View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2081_low_4 (Length: 249)

Name: NF2081_low_4
Description: NF2081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2081_low_4
NF2081_low_4
[»] chr8 (37 HSPs)
chr8 (13-249)||(19484244-19484495)
chr8 (148-249)||(8029811-8029912)
chr8 (166-249)||(31625786-31625869)
chr8 (169-249)||(10294982-10295062)
chr8 (166-249)||(14781772-14781855)
chr8 (166-249)||(26856583-26856666)
chr8 (181-244)||(28317075-28317138)
chr8 (183-244)||(17234748-17234810)
chr8 (166-249)||(44725431-44725514)
chr8 (150-235)||(27915551-27915636)
chr8 (150-235)||(27961970-27962055)
chr8 (170-249)||(9288138-9288217)
chr8 (166-233)||(12522422-12522489)
chr8 (166-249)||(18305616-18305699)
chr8 (150-249)||(27878607-27878706)
chr8 (150-249)||(28018788-28018887)
chr8 (183-249)||(6388131-6388197)
chr8 (166-238)||(39467158-39467230)
chr8 (181-249)||(41252193-41252261)
chr8 (166-226)||(43166316-43166376)
chr8 (166-249)||(19717514-19717597)
chr8 (166-249)||(42305244-42305327)
chr8 (183-244)||(37131291-37131353)
chr8 (166-235)||(43308148-43308217)
chr8 (166-238)||(16364195-16364267)
chr8 (170-226)||(26620338-26620394)
chr8 (198-249)||(12522528-12522579)
chr8 (166-249)||(18958367-18958450)
chr8 (166-249)||(32498019-32498102)
chr8 (183-244)||(24067140-24067202)
chr8 (181-238)||(33177851-33177908)
chr8 (183-235)||(35879722-35879775)
chr8 (181-249)||(1527908-1527976)
chr8 (166-249)||(7466799-7466882)
chr8 (169-242)||(41393992-41394065)
chr8 (170-207)||(42423261-42423298)
chr8 (166-202)||(37857409-37857445)
[»] chr1 (50 HSPs)
chr1 (13-249)||(41353471-41353723)
chr1 (13-249)||(11578919-11579171)
chr1 (13-244)||(26757670-26757917)
chr1 (38-249)||(8147367-8147593)
chr1 (105-249)||(4005117-4005262)
chr1 (101-249)||(9192074-9192223)
chr1 (101-249)||(51106942-51107091)
chr1 (38-249)||(1243150-1243377)
chr1 (150-249)||(47371547-47371646)
chr1 (131-242)||(42304452-42304564)
chr1 (166-249)||(45273044-45273127)
chr1 (160-249)||(5209350-5209439)
chr1 (148-249)||(32760069-32760170)
chr1 (166-249)||(49453048-49453131)
chr1 (169-239)||(35177201-35177271)
chr1 (171-236)||(3583549-3583614)
chr1 (181-249)||(7798550-7798618)
chr1 (181-249)||(33886863-33886931)
chr1 (181-249)||(33957319-33957387)
chr1 (181-249)||(34019169-34019237)
chr1 (149-249)||(48966462-48966562)
chr1 (166-249)||(5494736-5494819)
chr1 (166-249)||(6313053-6313136)
chr1 (166-249)||(15834672-15834755)
chr1 (166-249)||(25612569-25612652)
chr1 (166-249)||(29396072-29396155)
chr1 (166-249)||(46328463-46328546)
chr1 (134-239)||(25253553-25253659)
chr1 (183-244)||(1108407-1108468)
chr1 (13-65)||(8147592-8147644)
chr1 (181-249)||(34751575-34751643)
chr1 (166-226)||(48177080-48177140)
chr1 (14-65)||(1243100-1243151)
chr1 (182-249)||(15927349-15927416)
chr1 (166-249)||(18798929-18799012)
chr1 (166-249)||(38535784-38535867)
chr1 (166-249)||(38558002-38558085)
chr1 (148-238)||(28403916-28404006)
chr1 (166-249)||(8140871-8140954)
chr1 (166-249)||(49231484-49231567)
chr1 (166-249)||(51702072-51702155)
chr1 (166-236)||(29219611-29219681)
chr1 (166-219)||(25830887-25830940)
chr1 (186-242)||(49236974-49237030)
chr1 (183-242)||(52182383-52182443)
chr1 (183-244)||(49971599-49971662)
chr1 (187-249)||(3593296-3593358)
chr1 (192-244)||(27257872-27257924)
chr1 (201-249)||(18954515-18954563)
chr1 (166-218)||(28387093-28387145)
[»] chr7 (46 HSPs)
chr7 (13-249)||(4639693-4639945)
chr7 (38-249)||(14741455-14741681)
chr7 (100-199)||(37915825-37915926)
chr7 (131-239)||(42610656-42610765)
chr7 (166-236)||(21067869-21067939)
chr7 (171-249)||(44256406-44256484)
chr7 (169-249)||(23017021-23017101)
chr7 (166-238)||(37328394-37328466)
chr7 (166-239)||(7993643-7993716)
chr7 (181-249)||(21024095-21024163)
chr7 (166-249)||(510122-510205)
chr7 (183-249)||(11735194-11735261)
chr7 (166-249)||(28342787-28342870)
chr7 (166-249)||(39784583-39784666)
chr7 (166-249)||(40460360-40460443)
chr7 (181-249)||(14732298-14732366)
chr7 (181-249)||(35313586-35313654)
chr7 (181-240)||(19594248-19594307)
chr7 (166-249)||(29585990-29586073)
chr7 (166-249)||(29614441-29614524)
chr7 (166-249)||(29893448-29893531)
chr7 (166-249)||(30823114-30823197)
chr7 (166-249)||(47067186-47067269)
chr7 (166-244)||(39028568-39028646)
chr7 (166-239)||(3023420-3023493)
chr7 (166-238)||(8675818-8675891)
chr7 (13-65)||(14741680-14741733)
chr7 (166-239)||(44121579-44121652)
chr7 (166-238)||(21486182-21486254)
chr7 (166-226)||(23101790-23101850)
chr7 (192-244)||(33497107-33497159)
chr7 (166-238)||(33891880-33891952)
chr7 (166-249)||(12740846-12740929)
chr7 (166-249)||(18838886-18838969)
chr7 (181-244)||(38910515-38910578)
chr7 (166-249)||(41827804-41827887)
chr7 (166-249)||(48136874-48136957)
chr7 (181-238)||(1254471-1254528)
chr7 (181-242)||(34656641-34656702)
chr7 (170-249)||(28034498-28034577)
chr7 (166-249)||(37972523-37972606)
chr7 (183-244)||(26201794-26201856)
chr7 (177-222)||(16709489-16709534)
chr7 (177-222)||(17683725-17683770)
chr7 (212-249)||(43172183-43172220)
chr7 (181-249)||(6268530-6268598)
[»] chr3 (40 HSPs)
chr3 (13-249)||(49296145-49296396)
chr3 (13-249)||(53835991-53836240)
chr3 (13-236)||(22489317-22489543)
chr3 (101-249)||(8598688-8598837)
chr3 (150-249)||(33693285-33693384)
chr3 (150-249)||(49458387-49458486)
chr3 (150-249)||(16155193-16155292)
chr3 (169-239)||(21386476-21386546)
chr3 (149-249)||(4962703-4962803)
chr3 (166-249)||(26107805-26107888)
chr3 (166-239)||(48379636-48379709)
chr3 (181-249)||(9818568-9818636)
chr3 (166-249)||(20833373-20833456)
chr3 (166-249)||(50902950-50903033)
chr3 (169-249)||(39038566-39038646)
chr3 (148-249)||(7665620-7665720)
chr3 (166-249)||(37455323-37455406)
chr3 (166-249)||(52810834-52810917)
chr3 (171-249)||(51737333-51737411)
chr3 (152-241)||(7437546-7437635)
chr3 (169-249)||(18750119-18750199)
chr3 (166-249)||(31645902-31645985)
chr3 (166-249)||(34483739-34483822)
chr3 (166-249)||(36673793-36673876)
chr3 (166-249)||(40897607-40897690)
chr3 (166-249)||(54629327-54629410)
chr3 (183-244)||(25049905-25049967)
chr3 (181-235)||(49293846-49293900)
chr3 (179-249)||(52617626-52617696)
chr3 (181-249)||(47467415-47467483)
chr3 (169-249)||(17946704-17946780)
chr3 (166-249)||(23753030-23753113)
chr3 (181-236)||(27261435-27261490)
chr3 (166-249)||(50761741-50761824)
chr3 (195-249)||(43172956-43173010)
chr3 (183-244)||(45602422-45602484)
chr3 (169-226)||(42736359-42736416)
chr3 (168-239)||(44905498-44905569)
chr3 (181-222)||(37832628-37832669)
chr3 (196-244)||(53645332-53645380)
[»] chr5 (25 HSPs)
chr5 (13-249)||(28622987-28623239)
chr5 (101-249)||(7125088-7125237)
chr5 (13-238)||(37797938-37798181)
chr5 (148-249)||(5651158-5651259)
chr5 (181-249)||(21238763-21238831)
chr5 (181-249)||(2675078-2675146)
chr5 (181-249)||(33892846-33892914)
chr5 (169-249)||(1460790-1460870)
chr5 (166-249)||(4240107-4240190)
chr5 (166-249)||(37014332-37014415)
chr5 (166-249)||(39852848-39852931)
chr5 (166-249)||(5949589-5949672)
chr5 (166-239)||(1151932-1152005)
chr5 (166-235)||(13999735-13999804)
chr5 (166-249)||(4549899-4549982)
chr5 (166-249)||(13926409-13926492)
chr5 (166-249)||(29716780-29716863)
chr5 (132-198)||(34218540-34218607)
chr5 (166-249)||(40013346-40013429)
chr5 (183-244)||(16548850-16548912)
chr5 (148-249)||(29758735-29758834)
chr5 (187-242)||(34909628-34909683)
chr5 (182-235)||(16497741-16497794)
chr5 (181-234)||(19223054-19223107)
chr5 (201-249)||(25868828-25868876)
[»] chr4 (50 HSPs)
chr4 (13-249)||(29469192-29469445)
chr4 (104-244)||(42937339-42937480)
chr4 (148-249)||(8084238-8084339)
chr4 (131-239)||(50517232-50517341)
chr4 (13-92)||(8084394-8084473)
chr4 (161-249)||(23671360-23671448)
chr4 (131-239)||(26491078-26491187)
chr4 (169-249)||(41725591-41725671)
chr4 (166-249)||(29855994-29856077)
chr4 (166-249)||(49501173-49501256)
chr4 (166-249)||(49507238-49507321)
chr4 (181-249)||(6487324-6487392)
chr4 (146-238)||(46286749-46286841)
chr4 (181-244)||(9972807-9972870)
chr4 (170-249)||(29510061-29510140)
chr4 (166-233)||(37916283-37916350)
chr4 (166-249)||(49834474-49834557)
chr4 (183-244)||(871843-871905)
chr4 (181-249)||(51967306-51967374)
chr4 (166-249)||(5441880-5441963)
chr4 (146-249)||(24966490-24966593)
chr4 (181-244)||(26448665-26448728)
chr4 (166-249)||(28484374-28484457)
chr4 (166-249)||(37828070-37828153)
chr4 (166-249)||(48261556-48261639)
chr4 (181-244)||(54561253-54561316)
chr4 (181-249)||(8563364-8563432)
chr4 (166-249)||(27768542-27768625)
chr4 (166-239)||(32322554-32322628)
chr4 (181-242)||(40162825-40162886)
chr4 (201-249)||(33138829-33138877)
chr4 (166-249)||(5800442-5800525)
chr4 (166-249)||(50018670-50018753)
chr4 (166-249)||(51321334-51321417)
chr4 (182-249)||(56423982-56424049)
chr4 (182-242)||(23170738-23170798)
chr4 (166-226)||(23987697-23987757)
chr4 (166-226)||(30966983-30967043)
chr4 (182-236)||(29966401-29966455)
chr4 (174-244)||(54341625-54341695)
chr4 (183-240)||(55165563-55165621)
chr4 (183-235)||(24453923-24453976)
chr4 (181-222)||(26955392-26955433)
chr4 (166-239)||(32683668-32683741)
chr4 (168-249)||(54853118-54853199)
chr4 (181-244)||(14334428-14334491)
chr4 (181-244)||(21486549-21486612)
chr4 (166-220)||(29649645-29649699)
chr4 (195-236)||(32889938-32889979)
chr4 (201-249)||(41470352-41470400)
[»] chr2 (42 HSPs)
chr2 (38-249)||(18899774-18900000)
chr2 (148-249)||(40829665-40829766)
chr2 (181-249)||(13898505-13898573)
chr2 (181-249)||(14039122-14039190)
chr2 (150-249)||(18727620-18727719)
chr2 (175-249)||(15224259-15224333)
chr2 (166-249)||(18177749-18177832)
chr2 (181-244)||(38413458-38413521)
chr2 (166-244)||(31847207-31847285)
chr2 (169-239)||(35404311-35404381)
chr2 (181-249)||(3991802-3991870)
chr2 (181-249)||(19948567-19948635)
chr2 (166-226)||(38295707-38295767)
chr2 (150-249)||(2308687-2308786)
chr2 (166-249)||(28739935-28740018)
chr2 (166-249)||(43825318-43825401)
chr2 (181-244)||(45161137-45161200)
chr2 (181-242)||(41978873-41978934)
chr2 (169-249)||(3575319-3575399)
chr2 (181-249)||(11153354-11153422)
chr2 (166-249)||(7027381-7027464)
chr2 (166-249)||(28845063-28845146)
chr2 (166-249)||(33136094-33136177)
chr2 (181-244)||(33262887-33262950)
chr2 (182-233)||(43318766-43318817)
chr2 (183-244)||(15926412-15926474)
chr2 (13-65)||(18899722-18899775)
chr2 (170-238)||(6224222-6224290)
chr2 (166-249)||(10657908-10657991)
chr2 (166-249)||(13833060-13833143)
chr2 (166-249)||(25288641-25288724)
chr2 (166-249)||(26789263-26789346)
chr2 (166-249)||(43078968-43079051)
chr2 (169-238)||(34342278-34342347)
chr2 (183-238)||(3858427-3858483)
chr2 (170-249)||(379408-379487)
chr2 (183-236)||(32293954-32294008)
chr2 (181-239)||(43304976-43305034)
chr2 (148-249)||(24025877-24025978)
chr2 (166-218)||(3464111-3464163)
chr2 (183-249)||(32242211-32242278)
chr2 (201-249)||(12877715-12877763)
[»] chr6 (24 HSPs)
chr6 (101-249)||(1463594-1463742)
chr6 (105-249)||(6788129-6788274)
chr6 (116-249)||(10113718-10113851)
chr6 (131-249)||(16438735-16438854)
chr6 (159-249)||(3000269-3000359)
chr6 (169-249)||(31975643-31975723)
chr6 (181-249)||(31996251-31996319)
chr6 (170-244)||(2606929-2607003)
chr6 (182-238)||(21199594-21199650)
chr6 (166-249)||(31896114-31896197)
chr6 (183-249)||(8779586-8779652)
chr6 (146-222)||(24194469-24194546)
chr6 (169-249)||(4200095-4200175)
chr6 (169-249)||(31067909-31067989)
chr6 (166-238)||(34773873-34773945)
chr6 (186-249)||(31535068-31535131)
chr6 (179-249)||(14262090-14262160)
chr6 (179-249)||(7497575-7497645)
chr6 (192-244)||(13461407-13461459)
chr6 (166-226)||(30384705-30384765)
chr6 (148-239)||(12029014-12029105)
chr6 (203-249)||(28900863-28900909)
chr6 (172-249)||(34758726-34758803)
chr6 (201-242)||(7835387-7835428)
[»] scaffold1128 (1 HSPs)
scaffold1128 (166-249)||(893-976)
[»] scaffold0263 (1 HSPs)
scaffold0263 (101-198)||(391-489)
[»] scaffold0421 (1 HSPs)
scaffold0421 (181-249)||(1728-1796)
[»] scaffold0543 (1 HSPs)
scaffold0543 (166-249)||(11002-11085)
[»] scaffold0013 (1 HSPs)
scaffold0013 (179-238)||(89320-89379)
[»] scaffold0383 (1 HSPs)
scaffold0383 (169-249)||(16673-16753)
[»] scaffold0152 (2 HSPs)
scaffold0152 (169-249)||(20909-20989)
scaffold0152 (169-249)||(28812-28892)
[»] scaffold0246 (1 HSPs)
scaffold0246 (181-249)||(1396-1464)
[»] scaffold0042 (1 HSPs)
scaffold0042 (166-249)||(57705-57788)
[»] scaffold0110 (1 HSPs)
scaffold0110 (166-239)||(39276-39349)
[»] scaffold1504 (1 HSPs)
scaffold1504 (179-249)||(1344-1414)
[»] scaffold0573 (1 HSPs)
scaffold0573 (203-249)||(8885-8931)
[»] scaffold0347 (1 HSPs)
scaffold0347 (166-249)||(15139-15226)


Alignment Details
Target: chr8 (Bit Score: 155; Significance: 2e-82; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 155; E-Value: 2e-82
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 19484495 - 19484244
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggcca----- 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||         
T  19484495 aaaatgatatgaaatgtttcacttcagtaagttgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggccaaaaaa 19484396  T
Q  107 --------tttttgaagaaaaataa-tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaa 197  Q
            |||||||||||||| || |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  19484395 atgggccatttttgaagaaaaaaaaatacaggagtaaactcgtaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaa 19484296  T
Q  198 ctcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  19484295 ctcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaaca 19484244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 8029811 - 8029912
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaa 247  Q
    ||||||||| |||| || |||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||| |||| ||    
T  8029811 gtaaactcggtcgagtttacacgattttaccgagtgttaactcggtcaaactcgtcaaaccttccgattttaccagaaatcgagtttatctcagagttaa 8029910  T
Q  248 ca 249  Q
    ||    
T  8029911 ca 8029912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 31625869 - 31625786
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  31625869 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 31625786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 10294982 - 10295062
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  10294982 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 10295062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 14781772 - 14781855
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  14781772 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 14781855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 26856666 - 26856583
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| ||| |||||||||||||| |||||||||||| |||| ||||    
T  26856666 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttctgattttaccagaaaccgagtttacctcagagttaaca 26856583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 28317075 - 28317138
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||||||||||||||||| |||||| |||| |||||||||||||||||||||    
T  28317075 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagt 28317138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 17234810 - 17234748
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  17234810 gttaactcgagtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagt 17234748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 44725431 - 44725514
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  44725431 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 44725514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 27915551 - 27915636
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    ||||||| |||| || ||||||||| |  ||||||||||||||||||||||||||||| | ||||||||| |||||||||| ||||    
T  27915551 aaactcggtcgagtttacacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaattta 27915636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 150 - 235
Target Start/End: Original strand, 27961970 - 27962055
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    ||||||| |||| || ||||||||| |  ||||||||||||||||||||||||||||| | ||||||||| |||||||||| ||||    
T  27961970 aaactcggtcgagtttacacgagttcatcgagtgttaactcggtcaaactcgtcaaacctaccgattttatcagaaatcgaattta 27962055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 9288138 - 9288217
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||| |||||||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  9288138 gagtatactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 9288217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 233
Target Start/End: Original strand, 12522422 - 12522489
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtt 233  Q
    ||||||||||||  |||||||||||||||||||||||||||| || | ||||||||||||| ||||||    
T  12522422 acacgagtttaccaagtgttaactcggtcaaactcgtcaaacctttcaattttaccagaaaccgagtt 12522489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 18305616 - 18305699
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||| | |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  18305616 acacgagtttaccgagtgttaactcagtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 18305699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 27878607 - 27878706
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || ||||||||| |  ||||||||||||  ||||||||||||||| | |||||||||||||||| ||| ||||| ||||||| ||||    
T  27878607 aaactcggtcgagtttacacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaaca 27878706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 28018788 - 28018887
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || ||||||||| |  ||||||||||||  ||||||||||||||| | |||||||||||||||| ||| ||||| ||||||| ||||    
T  28018788 aaactcggtcgagtttacacgagttcatcgagtgttaactctatcaaactcgtcaaacctaccgattttaccagaaaccgaatttacatccgagttaaca 28018887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 6388131 - 6388197
Alignment:
Q  183 gttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| ||||||||| |||||||||||||||||||||| |||  |||||||||||||||| ||||    
T  6388131 gttaacttggtcaaacttgtcaaactttccgattttaccataaacagagtttacctccgagttaaca 6388197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 39467158 - 39467230
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||| |||||||||||| ||||||||||  |||| |||| ||||||||||||||| | |||||||    
T  39467158 acacgagtttaccgagtgttaactcagtcaaactcgctaaaccttccaattttaccagaaatcaattttacct 39467230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 41252261 - 41252193
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||| ||||||||||||||||||||||| | || ||||||||||||| ||||||| ||||    
T  41252261 gtgttgactcggttaaactcgtcaaactttccgatttcatcaaaaatcgagtttacttccgagttaaca 41252193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 43166316 - 43166376
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    |||||||||||| |||||||||||| |||||||||||||||| || | |||||||||||||    
T  43166316 acacgagtttaccgagtgttaactcagtcaaactcgtcaaacctttcaattttaccagaaa 43166376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 19717514 - 19717597
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||| ||||||| |||||||||||| ||||| ||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  19717514 acacaagtttaccgagtgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 19717597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 42305244 - 42305327
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| || ||||||||| ||||| ||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  42305244 acacgagtttaccgaatgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 42305327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 37131291 - 37131353
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| ||||||||| |||||| ||| ||||||||||||| ||||||||||||||||||    
T  37131291 gttaactcgagtcaaactcttcaaacattctgattttaccagaagtcgagtttacctccgagt 37131353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 43308148 - 43308217
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    |||||||||||| |||||||||||| |||||||| || |||| |||| ||||||||||||| ||| ||||    
T  43308148 acacgagtttaccgagtgttaactcagtcaaacttgttaaaccttccaattttaccagaaaccgatttta 43308217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 16364267 - 16364195
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||| ||||||||| |  ||||||||||| |||| |||||||||||| ||||| ||| |||||||    
T  16364267 acacgagtttaccgagtgttaatttagtcaaactcgttaaaccttccgattttactagaaaccgaatttacct 16364195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 170 - 226
Target Start/End: Original strand, 26620338 - 26620394
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    |||||||  ||||||||||||| |||||||||||||||||| |||||||| ||||||    
T  26620338 gagtttatcgagtgttaactcgatcaaactcgtcaaacttttcgattttatcagaaa 26620394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 198 - 249
Target Start/End: Original strand, 12522528 - 12522579
Alignment:
Q  198 ctcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||| |||||||||||||||||| |||||||||||| |||| ||||    
T  12522528 ctcgtcaaaccttccgattttaccagaaaccgagtttacctctgagttaaca 12522579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 18958367 - 18958450
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||| || || |||| |||| ||||||||||||| | | |||||||| |||| ||||    
T  18958367 acacgagtttaccgagtgttaactcagtcaatcttgttaaaccttccaattttaccagaaaccaattttacctcagagttaaca 18958450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 32498102 - 32498019
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||  |||||||||||  |||||  ||| |||| |||||||||||| ||||| |||||||||||| |||| ||||    
T  32498102 acacgagtttacctagtgttaactcaatcaaatccgttaaaccttccgattttactagaaaccgagtttacctcagagttaaca 32498019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 24067202 - 24067140
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| ||| |||||||||||| | ||||||||||||||||| ||||| ||||||||||    
T  24067202 gttaactcgagtcgaactcgtcaaacatgccgattttaccagaaattgagttcacctccgagt 24067140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 33177851 - 33177908
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||| |||||||||||||||| || | |||| |||| |||||||||||||||    
T  33177851 gtgttaactcagtcaaactcgtcaaacatttcaatttcaccaaaaatcgagtttacct 33177908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 35879775 - 35879722
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    ||||||||| |||||||||||||||| |||| |||||||| |||||||||||||    
T  35879775 gttaactcgagtcaaactcgtcaaacattccaattttaccggaaatcgagttta 35879722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 1527908 - 1527976
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||  | |||||| ||| ||| ||||||||| |||| ||||||||||||||||||||| ||||    
T  1527908 gtgttaacttagccaaacttgtccaacattccgatttcaccaaaaatcgagtttacctccgagttaaca 1527976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 7466882 - 7466799
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  |||||||||||| ||||||||||| || | |||| |||||| ||||||  || |||||||| |||| ||||    
T  7466882 acacgagtttatcgagtgttaactcagtcaaactcgttaagccttccaattttatcagaaactgattttacctcagagttaaca 7466799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 169 - 242
Target Start/End: Complemental strand, 41394065 - 41393992
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    ||||||||| |||||||||  || ||||| | ||||||| || |||||||| ||||||  ||||||||||||||    
T  41394065 cgagtttaccgagtgttaatacgatcaaatttgtcaaacctttcgattttatcagaaactgagtttacctccga 41393992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 170 - 207
Target Start/End: Complemental strand, 42423298 - 42423261
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaac 207  Q
    ||||||||  ||||||||||||||||||||||||||||    
T  42423298 gagtttacccagtgttaactcggtcaaactcgtcaaac 42423261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 202
Target Start/End: Complemental strand, 37857445 - 37857409
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgt 202  Q
    |||||||||||| |||||||||||| |||||||||||    
T  37857445 acacgagtttaccgagtgttaactcagtcaaactcgt 37857409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 153; Significance: 3e-81; HSPs: 50)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 153; E-Value: 3e-81
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 41353723 - 41353471
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggcca----- 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||         
T  41353723 aaaatgatatgaaatgtttcacttcagtaagttgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggccaaaaaa 41353624  T
Q  107 ---------tttttgaagaaaaataa-tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaa 196  Q
             |||||||||||||| || |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  41353623 aatgggccatttttgaagaaaaaaaaatacaggagtaaactcgtaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaa 41353524  T
Q  197 actcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  41353523 actcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaaca 41353471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 11578919 - 11579171
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggc------- 104  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||           
T  11578919 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggcaaaaaaa 11579018  T
Q  105 -------catttttgaagaaaaataa-tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaa 196  Q
           |||||||||||||||| || |||||||||||||||| ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||    
T  11579019 aatgggccatttttgaagaaaaaaaaatacaggagtaaactcgcaaaaacggtgaactcgcccgatttcacacgagtttactgagtgttaactcggtcaa 11579118  T
Q  197 actcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||||| | ||||||||||||| ||||    
T  11579119 actcgtcaaactttccgattttaccagaaatcaaatttacctccgagttaaca 11579171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 13 - 244
Target Start/End: Complemental strand, 26757917 - 26757670
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggcca----- 106  Q
    |||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||||| ||||||||||||       |||||||         
T  26757917 aaaatgatatgaaatgtttcacttgagtaagctgaaacatgttgtaa-gctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggccaaaaac 26757819  T
Q  107 ---------tttttgaagaaaaataa--tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtca 195  Q
             |||||||||||||| ||  |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  26757818 aatgggccatttttgaagaaaaaaaaaatacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtca 26757719  T
Q  196 aactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  26757718 aactcgtcaaactttccgattttaccagaaatcgagtttacctctgagt 26757670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 127; E-Value: 1e-65
Query Start/End: Original strand, 38 - 249
Target Start/End: Complemental strand, 8147593 - 8147367
Alignment:
Q  38 agtaagctgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgnnnnnnntgggcca--------------tttttgaagaaaaataa 123  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||              |||||||||||||| ||    
T  8147593 agtaagctgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgaaaaaaatgggccaaaaacaatgggccatttttgaagaaaaaaaa 8147494  T
Q  124 -tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacca 222  Q
     |||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||||    
T  8147493 atacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttgcaattttacca 8147394  T
Q  223 gaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||| ||||    
T  8147393 gaaatcgagtttacctccgagttaaca 8147367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 4005262 - 4005117
Alignment:
Q  105 catttttgaagaaaaataatacaggagtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtc 203  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  4005262 catttttgaagaaaaaaaatacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtc 4005163  T
Q  204 aaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  4005162 aaactttccgattttaccagaaatcgagtttacctccgagttaaca 4005117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 9192223 - 9192074
Alignment:
Q  101 gggccatttttgaagaaaaataatacaggagtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaact 199  Q
    |||||||||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  9192223 gggccatttttgaagaaaaaaaatacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaact 9192124  T
Q  200 cgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||||    
T  9192123 cgtcaaactttctgattttaccagaaatcgagtttacctccgagttaaca 9192074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 51107091 - 51106942
Alignment:
Q  101 gggccatttttgaagaaaaataatacaggagtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaact 199  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  51107091 gggccatttttgaagaaaaaaaatataggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaact 51106992  T
Q  200 cgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||| ||||||||| ||||    
T  51106991 cgtcaaactttccgattttaccagaaatcgagttttcctccgagttaaca 51106942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 38 - 249
Target Start/End: Original strand, 1243150 - 1243377
Alignment:
Q  38 agtaagctgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgnnnnnnntgggcca--------------tttttgaagaaaaataa 123  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||| |||||       |||||||              ||||| |||||||| ||    
T  1243150 agtaagctgaaacatgttgtaaagctagaaagtaaatatgtttcatttgagcttgaaaaaaatgggccaaaaacaatgggacattttttaagaaaaaaaa 1243249  T
Q  124 --tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacc 221  Q
      ||||||||||||||||  |||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1243250 aatacaggagtaaactcgctaaaacggtaaactcgcccgatttcacatgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacc 1243349  T
Q  222 agaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||| ||||    
T  1243350 agaaatcgagtttacctccgagttaaca 1243377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 47371547 - 47371646
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || |||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  47371547 aaactcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcggcaaaccttccgattttaccagaaatcgagtttacctccgagttaaca 47371646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 131 - 242
Target Start/End: Original strand, 42304452 - 42304564
Alignment:
Q  131 gtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcg 229  Q
    ||||||||||||||  | ||||||||| |||| || ||||||||||||  ||||||||||||||||||||||| |||| |||| ||||||||||||| ||    
T  42304452 gtaaactcgtaaaactcagtaaactcggtcgagtttacacgagtttacctagtgttaactcggtcaaactcgttaaaccttccaattttaccagaaaccg 42304551  T
Q  230 agtttacctccga 242  Q
    |||||||||||||    
T  42304552 agtttacctccga 42304564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 45273127 - 45273044
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||| |||||||||||| |||| ||||    
T  45273127 acacgagtttaccgagtgttaactcagtcaaactcgtcaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 45273044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 160 - 249
Target Start/End: Original strand, 5209350 - 5209439
Alignment:
Q  160 gatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| |||| |||||| |||||||||||||| ||||||||||||||||||| ||||| ||||||||||||||| |||||||||| ||||    
T  5209350 gattttacacaagtttattgagtgttaactcgatcaaactcgtcaaactttctgatttcaccagaaatcgagttgacctccgagttaaca 5209439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 32760069 - 32760170
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaa 247  Q
    ||||||||| |||| || ||||||||||| ||||||||||||||||||||||||| || | | |||||||||| ||||| |||||||||||| |||| ||    
T  32760069 gtaaactcgatcgagtttacacgagtttagtgagtgttaactcggtcaaactcgttaagcctcccgattttactagaaaccgagtttacctcagagttaa 32760168  T
Q  248 ca 249  Q
    ||    
T  32760169 ca 32760170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 49453048 - 49453131
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| ||||||||||||||||||||| ||||||| ||  |||||| |||||||||||||||||||| |||| ||||    
T  49453048 acacgagtttaccgagtgttaactcggtcaaacttgtcaaaccttatgatttttccagaaatcgagtttacctcagagttaaca 49453131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 35177201 - 35177271
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    ||||||||  ||||||||||||||||||||||||||| | ||||||||||| |||||||||||||||||||    
T  35177201 cgagtttatcgagtgttaactcggtcaaactcgtcaatccttccgattttatcagaaatcgagtttacctc 35177271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 171 - 236
Target Start/End: Original strand, 3583549 - 3583614
Alignment:
Q  171 agtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 236  Q
    ||||||| ||||||||||||||| |||||||||||||||||||||||||| ||||| |||||||||    
T  3583549 agtttaccgagtgttaactcggttaaactcgtcaaactttccgattttactagaaaccgagtttac 3583614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 7798618 - 7798550
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||    
T  7798618 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 7798550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 33886863 - 33886931
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||    
T  33886863 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 33886931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 33957387 - 33957319
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||    
T  33957387 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 33957319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 34019237 - 34019169
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||||||| ||||||||||||| ||||    
T  34019237 gtgttaactcggtcaacctcgtcaaactttccgatttcaccaaaaatcgaatttacctccgagttaaca 34019169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 48966462 - 48966562
Alignment:
Q  149 taaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaac 248  Q
    |||||||| | || || |||||||||||| |||| |||||||||||||||||||||||| |||| |||| | |||||||| |||||||||| |||| |||    
T  48966462 taaactcggtagagtttacacgagtttaccgagtattaactcggtcaaactcgtcaaaccttccaatttcatcagaaatcaagtttacctcagagttaac 48966561  T
Q  249 a 249  Q
    |    
T  48966562 a 48966562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 5494736 - 5494819
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  |||||||||||| ||||||||| |||||| ||| |||||||||||||| |||||||||||| |||| ||||    
T  5494736 acacgagtttatcgagtgttaactcagtcaaactcatcaaaccttctgattttaccagaaaccgagtttacctcagagttaaca 5494819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 6313136 - 6313053
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  6313136 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 6313053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 15834672 - 15834755
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||| ||||||| |||||||| |||| ||||    
T  15834672 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaaca 15834755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 25612652 - 25612569
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  25612652 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 25612569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 29396072 - 29396155
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  29396072 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 29396155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 46328546 - 46328463
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| ||||||||||||  |||||||||| |||| ||||||||||| |||||| |||||||||||| |||| ||||    
T  46328546 acacgagtttaccgagtgttaactcaatcaaactcgttaaaccttccgattttaacagaaaccgagtttacctcagagttaaca 46328463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 134 - 239
Target Start/End: Complemental strand, 25253659 - 25253553
Alignment:
Q  134 aactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagt 232  Q
    |||||||||||  ||||||||||| |||| || ||| |||||||| || ||||||||| |||||||||||||||  |||||| ||||||||||| ||| |    
T  25253659 aactcgtaaaactcggtaaactcgatcgagtttacaagagtttaccgaatgttaactcagtcaaactcgtcaaatcttccgagtttaccagaaaccgaat 25253560  T
Q  233 ttacctc 239  Q
    |||||||    
T  25253559 ttacctc 25253553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 1108468 - 1108407
Alignment:
Q  183 gttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||| |||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  1108468 gttaactcagtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagt 1108407  T

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Target: chr1; HSP #30
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 8147644 - 8147592
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctag 65  Q
    |||||||||||||||||||||||| |||||| |||||||||||||||||||||    
T  8147644 aaaatgatatgaaatgtttcacttaagtaagttgaaacgtgttgtaaagctag 8147592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 34751575 - 34751643
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||| | ||||||||||||||| |||| ||| ||||||||||||||||| ||||    
T  34751575 gtgttaactcggtcaaacttggcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 34751643  T

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Target: chr1; HSP #32
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 48177080 - 48177140
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||| |||||||||||||    
T  48177080 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaa 48177140  T

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Target: chr1; HSP #33
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 1243100 - 1243151
Alignment:
Q  14 aaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctag 65  Q
    |||| ||||||||||||||||||||||||||||||||| |||||||||||||    
T  1243100 aaataatatgaaatgtttcacttcagtaagctgaaacgagttgtaaagctag 1243151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 249
Target Start/End: Complemental strand, 15927416 - 15927349
Alignment:
Q  182 tgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||||||||||||||||||| |||||| ||| |||||||| |||| ||||    
T  15927416 tgttaactcagtcaaactcgtcaaactttccgattttatcagaaaccgaatttacctcagagttaaca 15927349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 18799012 - 18798929
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||| ||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  18799012 acacgagtttaccgagtgttaactcagtcaatctcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 18798929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 38535784 - 38535867
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| ||   |||||||||||||||||| | |||||||||| |||| ||||    
T  38535784 acacgagtttaccgagtgttaactcagtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaaca 38535867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 38558002 - 38558085
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| ||   |||||||||||||||||| | |||||||||| |||| ||||    
T  38558002 acacgagtttaccgagtgttaactcagtcaaactcgttaagtcttccgattttaccagaaacccagtttacctcagagttaaca 38558085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 148 - 238
Target Start/End: Original strand, 28403916 - 28404006
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    ||||||||| |||| || ||| |||||||| ||||||||||||||||||| ||||||||| || ||||||||  ||||| ||| |||||||    
T  28403916 gtaaactcggtcgagtttacatgagtttaccgagtgttaactcggtcaaattcgtcaaacatttcgattttattagaaaccgaatttacct 28404006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 8140871 - 8140954
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||| ||||||| |||||||||||| ||||||||| | |||| |||  ||||||||||||||||| |||||||| |||| ||||    
T  8140871 acacaagtttaccgagtgttaactcagtcaaactcattaaaccttctaattttaccagaaatcgattttacctcagagttaaca 8140954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 49231567 - 49231484
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||| ||||||| || ||||||||  ||||||||||| |||| |||||||| ||||||||| |||||||||||| |||| ||||    
T  49231567 acacaagtttaccgattgttaacttagtcaaactcgttaaaccttccgattataccagaaaccgagtttacctcagagttaaca 49231484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 51702155 - 51702072
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| ||   ||||||||||||| ||| |||||||| |||| ||||    
T  51702155 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttttaattttaccagaaaccgattttacctcagagttaaca 51702072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 29219681 - 29219611
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 236  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| |||| |||||||| ||| |||||    
T  29219681 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaatttcaccagaaaccgattttac 29219611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 219
Target Start/End: Original strand, 25830887 - 25830940
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgatttta 219  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||| ||||||    
T  25830887 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccaatttta 25830940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 186 - 242
Target Start/End: Original strand, 49236974 - 49237030
Alignment:
Q  186 aactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    |||||||||||||||||||||| || ||||||||||||||| |||| ||| ||||||    
T  49236974 aactcggtcaaactcgtcaaacctttcgattttaccagaaaccgagcttaactccga 49237030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 242
Target Start/End: Complemental strand, 52182443 - 52182383
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    ||||||||| ||| |||||||||||| || ||||||||||||||||||| |||||||||||    
T  52182443 gttaactcgagtcgaactcgtcaaacatttcgattttaccagaaatcgaatttacctccga 52182383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 49971599 - 49971662
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaa-actttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| |||||||||||||| || || ||||||||||||||| |||||||||||||||||    
T  49971599 gttaactcgagtcaaactcgtcaacacatttcgattttaccagaaaacgagtttacctccgagt 49971662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 187 - 249
Target Start/End: Complemental strand, 3593358 - 3593296
Alignment:
Q  187 actcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| ||||| ||||||| |||||||||||  ||||||||| ||||||||||||| ||||    
T  3593358 actcggttaaacttgtcaaaccttccgattttattagaaatcgaatttacctccgagttaaca 3593296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 27257872 - 27257924
Alignment:
Q  192 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||| |||||||||||||  ||||| |||||||||| ||||    
T  27257872 gtcaaactcgtcaaacattccgattttaccgaaaatcaagtttacctcggagt 27257924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 18954563 - 18954515
Alignment:
Q  201 gtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||| |||| ||| ||||||||| ||||||| ||||    
T  18954563 gtcaaactttccgatttcaccaaaaaccgagtttacgtccgagttaaca 18954515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 166 - 218
Target Start/End: Original strand, 28387093 - 28387145
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgatttt 218  Q
    |||||||||||| |||||||||||| ||||||||| | |||| |||| |||||    
T  28387093 acacgagtttaccgagtgttaactcagtcaaactcattaaacattccaatttt 28387145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 5e-74; HSPs: 46)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 4639693 - 4639945
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggcca----- 106  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||         
T  4639693 aaaatgatatgaaatgtttcacttcagtaagttgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggccaaaaac 4639792  T
Q  107 ---------tttttgaag-aaaaataatacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaa 196  Q
             ||||||||| ||||| |||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  4639793 aatgggccatttttgaaggaaaaaaaatacaggagtaaactcgtaaaaacggtaaactcgcccgatttcacatgagtttactgagtgttaactcggtcaa 4639892  T
Q  197 actcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||| |||||||||||||||||||| |||||||||||||||| ||||    
T  4639893 actcgtcaaaatttccgattttaccagaaatagagtttacctccgagttaaca 4639945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 38 - 249
Target Start/End: Complemental strand, 14741681 - 14741455
Alignment:
Q  38 agtaagctgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgnnnnnnntgggcca--------------tttttgaagaaaaataa 123  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |||||||              |||||||||||||| ||    
T  14741681 agtaagcttaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgaaaaaaatgggccaaaaacaatgggccatttttgaagaaaaaaaa 14741582  T
Q  124 -tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacca 222  Q
     ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  14741581 atactggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacta 14741482  T
Q  223 gaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||| ||||    
T  14741481 gaaatcgagtttacctccgagttaaca 14741455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 100 - 199
Target Start/End: Original strand, 37915825 - 37915926
Alignment:
Q  100 tgggccatttttgaagaaaaataa--tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaa 197  Q
    ||||||||||||||||||||| ||  |||||||||||||||  ||||||||||||||||| | |||||||||||||||||||||||||||||||||||||    
T  37915825 tgggccatttttgaagaaaaaaaaaatacaggagtaaactcacaaaaacggtaaactcgcccaatttcacacgagtttactgagtgttaactcggtcaaa 37915924  T
Q  198 ct 199  Q
    ||    
T  37915925 ct 37915926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 42610765 - 42610656
Alignment:
Q  131 gtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcg 229  Q
    ||||||||||||||  ||||||||||  |||| || ||||||||||||  |||||||||||||||||||||||||||| ||| |||||||||||||| |     
T  42610765 gtaaactcgtaaaactcggtaaactcaatcgaatttacacgagtttacccagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaacca 42610666  T
Q  230 agtttacctc 239  Q
    ||||||||||    
T  42610665 agtttacctc 42610656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 166 - 236
Target Start/End: Complemental strand, 21067939 - 21067869
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 236  Q
    |||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||    
T  21067939 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttac 21067869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 44256406 - 44256484
Alignment:
Q  171 agtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||||    
T  44256406 agtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaaca 44256484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 23017101 - 23017021
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| ||||||||||||||||||||||||||||  |||| ||||||| ||||||||||||||||||| ||| ||||    
T  23017101 cgagtttaccgagtgttaactcggtcaaactcgtcaaatcttccaattttacgagaaatcgagtttacctccaagttaaca 23017021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 37328466 - 37328394
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||| |||||||||||| ||||||| ||| |||| ||||||||||||||||||||||||||||||    
T  37328466 acacgagtttaccgagtgttaactcagtcaaacacgttaaaccttccgattttaccagaaatcgagtttacct 37328394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 7993716 - 7993643
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||| ||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||| ||||||||||||    
T  7993716 acaccagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctc 7993643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 21024163 - 21024095
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| ||||||||||| ||||| ||||    
T  21024163 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttaccttcgagttaaca 21024095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 510205 - 510122
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  510205 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 510122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 11735194 - 11735261
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||| ||||| |||||||||||||||||||||||||||||||||||| ||||    
T  11735194 gttaactcgagtcaaactcggcaaacattccgattttaccagaaatcgagtttacctccgagttaaca 11735261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 28342870 - 28342787
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  28342870 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 28342787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 39784666 - 39784583
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  39784666 acacgagtttaccgagtgttaactctgtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 39784583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 40460360 - 40460443
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||| |||||||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  40460360 acacgagtatactgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 40460443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 14732298 - 14732366
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||| | ||||||||||||||| ||||    
T  14732298 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaaccaagtttacctccgagttaaca 14732366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 35313654 - 35313586
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||| |||||||||||||||| |||| ||| ||| ||||||||||||| ||||    
T  35313654 gtgttaactcggtcaaactcatcaaactttccgatttcaccaaaaaccgaatttacctccgagttaaca 35313586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 240
Target Start/End: Complemental strand, 19594307 - 19594248
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctcc 240  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||| ||||    
T  19594307 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttatctcc 19594248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 29586073 - 29585990
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||| | |||| ||||||||||||| |||| ||| |||||||| |||| ||||    
T  29586073 acacgagtttaccgagtgttaactcagtcaaactcattaaaccttccgattttacccgaaaccgactttacctcagagttaaca 29585990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 29614441 - 29614524
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| || | ||||||||||||| ||| |||||||| |||| ||||    
T  29614441 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaaca 29614524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 29893531 - 29893448
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| || |||||| ||||||||  ||||||||||| |||| ||||    
T  29893531 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcgatttcaccagaaactgagtttacctcagagttaaca 29893448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 30823197 - 30823114
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| ||||||||||||  ||||||||||  ||| |||||||||||| ||||| |||||||||||| |||| ||||    
T  30823197 acacgagtttaccgagtgttaactcaatcaaactcgttgaaccttccgattttactagaaaccgagtttacctcagagttaaca 30823114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 47067269 - 47067186
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| || | ||||||||||||||||| |||| ||| |||| ||||    
T  47067269 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaatcgattttatctcagagttaaca 47067186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 244
Target Start/End: Complemental strand, 39028646 - 39028568
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||||||||||||||||||| ||||||||||| |||  |||| ||| ||||||||| ||| |||||||| ||||    
T  39028646 acacgagtttactgagtgttaactcagtcaaactcgttaaatcttccaattgtaccagaaaccgattttacctcagagt 39028568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 3023493 - 3023420
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| |||||| |||||| ||| ||||||||    
T  3023493 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctc 3023420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 8675891 - 8675818
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccga-ttttaccagaaatcgagtttacct 238  Q
    |||||||||||  |||||||||||| |||||||||||||||| || ||| |||||||||||| |||||||||||    
T  8675891 acacgagtttatcgagtgttaactcagtcaaactcgtcaaacctttcgatttttaccagaaaccgagtttacct 8675818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Complemental strand, 14741733 - 14741680
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaa-cgtgttgtaaagctag 65  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  14741733 aaaatgatatgaaatgtttcacttcagtaagctgaaaccgtgttgtaatgctag 14741680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 44121579 - 44121652
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    ||||||||||||  ||||||||||| ||||||||||| || | |||||||||||||||||| ||| ||||||||    
T  44121579 acacgagtttaccaagtgttaactcagtcaaactcgttaagccttccgattttaccagaaaccgaatttacctc 44121652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 21486254 - 21486182
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||| ||||||||||||| |||||||| |||||| |||  ||||||||| || ||||||||||||    
T  21486254 acacgagtttaccgagtgttaactcgatcaaactcatcaaaccttctaattttaccaaaattcgagtttacct 21486182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 23101850 - 23101790
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| |||||||||||||    
T  23101850 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaa 23101790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 244
Target Start/End: Original strand, 33497107 - 33497159
Alignment:
Q  192 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||| |||| |||||| ||||||||||||||||||||||||    
T  33497107 gtcaaactcgtcaaacattccaattttatcagaaatcgagtttacctccgagt 33497159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 166 - 238
Target Start/End: Original strand, 33891880 - 33891952
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    ||||||||||| ||||||||||||| |||||| |||| |||| |||| ||||||||||||| ||| |||||||    
T  33891880 acacgagtttattgagtgttaactcagtcaaattcgttaaaccttccaattttaccagaaaccgattttacct 33891952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 12740929 - 12740846
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||| ||||| ||||| |||||  |||||||||||||||| |||| ||||||||||| | |||||||||||| |||| ||||    
T  12740929 acacgactttaccgagtgctaacttagtcaaactcgtcaaaccttccaattttaccagacaccgagtttacctcagagttaaca 12740846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 18838969 - 18838886
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| || ||||||||  ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  18838969 acacgagtttaccgaatgttaacttagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 18838886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 38910578 - 38910515
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||| |||||||||||||||||||| |||| ||| |||| |||||| |||||    
T  38910578 gtgttaactcggtcaatctcgtcaaactttccgatttcaccaaaaaccgagcttaccttcgagt 38910515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 41827887 - 41827804
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| |||||||| || |||  ||| ||||||||||||||  ||||||||||| |||| ||||    
T  41827887 acacgagtttaccgagtgttaactcagtcaaacttgttaaatcttctgattttaccagaaactgagtttacctcagagttaaca 41827804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 48136874 - 48136957
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||| ||||  |||||||||||| |||||||||||||||| |||  |||||||||||||  ||||||||||| |||| ||||    
T  48136874 acacgaatttatcgagtgttaactcagtcaaactcgtcaaaccttctaattttaccagaaactgagtttacctcagagttaaca 48136957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 238
Target Start/End: Original strand, 1254471 - 1254528
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||||||||||| ||||||  |||||||| |||| |||||||||||||||    
T  1254471 gtgttaactcggtcaaactcatcaaacagtccgatttcaccaaaaatcgagtttacct 1254528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 34656702 - 34656641
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||| ||| ||||| |||||    
T  34656702 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgaatttacttccga 34656641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 28034498 - 28034577
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||  ||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| ||||| || |||| ||||    
T  28034498 gagtttaccaagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacatcagagttaaca 28034577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 37972523 - 37972606
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||  |||| |||||| |||||| |||| |||| ||||||||||||||||||  ||||||| ||| |||| ||||    
T  37972523 acacgagtttaccaagtgctaactcagtcaaattcgttaaaccttccgattttaccagaaactgagtttatctcagagttaaca 37972606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 26201794 - 26201856
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| |||||||||||||||| ||||||||||| ||  ||| ||||||||||||||||    
T  26201794 gttaactcgagtcaaactcgtcaaacattccgattttagcaataattgagtttacctccgagt 26201856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 16709534 - 16709489
Alignment:
Q  177 ctgagtgttaactcggtcaaactcgtcaaactttccgattttacca 222  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||||    
T  16709534 ctgagtgttaactcggtcaaacttgtcaaaccttccgagtttacca 16709489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 177 - 222
Target Start/End: Complemental strand, 17683770 - 17683725
Alignment:
Q  177 ctgagtgttaactcggtcaaactcgtcaaactttccgattttacca 222  Q
    ||||||||||||||||||||||| ||||||| |||||| |||||||    
T  17683770 ctgagtgttaactcggtcaaacttgtcaaaccttccgagtttacca 17683725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 212 - 249
Target Start/End: Complemental strand, 43172220 - 43172183
Alignment:
Q  212 cgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||| ||||    
T  43172220 cgattttaccagaaatcgagtttacctccgagttaaca 43172183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 6268598 - 6268530
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||| |||  |||| |||| ||| | ||||||| ||||||| ||||    
T  6268598 gtgttaactcggtcaaactcgtcaaacattctaatttcaccaaaaacctagtttacatccgagttaaca 6268530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 141; Significance: 5e-74; HSPs: 40)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 141; E-Value: 5e-74
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 49296396 - 49296145
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggcca----- 106  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||       |||||||         
T  49296396 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaa-gctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggccaaaaac 49296298  T
Q  107 ---------tttttgaagaaaaataa-tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaa 196  Q
             |||||||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  49296297 aatgggccatttttgaagaaaaaaaaatacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaa 49296198  T
Q  197 actcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||| ||||    
T  49296197 actcgtcaaacttttcgattttaccagaaatcgagtttacctccgagttaaca 49296145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 134; E-Value: 7e-70
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 53836240 - 53835991
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggcca----- 106  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||       |||||||         
T  53836240 aaaatgatatgaaatgtttcacttcagtaagcttaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggccaaaaca 53836141  T
Q  107 --------tttttgaagaaaaataatacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaac 198  Q
            |||||||||||||| || ||||||||||||||| ||||||||| |||| || ||||||||||||||||||||||||||||||||||||||||    
T  53836140 atgggccatttttgaagaaaaaaaa-acaggagtaaactcgcaaaaacggttaacttgcccgatttcacacgagtttactgagtgttaactcggtcaaac 53836042  T
Q  199 tcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||| ||||||||||| ||| ||||    
T  53836041 tcgtcaaactttccgattttaccagaaatcaagtttacctccaagttaaca 53835991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 124; E-Value: 7e-64
Query Start/End: Original strand, 13 - 236
Target Start/End: Original strand, 22489317 - 22489543
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgnnnnnnntgggccatttttg 112  Q
    |||||| ||||||||||||||||| |||||||| |||||||||||||| |||||||||| | | ||||||||||||||||       |||||||||||||    
T  22489317 aaaatgctatgaaatgtttcactttagtaagctaaaacgtgttgtaaatctagaaagtagaaaggtttcatttgggcttgaaaaaaatgggccatttttg 22489416  T
Q  113 aaga---aaaataatacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactt 209  Q
    || |   |||| |||| |||||||| || | ||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||| |||| |    
T  22489417 aaaagaaaaaaaaatataggagtaacctagcaaaaacggtaaactcgctcgacttcatacgagtttactgagtgttaactcggtcaaactcgttaaacct 22489516  T
Q  210 tccgattttaccagaaatcgagtttac 236  Q
    |||||||||||||||||||||||||||    
T  22489517 tccgattttaccagaaatcgagtttac 22489543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 101 - 249
Target Start/End: Complemental strand, 8598837 - 8598688
Alignment:
Q  101 gggccatttttgaagaaaaataatacaggagtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaact 199  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  8598837 gggccatttttgaagaaaaaaaatataggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaact 8598738  T
Q  200 cgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  8598737 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaaca 8598688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 33693384 - 33693285
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || |||||||||||| ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||| ||||    
T  33693384 aaactcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaatcgagtttacctccaagttaaca 33693285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 49458486 - 49458387
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || |||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||||| || |||| ||||    
T  49458486 aaactcggtcgagtttacacgagtttactgagtgttaatttggtcaaactcgtcaaaccttccgattttaccagaaatcgagtttacttcagagttaaca 49458387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 150 - 249
Target Start/End: Complemental strand, 16155292 - 16155193
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || |||||||||||||||||||||||||||||||||||||||||| |||| |||||| || ||| |||||||||||| |||| ||||    
T  16155292 aaactcggtcgagtttacacgagtttactgagtgttaactcggtcaaactcgtcaaaccttccaattttatcaaaaaccgagtttacctcagagttaaca 16155193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 21386476 - 21386546
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    ||||||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  21386476 cgagtttaccgagtgtcaactcggtcaaactcgtcaaacttttcgattttaccagaaatcgagtttacctc 21386546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 149 - 249
Target Start/End: Original strand, 4962703 - 4962803
Alignment:
Q  149 taaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaac 248  Q
    |||||||| |||| || ||| |||||||| ||||||||||||||||||||||||||||| || |||||||||  |||||||||||||||||| ||| |||    
T  4962703 taaactcggtcgagtttacatgagtttaccgagtgttaactcggtcaaactcgtcaaacctttcgattttacttgaaatcgagtttacctccaagttaac 4962802  T
Q  249 a 249  Q
    |    
T  4962803 a 4962803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 26107888 - 26107805
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||||||| |||||||||||||||||||||| |||| ||||    
T  26107888 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattgtaccagaaatcgagtttacctcagagttaaca 26107805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 48379709 - 48379636
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||||| |||||||||||| ||||||||||| || | |||||||||||||||||||||||||||||||    
T  48379709 acacgagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttaccagaaatcgagtttacctc 48379636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 9818568 - 9818636
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  9818568 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaaca 9818636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 20833456 - 20833373
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||  ||||||||||| |||| ||||    
T  20833456 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaactgagtttacctcagagttaaca 20833373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 50902950 - 50903033
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| |||||||||||| |||| ||||    
T  50902950 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaaca 50903033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 39038646 - 39038566
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||  ||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  39038646 cgagtttaccgagtgttaacttagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 39038566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 7665720 - 7665620
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtga 246  Q
    ||||||||| |||| || |||||||||||| ||||  ||||||  |||||||||||||||  |||||||||||||| ||||||||||||||||||||| |    
T  7665720 gtaaactcggtcgagtttacacgagtttaccgagt--taactctagtcaaactcgtcaaatattccgattttaccaaaaatcgagtttacctccgagtta 7665623  T
Q  247 aca 249  Q
    |||    
T  7665622 aca 7665620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 37455406 - 37455323
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||| ||||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  37455406 acacgagtttagtgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 37455323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 52810917 - 52810834
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||| ||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||  |||||||||||| |||| ||||    
T  52810917 acacaagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaacccgagtttacctcagagttaaca 52810834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 171 - 249
Target Start/End: Original strand, 51737333 - 51737411
Alignment:
Q  171 agtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||||||||||| ||||||||||| |||| |||||||||||| ||||| |||||||||||| |||| ||||    
T  51737333 agtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttactagaaaccgagtttacctcagagttaaca 51737411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 152 - 241
Target Start/End: Original strand, 7437546 - 7437635
Alignment:
Q  152 actcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccg 241  Q
    ||||| |||| || |||||||||||| ||||||||||||||||||||||  || || |||||||||||||| ||| |||||||| |||||    
T  7437546 actcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcaccataccttccgattttaccaaaaaccgagtttatctccg 7437635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 18750199 - 18750119
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||| ||||||||||| || | |||| ||||||||||||| |||||||||||| |||| ||||    
T  18750199 cgagtttaccgagtgttaactcagtcaaactcgttaagccttccaattttaccagaaaccgagtttacctcagagttaaca 18750119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 31645902 - 31645985
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||| | |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  31645902 acacgagtttaccgagtgttaactcagtcaaactctttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 31645985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 34483739 - 34483822
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||  ||||||||||||| ||| |||||||| |||| ||||    
T  34483739 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttcaaattttaccagaaaccgattttacctcagagttaaca 34483822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 36673793 - 36673876
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  36673793 acacgagtttatcgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 36673876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 40897690 - 40897607
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| |||||| |||||| ||| |||||||| |||| ||||    
T  40897690 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaaca 40897607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 54629410 - 54629327
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||   |||||||||| |||| || || ||||| ||||||||||||||||||| |||| ||||    
T  54629410 acacgagtttactgagtgttaactgaatcaaactcgttaaacctttcgcttttatcagaaatcgagtttacctcagagttaaca 54629327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 25049967 - 25049905
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| ||||||||| |||||| |||||||||||| |||||||||||||||||||||||    
T  25049967 gttaactcgagtcaaactcatcaaacattccgattttactagaaatcgagtttacctccgagt 25049905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 181 - 235
Target Start/End: Complemental strand, 49293900 - 49293846
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    ||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||    
T  49293900 gtgttaattcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagttta 49293846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 52617626 - 52617696
Alignment:
Q  179 gagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  ||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  52617626 gagtgttaacttagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 52617696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 47467415 - 47467483
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||| ||| |||||| |||| ||| ||||||||||| ||||| ||||    
T  47467415 gtgttaactcggtcaaactcgtcaaaattttcgatttcaccaaaaaccgagtttaccttcgagttaaca 47467483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 17946780 - 17946704
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| ||||||||||||    |||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  17946780 cgagtttaccgagtgttaactc----aaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 17946704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 23753030 - 23753113
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| |||||||| || |||| |||| ||||||||| ||| ||| |||||||| |||| ||||    
T  23753030 acacgagtttaccgagtgttaactcagtcaaactggttaaaccttccaattttaccaaaaaccgattttacctcagagttaaca 23753113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 181 - 236
Target Start/End: Complemental strand, 27261490 - 27261435
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 236  Q
    |||||||||| |||||| ||||||||||||||||||| |||| |||||||||||||    
T  27261490 gtgttaactcagtcaaattcgtcaaactttccgatttcaccaaaaatcgagtttac 27261435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 50761741 - 50761824
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||  ||||||||||| ||||||||||| |||| |||| |||| |||||||||| | |||||||| |||| ||||    
T  50761741 acacgagtttacctagtgttaactcagtcaaactcgttaaaccttccaatttcaccagaaatctattttacctcagagttaaca 50761824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 195 - 249
Target Start/End: Complemental strand, 43173010 - 43172956
Alignment:
Q  195 aaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||| |||||| || ||||||||||||||||||||||||||||||||| ||||    
T  43173010 aaactcttcaaacctttcgattttaccagaaatcgagtttacctccgagtcaaca 43172956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 45602422 - 45602484
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| |||||||||||||||| || |||||||||||||||| |||||||||| |||||    
T  45602422 gttaactcgagtcaaactcgtcaaacatttcgattttaccagaaattgagtttacctacgagt 45602484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 226
Target Start/End: Complemental strand, 42736416 - 42736359
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    ||||||||| || |||||||||| ||||||||||||||||||  ||||||||||||||    
T  42736416 cgagtttaccgaatgttaactcgatcaaactcgtcaaactttttgattttaccagaaa 42736359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 168 - 239
Target Start/End: Original strand, 44905498 - 44905569
Alignment:
Q  168 acgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||| |||||||||||| |||||| |||| || | ||| |||||||||||||| |||| |||||||    
T  44905498 acgagtttaccgagtgttaactcagtcaaattcgttaagccttctgattttaccagaaaccgagattacctc 44905569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 37832669 - 37832628
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttacca 222  Q
    ||||||||||||||||||||||||||||||| ||||| ||||    
T  37832669 gtgttaactcggtcaaactcgtcaaactttctgatttcacca 37832628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 53645332 - 53645380
Alignment:
Q  196 aactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||||||||| |||| |||  ||||||||||| ||||    
T  53645332 aactcgtcaaactttccgatttcaccaaaaactgagtttacctctgagt 53645380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 138; Significance: 3e-72; HSPs: 25)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 13 - 249
Target Start/End: Original strand, 28622987 - 28623239
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgnnnnnnn------------- 99  Q
    |||||||||||||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||                        
T  28622987 aaaatgatatgaaatgtttcacttaagtaagttgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgaaaaaaaatgggccaaaaac 28623086  T
Q  100 --tgggccatttttgaagaaaaataa-tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaa 196  Q
      ||||||||||||||||||||| || |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  28623087 aatgggccatttttgaagaaaaaaaaatacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaa 28623186  T
Q  197 actcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||| ||||    
T  28623187 actcgtcaaactttgcaattttaccagaaatcgagtttatctccgagttaaca 28623239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 101 - 249
Target Start/End: Original strand, 7125088 - 7125237
Alignment:
Q  101 gggccatttttgaagaaaaataatacaggagtaaactcgtaaaa-acggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaact 199  Q
    |||||||||||||||||||| |||| ||||||||||||| |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  7125088 gggccatttttgaagaaaaaaaatataggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaact 7125187  T
Q  200 cgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  7125188 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaaca 7125237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 13 - 238
Target Start/End: Original strand, 37797938 - 37798181
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnntgggccat---- 107  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||       |||||||         
T  37797938 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttttcatttgggcttgaaaaaaatgggccaaaaac 37798037  T
Q  108 ---------ttttgaaga----aaaataatacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtc 194  Q
             |||||||||    |||| |||||||||||||||||  |||||| |||||||| | ||||||||||||||||||| ||||||||||||||||    
T  37798038 aatgggccattttgaagagaaaaaaaaaatacaggagtaaactcacaaaaacagtaaactcacccgatttcacacgagtttaccgagtgttaactcggtc 37798137  T
Q  195 aaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||||||| |||||||||||||||| ||||||||||    
T  37798138 aaactcgtcaaacttttcgattttaccagaaattgagtttacct 37798181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 148 - 249
Target Start/End: Original strand, 5651158 - 5651259
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaa 247  Q
    |||||||||  |||||| ||||||||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||||||||||||||| ||    
T  5651158 gtaaactcggccgattttacacgagtttactgagtgttaactcggtcaaactcgtcaaacttttcaatttcaccagaaatcgagtttacctccgagttaa 5651257  T
Q  248 ca 249  Q
    ||    
T  5651258 ca 5651259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 21238763 - 21238831
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||| ||||    
T  21238763 gtgttaactcggtcaaactcgtcaaactttccgattttaccaaaaaccgagtttacctccgagttaaca 21238831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 2675078 - 2675146
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||||||||||||||||||||| ||||    
T  2675078 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaatcgagtttacctccgagttaaca 2675146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 33892846 - 33892914
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| | || ||||||||||||||||||||| ||||    
T  33892846 gtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaatcgagtttacctccgagttaaca 33892914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 1460790 - 1460870
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||| ||||||||||| || | |||||||||||||||||| |||||||||||| |||| ||||    
T  1460790 cgagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttaccagaaaccgagtttacctctgagttaaca 1460870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 4240107 - 4240190
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||  ||||||||||| |||| ||||||||||||||||||  ||||||||||| |||| ||||    
T  4240107 acacgagtttaccgagtgttaactttgtcaaactcgttaaaccttccgattttaccagaaacggagtttacctcagagttaaca 4240190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 37014415 - 37014332
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||||||||||||||| |||| || | ||||||||||||| ||| |||||||| |||| ||||    
T  37014415 acacgagtttaccgagtgttaactcggtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaaca 37014332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 39852931 - 39852848
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||| ||||||| |||||||| |||| ||||    
T  39852931 acacgagtttaccgagtgttaactccgtcaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaaca 39852848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 5949672 - 5949589
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| |||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  5949672 acacgtgtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 5949589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 1151932 - 1152005
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| || |||||    
T  1151932 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgatttcacctc 1152005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 166 - 235
Target Start/End: Original strand, 13999735 - 13999804
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| ||||    
T  13999735 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgatttta 13999804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 4549899 - 4549982
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||| | |||| ||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  4549899 acacgagtttgcagagtattaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 4549982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 13926492 - 13926409
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||  ||||||||| | |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  13926492 acacgagtttaccgagtgttaacttagtcaaactccttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 13926409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 29716780 - 29716863
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||  |||||| || || || |||||||||||| ||| |||||||||||||||| ||||||||| ||||| ||||    
T  29716780 acacgagtttaccaagtgttcacccgatccaactcgtcaaaccttctgattttaccagaaatcaagtttaccttcgagttaaca 29716863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 132 - 198
Target Start/End: Complemental strand, 34218607 - 34218540
Alignment:
Q  132 taaactcgtaaaa-acggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaac 198  Q
    ||||||||||||| |||||||||||| |||| || |||||| |||||||||| |||||||||||||||    
T  34218607 taaactcgtaaaacacggtaaactcggtcgagtttacacgaatttactgagtattaactcggtcaaac 34218540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 40013346 - 40013429
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||| || || |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  40013346 acacgagtttaccgagtgttaactcagtcaatcttgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 40013429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 244
Target Start/End: Original strand, 16548850 - 16548912
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| |||||| ||||||||| || |||||||||||||||| ||||||||||||||||    
T  16548850 gttaactcgagtcaaattcgtcaaacatttcgattttaccagaaattgagtttacctccgagt 16548912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 29758834 - 29758735
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtga 246  Q
    ||||||||| |||| || |||| ||||||| ||||  ||||||| |||||||||||||||| |||||| ||||||||||||| | | ||||||||||| |    
T  29758834 gtaaactcggtcgagtttacacaagtttaccgagt--taactcgagtcaaactcgtcaaacattccga-tttaccagaaatcaaatctacctccgagtta 29758738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 187 - 242
Target Start/End: Complemental strand, 34909683 - 34909628
Alignment:
Q  187 actcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    |||||||||||||| |||||||||||||||| |||| | | |||||||||||||||    
T  34909683 actcggtcaaactcctcaaactttccgatttcaccaaagaccgagtttacctccga 34909628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 182 - 235
Target Start/End: Original strand, 16497741 - 16497794
Alignment:
Q  182 tgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    |||||| ||||||||||||||||||| ||||||||| | || ||||||||||||    
T  16497741 tgttaagtcggtcaaactcgtcaaacattccgatttcagcaaaaatcgagttta 16497794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 234
Target Start/End: Complemental strand, 19223107 - 19223054
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagttt 234  Q
    ||||||||||||| | ||||||||||||||||||||| |||| ||| |||||||    
T  19223107 gtgttaactcggttacactcgtcaaactttccgatttcaccaaaaaccgagttt 19223054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 25868876 - 25868828
Alignment:
Q  201 gtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||| |||| ||| ||||||||||||||||| ||||    
T  25868876 gtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 25868828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 133; Significance: 3e-69; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 133; E-Value: 3e-69
Query Start/End: Original strand, 13 - 249
Target Start/End: Complemental strand, 29469445 - 29469192
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgttt-catttgggcttgnnnnnnn------------ 99  Q
    |||||||||||||||||||||||||| ||||||||||||| |||||| |||||||||||||||||||| ||||||||||||                       
T  29469445 aaaatgatatgaaatgtttcacttcaataagctgaaacgtattgtaa-gctagaaagtaaatatgttttcatttgggcttgaaaaaaaatgggccaaaaa 29469347  T
Q  100 ---tgggccatttttgaagaaaaataa--tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtc 194  Q
       ||||||||||||||||||||| ||  |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  29469346 caatgggccatttttgaagaaaaaaaaaatacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtc 29469247  T
Q  195 aaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  29469246 aaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagttaaca 29469192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 104 - 244
Target Start/End: Original strand, 42937339 - 42937480
Alignment:
Q  104 ccatttttgaagaaaaataa-tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgt 202  Q
    ||||||||||||||||| || |||||||||||||||| |||||||||||||||||   ||||||||||||||||| ||||||||||||||||||||||||    
T  42937339 ccatttttgaagaaaaaaaaatacaggagtaaactcggaaaaacggtaaactcgcctaatttcacacgagtttacggagtgttaactcggtcaaactcgt 42937438  T
Q  203 caaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||| |||||||||||||||||||||||||||||||||    
T  42937439 caaacttttcgattttaccagaaatcgagtttacctccgagt 42937480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 8084339 - 8084238
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaa 247  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||    
T  8084339 gtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttactagaaatcgagtttacctccgagttaa 8084240  T
Q  248 ca 249  Q
    ||    
T  8084239 ca 8084238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 131 - 239
Target Start/End: Complemental strand, 50517341 - 50517232
Alignment:
Q  131 gtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcg 229  Q
    ||||||||||||||  ||||||| ||| |||| || |||||||||||| ||||||||||||||||||||||||||||| |||| ||||||||||||||||    
T  50517341 gtaaactcgtaaaactcggtaaaatcggtcgagtttacacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttccaattttaccagaaatcg 50517242  T
Q  230 agtttacctc 239  Q
    ||||||||||    
T  50517241 agtttacctc 50517232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 13 - 92
Target Start/End: Complemental strand, 8084473 - 8084394
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgtaaagctagaaagtaaatatgtt-tcatttgggcttg 92  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||    
T  8084473 aaaatgatatgaaatgtttcacttcagtaagctgaaacgtgttgt-aagctagaaagtaaatatgttgtcatttgggcttg 8084394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 161 - 249
Target Start/End: Original strand, 23671360 - 23671448
Alignment:
Q  161 atttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||| ||||||||||||||||| |||||| | |||||||||||||||||| |||||| |||||||||||||||||||||||||| ||||    
T  23671360 attttacacgagtttactgagtcttaacttgctcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctccgagttaaca 23671448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 131 - 239
Target Start/End: Original strand, 26491078 - 26491187
Alignment:
Q  131 gtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcg 229  Q
    ||||||||||||||  ||||||||||  |||| || ||||||||||||  | |||||||||||||||||||||||||| ||| |||||||||||||| ||    
T  26491078 gtaaactcgtaaaactcggtaaactcaatcgaatttacacgagtttaccaaatgttaactcggtcaaactcgtcaaaccttctgattttaccagaaaccg 26491177  T
Q  230 agtttacctc 239  Q
    ||||||||||    
T  26491178 agtttacctc 26491187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 41725671 - 41725591
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||| ||||||||||| |||| ||||||||||||||||||||||||||||||| |||| ||||    
T  41725671 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaatcgagtttacctcagagttaaca 41725591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 29856077 - 29855994
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| |||||||||||||||||||||||||| |||| ||||    
T  29856077 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaatcgagtttacctcagagttaaca 29855994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 49501173 - 49501256
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  49501173 acacgagtttaccgagtgttaactccgtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 49501256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 49507238 - 49507321
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  49507238 acacgagtttaccgagtgttaactccgtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 49507321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 6487324 - 6487392
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  6487324 gtgttcactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaaca 6487392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 146 - 238
Target Start/End: Complemental strand, 46286841 - 46286749
Alignment:
Q  146 cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    ||||||||| | |||| || ||| |||||||  ||||||||||||||||||||||||||||| |||||| ||||| |||||||||||||||||    
T  46286841 cggtaaacttgatcgagtttacaagagtttatcgagtgttaactcggtcaaactcgtcaaaccttccgagtttactagaaatcgagtttacct 46286749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 9972870 - 9972807
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  9972870 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagt 9972807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 170 - 249
Target Start/End: Original strand, 29510061 - 29510140
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||| |||||||| || |||| ||||    
T  29510061 gagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaattgagtttacatcagagttaaca 29510140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 233
Target Start/End: Complemental strand, 37916350 - 37916283
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtt 233  Q
    ||||||||||||||||||||||||| ||||||||||| |||| |||||||||||||||||| ||||||    
T  37916350 acacgagtttactgagtgttaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtt 37916283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 49834474 - 49834557
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||| ||||||| ||||||||||| |||| |||||||||||||||||| |||||||||||| |||| ||||    
T  49834474 acacgagtttaccgagtattaactcagtcaaactcgttaaaccttccgattttaccagaaaccgagtttacctcagagttaaca 49834557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 871905 - 871843
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  871905 gttaactcgagtcaaactcgtcaaacattccgattttaccagaaatcgagtttacctccgagt 871843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 51967374 - 51967306
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||| ||||    
T  51967374 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaaca 51967306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 5441963 - 5441880
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  5441963 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 5441880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 146 - 249
Target Start/End: Original strand, 24966490 - 24966593
Alignment:
Q  146 cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtg 245  Q
    ||||||||||| |||| || ||||||||||||  |||||||||| ||||||||||| ||||| |||| ||||||||| ||| ||| ||||| |||||||     
T  24966490 cggtaaactcggtcgagtttacacgagtttaccaagtgttaacttggtcaaactcggcaaaccttcccattttaccaaaaaccgaatttacttccgagtt 24966589  T
Q  246 aaca 249  Q
    ||||    
T  24966590 aaca 24966593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 26448728 - 26448665
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||  |||||||||||||||    
T  26448728 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaattaagtttacctccgagt 26448665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 28484457 - 28484374
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  |||||||||||| ||||||||||| |||| |||| ||||||||||||| |||||||||||| |||| ||||    
T  28484457 acacgagtttatcgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaaca 28484374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 37828070 - 37828153
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  37828070 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 37828153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 48261639 - 48261556
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  48261639 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 48261556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 54561316 - 54561253
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||||| |||||||||||||||||| |||| ||| |||||||||||||||||    
T  54561316 gtgttaactcggtcaaacacgtcaaactttccgatttcaccaaaaaccgagtttacctccgagt 54561253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 8563364 - 8563432
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| | || ||| |||||||| |||||||| ||||    
T  8563364 gtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaaccgagtttatctccgagttaaca 8563432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 27768625 - 27768542
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| || ||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  27768625 acacgagtttaccgaatgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 27768542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Complemental strand, 32322628 - 32322554
Alignment:
Q  166 acacgagtttactgagtgttaa-ctcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||||| ||||||||| ||| ||||||||||| || | |||||||||||||||||| ||||||||||||    
T  32322628 acacgagtttaccgagtgttaaactcagtcaaactcgttaagccttccgattttaccagaaaccgagtttacctc 32322554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 40162886 - 40162825
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    ||||||||||||||||||||||||||||||||||||| |||  ||| |||||||| ||||||    
T  40162886 gtgttaactcggtcaaactcgtcaaactttccgatttcaccgaaaaccgagtttatctccga 40162825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 33138877 - 33138829
Alignment:
Q  201 gtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  33138877 gtcaaaccttccgattttaccagaaatcgagtttacctccgagttaaca 33138829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 5800525 - 5800442
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  |||||||||||| ||||||||||| |||| ||| ||| |||||||||| ||| |||||||| |||| ||||    
T  5800525 acacgagtttatcgagtgttaactcagtcaaactcgttaaaccttctgatgttaccagaaaccgaatttacctcagagttaaca 5800442  T

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Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 50018753 - 50018670
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||| ||| | |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  50018753 acacgagtttaccgagtgttaactctgtcaatctctttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 50018670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 51321417 - 51321334
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| |||||||| || |||| |||| ||||||||||||| ||| ||||| || |||| ||||    
T  51321417 acacgagtttaccgagtgttaactcagtcaaactggttaaaccttccaattttaccagaaaccgattttacgtcagagttaaca 51321334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 182 - 249
Target Start/End: Original strand, 56423982 - 56424049
Alignment:
Q  182 tgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||| |||||||||| |||||||||||||||| || | ||| ||||||||||||||||| ||||    
T  56423982 tgttaacttggtcaaactcatcaaactttccgatttcactaaaaaccgagtttacctccgagttaaca 56424049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 182 - 242
Target Start/End: Original strand, 23170738 - 23170798
Alignment:
Q  182 tgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    ||||||||||||||||||||||||||||| |||||| |||| ||| |||  ||||||||||    
T  23170738 tgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgaaattacctccga 23170798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 226
Target Start/End: Complemental strand, 23987757 - 23987697
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    ||||||||||||  ||||||||||| ||||||||||| |||| |||| |||||||||||||    
T  23987757 acacgagtttacctagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaa 23987697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 30966983 - 30967043
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    |||||||||||| |||||||||||  ||||||||||| |||| |||| |||||||||||||    
T  30966983 acacgagtttaccgagtgttaacttagtcaaactcgttaaaccttccaattttaccagaaa 30967043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 182 - 236
Target Start/End: Original strand, 29966401 - 29966455
Alignment:
Q  182 tgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 236  Q
    |||||||||||||||||||||| |||||| |||||| |||| ||| |||||||||    
T  29966401 tgttaactcggtcaaactcgtcgaacttttcgatttcaccaaaaaccgagtttac 29966455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 174 - 244
Target Start/End: Complemental strand, 54341695 - 54341625
Alignment:
Q  174 ttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||| |||||||||||| ||||||||||| |||| || | ||||||||||||| ||| |||||||| ||||    
T  54341695 ttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagt 54341625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 240
Target Start/End: Complemental strand, 55165621 - 55165563
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctcc 240  Q
    ||||||||| |||||||||||||||| ||| |||||||||| ||||| |||||||||||    
T  55165621 gttaactcgagtcaaactcgtcaaacattctgattttaccataaatcaagtttacctcc 55165563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 183 - 235
Target Start/End: Complemental strand, 24453976 - 24453923
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagttta 235  Q
    ||||||||| |||||||||||||||| |||| |||||||| |||||||||||||    
T  24453976 gttaactcgagtcaaactcgtcaaacattccaattttaccggaaatcgagttta 24453923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 181 - 222
Target Start/End: Complemental strand, 26955433 - 26955392
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttacca 222  Q
    ||||||||||||||||||||| |||||||| |||||||||||    
T  26955433 gtgttaactcggtcaaactcgacaaacttttcgattttacca 26955392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 32683668 - 32683741
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||||| ||||||||||||  |||||||||| |||| |||| |||||| |||||| |||  |||||||    
T  32683668 acacgagtttaccgagtgttaactcattcaaactcgttaaaccttccaattttaacagaaaccgatcttacctc 32683741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 168 - 249
Target Start/End: Original strand, 54853118 - 54853199
Alignment:
Q  168 acgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||| ||||||||||||  |||||||||| |||| |||  ||||||| ||||| ||| |||||||| |||| ||||    
T  54853118 acgagtttaccgagtgttaactcaatcaaactcgttaaaccttctaattttacgagaaaccgattttacctcagagttaaca 54853199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 14334491 - 14334428
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||||||||||||| |   |||||||||||||||||| ||| | ||||||| |||||||    
T  14334491 gtgttaactcggtcaaactaggtcaactttccgattttaccaaaaaacaagtttacgtccgagt 14334428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 21486612 - 21486549
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||| || ||||||||||||||||||||| |||||  ||| ||| ||||||||||| |||||    
T  21486612 gtgttacctaggtcaaactcgtcaaactttctgatttctccaaaaaccgagtttaccttcgagt 21486549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 220
Target Start/End: Original strand, 29649645 - 29649699
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttac 220  Q
    |||||||||||| |||||||||||| || |||||||| |||| |||| |||||||    
T  29649645 acacgagtttaccgagtgttaactcagttaaactcgttaaaccttccaattttac 29649699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Complemental strand, 32889979 - 32889938
Alignment:
Q  195 aaactcgtcaaactttccgattttaccagaaatcgagtttac 236  Q
    ||||||||||||| ||| ||||||||||||||| ||||||||    
T  32889979 aaactcgtcaaaccttctgattttaccagaaattgagtttac 32889938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 249
Target Start/End: Original strand, 41470352 - 41470400
Alignment:
Q  201 gtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||| |||| ||| ||||||||||||||||| ||||    
T  41470352 gtcaaactttccaatttcaccaaaaaccgagtttacctccgagttaaca 41470400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 123; Significance: 3e-63; HSPs: 42)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 38 - 249
Target Start/End: Original strand, 18899774 - 18900000
Alignment:
Q  38 agtaagctgaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgnnnnnnntgggcca--------------tttttgaagaaaaataa 123  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||       |||||||              |||||||||||||| ||    
T  18899774 agtaagcttaaacgtgttgtaaagctagaaagtaaatatgtttcatttgggcttgaaaaaaatgggccaaaaacaatgggccatttttgaagaaaaaaaa 18899873  T
Q  124 -tacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacca 222  Q
     ||| |||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |    
T  18899874 atactggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttacta 18899973  T
Q  223 gaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||| ||||    
T  18899974 gaaatcgagtttacctccgagttaaca 18900000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 40829766 - 40829665
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaa 247  Q
    ||||||||| |||| || ||| ||||||| |||||||||||||||||||| ||||||||| || | ||||||||||||| ||||||||||||||||| ||    
T  40829766 gtaaactcggtcgagtttacatgagtttattgagtgttaactcggtcaaattcgtcaaacctttctattttaccagaaaccgagtttacctccgagttaa 40829667  T
Q  248 ca 249  Q
    ||    
T  40829666 ca 40829665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 13898573 - 13898505
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  13898573 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaaca 13898505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 14039190 - 14039122
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  14039190 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaaca 14039122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 18727620 - 18727719
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || |||||||||||  || |||||||||||| ||||||||||||||||  ||||||||||||| |||||||||||||||||| ||||    
T  18727620 aaactcggtcgagtttacacgagtttatcgaatgttaactcggtgaaactcgtcaaactttttgattttaccagaattcgagtttacctccgagttaaca 18727719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 175 - 249
Target Start/End: Complemental strand, 15224333 - 15224259
Alignment:
Q  175 tactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||| |||||||||||||||||||||| |||||| ||||||||||||||||||||| |||| ||||    
T  15224333 tactgagtgttaattcggtcaaactcgtcaaacttttcgatttcaccagaaatcgagtttacctctgagttaaca 15224259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 18177832 - 18177749
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| ||||||||| ||||||||||||| ||| |||||||| |||| ||||    
T  18177832 acacgagtttaccgagtgttaactctgtcaaactcgttaaactttccaattttaccagaaaccgattttacctcagagttaaca 18177749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 38413458 - 38413521
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  38413458 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagt 38413521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 166 - 244
Target Start/End: Original strand, 31847207 - 31847285
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||| ||||||||| |||||| |||||||||||| ||| ||||||| ||||||| ||||||||||||||||    
T  31847207 acacgagtttaccgagtgttaattcggtcgaactcgtcaaaccttctgattttatcagaaatagagtttacctccgagt 31847285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 169 - 239
Target Start/End: Original strand, 35404311 - 35404381
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    ||||||||  |||||||||||||||||||||||||||||||||| ||||||||| ||| ||||||||||||    
T  35404311 cgagtttatcgagtgttaactcggtcaaactcgtcaaactttccaattttaccaaaaaccgagtttacctc 35404381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 3991870 - 3991802
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||| ||||    
T  3991870 gtgttaactcggtcaaactcgtcaaacttttcgatttcaccaaaaaccgagtttacctccgagttaaca 3991802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 19948635 - 19948567
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| |||| |||  |||||||||||||||| ||||    
T  19948635 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaactgagtttacctccgagttaaca 19948567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 38295707 - 38295767
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||    
T  38295707 acacgagtttaccgagtgttaactcggtcaaactcgtcaaaccttctgattttaccagaaa 38295767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 150 - 249
Target Start/End: Original strand, 2308687 - 2308786
Alignment:
Q  150 aaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| |||| || |||||| ||||| ||||||||||| ||||||||| ||||||||||  |||||||||| ||| ||| ||||||||||||| ||||    
T  2308687 aaactcgatcgagtttacacgattttaccgagtgttaacttggtcaaacttgtcaaactttttgattttaccacaaaccgaatttacctccgagttaaca 2308786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 28739935 - 28740018
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  28739935 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 28740018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 43825401 - 43825318
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  43825401 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 43825318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 181 - 244
Target Start/End: Original strand, 45161137 - 45161200
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||| |||||||||||||||||||||| |||| ||| |||||||||||||||||    
T  45161137 gtgttaactcggtcgaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagt 45161200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 181 - 242
Target Start/End: Complemental strand, 41978934 - 41978873
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    ||||||||||||||||||||||||||||||||||||| | || ||| |||||||||||||||    
T  41978934 gtgttaactcggtcaaactcgtcaaactttccgatttcatcaaaaaccgagtttacctccga 41978873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 3575399 - 3575319
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  3575399 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 3575319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 11153354 - 11153422
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||| ||||| |  ||||||||||||||| ||||||||||||||||| ||||    
T  11153354 gtgttaactcggtcaaactcgccaaacatctcgattttaccagaaaccgagtttacctccgagttaaca 11153422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 7027464 - 7027381
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| || | ||||||||||||| ||| |||||||| |||| ||||    
T  7027464 acacgagtttaccgagtgttaactcagtcaaactcgttaaacctttcaattttaccagaaaccgattttacctcagagttaaca 7027381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 28845146 - 28845063
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| |||||| |||||| ||| |||||||| |||| ||||    
T  28845146 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaaccgattttacctcagagttaaca 28845063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 33136177 - 33136094
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||| ||||||| |||||||||||  |||||| |||| |||| |||||||| |||||||||||||||||||||| |||| ||||    
T  33136177 acacaagtttaccgagtgttaacttagtcaaattcgttaaaccttccgattataccagaaatcgagtttacctcagagttaaca 33136094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 181 - 244
Target Start/End: Complemental strand, 33262950 - 33262887
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||| |||||||||||||||||||||||||| |||| ||| ||||||||||| |||||    
T  33262950 gtgttaactcagtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttaccttcgagt 33262887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 182 - 233
Target Start/End: Original strand, 43318766 - 43318817
Alignment:
Q  182 tgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtt 233  Q
    ||||||||||||||||||||||||||||||||||||||||| |||| |||||    
T  43318766 tgttaactcggtcaaactcgtcaaactttccgattttaccaaaaatagagtt 43318817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 183 - 244
Target Start/End: Complemental strand, 15926474 - 15926412
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||||| |||||||||||||||| || |||||||||||||||||||||| ||||||||||    
T  15926474 gttaactcgagtcaaactcgtcaaacattgcgattttaccagaaatcgagttaacctccgagt 15926412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 13 - 65
Target Start/End: Original strand, 18899722 - 18899775
Alignment:
Q  13 aaaatgatatgaaatgtttcacttcagtaagctgaaa-cgtgttgtaaagctag 65  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||    
T  18899722 aaaatgatatgaaatgtttcacttcagtaagctgaaaccgtgttgtaatgctag 18899775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 170 - 238
Target Start/End: Original strand, 6224222 - 6224290
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||| |||||||||||| ||||||||||| |||| |||||||||||| ||||| |||||| ||||    
T  6224222 gagtttaccgagtgttaactcagtcaaactcgttaaaccttccgattttactagaaaccgagttcacct 6224290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 10657991 - 10657908
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  |||||||||||| || |||||||| |||| |||| ||||||||| ||||||| |||||||| |||| ||||    
T  10657991 acacgagtttatcgagtgttaactcagttaaactcgttaaaccttccaattttaccaaaaatcgattttacctcagagttaaca 10657908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 13833060 - 13833143
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| |||||||| || |||  ||| |||||||| |||||| ||||||||||| |||| ||||    
T  13833060 acacgagtttaccgagtgttaactcagtcaaacttgttaaatcttctgattttactagaaattgagtttacctcagagttaaca 13833143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 25288724 - 25288641
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  ||||||||||||  |||||| ||| |||| |||||||||||| ||||| |||||||||||| |||| ||||    
T  25288724 acacgagtttatcgagtgttaactcaatcaaacccgttaaaccttccgattttactagaaaccgagtttacctcagagttaaca 25288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 26789346 - 26789263
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||   ||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  26789346 acacgagtttatcaagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 26789263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 43079051 - 43078968
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||  ||||||||||||  |||||||||| |||| ||| ||||||| |||||| |||||||||||| |||| ||||    
T  43079051 acacgagtttatcgagtgttaactcaatcaaactcgttaaaccttcggattttaacagaaaccgagtttacctcagagttaaca 43078968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 169 - 238
Target Start/End: Complemental strand, 34342347 - 34342278
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    ||||||||| || |||||||||  || |||||||||||| |||||| ||||||||||| |||||||||||    
T  34342347 cgagtttaccgactgttaactcaatctaactcgtcaaaccttccgagtttaccagaaaccgagtttacct 34342278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 183 - 238
Target Start/End: Original strand, 3858427 - 3858483
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    ||||||||| || ||||||||||||| |||||||||||||| |||||||||||||||    
T  3858427 gttaactcgagttaaactcgtcaaacattccgattttaccaaaaatcgagtttacct 3858483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 249
Target Start/End: Complemental strand, 379487 - 379408
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||| |||||||||||| ||||||||||| || | ||||||||||| || ||| ||| |||||||| |||| ||||    
T  379487 gagtttaccgagtgttaactcagtcaaactcgttaagccttccgattttatcaaaaaccgaatttacctcagagttaaca 379408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 32294008 - 32293954
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttac 236  Q
    ||||||||| |||||||||||||||| |||||||||||| ||||||| |||||||    
T  32294008 gttaactcgagtcaaactcgtcaaacattccgattttacaagaaatccagtttac 32293954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 239
Target Start/End: Original strand, 43304976 - 43305034
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||| |||||| |||||||||||||| |||| || || |||||||||||||||    
T  43304976 gtgttaactcagtcaaagtcgtcaaactttcctatttcactagtaatcgagtttacctc 43305034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 148 - 249
Target Start/End: Complemental strand, 24025978 - 24025877
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaa 247  Q
    ||||||||  |||| ||||||||||||||    |||||||||| ||| || ||||||||| ||| |||||||||| ||| |||||||| |||| ||| ||    
T  24025978 gtaaactcagtcgagttcacacgagtttaacacgtgttaactcagtccaattcgtcaaacattctgattttaccaaaaaccgagtttatctccaagttaa 24025879  T
Q  248 ca 249  Q
    ||    
T  24025878 ca 24025877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 166 - 218
Target Start/End: Complemental strand, 3464163 - 3464111
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgatttt 218  Q
    ||||||||||||||||||||||||| ||||||||| | |||| |||| |||||    
T  3464163 acacgagtttactgagtgttaactcagtcaaactcattaaaccttccaatttt 3464111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 32242211 - 32242278
Alignment:
Q  183 gttaactcg-gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| ||||||||||| |||| ||| |||||||| ||||||| |||||||||| |||| ||||    
T  32242211 gttaactcgagtcaaactcgttaaacattctgattttacaagaaatcaagtttacctcagagttaaca 32242278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 201 - 249
Target Start/End: Complemental strand, 12877763 - 12877715
Alignment:
Q  201 gtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||| | || ||| ||||||||||||||||| ||||    
T  12877763 gtcaaactttccgatttcatcaaaaaccgagtttacctccgagttaaca 12877715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 118; Significance: 3e-60; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 101 - 249
Target Start/End: Original strand, 1463594 - 1463742
Alignment:
Q  101 gggccatttttgaagaaaaataatacaggagtaaactcgtaaaa-acggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaact 199  Q
    |||||||||||||||||||| |||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||||||||||||||||||||||||||    
T  1463594 gggccatttttgaagaaaaa-aatacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaact 1463692  T
Q  200 cgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  1463693 cgtcaaactttccgattttaccagaaatcgagtttacctccgagttaaca 1463742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 105 - 249
Target Start/End: Complemental strand, 6788274 - 6788129
Alignment:
Q  105 catttttgaagaaaaataatacaggagtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtc 203  Q
    |||||||||||||||| |||||||||||||||||| ||||| |||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  6788274 catttttgaagaaaaaaaatacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttactgagtgttaactcggtcaaactcgtc 6788175  T
Q  204 aaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||    
T  6788174 aaactttccgattttaccagaaatcgagtttacctccgagttaaca 6788129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 116 - 249
Target Start/End: Original strand, 10113718 - 10113851
Alignment:
Q  116 aaaaataatacaggagtaaactcgtaaaaacggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgat 215  Q
    ||||| |||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| | ||||||||||||||||||||||||||||||    
T  10113718 aaaaaaaatacaggagtaaactcgcaaaaacggtaaactcgcccgatttcacacgagtttactgagtctaaactcggtcaaactcgtcaaactttccgat 10113817  T
Q  216 tttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| ||| ||||||||||||||||| ||||    
T  10113818 tttaccaaaaaacgagtttacctccgagttaaca 10113851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 131 - 249
Target Start/End: Complemental strand, 16438854 - 16438735
Alignment:
Q  131 gtaaactcgtaaaaa-cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcg 229  Q
    ||||||||||||||  || |||||||| |||| || |||||||||||| ||||| ||||||| | ||||||||||||| ||||||||||||||||| |||    
T  16438854 gtaaactcgtaaaactcgctaaactcgatcgagtttacacgagtttaccgagtgctaactcgattaaactcgtcaaaccttccgattttaccagaagtcg 16438755  T
Q  230 agtttacctccgagtgaaca 249  Q
    ||||||||||| ||| ||||    
T  16438754 agtttacctccaagttaaca 16438735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 159 - 249
Target Start/End: Complemental strand, 3000359 - 3000269
Alignment:
Q  159 cgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||| ||||||||||| |||||||||||||| ||||||||||||||||| |||||||||||| ||||||| |||||| |||||| ||||    
T  3000359 cgattttacacgagtttattgagtgttaactcgatcaaactcgtcaaacttcccgattttaccataaatcgaatttacccccgagttaaca 3000269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 31975643 - 31975723
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||| |||||||||||||||||||||||| |||||||||||| |||||||||||||||||| |||| ||||    
T  31975643 cgagtttaccgagtcttaactcggtcaaactcgtcaaaccttccgattttacaagaaatcgagtttacctcagagttaaca 31975723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Original strand, 31996251 - 31996319
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  31996251 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaaca 31996319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 170 - 244
Target Start/End: Complemental strand, 2607003 - 2606929
Alignment:
Q  170 gagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    ||||||| ||||||||||||||||||||||| |||||| ||| ||||||||||||||||||||||||||| ||||    
T  2607003 gagtttattgagtgttaactcggtcaaactcatcaaaccttctgattttaccagaaatcgagtttacctcagagt 2606929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 182 - 238
Target Start/End: Complemental strand, 21199650 - 21199594
Alignment:
Q  182 tgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  21199650 tgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacct 21199594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 31896197 - 31896114
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  31896197 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 31896114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 183 - 249
Target Start/End: Original strand, 8779586 - 8779652
Alignment:
Q  183 gttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||| ||||||||||||||||||||||||||| |||| ||| ||||||||||||||||| ||||    
T  8779586 gttaacttggtcaaactcgtcaaactttccgatttcaccaaaaaccgagtttacctccgagttaaca 8779652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 146 - 222
Target Start/End: Complemental strand, 24194546 - 24194469
Alignment:
Q  146 cggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaa-actcgtcaaactttccgattttacca 222  Q
    ||||||||||| | || || |||||||||||| |||||||||||||||||| |||||||||||||||| |||||||||    
T  24194546 cggtaaactcgattgaatttacacgagtttaccgagtgttaactcggtcaatactcgtcaaactttccaattttacca 24194469  T

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Target: chr6; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 4200095 - 4200175
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  4200095 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 4200175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 31067989 - 31067909
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||| |||| ||||    
T  31067989 cgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacctcagagttaaca 31067909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 166 - 238
Target Start/End: Complemental strand, 34773945 - 34773873
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||||||| ||| |||||||    
T  34773945 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaaccgattttacct 34773873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 186 - 249
Target Start/End: Original strand, 31535068 - 31535131
Alignment:
Q  186 aactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||||||||||||| || ||||||||||||||||||||||| |||| |||| ||||    
T  31535068 aactcggtcaaactcgtcaaacctttcgattttaccagaaatcgagtttgcctcagagttaaca 31535131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 179 - 249
Target Start/End: Original strand, 14262090 - 14262160
Alignment:
Q  179 gagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| ||||||||||| |||| |||| ||||||||||||||||| |||||||| |||| ||||    
T  14262090 gagtgttaactcagtcaaactcgttaaaccttccaattttaccagaaatcgattttacctcagagttaaca 14262160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 7497645 - 7497575
Alignment:
Q  179 gagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||  |||||||||| |||| |||| ||||||||||||| |||||||||||| |||| ||||    
T  7497645 gagtgttaactcaatcaaactcgttaaaccttccaattttaccagaaaccgagtttacctcagagttaaca 7497575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 244
Target Start/End: Complemental strand, 13461459 - 13461407
Alignment:
Q  192 gtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagt 244  Q
    |||||||||||||||| ||| |||||||||| ||| |||||||||||||||||    
T  13461459 gtcaaactcgtcaaacattctgattttaccaaaaaccgagtttacctccgagt 13461407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 166 - 226
Target Start/End: Original strand, 30384705 - 30384765
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaa 226  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| |||||| ||||||    
T  30384705 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttatcagaaa 30384765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 148 - 239
Target Start/End: Complemental strand, 12029105 - 12029014
Alignment:
Q  148 gtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    ||||||||| |||| || ||||||||||| |  |||||||||  |||||||||||||||| || |||||| |  | ||||||||||||||||    
T  12029105 gtaaactcggtcgagtttacacgagtttaatacgtgttaactatgtcaaactcgtcaaacatttcgatttcaataaaaatcgagtttacctc 12029014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 249
Target Start/End: Original strand, 28900863 - 28900909
Alignment:
Q  203 caaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  28900863 caaaccttccgattttaccagaaatcgagtttacctcagagttaaca 28900909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 172 - 249
Target Start/End: Original strand, 34758726 - 34758803
Alignment:
Q  172 gtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||| |||||||||||| |||||||| || |||| |||| |||||| |||||| ||| |||||||| |||| ||||    
T  34758726 gtttaccgagtgttaactcagtcaaacttgttaaaccttccaattttatcagaaaccgattttacctcagagttaaca 34758803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 201 - 242
Target Start/End: Original strand, 7835387 - 7835428
Alignment:
Q  201 gtcaaactttccgattttaccagaaatcgagtttacctccga 242  Q
    ||||||||||||||||| |||| ||| |||||||||||||||    
T  7835387 gtcaaactttccgatttcaccaaaaaccgagtttacctccga 7835428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 68; Significance: 2e-30; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 893 - 976
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| ||||    
T  893 acacgagtttactaagtgttaactcggtcaaactcatcaaactttccgattttaccagaaaccgagtttacctccgagttaaca 976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0263 (Bit Score: 67; Significance: 7e-30; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 101 - 198
Target Start/End: Original strand, 391 - 489
Alignment:
Q  101 gggccatttttgaagaaaaataatacaggagtaaactcgtaaaa-acggtaaactcgctcgatttcacacgagtttactgagtgttaactcggtcaaac 198  Q
    ||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||| |||||| ||||||||||| |||||||||||||||||||||    
T  391 gggccatttttgaaggaaaaaaatacaggagtaaactcgcaaaaaacggtaaactcgcccgattttacacgagtttagtgagtgttaactcggtcaaac 489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0421 (Bit Score: 57; Significance: 7e-24; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 1796 - 1728
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||    
T  1796 gtgttaactcggtcaaactcgtcaaactttccgatttcaccaaaaatcgagtttacctccgagttaaca 1728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 11085 - 11002
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| |||||||||||| ||||||||||| |||| |||| ||||||||| ||||||| |||||||| |||| ||||    
T  11085 acacgagtttaccgagtgttaactcagtcaaactcgttaaaccttccaattttaccaaaaatcgaatttacctcagagttaaca 11002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 179 - 238
Target Start/End: Complemental strand, 89379 - 89320
Alignment:
Q  179 gagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacct 238  Q
    ||||||||||||| ||||||||||||||| |||| |||||||||||||||||||||||||    
T  89379 gagtgttaactcgatcaaactcgtcaaaccttccaattttaccagaaatcgagtttacct 89320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0383 (Bit Score: 45; Significance: 9e-17; HSPs: 1)
Name: scaffold0383
Description:

Target: scaffold0383; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 16673 - 16753
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||  ||||||||||| ||||||||||| |||| || ||||||||||||||| |||||||||||| |||| ||||    
T  16673 cgagtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaaca 16753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152 (Bit Score: 45; Significance: 9e-17; HSPs: 2)
Name: scaffold0152
Description:

Target: scaffold0152; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Original strand, 20909 - 20989
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||  ||||||||||| ||||||||||| |||| || ||||||||||||||| |||||||||||| |||| ||||    
T  20909 cgagtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaaca 20989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0152; HSP #2
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 169 - 249
Target Start/End: Complemental strand, 28892 - 28812
Alignment:
Q  169 cgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||  ||||||||||| ||||||||||| |||| || ||||||||||||||| |||||||||||| |||| ||||    
T  28892 cgagtttaccaagtgttaactcagtcaaactcgttaaacctttcgattttaccagaaaccgagtttacctcagagttaaca 28812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0246 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0246
Description:

Target: scaffold0246; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 181 - 249
Target Start/End: Complemental strand, 1464 - 1396
Alignment:
Q  181 gtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||| ||||||||||||||||||||||| || | ||| ||||||||||||| ||| ||||    
T  1464 gtgttaactcggttaaactcgtcaaactttccgatttcactaaaaaccgagtttacctccaagttaaca 1396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Original strand, 57705 - 57788
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| ||||||||||||  |||||||| | |||| ||| |||||||| ||||| |||||||||||| |||| ||||    
T  57705 acacgagtttaccgagtgttaactcaatcaaactcattaaaccttctgattttactagaaaccgagtttacctcagagttaaca 57788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 166 - 239
Target Start/End: Original strand, 39276 - 39349
Alignment:
Q  166 acacgagtttactgagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctc 239  Q
    |||||||||||   |||| |||||| |||||||||||||||| || ||||||||||||||| |||||| |||||    
T  39276 acacgagtttatcaagtgctaactcagtcaaactcgtcaaacctttcgattttaccagaaaccgagttgacctc 39349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1504 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 179 - 249
Target Start/End: Complemental strand, 1414 - 1344
Alignment:
Q  179 gagtgttaactcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    |||||||||||| ||||||||||| |||| |||| ||||||| ||||| ||| |||||||| |||| ||||    
T  1414 gagtgttaactcagtcaaactcgttaaaccttccaattttacaagaaaccgattttacctcagagttaaca 1344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 203 - 249
Target Start/End: Complemental strand, 8931 - 8885
Alignment:
Q  203 caaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||| ||||||||||||||||||||||||||||||| |||| ||||    
T  8931 caaaccttccgattttaccagaaatcgagtttacctcagagttaaca 8885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0347 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0347
Description:

Target: scaffold0347; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 166 - 249
Target Start/End: Complemental strand, 15226 - 15139
Alignment:
Q  166 acacgagtttactgagtgttaa----ctcggtcaaactcgtcaaactttccgattttaccagaaatcgagtttacctccgagtgaaca 249  Q
    ||||||||||||||||||||||    ||| ||||||||||| |||| |||| ||||||||| ||| ||| |||||||| |||| ||||    
T  15226 acacgagtttactgagtgttaattaactcagtcaaactcgttaaaccttccaattttaccataaaccgattttacctcagagttaaca 15139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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