View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2081_low_2 (Length: 349)
Name: NF2081_low_2
Description: NF2081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2081_low_2 |
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Alignment Details
Target: chr1 (Bit Score: 207; Significance: 1e-113; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 207; E-Value: 1e-113
Query Start/End: Original strand, 64 - 337
Target Start/End: Original strand, 38291381 - 38291668
Alignment:
| Q |
64 |
ttgtttttatgaatctactttgaaaattttggattttgaagtttataaaagtggatcgttttgagatttttcttatcaatatggct---tcaaa------ |
154 |
Q |
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| T |
38291381 |
ttgtttttatgaatctactttgaaaattttggattttgaagtttataaaagtggatcgttttgagatttttcttatcaatattcccatctcaaaaaatat |
38291480 |
T |
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| Q |
155 |
---tt--aaacttccagctactaatcttcccactcgaatttggaatgatctagaactcaacgtcggtgtcaaccttaacttttctcaagttccacctgca |
249 |
Q |
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| T |
38291481 |
ggcttcaaaacttccagctactaatcttcccactcgaatttggaatgatctagaacccaacgtcagtgtcaaccttaacttttctcaagttccacctgca |
38291580 |
T |
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| Q |
250 |
cttgtctacattttcattgctttattagaatcacatatatccaatgattattttgatacaaagtaatagtaattataagttggagtat |
337 |
Q |
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| T |
38291581 |
cttatctacattttcattgctttattagaatcacatatatccaatgattattttgatacaaagtaatagtaattataagttggagtat |
38291668 |
T |
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