View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20821_high_7 (Length: 570)

Name: NF20821_high_7
Description: NF20821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20821_high_7
NF20821_high_7
[»] chr8 (33 HSPs)
chr8 (18-483)||(15849793-15850257)
chr8 (480-561)||(15848076-15848154)
chr8 (483-544)||(21303984-21304044)
chr8 (484-544)||(31846469-31846528)
chr8 (482-545)||(8437917-8437979)
chr8 (481-544)||(34923861-34923922)
chr8 (484-539)||(40791756-40791810)
chr8 (512-553)||(17564717-17564757)
chr8 (484-553)||(40791068-40791135)
chr8 (513-553)||(34925393-34925432)
chr8 (510-553)||(12336280-12336322)
chr8 (484-551)||(14094140-14094205)
chr8 (511-553)||(8443313-8443354)
chr8 (510-544)||(13421488-13421522)
chr8 (482-544)||(30353864-30353925)
chr8 (484-553)||(36016748-36016814)
chr8 (512-553)||(253572-253612)
chr8 (512-553)||(662246-662286)
chr8 (512-553)||(848044-848084)
chr8 (484-537)||(3075328-3075380)
chr8 (512-553)||(31740137-31740177)
chr8 (512-553)||(37266130-37266170)
chr8 (512-553)||(37872855-37872895)
chr8 (482-539)||(41312381-41312437)
chr8 (484-545)||(43764100-43764160)
chr8 (510-539)||(44746840-44746869)
chr8 (484-544)||(8442678-8442737)
chr8 (512-544)||(11140143-11140175)
chr8 (484-544)||(14880184-14880243)
chr8 (484-536)||(17565342-17565393)
chr8 (484-544)||(22934311-22934370)
chr8 (484-544)||(25485422-25485481)
chr8 (512-544)||(31739558-31739590)
[»] chr3 (33 HSPs)
chr3 (479-549)||(1364042-1364111)
chr3 (484-550)||(23682013-23682077)
chr3 (484-550)||(24054250-24054314)
chr3 (481-551)||(47794640-47794709)
chr3 (492-551)||(41587300-41587357)
chr3 (484-542)||(2756604-2756661)
chr3 (484-550)||(18364652-18364716)
chr3 (512-553)||(17764949-17764989)
chr3 (512-553)||(19066269-19066309)
chr3 (484-553)||(54403581-54403648)
chr3 (484-544)||(18365276-18365335)
chr3 (513-553)||(53490718-53490757)
chr3 (512-551)||(291158-291196)
chr3 (512-551)||(3090407-3090445)
chr3 (481-544)||(4558051-4558113)
chr3 (484-539)||(11345359-11345413)
chr3 (481-544)||(11581855-11581917)
chr3 (487-549)||(54605787-54605847)
chr3 (510-544)||(54606419-54606453)
chr3 (484-553)||(1262419-1262486)
chr3 (481-534)||(25480546-25480598)
chr3 (492-561)||(32222069-32222136)
chr3 (512-553)||(40036383-40036423)
chr3 (484-553)||(44500030-44500097)
chr3 (484-549)||(49765120-49765183)
chr3 (512-544)||(3089799-3089831)
chr3 (512-544)||(5963106-5963138)
chr3 (484-544)||(10887732-10887791)
chr3 (484-544)||(37183100-37183159)
chr3 (512-544)||(40927542-40927574)
chr3 (25-73)||(43921666-43921714)
chr3 (512-544)||(49080604-49080636)
chr3 (484-544)||(53490071-53490129)
[»] chr2 (30 HSPs)
chr2 (484-542)||(4437976-4438033)
chr2 (484-553)||(37009647-37009714)
chr2 (484-553)||(37199587-37199654)
chr2 (512-553)||(6229872-6229912)
chr2 (484-553)||(34173701-34173768)
chr2 (484-544)||(17829070-17829129)
chr2 (512-551)||(33146081-33146119)
chr2 (511-550)||(37329745-37329783)
chr2 (512-542)||(3044974-3045004)
chr2 (482-544)||(10357116-10357177)
chr2 (480-534)||(38910690-38910743)
chr2 (512-553)||(3515460-3515500)
chr2 (512-553)||(11564456-11564496)
chr2 (481-534)||(11942943-11942995)
chr2 (482-535)||(13873990-13874042)
chr2 (482-535)||(14014115-14014167)
chr2 (484-553)||(28167559-28167626)
chr2 (512-553)||(31597271-31597311)
chr2 (512-553)||(31709113-31709153)
chr2 (512-553)||(40769357-40769397)
chr2 (512-544)||(4437358-4437390)
chr2 (512-544)||(5474670-5474702)
chr2 (512-544)||(15006476-15006508)
chr2 (484-544)||(20894276-20894335)
chr2 (512-544)||(33146698-33146730)
chr2 (512-544)||(34173092-34173124)
chr2 (512-544)||(35175668-35175700)
chr2 (512-544)||(37198970-37199002)
chr2 (512-544)||(41521663-41521695)
chr2 (510-550)||(43439789-43439828)
[»] chr7 (30 HSPs)
chr7 (484-553)||(40401539-40401606)
chr7 (484-544)||(32867898-32867957)
chr7 (498-553)||(16425997-16426050)
chr7 (512-553)||(20261569-20261609)
chr7 (484-553)||(31221443-31221510)
chr7 (484-544)||(14078376-14078435)
chr7 (484-544)||(14388404-14388463)
chr7 (510-550)||(28308661-28308700)
chr7 (513-553)||(48872059-48872098)
chr7 (481-544)||(25607607-25607669)
chr7 (484-534)||(2935766-2935815)
chr7 (510-544)||(33869238-33869272)
chr7 (512-553)||(3391804-3391844)
chr7 (484-553)||(11639916-11639983)
chr7 (512-553)||(12677146-12677186)
chr7 (484-553)||(27619621-27619688)
chr7 (481-538)||(36687313-36687369)
chr7 (481-534)||(36848503-36848555)
chr7 (484-553)||(38987772-38987839)
chr7 (484-544)||(25276-25335)
chr7 (484-544)||(317298-317357)
chr7 (510-538)||(14753878-14753906)
chr7 (484-544)||(19156071-19156130)
chr7 (484-544)||(20755470-20755529)
chr7 (512-544)||(27144228-27144260)
chr7 (482-538)||(27144842-27144897)
chr7 (512-544)||(34999232-34999264)
chr7 (481-553)||(36688847-36688917)
chr7 (512-544)||(36847879-36847911)
chr7 (512-544)||(48982534-48982566)
[»] chr1 (19 HSPs)
chr1 (484-553)||(16536391-16536458)
chr1 (481-544)||(8061042-8061104)
chr1 (484-553)||(45559752-45559819)
chr1 (513-553)||(17109352-17109391)
chr1 (482-550)||(18406547-18406613)
chr1 (480-550)||(31765351-31765417)
chr1 (484-544)||(45738666-45738725)
chr1 (510-541)||(46682719-46682750)
chr1 (486-557)||(50143406-50143475)
chr1 (484-542)||(28044498-28044555)
chr1 (482-544)||(29510474-29510535)
chr1 (484-550)||(45737324-45737388)
chr1 (512-553)||(27225722-27225762)
chr1 (484-553)||(36604746-36604813)
chr1 (512-545)||(45195233-45195266)
chr1 (484-544)||(19072354-19072413)
chr1 (484-544)||(19120244-19120303)
chr1 (484-544)||(41575193-41575252)
chr1 (513-553)||(42831189-42831228)
[»] chr5 (18 HSPs)
chr5 (484-544)||(35751536-35751595)
chr5 (484-553)||(27979251-27979318)
chr5 (481-550)||(36737439-36737506)
chr5 (480-536)||(9118851-9118906)
chr5 (484-544)||(19408559-19408618)
chr5 (484-544)||(20183380-20183439)
chr5 (484-539)||(15144432-15144486)
chr5 (486-544)||(20570150-20570207)
chr5 (512-553)||(8573336-8573376)
chr5 (512-553)||(14594116-14594156)
chr5 (512-553)||(20259991-20260031)
chr5 (484-553)||(36762134-36762201)
chr5 (484-536)||(1932025-1932076)
chr5 (512-544)||(4877370-4877402)
chr5 (484-544)||(9017667-9017726)
chr5 (484-544)||(21639038-21639097)
chr5 (480-536)||(27028644-27028699)
chr5 (512-544)||(36742577-36742609)
[»] chr4 (30 HSPs)
chr4 (484-544)||(37708795-37708854)
chr4 (482-544)||(17722768-17722829)
chr4 (481-539)||(45847768-45847825)
chr4 (484-553)||(754888-754955)
chr4 (512-553)||(13482230-13482270)
chr4 (484-553)||(35665972-35666039)
chr4 (484-553)||(55068863-55068930)
chr4 (484-544)||(755522-755581)
chr4 (484-544)||(26705665-26705724)
chr4 (484-544)||(35667279-35667338)
chr4 (484-539)||(16192316-16192370)
chr4 (484-539)||(41919909-41919963)
chr4 (484-550)||(23722042-23722106)
chr4 (484-538)||(35667758-35667811)
chr4 (492-550)||(37147767-37147823)
chr4 (495-553)||(51268537-51268593)
chr4 (492-553)||(721967-722026)
chr4 (512-553)||(7479334-7479374)
chr4 (512-553)||(25010045-25010085)
chr4 (512-553)||(35667369-35667409)
chr4 (510-551)||(36898089-36898129)
chr4 (512-553)||(51019698-51019738)
chr4 (484-544)||(721342-721401)
chr4 (484-544)||(796403-796462)
chr4 (486-550)||(4949956-4950018)
chr4 (484-544)||(8192986-8193045)
chr4 (512-544)||(16960252-16960284)
chr4 (492-536)||(16960878-16960921)
chr4 (480-552)||(30193159-30193229)
chr4 (481-537)||(33047232-33047287)
[»] scaffold0003 (4 HSPs)
scaffold0003 (498-553)||(14710-14763)
scaffold0003 (498-553)||(28856-28909)
scaffold0003 (484-553)||(421167-421234)
scaffold0003 (484-544)||(421925-421984)
[»] chr6 (25 HSPs)
chr6 (492-539)||(7448891-7448937)
chr6 (482-544)||(11794763-11794824)
chr6 (512-553)||(21802592-21802632)
chr6 (484-553)||(32114395-32114462)
chr6 (484-544)||(12026193-12026252)
chr6 (484-544)||(12693865-12693924)
chr6 (513-553)||(15499484-15499523)
chr6 (484-550)||(10702925-10702989)
chr6 (511-553)||(31282233-31282274)
chr6 (482-544)||(32522499-32522560)
chr6 (482-539)||(188434-188490)
chr6 (512-553)||(2522715-2522755)
chr6 (512-553)||(14306838-14306878)
chr6 (512-553)||(22342144-22342184)
chr6 (512-544)||(4100561-4100593)
chr6 (512-544)||(4125923-4125955)
chr6 (512-544)||(10702317-10702349)
chr6 (484-544)||(11522819-11522878)
chr6 (484-544)||(12033113-12033172)
chr6 (484-544)||(14313845-14313904)
chr6 (485-553)||(22342208-22342274)
chr6 (512-544)||(32113785-32113817)
chr6 (512-544)||(32130982-32131014)
chr6 (492-532)||(32521863-32521902)
chr6 (482-534)||(34794528-34794579)
[»] scaffold0189 (1 HSPs)
scaffold0189 (512-553)||(11336-11376)
[»] scaffold0068 (1 HSPs)
scaffold0068 (512-553)||(59307-59347)
[»] scaffold0340 (1 HSPs)
scaffold0340 (484-544)||(12855-12914)
[»] scaffold0695 (1 HSPs)
scaffold0695 (484-551)||(2243-2308)
[»] scaffold0001 (1 HSPs)
scaffold0001 (512-553)||(185172-185212)
[»] scaffold0368 (1 HSPs)
scaffold0368 (513-553)||(11245-11284)
[»] scaffold0289 (1 HSPs)
scaffold0289 (512-544)||(3455-3487)
[»] scaffold0201 (1 HSPs)
scaffold0201 (484-544)||(15324-15383)
[»] scaffold0105 (1 HSPs)
scaffold0105 (484-544)||(19642-19701)


Alignment Details
Target: chr8 (Bit Score: 386; Significance: 0; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 386; E-Value: 0
Query Start/End: Original strand, 18 - 483
Target Start/End: Complemental strand, 15850257 - 15849793
Alignment:
Q  18 ataggaatgtcggacaccgtaacacggttggttcaagaggtgtccgtgcttcataggttgagtcttcactacaacttgagtctctaattgccctttaagt 117  Q
    |||||| ||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15850257 ataggagtgtcggacaccgtaatacggctggttcaagaggtgtccgtgcttcataggttgagtcttcactacaacttgagtctctaattgccctttaagt 15850158  T
Q  118 tggttctgcatttaaatttgaacaacatgttgagaagccaattcagctctaacatccgctgagaatgttgaaactcagtagcagacacaaactctgctga 217  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| || ||    
T  15850157 tggttctgcatttaaatttgaacaacatgtcgagaagccaattcagctctaacatccgctaagaatgttgaaactcagtagcagacacaaactcagcaga 15850058  T
Q  218 gttcttaggtatggggtcagagtcagagataactatgttatcaagcttcggaagcactataggagtatcagacacaaacatatagatctctggcagattc 317  Q
    ||||| |||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15850057 gttctgaggtcttgggtcagagtcagagataactatgttatcaagcttcagaagcactataggagtatcagacacaaacatatagatctctggcagattc 15849958  T
Q  318 atcaagatgaggaagcaaacgacgcttaagattccatctgagatcatccaagtccatgtgactgagcatgtttgagaatcatcatctcagagcttcctta 417  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| || |||||||||||||    
T  15849957 atcaagatgaggaagcaaatgacgcttaagattccatctgagatcatctaagtccatgtgactgagcatgtttgagaatcatcctcccagagcttcctta 15849858  T
Q  418 ttagcttacatttgttcactcccacatttagcagtaatgttatcaacttgatttctggtcattctt 483  Q
    |||||| |||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||    
T  15849857 ttagctaacatttgttcactcccacctttagcag-aatgtcatcaacttgatttctggtcattctt 15849793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 480 - 561
Target Start/End: Complemental strand, 15848154 - 15848076
Alignment:
Q  480 tcttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagtataatctac 561  Q
    |||||||||||||||||||||||||||   | ||||||||||||||||||| ||| | ||||| |||||||||| ||| |||    
T  15848154 tcttaaagatgattgaattatactcct---cccctcttatgttaaaatatatacttctcttcctttgaaaagtaaaatntac 15848076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 483 - 544
Target Start/End: Original strand, 21303984 - 21304044
Alignment:
Q  483 taaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||||||||||||| | |||||| ||||||||||||||||||||||| |||| ||||    
T  21303984 taaagatgattgaattatatttctttcc-cctcttatgttaaaatatacacttccctcccct 21304044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 31846469 - 31846528
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||| ||| |  ||| |||||||||||||||||||||||||||||||||    
T  31846469 aaagatgattgaattacacttccctcc-cctcttatgttaaaatatacactccccttccct 31846528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 482 - 545
Target Start/End: Original strand, 8437917 - 8437979
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccctt 545  Q
    ||||||||| |||||||| |||||  ||||| |||||||||||||||||||||||||| |||||    
T  8437917 ttaaagatgtttgaattacactccactcctc-tcttatgttaaaatatacactcccctcccctt 8437979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 544
Target Start/End: Original strand, 34923861 - 34923922
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||| |||||||||||||| | |||| |||||||||||||||||||||||||| ||||    
T  34923861 cttaaagatgcttgaattatactccct-cctc-tcttatgttaaaatatacactcccctcccct 34923922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 40791810 - 40791756
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||||||||||||    
T  40791810 aaagatgcttgaattacactcctctcc-cctcttatgttaaaatatacactcccct 40791756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 17564717 - 17564757
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  17564717 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 17564757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 40791068 - 40791135
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||||||||   ||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  40791068 aaagatgtttgaattatactctcctcc-cctcttatgttaaaatatacactaccc-tcccttgaaaagta 40791135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 34925432 - 34925393
Alignment:
Q  513 ctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  34925432 ctcttatgttaaaatatacactcccc-tcccttgaaaagta 34925393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 553
Target Start/End: Complemental strand, 12336322 - 12336280
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||    
T  12336322 ctcctcttatgttaaaatatacacttccc-tcccttgaaaagta 12336280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 551
Target Start/End: Complemental strand, 14094205 - 14094140
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||| |||||||||| ||||||||||||    
T  14094205 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatttacactcccc-tcccttgaaaag 14094140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 553
Target Start/End: Complemental strand, 8443354 - 8443313
Alignment:
Q  511 tcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||  |||||||||||||||||    
T  8443354 tcctcttatgttaaaatatacact-tccttcccttgaaaagta 8443313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 544
Target Start/End: Original strand, 13421488 - 13421522
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||||| ||||    
T  13421488 ctcctcttatgttaaaatatacactcccctcccct 13421522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 544
Target Start/End: Original strand, 30353864 - 30353925
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||| |||||||| ||| | ||| |||||||||||||||||||||||| |||| ||||    
T  30353864 ttaaagatgcttgaattacacttccttc-tcctcttatgttaaaatatacacttccctcccct 30353925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 36016814 - 36016748
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| | |||  ||||| ||||||||||||||||||||||||  ||||||||||||||    
T  36016814 aaagatgcttgaattacaatcccctcctc-tcttatgttaaaatatacactccc--tcccttgaaaagta 36016748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 253572 - 253612
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  253572 cctcttatgttaaaatatacactcctc-tcccttgaaaagta 253612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 662286 - 662246
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  662286 cctcttatgttaaaatatacactcctc-tcccttgaaaagta 662246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 848084 - 848044
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  848084 cctcttatgttaaaatatacactcctc-tcccttgaaaagta 848044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 537
Target Start/End: Original strand, 3075328 - 3075380
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccc 537  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||||    
T  3075328 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactccc 3075380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 31740177 - 31740137
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  31740177 cctcttatattaaaatatacactcccc-tcccttgaaaagta 31740137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 37266170 - 37266130
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  37266170 cctcttatgttaaaatatacactccac-tcccttgaaaagta 37266130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 37872895 - 37872855
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||| ||||||| ||||||||||||    
T  37872895 cctcttatgttaaaatatacattcccctt-ccttgaaaagta 37872855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 539
Target Start/End: Complemental strand, 41312437 - 41312381
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    ||||||||| |||||||| |||||  ||| ||||||||||||||||||||| ||||||    
T  41312437 ttaaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacattcccct 41312381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 545
Target Start/End: Original strand, 43764100 - 43764160
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccctt 545  Q
    ||||||| |||||||| ||| || ||| |||||||||||||||||||||||| ||| |||||    
T  43764100 aaagatgtttgaattacacttctctcc-cctcttatgttaaaatatacactctcctcccctt 43764160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 539
Target Start/End: Complemental strand, 44746869 - 44746840
Alignment:
Q  510 ctcctcttatgttaaaatatacactcccct 539  Q
    ||||||||||||||||||||||||||||||    
T  44746869 ctcctcttatgttaaaatatacactcccct 44746840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 8442678 - 8442737
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||||  |||| |||||||||||||||||||||| ||||| ||||    
T  8442678 aaagatgcttgaattacactctcttcc-cctcttatgttaaaatatacacacccctaccct 8442737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 11140143 - 11140175
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  11140143 cctcttatgttaaaatatacactcccctcccct 11140175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 14880243 - 14880184
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||| |||| ||||    
T  14880243 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacacttccctcccct 14880184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 536
Target Start/End: Complemental strand, 17565393 - 17565342
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcc 536  Q
    ||||||| || ||||| |||||| ||| |||||||||||||||||||||||||    
T  17565393 aaagatgcttcaattacactcctctcc-cctcttatgttaaaatatacactcc 17565342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 22934311 - 22934370
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  22934311 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 22934370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 25485481 - 25485422
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  25485481 aaagatgtttgaattacactcccctcc-cctcttaagttaaaatatacactcccctaccct 25485422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 31739558 - 31739590
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  31739558 cctcttatgttaaaatatacactcccctcccct 31739590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 479 - 549
Target Start/End: Complemental strand, 1364111 - 1364042
Alignment:
Q  479 ttcttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaa 549  Q
    |||| ||||||| |||||||| |||||  || ||||||||||||||||||||||||||||| |||||||||    
T  1364111 ttctcaaagatgtttgaattacactcccatc-tcctcttatgttaaaatatacactcccctccccttgaaa 1364042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 23682013 - 23682077
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  23682013 aaagatgcttgagttatactcctctcc-cctcttatgttaaaatatacactcccc-tcccttgaaaa 23682077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 24054250 - 24054314
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||| |||| |||||||||| ||| ||||||||||||||||||||||||||| |||||||||||    
T  24054250 aaagatgcttgagttatactcctctcc-cctcttatgttaaaatatacactcccc-tcccttgaaaa 24054314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 481 - 551
Target Start/End: Complemental strand, 47794709 - 47794640
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    |||||||||| |||||||| |||||  || |||||||||||||||||||||| ||||| ||||||||||||    
T  47794709 cttaaagatgtttgaattacactcccctc-tcctcttatgttaaaatatacattccccctcccttgaaaag 47794640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 492 - 551
Target Start/End: Complemental strand, 41587357 - 41587300
Alignment:
Q  492 ttgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||    
T  41587357 ttgaattacactcctctcc-cctcttatgttaaaatatacactcccc-tcccttgaaaag 41587300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 542
Target Start/End: Complemental strand, 2756661 - 2756604
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcc 542  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||||||    
T  2756661 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactccccttcc 2756604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 18364652 - 18364716
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||||| |||||||||||    
T  18364652 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccc-tcccttgaaaa 18364716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 17764989 - 17764949
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  17764989 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 17764949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 19066309 - 19066269
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  19066309 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 19066269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 54403581 - 54403648
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||| ||| ||||||||||||||    
T  54403581 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacacttccc-tcccttgaaaagta 54403648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 18365335 - 18365276
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||| ||||    
T  18365335 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccctcccct 18365276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 53490757 - 53490718
Alignment:
Q  513 ctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  53490757 ctcttatgttaaaatatacactcccc-tcccttgaaaagta 53490718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 551
Target Start/End: Original strand, 291158 - 291196
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  291158 cctcttatgttaaaatatacactcccc-tcccttgaaaag 291196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 551
Target Start/End: Complemental strand, 3090445 - 3090407
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  3090445 cctcttatgttaaaatatacactcccc-tcccttgaaaag 3090407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 544
Target Start/End: Original strand, 4558051 - 4558113
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  4558051 cttaaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 4558113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 11345413 - 11345359
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||||||    
T  11345413 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccct 11345359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 544
Target Start/End: Original strand, 11581855 - 11581917
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||| |||||||| | | || ||| |||||||||||||||||||||||||||| ||||    
T  11581855 cttaaagatgtttgaattacatttctctcc-cctcttatgttaaaatatacactcccctcccct 11581917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 487 - 549
Target Start/End: Original strand, 54605787 - 54605847
Alignment:
Q  487 gatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaa 549  Q
    |||| |||||||| |||||  ||| ||||||||||||||||||||||||||| ||||||||||    
T  54605787 gatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccc-tcccttgaaa 54605847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 544
Target Start/End: Complemental strand, 54606453 - 54606419
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||||| ||||    
T  54606453 ctcctcttatgttaaaatatacactcccctcccct 54606419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 1262419 - 1262486
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||| || || |||||||||||    
T  1262419 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactctcc-tctcttgaaaagta 1262486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 534
Target Start/End: Original strand, 25480546 - 25480598
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacact 534  Q
    |||||||||| ||||||||||||||  ||| | |||||||||||||||||||||    
T  25480546 cttaaagatgcttgaattatactcccctcc-catcttatgttaaaatatacact 25480598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 561
Target Start/End: Complemental strand, 32222136 - 32222069
Alignment:
Q  492 ttgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagtataatctac 561  Q
    |||||||| ||||| |||| | |||||||||||||||||||||  |||| |||||||||||| |||||||    
T  32222136 ttgaattacactcccttcc-cttcttatgttaaaatatacacttacctt-ccttgaaaagtaaaatctac 32222069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 40036423 - 40036383
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  40036423 cctcttatgttaaaatatacactcccc-tcccttgcaaagta 40036383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 44500097 - 44500030
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||| ||| || |||||||||||    
T  44500097 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacacttccc-tctcttgaaaagta 44500030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 549
Target Start/End: Complemental strand, 49765183 - 49765120
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaa 549  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||| ||||| ||||||||||    
T  49765183 aaagatgtttgaattacactcccctcc-cctcttatgttaaaatatacattcccc-tcccttgaaa 49765120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 3089799 - 3089831
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  3089799 cctcttatgttaaaatatacactcccctcccct 3089831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 5963106 - 5963138
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  5963106 cctcttatgttaaaatatacactcccctcccct 5963138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 10887732 - 10887791
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  10887732 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 10887791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 37183100 - 37183159
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  37183100 aaagatgtttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 37183159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 40927542 - 40927574
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  40927542 cctcttatgttaaaatatacactcccctcccct 40927574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 25 - 73
Target Start/End: Complemental strand, 43921714 - 43921666
Alignment:
Q  25 tgtcggacaccgtaacacggttggttcaagaggtgtccgtgcttcatag 73  Q
    ||||||||||||| |||||| | || | |||||||||||||||||||||    
T  43921714 tgtcggacaccgtgacacggctagtcctagaggtgtccgtgcttcatag 43921666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Complemental strand, 49080636 - 49080604
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  49080636 cctcttatgttaaaatatacactcccctcccct 49080604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 53490071 - 53490129
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||| | |||| |||||||||||||||||||||| ||||||||||    
T  53490071 aaagatgcttgaattacacttcattcc-cctcttatgttaaaatatacac-ccccttccct 53490129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 30)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 484 - 542
Target Start/End: Complemental strand, 4438033 - 4437976
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcc 542  Q
    ||||||| |||||||| |||||| ||| |||||||||||||||||||||||||||||||    
T  4438033 aaagatgtttgaattacactcctctcc-cctcttatgttaaaatatacactccccttcc 4437976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 37009714 - 37009647
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| || ||||| |||||| ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  37009714 aaagatgcttaaattacactcctctcc-cctcttatgttaaaatatacactcccc-tcccttgaaaagta 37009647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 37199654 - 37199587
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  37199654 aaagatgtttgaattacactcccctcc-cctcttatgttaaaatatacactcccc-tcccttgaaaagta 37199587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 6229912 - 6229872
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  6229912 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 6229872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 34173768 - 34173701
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  34173768 aaagatgtttgaattacactcccctcc-cctcttatgttaaaatatacattcccc-tcccttgaaaagta 34173701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 17829070 - 17829129
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||| ||||    
T  17829070 aaagatgcttgaattacactccactcc-cctcttatgttaaaatatacactcccctcccct 17829129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 512 - 551
Target Start/End: Original strand, 33146081 - 33146119
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    ||||||||||||||||||||||||||| ||||||||||||    
T  33146081 cctcttatgttaaaatatacactcccc-tcccttgaaaag 33146119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 511 - 550
Target Start/End: Original strand, 37329745 - 37329783
Alignment:
Q  511 tcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    |||||||||||||||||||||||||||| |||||||||||    
T  37329745 tcctcttatgttaaaatatacactcccc-tcccttgaaaa 37329783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 512 - 542
Target Start/End: Original strand, 3044974 - 3045004
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcc 542  Q
    |||||||||||||||||||||||||||||||    
T  3044974 cctcttatgttaaaatatacactccccttcc 3045004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 544
Target Start/End: Complemental strand, 10357177 - 10357116
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    |||| |||| |||||||| |||||  ||| |||||||||||||||||||||||||||| ||||    
T  10357177 ttaatgatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccctcccct 10357116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 480 - 534
Target Start/End: Original strand, 38910690 - 38910743
Alignment:
Q  480 tcttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacact 534  Q
    ||||||||||| |||||||| |||||  ||||| |||||||||||||||||||||    
T  38910690 tcttaaagatgtttgaattacactcccctcctc-tcttatgttaaaatatacact 38910743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 3515500 - 3515460
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  3515500 cctcttatgttaaaatatacactcccc-tcctttgaaaagta 3515460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 11564496 - 11564456
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  11564496 cctcttatgttaaaatatacactctcc-tcccttgaaaagta 11564456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 534
Target Start/End: Complemental strand, 11942995 - 11942943
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacact 534  Q
    |||||||||| ||||||||||||| | || |||| |||||||||||||||||||    
T  11942995 cttaaagatgtttgaattatactcatctc-tccttttatgttaaaatatacact 11942943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 13874042 - 13873990
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactc 535  Q
    ||||||||| |||||||| |||| | ||||| ||||||||||||||||||||||    
T  13874042 ttaaagatgtttgaattacactcttctcctc-tcttatgttaaaatatacactc 13873990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 535
Target Start/End: Complemental strand, 14014167 - 14014115
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactc 535  Q
    ||||||||| |||||||| |||| | ||||| ||||||||||||||||||||||    
T  14014167 ttaaagatgtttgaattacactcttctcctc-tcttatgttaaaatatacactc 14014115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 28167559 - 28167626
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||| |||||  | | |||||||||||||||||||||||| || |||||| |||||||    
T  28167559 aaagatgattgaattacactccccttc-cctcttatgttaaaatatacactctcc-tcccttaaaaagta 28167626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 31597271 - 31597311
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||| ||||||| ||||||||||||||    
T  31597271 cctcttatgttaaaatataaactcccc-tcccttgaaaagta 31597311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 31709113 - 31709153
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  31709113 cctcttatgttaaaatatacacttccctt-ccttgaaaagta 31709153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 40769397 - 40769357
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||| || ||||||||||||||    
T  40769397 cctcttatgttaaaatatacactctcc-tcccttgaaaagta 40769357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 4437358 - 4437390
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||||||||||||||| |||||||||||    
T  4437358 cctcttatgttaaaatatacaatccccttccct 4437390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 5474670 - 5474702
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  5474670 cctcttatgttaaaatatacactcccctcccct 5474702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 15006476 - 15006508
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  15006476 cctcttatgttaaaatatacactcccctcccct 15006508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 20894335 - 20894276
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  20894335 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 20894276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Complemental strand, 33146730 - 33146698
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  33146730 cctcttatgttaaaatatacactcccctcccct 33146698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 34173092 - 34173124
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  34173092 cctcttatgttaaaatatacactcccctcccct 34173124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 35175668 - 35175700
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  35175668 cctcttatgttaaaatatacactcccctcccct 35175700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 37198970 - 37199002
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  37198970 cctcttatgttaaaatatacactcccctcccct 37199002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Complemental strand, 41521695 - 41521663
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  41521695 cctcttatgttaaaatatacactcccctcccct 41521663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 550
Target Start/End: Complemental strand, 43439828 - 43439789
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    |||||||||||||||||||||||||| || |||||||||||    
T  43439828 ctcctcttatgttaaaatatacactctcc-tcccttgaaaa 43439789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000003; HSPs: 30)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 40401606 - 40401539
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||| ||||||||||||||||||    
T  40401606 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacact-cccttcccttgaaaagta 40401539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 32867957 - 32867898
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||| ||| |||||||||||||||||||||||||||| ||||    
T  32867957 aaagatgcttgaattacactcctctcc-cctcttatgttaaaatatacactcccctcccct 32867898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 498 - 553
Target Start/End: Complemental strand, 16426050 - 16425997
Alignment:
Q  498 tatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  16426050 tatactcccttcc-cctcttatgttaaaatatacactcccc-tcccttgaaaagta 16425997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 20261609 - 20261569
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  20261609 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 20261569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 31221510 - 31221443
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| | ||||||||||||||||||||||||| ||||||||||||||    
T  31221510 aaagatgcttgaattacactcccctcc-cttcttatgttaaaatatacactcccc-tcccttgaaaagta 31221443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 14078376 - 14078435
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||||  |||| |||||||||||||||||||||||||||| ||||    
T  14078376 aaagatgcttgaattaaactctcttcc-cctcttatgttaaaatatacactcccctcccct 14078435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 14388404 - 14388463
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||||  |||| |||||||||||||||||||||||||||| ||||    
T  14388404 aaagatgcttgaattaaactctcttcc-cctcttatgttaaaatatacactcccctcccct 14388463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 510 - 550
Target Start/End: Complemental strand, 28308700 - 28308661
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||||||||||||||||||||||||| |||||||||||    
T  28308700 ctcctcttatgttaaaatatacactcccc-tcccttgaaaa 28308661  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 48872059 - 48872098
Alignment:
Q  513 ctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  48872059 ctcttatgttaaaatatacactcccc-tcccttgaaaagta 48872098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 481 - 544
Target Start/End: Complemental strand, 25607669 - 25607607
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  25607669 cttaaagatgtttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 25607607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 534
Target Start/End: Complemental strand, 2935815 - 2935766
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacact 534  Q
    ||||||| |||||||| ||||| |||| |||||||||||||||||||||||    
T  2935815 aaagatgcttgaattacactcccttcc-cctcttatgttaaaatatacact 2935766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 510 - 544
Target Start/End: Original strand, 33869238 - 33869272
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||||| ||||    
T  33869238 ctcctcttatgttaaaatatacactcccctcccct 33869272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 3391804 - 3391844
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| |||||| |||||||    
T  3391804 cctcttatgttaaaatatacactcccc-tcccttaaaaagta 3391844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 11639916 - 11639983
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||| || ||| ||||||||||    
T  11639916 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactctcc-tcctttgaaaagta 11639983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 12677146 - 12677186
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| |||| |||||||||    
T  12677146 cctcttatgttaaaatatacactcccc-tcccatgaaaagta 12677186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 27619688 - 27619621
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||| | |||||| |||||||    
T  27619688 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcctc-tcccttaaaaagta 27619621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 538
Target Start/End: Original strand, 36687313 - 36687369
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccc 538  Q
    |||||||||| |||||||| ||| |  ||| |||||||||||||||||||||||||||    
T  36687313 cttaaagatgcttgaattacacttccctcc-cctcttatgttaaaatatacactcccc 36687369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 481 - 534
Target Start/End: Complemental strand, 36848555 - 36848503
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacact 534  Q
    |||||||||| |||||||| |||| | || ||||||||||||||||||||||||    
T  36848555 cttaaagatgcttgaattacactcttctc-tcctcttatgttaaaatatacact 36848503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 38987772 - 38987839
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||| | || |||||||||||    
T  38987772 aaagatgcttgaattaaactcccctcc-cctcttatgttaaaatatacactccac-tctcttgaaaagta 38987839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 25276 - 25335
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  25276 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 25335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 317298 - 317357
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  317298 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 317357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 510 - 538
Target Start/End: Complemental strand, 14753906 - 14753878
Alignment:
Q  510 ctcctcttatgttaaaatatacactcccc 538  Q
    |||||||||||||||||||||||||||||    
T  14753906 ctcctcttatgttaaaatatacactcccc 14753878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 19156130 - 19156071
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||| | ||| ||||||||||||||||||||||| |||| ||||    
T  19156130 aaagatgtttgaattacactcatctcc-cctcttatgttaaaatatacacttccctcccct 19156071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 20755529 - 20755470
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||| | ||| ||||||||||||||||||||||| |||| ||||    
T  20755529 aaagatgtttgaattacactcatctcc-cctcttatgttaaaatatacacttccctcccct 20755470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 27144228 - 27144260
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  27144228 cctcttatgttaaaatatacactcccctcccct 27144260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 538
Target Start/End: Complemental strand, 27144897 - 27144842
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccc 538  Q
    ||||||||| |||||||| |||| | || || |||||||||||||||||||||||||    
T  27144897 ttaaagatgcttgaattacactcttctc-tcttcttatgttaaaatatacactcccc 27144842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 34999232 - 34999264
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  34999232 cctcttatgttaaaatatacactcccctcccct 34999264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 553
Target Start/End: Complemental strand, 36688917 - 36688847
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||  |||||||| |||||  ||| |||||||||||||||||||||||  || ||||||||||||||    
T  36688917 cttaaagatctttgaattacactcccctcc-cctcttatgttaaaatatacactttcc-tcccttgaaaagta 36688847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 36847879 - 36847911
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  36847879 cctcttatgttaaaatatacactcccctcccct 36847911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Complemental strand, 48982566 - 48982534
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  48982566 cctcttatgttaaaatatacactcccctcccct 48982534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 38; Significance: 0.000000000003; HSPs: 19)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 16536391 - 16536458
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||||| ||||||||||||||    
T  16536391 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccc-tcccttgaaaagta 16536458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 481 - 544
Target Start/End: Original strand, 8061042 - 8061104
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||| |||||||| ||||   ||||| |||||||||||||||||||||||||||||||    
T  8061042 cttaaagatgcttgaattacactctcctcctc-tcttatgttaaaatatacactccccttccct 8061104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 45559819 - 45559752
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  || |||||||||||||||||||||| ||||||| ||||||||||||    
T  45559819 aaagatgcttgaattacactcccatc-tcctcttatgttaaaatatacaatcccctt-ccttgaaaagta 45559752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Original strand, 17109352 - 17109391
Alignment:
Q  513 ctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  17109352 ctcttatgttaaaatatacactcccc-tcccttgaaaagta 17109391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 482 - 550
Target Start/End: Original strand, 18406547 - 18406613
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||||| |||||||| |||||  ||||| ||||||||||||||||||||| ||| |||||||||||    
T  18406547 ttaaagatgcttgaattacactcccctcctc-tcttatgttaaaatatacactaccc-tcccttgaaaa 18406613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 550
Target Start/End: Original strand, 31765351 - 31765417
Alignment:
Q  480 tcttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    |||||||||||  ||||||| |||||||||||   |||||||| ||||||||||||||| |||||||||||    
T  31765351 tcttaaagatgcatgaattacactcctttcct---cttatgttcaaatatacactcccc-tcccttgaaaa 31765417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 45738725 - 45738666
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||||||| |||| ||||    
T  45738725 aaagatgcttgaattacactcctctcc-cctcttatgttaaaatatacacttccctcccct 45738666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 510 - 541
Target Start/End: Original strand, 46682719 - 46682750
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttc 541  Q
    ||||||||||||||||||||||||||||||||    
T  46682719 ctcctcttatgttaaaatatacactccccttc 46682750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 486 - 557
Target Start/End: Original strand, 50143406 - 50143475
Alignment:
Q  486 agatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagtataat 557  Q
    ||||| |||||||| |||||  ||| ||||||||||||||||||||| ||||| ||||||||||| ||||||    
T  50143406 agatgtttgaattacactcccctcc-cctcttatgttaaaatatacattcccc-tcccttgaaaaatataat 50143475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 542
Target Start/End: Original strand, 28044498 - 28044555
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcc 542  Q
    ||||||| |||||||||||||| ||| || | |||||||||||||||||||| ||||||    
T  28044498 aaagatgcttgaattatactcccttcgtctt-ttatgttaaaatatacactctccttcc 28044555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 544
Target Start/End: Complemental strand, 29510535 - 29510474
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||| |||||||| |||||  | | |||||||||||||||||||||||||||| ||||    
T  29510535 ttaaagatgtttgaattacactccccttc-cctcttatgttaaaatatacactcccctcccct 29510474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 550
Target Start/End: Original strand, 45737324 - 45737388
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||| || |||||||||||    
T  45737324 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactctcc-tcccttgaaaa 45737388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 27225722 - 27225762
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  27225722 cctcttatgttaaaatatacacttccc-tcccttgaaaagta 27225762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 36604746 - 36604813
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||| | | ||||||||||||||||||||||| ||| ||| ||||||||||    
T  36604746 aaagatgcttgaattacactcctcttc-cctcttatgttaaaatatacacttccc-tcctttgaaaagta 36604813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 545
Target Start/End: Complemental strand, 45195266 - 45195233
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccctt 545  Q
    |||||||||||||||||||||||||||| |||||    
T  45195266 cctcttatgttaaaatatacactcccctcccctt 45195233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 19072413 - 19072354
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||||| |||||| ||||||||||||||||||| ||||    
T  19072413 aaagatgtttgaattacactcccctcctc-tcttatattaaaatatacactcccctcccct 19072354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 19120303 - 19120244
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||||| |||||| ||||||||||||||||||| ||||    
T  19120303 aaagatgtttgaattacactcccctcctc-tcttatattaaaatatacactcccctcccct 19120244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 41575193 - 41575252
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||| | | |||||||||||||||||| ||||||||| ||||    
T  41575193 aaagatgcttgaattacactcctcttc-cctcttatgttaaaatatgcactcccctcccct 41575252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 42831228 - 42831189
Alignment:
Q  513 ctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  42831228 ctcttatgttaaaatatacactcccc-tcctttgaaaagta 42831189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 37; Significance: 0.00000000001; HSPs: 18)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 35751536 - 35751595
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||||| |||| |||||||||||||||||||||||||||| ||||    
T  35751536 aaagatgcttgaattacactcccttcc-cctcttatgttaaaatatacactcccctcccct 35751595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 27979251 - 27979318
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||| ||||| ||||||||||||||    
T  27979251 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacattcccc-tcccttgaaaagta 27979318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 481 - 550
Target Start/End: Complemental strand, 36737506 - 36737439
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    |||||||||| |||||||| |||||  ||| ||||||||||||||||||||||| ||| |||||||||||    
T  36737506 cttaaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacacttccc-tcccttgaaaa 36737439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 480 - 536
Target Start/End: Original strand, 9118851 - 9118906
Alignment:
Q  480 tcttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcc 536  Q
    ||||||||||| |||||||| ||||| ||||| |||||| |||||||||||||||||    
T  9118851 tcttaaagatgtttgaattacactcccttcct-ctcttaagttaaaatatacactcc 9118906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 19408559 - 19408618
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||| ||||    
T  19408559 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccctcccct 19408618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 20183380 - 20183439
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| | |||||||||||||||||||||||||||||||    
T  20183380 aaagatgcttgaattacactcccctcc-cttcttatgttaaaatatacactccccttccct 20183439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 539
Target Start/End: Original strand, 15144432 - 15144486
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    ||||||| |||||||||| ||||||| || ||||||||||||||||||||| ||||    
T  15144432 aaagatgtttgaattatattcctttcatc-tcttatgttaaaatatacacttccct 15144486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 486 - 544
Target Start/End: Original strand, 20570150 - 20570207
Alignment:
Q  486 agatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||| |||||||| |||||  ||||| |||||||||||||||||||||||||| ||||    
T  20570150 agatgcttgaattacactcccctcctc-tcttatgttaaaatatacactcccctcccct 20570207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 8573376 - 8573336
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||| ||||||||||    
T  8573376 cctcttatgttaaaatatacactcccc-tcctttgaaaagta 8573336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 14594116 - 14594156
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  14594116 cctcttatgttaaaatatacacttccc-tcccttgaaaagta 14594156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 20260031 - 20259991
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||| | ||||||||||||||    
T  20260031 cctcttatgttaaaatatacactcctc-tcccttgaaaagta 20259991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 36762134 - 36762201
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| |||||||| |||||||||||||| ||| ||||||||||||||    
T  36762134 aaagatgcttgaattacactcccctcc-cctcttattttaaaatatacacttccc-tcccttgaaaagta 36762201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 536
Target Start/End: Complemental strand, 1932076 - 1932025
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcc 536  Q
    ||||||| ||||||||||||||  ||||| ||||||||||||||||| |||||    
T  1932076 aaagatgtttgaattatactcccctcctc-tcttatgttaaaatatatactcc 1932025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Complemental strand, 4877402 - 4877370
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  4877402 cctcttatgttaaaatatacactcccctcccct 4877370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 9017667 - 9017726
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||| |||| ||||    
T  9017667 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacacttccctcccct 9017726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 21639038 - 21639097
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||| ||| ||||    
T  21639038 aaagatgcttgaattacactccactcc-cctcttatgttaaaatatacactctcctcccct 21639097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 536
Target Start/End: Complemental strand, 27028699 - 27028644
Alignment:
Q  480 tcttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcc 536  Q
    ||||||||||| |||||||| |||||  ||||| ||||||||||||||||| |||||    
T  27028699 tcttaaagatgcttgaattacactcccctcctc-tcttatgttaaaatatatactcc 27028644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Complemental strand, 36742609 - 36742577
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  36742609 cctcttatgttaaaatatacactcccctcccct 36742577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 30)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 37708795 - 37708854
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||| ||| |||||||||||||||||||||||||||| ||||    
T  37708795 aaagatgcttgaattacactcctctcc-cctcttatgttaaaatatacactcccctcccct 37708854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 544
Target Start/End: Original strand, 17722768 - 17722829
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||| ||||    
T  17722768 ttaaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccctcccct 17722829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 481 - 539
Target Start/End: Complemental strand, 45847825 - 45847768
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    |||||||||| |||||||| | |||| ||||| ||||||||||||||||||||||||||    
T  45847825 cttaaagatgcttgaattacaatcctctcctc-tcttatgttaaaatatacactcccct 45847768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 754888 - 754955
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||| ||| ||||||||||||||||||||||||  | ||||||||||||||    
T  754888 aaagatgcttgaattacactcctctcc-cctcttatgttaaaatatacactcatc-tcccttgaaaagta 754955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 13482230 - 13482270
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  13482230 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 13482270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 35665972 - 35666039
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||||||| || ||||| |||||||||||||||||||||  || ||||||||||||||    
T  35665972 aaagatgcttgaattatacttctctcctc-tcttatgttaaaatatacacttacc-tcccttgaaaagta 35666039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 55068863 - 55068930
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||||| ||||||| ||||||    
T  55068863 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccc-tcccttgtaaagta 55068930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 755581 - 755522
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| ||||||||||||||  ||| |||||||| |||||||||||||| |||||||||    
T  755581 aaagatgcttgaattatactcccctcc-cctcttatattaaaatatacacttcccttccct 755522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 26705724 - 26705665
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||||| |||||||||||||||||||||||||| ||||    
T  26705724 aaagatgcttgaattacactcccctcctc-tcttatgttaaaatatacactcccctcccct 26705665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 35667338 - 35667279
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||| ||||    
T  35667338 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccctcccct 35667279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 16192370 - 16192316
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    ||||||| |||||||| |||||  ||||| ||||||||||||||||||||||||||    
T  16192370 aaagatgcttgaattacactcccctcctc-tcttatgttaaaatatacactcccct 16192316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 539
Target Start/End: Complemental strand, 41919963 - 41919909
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    ||||||| |||||||| |||| | ||||| ||||||||||||||||||||||||||    
T  41919963 aaagatgcttgaattacactcttctcctc-tcttatgttaaaatatacactcccct 41919909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 550
Target Start/End: Complemental strand, 23722106 - 23722042
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||| ||| |||||||||||    
T  23722106 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactaccc-tcccttgaaaa 23722042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 538
Target Start/End: Complemental strand, 35667811 - 35667758
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccc 538  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||    
T  35667811 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccc 35667758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 492 - 550
Target Start/End: Original strand, 37147767 - 37147823
Alignment:
Q  492 ttgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    |||||||| |||||| ||| ||||||||||||||||||||||| ||| |||||||||||    
T  37147767 ttgaattacactcctctcc-cctcttatgttaaaatatacacttccc-tcccttgaaaa 37147823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 495 - 553
Target Start/End: Complemental strand, 51268593 - 51268537
Alignment:
Q  495 aattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||| |||||| ||||| ||||||||||||||||||||||| ||| ||||||||||||    
T  51268593 aattacactcctctcctc-tcttatgttaaaatatacactccactt-ccttgaaaagta 51268537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 492 - 553
Target Start/End: Complemental strand, 722026 - 721967
Alignment:
Q  492 ttgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||| |||||| ||| ||||||||||||||||||||||||  | ||||||||||||||    
T  722026 ttgaattacactcctctcc-cctcttatgttaaaatatacactcatc-tcccttgaaaagta 721967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 7479374 - 7479334
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  7479374 cctcttatgttaaaatatacacttccc-tcccttgaaaagta 7479334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 25010085 - 25010045
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| || |||||||||||||||    
T  25010085 cctcttatgttaaaatatacact-ccattcccttgaaaagta 25010045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 35667409 - 35667369
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  35667409 cctcttatgttaaaatatacacttccc-tcccttgaaaagta 35667369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 510 - 551
Target Start/End: Complemental strand, 36898129 - 36898089
Alignment:
Q  510 ctcctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    ||||| ||||||||||||||||||||||| ||||||||||||    
T  36898129 ctccttttatgttaaaatatacactcccc-tcccttgaaaag 36898089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 51019698 - 51019738
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  51019698 cctcttatgttaaaatatacacttccc-tcccttgaaaagta 51019738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 721342 - 721401
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| |||||||| |||||||||||||| |||||||||    
T  721342 aaagatgcttgaattacactcccctcc-cctcttatattaaaatatacacttcccttccct 721401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 796403 - 796462
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  796403 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 796462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 486 - 550
Target Start/End: Original strand, 4949956 - 4950018
Alignment:
Q  486 agatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||| |||||||| |||||  ||||| ||||||||||||||||||||| |||||||||| ||||    
T  4949956 agatgtttgaattacactcccctcctc-tcttatgttaaaatatacact-cccttcccttaaaaa 4950018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 8193045 - 8192986
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  8193045 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 8192986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 16960252 - 16960284
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  16960252 cctcttatgttaaaatatacactcccctcccct 16960284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 536
Target Start/End: Complemental strand, 16960921 - 16960878
Alignment:
Q  492 ttgaattatactcctttcctcctcttatgttaaaatatacactcc 536  Q
    ||||||||||||||  || ||||||||||||||||||||||||||    
T  16960921 ttgaattatactcccctc-tcctcttatgttaaaatatacactcc 16960878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 480 - 552
Target Start/End: Complemental strand, 30193229 - 30193159
Alignment:
Q  480 tcttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagt 552  Q
    ||||||||||| |||||||| ||||| |||| | ||||||||| |||||||| || |||||| ||||||||||    
T  30193229 tcttaaagatgtttgaattacactcccttcc-cttcttatgttgaaatatacgct-cccttctcttgaaaagt 30193159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 481 - 537
Target Start/End: Complemental strand, 33047287 - 33047232
Alignment:
Q  481 cttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccc 537  Q
    ||||||| || |||||||| |||||  ||| ||||||||||||||||||||||||||    
T  33047287 cttaaagttgtttgaattacactcccctcc-cctcttatgttaaaatatacactccc 33047232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000005; HSPs: 4)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 498 - 553
Target Start/End: Complemental strand, 14763 - 14710
Alignment:
Q  498 tatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  14763 tatactcccttcc-cctcttatgttaaaatatacactcccc-tcccttgaaaagta 14710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #2
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 498 - 553
Target Start/End: Complemental strand, 28909 - 28856
Alignment:
Q  498 tatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||    
T  28909 tatactcccttcc-cctcttatgttaaaatatacactcccc-tcccttgaaaagta 28856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Original strand, 421167 - 421234
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||||||||| ||||| ||||||||    
T  421167 aaagatgtttgaattacactcccctcc-cctcttatgttaaaatatacactcccc-tccctagaaaagta 421234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003; HSP #4
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 421984 - 421925
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||||| |||| ||||||||||| ||||||||||| |||| ||||    
T  421984 aaagatgcttgaattacactcccttcc-cctcttatgtttaaatatacacttccctcccct 421925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000005; HSPs: 25)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 492 - 539
Target Start/End: Complemental strand, 7448937 - 7448891
Alignment:
Q  492 ttgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    |||||||| |||||||||| ||||||||||||||||||||||||||||    
T  7448937 ttgaattacactcctttcc-cctcttatgttaaaatatacactcccct 7448891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 482 - 544
Target Start/End: Complemental strand, 11794824 - 11794763
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||| |||||||| |||||  ||| |||||||||||||||| ||||||||||||||||    
T  11794824 ttaaagatggttgaattacactcccatcc-cctcttatgttaaaatttacactccccttccct 11794763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 21802632 - 21802592
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  21802632 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 21802592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 484 - 553
Target Start/End: Complemental strand, 32114462 - 32114395
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||| |||||||| ||| || || |||||||||||||||||||||||||| | ||||||||||||||    
T  32114462 aaagatgcttgaattacacttctctc-tcctcttatgttaaaatatacactcctc-tcccttgaaaagta 32114395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 12026252 - 12026193
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||||||||||||||| ||||    
T  12026252 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacactcccctcccct 12026193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 12693865 - 12693924
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||| || || ||||||||||||||||||||||||||||| ||||    
T  12693865 aaagatgcttgaattacacttctctc-tcctcttatgttaaaatatacactcccctcccct 12693924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 15499523 - 15499484
Alignment:
Q  513 ctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||||| ||||||||||||||    
T  15499523 ctcttatgttaaaatatacactcccc-tcccttgaaaagta 15499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 484 - 550
Target Start/End: Complemental strand, 10702989 - 10702925
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaa 550  Q
    ||||||| |||||||| ||| || ||| ||||||||||||||||||||||| ||| |||||||||||    
T  10702989 aaagatgcttgaattacacttctctcc-cctcttatgttaaaatatacacttccc-tcccttgaaaa 10702925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 511 - 553
Target Start/End: Complemental strand, 31282274 - 31282233
Alignment:
Q  511 tcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| |||| ||||||||||||||    
T  31282274 tcctcttatgttaaaatatacac-ccccctcccttgaaaagta 31282233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 482 - 544
Target Start/End: Complemental strand, 32522560 - 32522499
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||| |||||||| |||| | || || ||||||||||||||||||||| |||||||||    
T  32522560 ttaaagatgtttgaattacactcatctcatc-tcttatgttaaaatatacacttcccttccct 32522499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 482 - 539
Target Start/End: Complemental strand, 188490 - 188434
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacactcccct 539  Q
    ||||||||| |||||||| |||||  ||| ||||||| ||||||||||||||||||||    
T  188490 ttaaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccct 188434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 2522715 - 2522755
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||| |||||||||||||||||| ||||||||||||||    
T  2522715 cctcttatattaaaatatacactcccc-tcccttgaaaagta 2522755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 14306838 - 14306878
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||||| ||||||||||||    
T  14306838 cctcttatgttaaaatatacacttccctt-ccttgaaaagta 14306878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 22342144 - 22342184
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||| ||| ||||||||||||||    
T  22342144 cctcttatgttaaaatatacacttccc-tcccttgaaaagta 22342184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 4100561 - 4100593
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  4100561 cctcttatgttaaaatatacactcccctcccct 4100593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 4125923 - 4125955
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  4125923 cctcttatgttaaaatatacactcccctcccct 4125955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 10702317 - 10702349
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  10702317 cctcttatgttaaaatatacactcccctcccct 10702349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Original strand, 11522819 - 11522878
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  11522819 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 11522878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 12033172 - 12033113
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  12033172 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 12033113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 14313904 - 14313845
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||||||||||||||||| |||||| ||||    
T  14313904 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacaatcccctcccct 14313845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 485 - 553
Target Start/End: Original strand, 22342208 - 22342274
Alignment:
Q  485 aagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||| |||||||| |||| | ||| | ||||||||||||||||||||| ||| ||||||||||||||    
T  22342208 aagatgcttgaattacactcatatcc-cttcttatgttaaaatatacacttccc-tcccttgaaaagta 22342274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 32113785 - 32113817
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  32113785 cctcttatgttaaaatatacactcccctcccct 32113817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 32130982 - 32131014
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    ||||||||||||||||||||||| |||||||||    
T  32130982 cctcttatgttaaaatatacacttcccttccct 32131014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 492 - 532
Target Start/End: Original strand, 32521863 - 32521902
Alignment:
Q  492 ttgaattatactcctttcctcctcttatgttaaaatataca 532  Q
    |||||||| |||||||||| |||||||||||||||||||||    
T  32521863 ttgaattacactcctttcc-cctcttatgttaaaatataca 32521902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 482 - 534
Target Start/End: Complemental strand, 34794579 - 34794528
Alignment:
Q  482 ttaaagatgattgaattatactcctttcctcctcttatgttaaaatatacact 534  Q
    ||||||||| |||||||| |||||  ||| |||||||||||||||||||||||    
T  34794579 ttaaagatgcttgaattacactcccctcc-cctcttatgttaaaatatacact 34794528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 11336 - 11376
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  11336 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 11376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0068 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0068
Description:

Target: scaffold0068; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 512 - 553
Target Start/End: Original strand, 59307 - 59347
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    ||||||||||||||||||||||||||| ||||||||||||||    
T  59307 cctcttatgttaaaatatacactcccc-tcccttgaaaagta 59347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0340 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0340
Description:

Target: scaffold0340; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 12914 - 12855
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| ||||  |||||| ||||||||||||||||||| |||||||||||    
T  12914 aaagatgtttgaattacactctcttcctc-tcttatgttaaaatatacattccccttccct 12855  T

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Target: scaffold0695 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0695
Description:

Target: scaffold0695; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 484 - 551
Target Start/End: Original strand, 2243 - 2308
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttcccttgaaaag 551  Q
    ||||||| |||||||| |||||  ||| |||||||||||||||| |||||||||| ||||||||||||    
T  2243 aaagatgcttgaattacactcccctcc-cctcttatgttaaaatttacactcccc-tcccttgaaaag 2308  T

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Target: scaffold0001 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 512 - 553
Target Start/End: Complemental strand, 185212 - 185172
Alignment:
Q  512 cctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||| |||| ||||||||||||    
T  185212 cctcttatgttaaaatatacactctcctt-ccttgaaaagta 185172  T

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Target: scaffold0368 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0368
Description:

Target: scaffold0368; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 513 - 553
Target Start/End: Complemental strand, 11284 - 11245
Alignment:
Q  513 ctcttatgttaaaatatacactccccttcccttgaaaagta 553  Q
    |||||||||||||||||||||||||| ||| ||||||||||    
T  11284 ctcttatgttaaaatatacactcccc-tcctttgaaaagta 11245  T

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Target: scaffold0289 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0289
Description:

Target: scaffold0289; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 512 - 544
Target Start/End: Original strand, 3455 - 3487
Alignment:
Q  512 cctcttatgttaaaatatacactccccttccct 544  Q
    |||||||||||||||||||||||||||| ||||    
T  3455 cctcttatgttaaaatatacactcccctcccct 3487  T

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Target: scaffold0201 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0201
Description:

Target: scaffold0201; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 15383 - 15324
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  || ||||||| |||||||||||| |||||||||||||    
T  15383 aaagatgcttgaattacactcccgtc-tcctcttttgttaaaatatagactccccttccct 15324  T

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Target: scaffold0105 (Bit Score: 29; Significance: 0.0000008; HSPs: 1)
Name: scaffold0105
Description:

Target: scaffold0105; HSP #1
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 484 - 544
Target Start/End: Complemental strand, 19701 - 19642
Alignment:
Q  484 aaagatgattgaattatactcctttcctcctcttatgttaaaatatacactccccttccct 544  Q
    ||||||| |||||||| |||||  ||| ||||||| |||||||||||||||||||| ||||    
T  19701 aaagatgcttgaattacactcccctcc-cctcttaagttaaaatatacactcccctcccct 19642  T

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