View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20821_low_39 (Length: 307)
Name: NF20821_low_39
Description: NF20821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20821_low_39 |
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Alignment Details
Target: chr8 (Bit Score: 268; Significance: 1e-149; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 268; E-Value: 1e-149
Query Start/End: Original strand, 3 - 289
Target Start/End: Original strand, 29145866 - 29146153
Alignment:
| Q |
3 |
agagaaaattaactaaggtacataacataacaaaagctatagctagctaaaaactaaggtcacaaaacattgacaactatatatttt-ttcctccttggt |
101 |
Q |
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|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |
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| T |
29145866 |
agagaaaattaactaaggtacataacataataaaagctatagctagctaaaaactaaggtcacaaaacattgacaactatatatttttttcctccttggt |
29145965 |
T |
|
| Q |
102 |
acaatcaattagcactttcaacatgacgtataaacgcattttctaaatctggtgctttaaaaaactctcttacaacaccactacgttggtagttccactt |
201 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |
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| T |
29145966 |
acaatcaattagcactttcaacatgacgtataaacacattttctaaatctggtgctttaaaaaactctcttacaacaccactactttggtagttccactt |
29146065 |
T |
|
| Q |
202 |
caaagaagatttttgcttcctaggagcaggtggacaagtgaatgatgttggaatttttgattcctcatttgttggtgttgaacattct |
289 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
29146066 |
caaagaagatttttgcttcctaggagcaggtggacaagtgaatgatgttggaatttttgattcctcatttgttggtgttgaacattct |
29146153 |
T |
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