View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20821_low_75 (Length: 215)
Name: NF20821_low_75
Description: NF20821
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20821_low_75 |
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Alignment Details
Target: chr4 (Bit Score: 204; Significance: 1e-111; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 204; E-Value: 1e-111
Query Start/End: Original strand, 1 - 208
Target Start/End: Original strand, 41232505 - 41232712
Alignment:
| Q |
1 |
gattgttggtgtgttatcattgtcataaatgcaaactgaaaaaataataattttgaagtgatgcatgcgatactaattcaagggtacattttaaaaagat |
100 |
Q |
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| T |
41232505 |
gattgttggtgtgttaccattgtcataaatgcaaactgaaaaaataataattttgaagtgatgcatgcgatactaattcaagggtacattttaaaaagat |
41232604 |
T |
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| Q |
101 |
taactaaaactacattgaaaatgaaagtaacaaatataacatgatttatgaattgaaatatatactttagggggagcttgtggctttggagaatatggaa |
200 |
Q |
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| T |
41232605 |
taactaaaactacattgaaaatgaaagtaacaaatataacatgatttatgaattgaaatatatactttagggggagcttgtggctttggagaatatggaa |
41232704 |
T |
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| Q |
201 |
ggacagtg |
208 |
Q |
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|||||||| |
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| T |
41232705 |
ggacagtg |
41232712 |
T |
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