View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20821_low_54 (Length: 267)
Name: NF20821_low_54
Description: NF20821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20821_low_54 |
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Alignment Details
Target: chr7 (Bit Score: 193; Significance: 1e-105; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 10 - 259
Target Start/End: Complemental strand, 47837309 - 47837064
Alignment:
| Q |
10 |
ataatactcaacgacctaataattctgtagtaattcatgttcttggatgctaagaaagaaaaccctccactataagtacatatatatcaaccataacaca |
109 |
Q |
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| T |
47837309 |
ataatactcaacgacctaataattctgtagtaattcatgttcttggatgctaagaaagaaaaccctccaccaaaagtacatatatatcaaccataacaca |
47837210 |
T |
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| Q |
110 |
caaagcattcccatgtatttcaacaagaacaaattaatgagaaagattattcaagtgcatgcatgtcgcatgaatgttatgtgtattataaatttcaatn |
209 |
Q |
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||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47837209 |
caaagcattcccatgtatttcaataagaacaaattaatgagaaaaattattcaagtgcatgcatgtcgcatgaatgttatgtgtattataaatttcaat- |
47837111 |
T |
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| Q |
210 |
nnnnnnnnnnntcacccccttagtaaaagaaaaaacataacccttaatta |
259 |
Q |
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| T |
47837110 |
---aaaaaaaatcacccccttagtaaaagaaaaaacataacccttaatta |
47837064 |
T |
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