtaca 14676758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 166 - 215
Target Start/End: Complemental strand, 20131801 - 20131752
Alignment:
Q  166 tacgattcttagccctagaatccttaccgtactttttctgcaagtacagt 215  Q
    ||||||||||| ||||||||||||||  ||||||||| ||||||||||||    
T  20131801 tacgattcttaaccctagaatccttattgtactttttatgcaagtacagt 20131752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 16083465 - 16083415
Alignment:
Q  206 caagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||| ||||||||  |||||||||||| |||||||||||||||||||||    
T  16083465 caagtatagttggcgccgtctgtgggaaaaggtaaaactaacctagaccac 16083415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 16084872 - 16084822
Alignment:
Q  206 caagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||| ||||||||  |||||||||||| |||||||||||||||||||||    
T  16084872 caagtatagttggcgccgtctgtgggaaaaggtaaaactaacctagaccac 16084822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 16086279 - 16086229
Alignment:
Q  206 caagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||| ||||||||  |||||||||||| |||||||||||||||||||||    
T  16086279 caagtatagttggcgccgtctgtgggaaaaggtaaaactaacctagaccac 16086229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 254
Target Start/End: Complemental strand, 16087686 - 16087636
Alignment:
Q  206 caagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||| ||||||||  |||||||||||| |||||||||||||||||||||    
T  16087686 caagtatagttggcgccgtctgtgggaaaaggtaaaactaacctagaccac 16087636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 157 - 213
Target Start/End: Original strand, 21945924 - 21945979
Alignment:
Q  157 accctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||| | ||||||||||| ||||||||||||||  |||| |||||||||||||||    
T  21945924 accctagtatacgattcttaaccctagaatccttattgtac-ttttctgcaagtaca 21945979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 156; Significance: 1e-82; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 245138 - 245395
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  245138 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 245237  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    |||||||| | |||||||    ||||    ||||||||||  ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||||    
T  245238 ccctcttggggtcattctaaaaggatccattattcagtctaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtactt 245337  T
Q  200 tttctgcaagtacagttggcg--gtctgtgggaaat-ggtaaaactaacctagaccac 254  Q
    |||||||||||||||||||||  ||||||||| | | |||||||||||||||| ||||    
T  245338 tttctgcaagtacagttggcgccgtctgtggggactcggtaaaactaacctaggccac 245395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 153; Significance: 6e-81; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 153; E-Value: 6e-81
Query Start/End: Original strand, 2 - 254
Target Start/End: Original strand, 722707 - 722964
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  722707 agtcgccctaaaccgcctaaatgagctgaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 722806  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||    ||||    || |||||||   ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  722807 cccccttggggtcattctaaaaggatccattactcagtctaaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtact 722906  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||    
T  722907 ttttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaaccttgaccac 722964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 29724857 - 29724643
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcagg-aaaaagctcattagcaggctataaata 100  Q
    |||||||| ||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| ||||||| |||||||||||||||||||    
T  29724857 agtcgccccaaaccgcctaaatgagctaaaaagactaaaacccctgctttcttagagcttaagtcacgtaggaaaaaagcccattagcaggctataaata 29724758  T
Q  101 accctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||||||||||||||||| ||    |||  ||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  29724757 accctcttgagatcattttcaacagatctgatattcagtctaaaaaccctagtttagaaccctaatctacgattcttggccctagaatccttaccgtact 29724658  T
Q  199 ttttctgcaagtaca 213  Q
    |||||||||||||||    
T  29724657 ttttctgcaagtaca 29724643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 123; E-Value: 5e-63
Query Start/End: Original strand, 2 - 214
Target Start/End: Original strand, 726280 - 726496
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  726280 agtcgccctaaaccgcctaaatgagctgaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 726379  T
Q  102 ccctcttgagatcattctcgggggatgggatattc-agtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtac 197  Q
    ||| |||| | |||||||    ||||    || || |||||   ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  726380 cccccttggggtcattctaaaaggatccattactcaagtctaaaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtac 726479  T
Q  198 tttttctgcaagtacag 214  Q
    |||||||||||||||||    
T  726480 tttttctgcaagtacag 726496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 10755096 - 10755201
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| |||||||||| |||  ||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  10755096 aaccctaatagacgattcttaaccctagaatctttattgtactttttttgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacctagacca 10755195  T
Q  254 cactca 259  Q
    ||||||    
T  10755196 cactca 10755201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 10968865 - 10968970
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| |||||||||| |||  ||||||||| |||||||||||||||||  |||||||||||| ||||||||||||||||||||    
T  10968865 aaccctaatagacgattcttaaccctagaatctttattgtactttttttgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacctagacca 10968964  T
Q  254 cactca 259  Q
    ||||||    
T  10968965 cactca 10968970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 156 - 252
Target Start/End: Original strand, 22751852 - 22751948
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||| | ||||||||||| ||||||||||||||  ||||||||  | |||||||||||||||  |||||||||||| |||||||||||||| ||||    
T  22751852 aaccctagtatacgattcttaaccctagaatccttattgtactttt--ttcaagtacagttggcgctgtctgtgggaaaaggtaaaactaaccttgacc 22751948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 221 - 260
Target Start/End: Original strand, 23878909 - 23878948
Alignment:
Q  221 gtctgtgggaaatggtaaaactaacctagaccacactcac 260  Q
    |||||||||||| |||||||||||||||||||||||||||    
T  23878909 gtctgtgggaaacggtaaaactaacctagaccacactcac 23878948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 10757373 - 10757430
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| |||||||||| |||  ||||||||||||||||||||    
T  10757373 aaccctaatagacgattcttaaccctagaatctttattgtactttttctgcaagtaca 10757430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 10970544 - 10970601
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| |||||||||| |||  ||||||||||||||||||||    
T  10970544 aaccctaatagacgattcttaaccctagaatctttattgtactttttctgcaagtaca 10970601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 20494707 - 20494807
Alignment:
Q  156 aaccctaatctacgattcttag-ccctagaatcc-ttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagac 251  Q
    ||||||||| |||||||||||  ||||||||||| |||  |||||||||  ||||||||||||||||  |||||| ||||  |||||||||||||| |||    
T  20494707 aaccctaatatacgattcttaaaccctagaatcccttattgtacttttt--gcaagtacagttggcgccgtctgtaggaagaggtaaaactaaccttgac 20494804  T
Q  252 cac 254  Q
    |||    
T  20494805 cac 20494807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 120
Target Start/End: Original strand, 22751737 - 22751828
Alignment:
Q  29 aaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataaccctcttgagatcattctc 120  Q
    ||||||||||||| ||| |||| |||   ||| |||||||||  ||| |||| ||| |||||||| |||||| | |||||||||||||||||    
T  22751737 aaaaagactaaaagcccagcttgcttggggctaaagtcacgctagaataagcccatcagcaggctgtaaataccactcttgagatcattctc 22751828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 151; Significance: 9e-80; HSPs: 14)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 151; E-Value: 9e-80
Query Start/End: Original strand, 2 - 254
Target Start/End: Complemental strand, 555576 - 555320
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||    
T  555576 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattaacagactataaataa 555477  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||| |||| | |||||||    ||||    ||||||||||  ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  555476 cccccttggggtcattctaaaaggatccattattcagtctaaaaaccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtactt 555377  T
Q  200 tttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||||||||||||||||||  |||||||||||| |||||||||||||| ||||||    
T  555376 tttctgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaaccttgaccac 555320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 2 - 260
Target Start/End: Complemental strand, 19913967 - 19913704
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  19913967 agtcgccttaaaccgcctaaataagccaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 19913868  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||     |||    |||||||||||||   |||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  19913867 cccccttggggtcattctaaaaagatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtact 19913768  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccacactcac 260  Q
    ||||||||||||||||||||||  | ||||||| || |||||||||||||||||||||||||||    
T  19913767 ttttctgcaagtacagttggcgccgactgtggggaacggtaaaactaacctagaccacactcac 19913704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 2 - 220
Target Start/End: Complemental strand, 546291 - 546071
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||| ||| ||||||||||    
T  546291 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattaacagactataaataa 546192  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||| |||| | |||||||    ||||    ||||||||||  ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  546191 cccccttggggtcattctaaaaggatccattattcagtctaaaaaccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtactt 546092  T
Q  200 tttctgcaagtacagttggcg 220  Q
    |||||||||||||||||||||    
T  546091 tttctgcaagtacagttggcg 546071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 2 - 214
Target Start/End: Complemental strand, 19911306 - 19911091
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  19911306 agtcgccttaaaccgcctaaataagccaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 19911207  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||    ||||    |||||||||||||   |||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  19911206 cccccttggggtcattctaaaaggatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtact 19911107  T
Q  199 ttttctgcaagtacag 214  Q
    ||||||||||||||||    
T  19911106 ttttctgcaagtacag 19911091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 12098786 - 12098573
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||| |||| |||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||||||||||    
T  12098786 agtcgccctaaaccgcctaaataagctgaaaagactaaaaaccctgctttcttggagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 12098687  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct--aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    |||||||| | |||||||    ||||     |||||||||  ||||||||| ||||||||||||||| ||||||||| |||||||||| |||||||||||    
T  12098686 ccctcttggggtcattctaaaaggatccatgattcagtctaaaaaccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtactt 12098587  T
Q  200 tttctgcaagtaca 213  Q
    ||||||| ||||||    
T  12098586 tttctgcgagtaca 12098573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 15158078 - 15157978
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||||||| |||||    
T  15158078 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaacctcgacca 15157979  T
Q  254 c 254  Q
    |    
T  15157978 c 15157978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 167 - 254
Target Start/End: Complemental strand, 24280931 - 24280843
Alignment:
Q  167 acgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    |||||||||| ||||||||||||||  ||||||||  |||||||||||||||||  |||||||||||| |||||||||||||||||||||    
T  24280931 acgattcttaaccctagaatccttattgtacttttg-tgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctagaccac 24280843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 19749648 - 19749736
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaact 242  Q
    |||||||||  |||||||||| ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||    
T  19749648 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaact 19749736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 20442640 - 20442739
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||| | ||||||||||| ||||||||||||||  ||||||||  |||||||||||||||||  || ||||||||| ||||||||||||||||||||    
T  20442640 aaccctagtatacgattcttaaccctagaatccttattgtactttta-tgcaagtacagttggcgccgtttgtgggaaaaggtaaaactaacctagacca 20442738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 156 - 215
Target Start/End: Complemental strand, 20435243 - 20435184
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagt 215  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||||    
T  20435243 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtacagt 20435184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 15142652 - 15142594
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacag 214  Q
    ||||||||| ||||||||||| ||||||||||||||  |||||||||||||||| ||||    
T  15142652 aaccctaatatacgattcttaaccctagaatccttattgtactttttctgcaagaacag 15142594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 19751874 - 19751931
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  19751874 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 19751931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 36910477 - 36910420
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  36910477 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 36910420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 204 - 250
Target Start/End: Original strand, 33295754 - 33295802
Alignment:
Q  204 tgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctaga 250  Q
    |||||||||||||||||  |||||||||||| |||||||||||||||||    
T  33295754 tgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctaga 33295802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 147; Significance: 2e-77; HSPs: 10)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 2 - 260
Target Start/End: Complemental strand, 40572461 - 40572198
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  40572461 agtcgccttaaaccgcctaaataagccaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 40572362  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||  | |||||||    ||||    |||||||||||||   |||||| ||||||||||||||| ||||||||| ||||| |||| ||||||||||    
T  40572361 cccccttagggtcattctaaaaggatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccctaaaatctttaccgtact 40572262  T
Q  199 ttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccacactcac 260  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||||||||||||||||||||    
T  40572261 ttttctgcaagtacagttggcgccgtctgtgggaaacggtaaaactaacctagaccacactcac 40572198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 2 - 215
Target Start/End: Original strand, 35415619 - 35415836
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  35415619 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 35415718  T
Q  102 ccctcttgagatcattctcgggggat---gggatattcagtct-aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtac 197  Q
    |||||||| | |||||||    ||||       |||||||||| ||||||||| ||||||||||| ||||||||||||| ||||||||||||||||||||    
T  35415719 ccctcttggggtcattctaaaaggatccattattattcagtctaaaaccctagattagaaccctagtctacgattcttaaccctagaatccttaccgtac 35415818  T
Q  198 tttttctgcaagtacagt 215  Q
    ||||| ||||||||||||    
T  35415819 tttttttgcaagtacagt 35415836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 121; E-Value: 8e-62
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 43041806 - 43042020
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||||||||||||||| || |||||||||||||||||| |||||||||||||||||||||||| ||||| ||||||||||||||    
T  43041806 agtcgccctaaaccgcctaaatgagctaaaaatacgaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattatcaggctataaataa 43041905  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtct---aaaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||| | |||||||    ||||     |||||||||   ||||||||| ||||||||||| ||||||||||||| |||||||||||||||||||||    
T  43041906 cccccttggggtcattctaaaaggatccatgattcagtctaaaaaaccctagattagaaccctattctacgattcttaaccctagaatccttaccgtact 43042005  T
Q  199 ttttctgcaagtaca 213  Q
    |||||||||||||||    
T  43042006 ttttctgcaagtaca 43042020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 117; E-Value: 2e-59
Query Start/End: Original strand, 2 - 213
Target Start/End: Complemental strand, 40569625 - 40569411
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    ||||||| |||||||||||||| ||| ||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||    
T  40569625 agtcgccttaaaccgcctaaataagccaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggctataaataa 40569526  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtctaaa---ccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtact 198  Q
    ||| |||  | |||||||    ||||    |||||||||||||   |||||| ||||||||||||||| ||||||||| |||||||||| ||||||||||    
T  40569525 cccccttagggtcattctaaaaggatccattattcagtctaaaaacccctagattagaaccctaatctgcgattcttaaccctagaatctttaccgtact 40569426  T
Q  199 ttttctgcaagtaca 213  Q
    |||||||||||||||    
T  40569425 ttttctgcaagtaca 40569411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 242
Target Start/End: Complemental strand, 26863690 - 26863602
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaact 242  Q
    |||||||||  |||||||||| ||||||||||||||| ||||||||| ||||| |||||||||||  |||||||||||  |||||||||    
T  26863690 aaccctaatagacgattcttaaccctagaatccttactgtactttttatgcaaatacagttggcgccgtctgtgggaagaggtaaaact 26863602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 156 - 214
Target Start/End: Complemental strand, 26857439 - 26857381
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacag 214  Q
    |||||||||  |||||||||| ||||||||||||||| |||||||||||||||||||||    
T  26857439 aaccctaatagacgattcttaaccctagaatccttactgtactttttctgcaagtacag 26857381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 38836886 - 38836950
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg 220  Q
    |||||||||  |||||||||| |||||||||| |||  |||||||||||||||||||||||||||    
T  38836886 aaccctaatagacgattcttaaccctagaatcattattgtactttttctgcaagtacagttggcg 38836950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Original strand, 38840805 - 38840862
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| |||||||||| |||  ||||||||||||||||||||    
T  38840805 aaccctaatagacgattcttaaccctagaatcattattgtactttttctgcaagtaca 38840862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 204 - 255
Target Start/End: Complemental strand, 20679894 - 20679841
Alignment:
Q  204 tgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccaca 255  Q
    |||||||||||||||||  |||||||||||  |||||||||||||| |||||||    
T  20679894 tgcaagtacagttggcgccgtctgtgggaagaggtaaaactaaccttgaccaca 20679841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 220
Target Start/End: Original strand, 40933337 - 40933402
Alignment:
Q  156 aaccctaatctacgattcttagccctagaat-ccttaccgtactttttctgcaagtacagttggcg 220  Q
    ||||||||  ||| ||||||| ||||| ||| |||||  |||||||||||||||||||||||||||    
T  40933337 aaccctaacatactattcttaaccctataattccttattgtactttttctgcaagtacagttggcg 40933402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0272 (Bit Score: 102; Significance: 2e-50; HSPs: 1)
Name: scaffold0272
Description:

Target: scaffold0272; HSP #1
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 2 - 213
Target Start/End: Original strand, 4900 - 5109
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggctataaataa 101  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||  ||||||||||||||||||||    
T  4900 agtcgccctaaaccgcctaagtgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaagaaaaagtccattagcaggctataaataa 4999  T
Q  102 ccctcttgagatcattctcgggggatgggatattcagtcta--aaccctagtttagaaccctaatctacgattcttagccctagaatccttaccgtactt 199  Q
    ||| |||| | |||||||    ||||    |||||||||||  |||||||| |||||    || | ||||||||||| ||||||||||||||||||||||    
T  5000 cccccttggggtcattctaaaaggatccattattcagtctaggaaccctagattaga----tagtttacgattcttaaccctagaatccttaccgtactt 5095  T
Q  200 tttctgcaagtaca 213  Q
    |||||| |||||||    
T  5096 tttctgtaagtaca 5109  T

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Target: scaffold0208 (Bit Score: 91; Significance: 6e-44; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 91; E-Value: 6e-44
Query Start/End: Original strand, 272 - 421
Target Start/End: Complemental strand, 1273 - 1126
Alignment:
Q  272 cctcttcccaagaatacggcaaaggcaactatcaaaattccgagcatcggtggcggagggatcatgatatcacatcaggttgtgtctttctaattttgtt 371  Q
    |||||||||||||||||| | |||||| || |||||| ||| || ||||||||||||||||| |||||||||||||||||||||||||||||| ||||||    
T  1273 cctcttcccaagaatacgactaaggcagctgtcaaaactccaagtatcggtggcggagggattatgatatcacatcaggttgtgtctttctaactttgtt 1174  T
Q  372 atcggttaatccctatccttttatctaaaggagattcacgcacggtctct 421  Q
    ||||||||||||||||||  |||| |||| |||||||||| |||||||||    
T  1173 atcggttaatccctatcc--ttatataaaagagattcacggacggtctct 1126  T

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Target: scaffold0208; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 167 - 256
Target Start/End: Complemental strand, 1500 - 1404
Alignment:
Q  167 acgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--------gtctgtgggaaatggtaaaactaacctagaccacac 256  Q
    |||||||||| ||||||||||||||  |||| |||| |||||||||||||||||        |||||||||||| |||||||||||||||| ||||||    
T  1500 acgattcttaaccctagaatccttattgtac-ttttgtgcaagtacagttggcgccgtctccgtctgtgggaaacggtaaaactaacctaggccacac 1404  T

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Target: scaffold2018 (Bit Score: 81; Significance: 6e-38; HSPs: 1)
Name: scaffold2018
Description:

Target: scaffold2018; HSP #1
Raw Score: 81; E-Value: 6e-38
Query Start/End: Original strand, 2 - 94
Target Start/End: Original strand, 1064 - 1156
Alignment:
Q  2 agtcgccctaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttaaagcttaagtcacgcaggaaaaagctcattagcaggcta 94  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||    
T  1064 agtcgccccaaaccgcctaaatgagctaaaaagactaaaaaccctgctttcttagagcttaagtcacgcaggaaaaagcccattagcaggcta 1156  T

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Target: scaffold0045 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 156 - 259
Target Start/End: Original strand, 78809 - 78914
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||| | ||||||||||| ||||||||||||||| ||||||||| |||||||||||||||||  |||||||||||| |||||||||||||||  |||    
T  78809 aaccctagtatacgattcttaaccctagaatccttactgtactttttgtgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctatgcca 78908  T
Q  254 cactca 259  Q
    ||||||    
T  78909 cactca 78914  T

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Target: scaffold1778 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold1778
Description:

Target: scaffold1778; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 969 - 869
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    |||||||||  |||||||||| ||||||||||||||  |||||||||||||||||||||||||||  |||||||||||  |||||||||||||| |||||    
T  969 aaccctaatagacgattcttaaccctagaatccttagtgtactttttctgcaagtacagttggcgccgtctgtgggaagaggtaaaactaaccttgacca 870  T
Q  254 c 254  Q
    |    
T  869 c 869  T

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Target: scaffold0264 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold0264
Description:

Target: scaffold0264; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 166 - 254
Target Start/End: Complemental strand, 12996 - 12906
Alignment:
Q  166 tacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccac 254  Q
    ||||||||| | ||||||||||||||  ||||||||| |||||||||||||||||  |||||||||||| |||||||||||||| ||||||    
T  12996 tacgattctcaaccctagaatccttattgtactttttttgcaagtacagttggcgccgtctgtgggaaaaggtaaaactaaccttgaccac 12906  T

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Target: scaffold0071 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 44379 - 44280
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||||| ||||||||||| ||||||||||||||  ||||  |||||||||||||||||||||  | ||||||| || |||||||||||||| |||||    
T  44379 aaccctaatatacgattcttaaccctagaatccttattgtac-ctttctgcaagtacagttggcgccgactgtggggaaaggtaaaactaaccttgacca 44281  T

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Target: scaffold0018 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 156 - 254
Target Start/End: Original strand, 194728 - 194827
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacca 253  Q
    ||||||| | ||||||||||| ||||||||||||||  |||| |||| ||| |||||||||||||  |||||||||||| |||||||||| |||||||||    
T  194728 aaccctagtatacgattcttaaccctagaatccttattgtac-ttttatgcgagtacagttggcgccgtctgtgggaaaaggtaaaactagcctagacca 194826  T

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Target: scaffold0130 (Bit Score: 45; Significance: 2e-16; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 195 - 260
Target Start/End: Complemental strand, 18960 - 18893
Alignment:
Q  195 tactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagaccacactcac 260  Q
    ||||||||||||||||||||||||||  |||| ||||||  |||||||||||||||||||||||||||    
T  18960 tactttttctgcaagtacagttggcgccgtctatgggaagaggtaaaactaacctagaccacactcac 18893  T

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Target: scaffold0130; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 156 - 216
Target Start/End: Complemental strand, 14981 - 14921
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagtt 216  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||| |||||||||||    
T  14981 aaccctaatagacgattcttaaccctagaatccttattgtactttttctacaagtacagtt 14921  T

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Target: scaffold0013 (Bit Score: 44; Significance: 7e-16; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 156 - 254
Target Start/End: Complemental strand, 135784 - 135685
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatc-cttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaacctagacc 252  Q
    ||||||||| ||||||||||| |||||||||| | ||  |||||||||  ||||||||||||||||  |||||||||||| |||||||||||||| ||||    
T  135784 aaccctaatatacgattcttaaccctagaatcacctattgtacttttt--gcaagtacagttggcgccgtctgtgggaaaaggtaaaactaacctcgacc 135687  T

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Target: scaffold0202 (Bit Score: 38; Significance: 0.000000000003; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 10372 - 10315
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||||||||||||||    
T  10372 aaccctaatagacgattcttaaccctagaatccttattgtactttttctgcaagtaca 10315  T

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Target: scaffold0202; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 156 - 208
Target Start/End: Complemental strand, 13859 - 13807
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaa 208  Q
    |||||||||  |||||||||| ||||||||||||||  ||||||||| |||||    
T  13859 aaccctaatagacgattcttaaccctagaatccttattgtactttttttgcaa 13807  T

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Target: scaffold1505 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 156 - 213
Target Start/End: Complemental strand, 422 - 365
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtaca 213  Q
    |||||||||  |||||||||| ||||| ||||||||  ||||||||||||||||||||    
T  422 aaccctaatagacgattcttaaccctataatccttattgtactttttctgcaagtaca 365  T

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Target: scaffold0716 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0716
Description:

Target: scaffold0716; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 156 - 256
Target Start/End: Original strand, 2260 - 2363
Alignment:
Q  156 aaccctaatctacgattcttagccctagaat-ccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaa--atggtaaaactaacctaga 250  Q
    ||||||||| ||||||||||| ||||||||| |||||  ||||||||  |||||||||||||||||  |||| ||||||    ||||||||||||||||     
T  2260 aaccctaatatacgattcttaaccctagaatcccttattgtactttt--tgcaagtacagttggcgccgtctttgggaacctcggtaaaactaacctagg 2357  T
Q  251 ccacac 256  Q
    ||||||    
T  2358 ccacac 2363  T

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Target: scaffold0179 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 156 - 245
Target Start/End: Original strand, 24967 - 25057
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatcc-ttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaac 245  Q
    ||||||||  |||| |||||| ||||||||||| |||  ||||||||  |||||||||||||||||  |||||||||||  ||||||||||||    
T  24967 aaccctaagatacgtttcttaaccctagaatcctttattgtactttt--tgcaagtacagttggcgccgtctgtgggaaccggtaaaactaac 25057  T

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Target: scaffold0023 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 156 - 242
Target Start/End: Original strand, 146811 - 146898
Alignment:
Q  156 aaccctaatctacgattcttagccctagaatccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaact 242  Q
    ||||||| | ||||||  ||| ||||||||||||||  |||| |||| |||||||||||||||||  |||||||||||  |||||||||    
T  146811 aaccctagtatacgatatttatccctagaatccttattgtac-ttttatgcaagtacagttggcgccgtctgtgggaatcggtaaaact 146898  T

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Target: scaffold0076 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: scaffold0076
Description:

Target: scaffold0076; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 166 - 245
Target Start/End: Original strand, 37014 - 37094
Alignment:
Q  166 tacgattcttagccctagaat-ccttaccgtactttttctgcaagtacagttggcg--gtctgtgggaaatggtaaaactaac 245  Q
    ||||||||||| ||||||||| |||||  ||||||||  |||||||||||||||||  || ||||||||  ||||||||||||    
T  37014 tacgattcttaaccctagaatcccttattgtactttt--tgcaagtacagttggcgccgtttgtgggaaccggtaaaactaac 37094  T

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