View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20822_low_18 (Length: 264)

Name: NF20822_low_18
Description: NF20822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20822_low_18
NF20822_low_18
[»] chr5 (39 HSPs)
chr5 (38-244)||(39776539-39776740)
chr5 (133-247)||(30355023-30355136)
chr5 (133-247)||(38916399-38916513)
chr5 (134-247)||(978077-978190)
chr5 (133-247)||(33387219-33387333)
chr5 (134-247)||(9502776-9502889)
chr5 (133-247)||(8086179-8086293)
chr5 (145-247)||(14634306-14634408)
chr5 (165-243)||(11251145-11251223)
chr5 (145-247)||(33587618-33587720)
chr5 (134-247)||(24992287-24992400)
chr5 (134-247)||(40156198-40156311)
chr5 (145-247)||(3472426-3472528)
chr5 (149-243)||(13812062-13812156)
chr5 (131-248)||(34111959-34112076)
chr5 (131-247)||(18094230-18094346)
chr5 (196-247)||(11761128-11761179)
chr5 (134-244)||(12007784-12007894)
chr5 (178-232)||(35825006-35825060)
chr5 (196-244)||(7224227-7224275)
chr5 (144-247)||(11785874-11785978)
chr5 (207-247)||(32400400-32400440)
chr5 (204-247)||(9050725-9050768)
chr5 (196-247)||(32017275-32017326)
chr5 (145-236)||(37495621-37495712)
chr5 (193-246)||(20692541-20692592)
chr5 (145-237)||(25330234-25330325)
chr5 (207-247)||(3422359-3422399)
chr5 (191-247)||(18998744-18998800)
chr5 (207-247)||(27579579-27579619)
chr5 (131-210)||(18598541-18598620)
chr5 (196-247)||(26387028-26387079)
chr5 (131-232)||(5947715-5947816)
chr5 (170-247)||(40267944-40268020)
chr5 (144-216)||(7750066-7750138)
chr5 (207-247)||(12359970-12360010)
chr5 (196-247)||(12447567-12447616)
chr5 (207-247)||(24916395-24916435)
chr5 (203-247)||(27109757-27109801)
[»] chr1 (36 HSPs)
chr1 (129-247)||(11641216-11641334)
chr1 (133-247)||(6402559-6402673)
chr1 (132-247)||(36757635-36757750)
chr1 (131-247)||(6766369-6766485)
chr1 (131-247)||(40771921-40772037)
chr1 (145-247)||(28030830-28030932)
chr1 (129-247)||(16120589-16120707)
chr1 (131-247)||(27292637-27292753)
chr1 (132-247)||(30003531-30003646)
chr1 (133-247)||(17305953-17306067)
chr1 (132-247)||(24321257-24321374)
chr1 (133-247)||(42788691-42788805)
chr1 (144-247)||(38153426-38153529)
chr1 (133-247)||(30701717-30701831)
chr1 (133-247)||(44647862-44647976)
chr1 (131-247)||(26910073-26910189)
chr1 (148-247)||(40977637-40977736)
chr1 (145-247)||(36399109-36399211)
chr1 (145-247)||(42735314-42735419)
chr1 (163-246)||(48375031-48375114)
chr1 (133-247)||(52024025-52024139)
chr1 (134-247)||(30385294-30385407)
chr1 (149-245)||(3485358-3485454)
chr1 (133-241)||(44644510-44644618)
chr1 (145-247)||(9342794-9342896)
chr1 (145-247)||(15382575-15382677)
chr1 (147-247)||(15912485-15912585)
chr1 (202-247)||(22575736-22575781)
chr1 (163-247)||(4302147-4302231)
chr1 (196-247)||(32898572-32898623)
chr1 (132-247)||(19711841-19711952)
chr1 (197-247)||(31444986-31445036)
chr1 (192-246)||(34634965-34635019)
chr1 (134-247)||(40800536-40800649)
chr1 (179-247)||(42367445-42367513)
chr1 (145-244)||(48526836-48526935)
[»] chr7 (52 HSPs)
chr7 (145-247)||(42890492-42890594)
chr7 (133-247)||(28061664-28061778)
chr7 (134-247)||(36623308-36623421)
chr7 (134-247)||(47156027-47156140)
chr7 (145-247)||(7438914-7439016)
chr7 (133-247)||(38851996-38852110)
chr7 (133-247)||(41897987-41898101)
chr7 (134-247)||(48602436-48602549)
chr7 (177-244)||(26161639-26161706)
chr7 (145-247)||(36341631-36341733)
chr7 (145-247)||(36585120-36585222)
chr7 (145-247)||(40256068-40256170)
chr7 (134-247)||(40090067-40090180)
chr7 (133-247)||(16778504-16778618)
chr7 (134-247)||(20885103-20885216)
chr7 (134-247)||(32431507-32431620)
chr7 (134-247)||(41088587-41088700)
chr7 (163-247)||(44732041-44732125)
chr7 (196-247)||(46103519-46103570)
chr7 (133-247)||(6766699-6766813)
chr7 (145-247)||(7457871-7457972)
chr7 (145-247)||(27045557-27045659)
chr7 (178-247)||(2198646-2198715)
chr7 (145-237)||(3785531-3785623)
chr7 (163-247)||(30342103-30342187)
chr7 (163-247)||(35117155-35117238)
chr7 (163-247)||(39130075-39130159)
chr7 (134-234)||(46322127-46322227)
chr7 (145-247)||(6174847-6174949)
chr7 (145-247)||(7169137-7169239)
chr7 (149-239)||(8683833-8683923)
chr7 (134-247)||(42877386-42877499)
chr7 (196-247)||(11502729-11502780)
chr7 (145-247)||(4131652-4131754)
chr7 (145-247)||(25566697-25566798)
chr7 (145-247)||(46479840-46479942)
chr7 (145-247)||(5529022-5529124)
chr7 (134-214)||(45331915-45331992)
chr7 (165-247)||(49101962-49102044)
chr7 (178-232)||(49110634-49110688)
chr7 (200-248)||(37467455-37467503)
chr7 (196-232)||(42662248-42662284)
chr7 (196-247)||(3851136-3851187)
chr7 (177-247)||(5788526-5788596)
chr7 (182-247)||(34750550-34750615)
chr7 (178-247)||(41134637-41134701)
chr7 (207-247)||(19120679-19120719)
chr7 (207-247)||(21379817-21379857)
chr7 (207-247)||(23707572-23707612)
chr7 (207-247)||(35570198-35570238)
chr7 (196-232)||(38767223-38767259)
chr7 (207-247)||(47525985-47526025)
[»] chr4 (56 HSPs)
chr4 (127-247)||(38416799-38416919)
chr4 (133-247)||(35381043-35381157)
chr4 (131-240)||(25101717-25101826)
chr4 (134-247)||(26169986-26170099)
chr4 (134-247)||(55209723-55209836)
chr4 (145-247)||(12625262-12625364)
chr4 (145-247)||(44232226-44232328)
chr4 (134-247)||(31010214-31010327)
chr4 (132-247)||(7614613-7614728)
chr4 (132-247)||(38716885-38716999)
chr4 (145-247)||(12240327-12240429)
chr4 (145-247)||(25296729-25296831)
chr4 (134-247)||(2760876-2760989)
chr4 (134-247)||(29830343-29830456)
chr4 (134-247)||(54330839-54330952)
chr4 (145-244)||(3036991-3037090)
chr4 (145-247)||(36523117-36523219)
chr4 (145-247)||(43967734-43967836)
chr4 (134-247)||(17610280-17610393)
chr4 (134-247)||(35686373-35686486)
chr4 (130-247)||(47386435-47386552)
chr4 (134-242)||(27407773-27407881)
chr4 (145-244)||(39307707-39307806)
chr4 (145-247)||(2571031-2571133)
chr4 (133-247)||(38721336-38721450)
chr4 (145-247)||(50205754-50205856)
chr4 (145-247)||(27755730-27755836)
chr4 (164-247)||(45291862-45291945)
chr4 (149-247)||(25918218-25918316)
chr4 (163-241)||(55800863-55800941)
chr4 (163-247)||(26125737-26125821)
chr4 (137-247)||(17446782-17446892)
chr4 (150-240)||(56297858-56297948)
chr4 (163-244)||(19595734-19595815)
chr4 (145-221)||(5428589-5428665)
chr4 (163-247)||(50620831-50620915)
chr4 (196-247)||(4467668-4467719)
chr4 (196-247)||(9029598-9029649)
chr4 (145-247)||(20875396-20875498)
chr4 (163-241)||(55191853-55191931)
chr4 (144-232)||(23360188-23360273)
chr4 (165-245)||(29051715-29051793)
chr4 (134-247)||(19433507-19433624)
chr4 (196-247)||(14144606-14144657)
chr4 (194-248)||(6013165-6013218)
chr4 (181-247)||(19903799-19903865)
chr4 (149-247)||(34316536-34316633)
chr4 (145-235)||(34652208-34652298)
chr4 (165-247)||(10550455-10550539)
chr4 (131-247)||(37767107-37767223)
chr4 (166-248)||(5472099-5472181)
chr4 (202-247)||(50181128-50181173)
chr4 (207-244)||(51456506-51456543)
chr4 (127-247)||(54610855-54610976)
chr4 (165-213)||(8435720-8435768)
chr4 (219-247)||(34652165-34652193)
[»] chr2 (32 HSPs)
chr2 (134-245)||(16865054-16865165)
chr2 (133-247)||(19141215-19141329)
chr2 (134-247)||(8042171-8042284)
chr2 (136-247)||(5404998-5405109)
chr2 (145-247)||(7608060-7608162)
chr2 (145-247)||(7799858-7799960)
chr2 (133-247)||(39358145-39358259)
chr2 (145-247)||(44365168-44365270)
chr2 (148-247)||(11841742-11841841)
chr2 (133-247)||(2183106-2183220)
chr2 (145-247)||(6223077-6223179)
chr2 (145-249)||(19262691-19262795)
chr2 (144-247)||(36072184-36072287)
chr2 (145-247)||(11931702-11931804)
chr2 (133-247)||(42133751-42133865)
chr2 (144-247)||(24093685-24093789)
chr2 (144-248)||(43444688-43444792)
chr2 (145-244)||(24251971-24252070)
chr2 (145-234)||(33607387-33607476)
chr2 (159-247)||(36177726-36177815)
chr2 (133-241)||(9006939-9007047)
chr2 (196-247)||(44644932-44644983)
chr2 (197-247)||(38839136-38839186)
chr2 (174-247)||(13125294-13125367)
chr2 (177-246)||(31610803-31610872)
chr2 (196-247)||(9172295-9172346)
chr2 (177-216)||(13598484-13598523)
chr2 (132-247)||(22839076-22839191)
chr2 (196-247)||(32774653-32774704)
chr2 (196-247)||(38292014-38292065)
chr2 (190-244)||(3837271-3837325)
chr2 (198-247)||(31904029-31904078)
[»] chr8 (34 HSPs)
chr8 (133-247)||(616782-616896)
chr8 (133-247)||(623175-623289)
chr8 (133-247)||(42587397-42587511)
chr8 (145-247)||(3100644-3100746)
chr8 (145-247)||(40494395-40494497)
chr8 (134-247)||(41263810-41263923)
chr8 (129-247)||(13216870-13216988)
chr8 (145-247)||(14237291-14237393)
chr8 (145-247)||(18044436-18044538)
chr8 (145-247)||(32998461-32998563)
chr8 (145-247)||(38957181-38957283)
chr8 (145-247)||(2766197-2766299)
chr8 (134-247)||(36642007-36642121)
chr8 (134-247)||(5878317-5878429)
chr8 (165-247)||(5173282-5173364)
chr8 (145-247)||(35403527-35403629)
chr8 (134-247)||(132017-132130)
chr8 (163-237)||(22489433-22489507)
chr8 (134-247)||(8394346-8394459)
chr8 (163-247)||(11637811-11637895)
chr8 (149-244)||(4270244-4270339)
chr8 (163-244)||(6414117-6414198)
chr8 (165-236)||(24524131-24524202)
chr8 (134-245)||(40204873-40204984)
chr8 (149-247)||(3370405-3370503)
chr8 (145-247)||(9632166-9632268)
chr8 (197-247)||(18035163-18035213)
chr8 (153-247)||(18090348-18090441)
chr8 (187-247)||(24729908-24729968)
chr8 (132-240)||(36167074-36167182)
chr8 (207-247)||(40716672-40716712)
chr8 (196-247)||(33700222-33700273)
chr8 (204-247)||(38497142-38497185)
chr8 (129-185)||(13217232-13217288)
[»] chr6 (36 HSPs)
chr6 (133-247)||(17213933-17214047)
chr6 (132-247)||(19088107-19088222)
chr6 (145-247)||(22054783-22054885)
chr6 (133-247)||(32414828-32414942)
chr6 (134-247)||(24624090-24624203)
chr6 (129-245)||(29790201-29790317)
chr6 (133-247)||(4147930-4148044)
chr6 (134-247)||(6563226-6563339)
chr6 (130-247)||(18668837-18668954)
chr6 (145-246)||(20226448-20226549)
chr6 (145-246)||(22120432-22120533)
chr6 (145-247)||(15383079-15383181)
chr6 (164-247)||(1040854-1040937)
chr6 (145-244)||(15337499-15337598)
chr6 (145-247)||(4440861-4440963)
chr6 (145-247)||(17257800-17257902)
chr6 (133-247)||(32671815-32671929)
chr6 (144-245)||(28477763-28477864)
chr6 (165-247)||(3623859-3623940)
chr6 (145-247)||(17155160-17155262)
chr6 (165-247)||(19240741-19240823)
chr6 (145-247)||(31869719-31869821)
chr6 (144-245)||(29693893-29693994)
chr6 (148-247)||(3989413-3989511)
chr6 (192-247)||(12226033-12226088)
chr6 (145-248)||(31569174-31569277)
chr6 (191-248)||(5495306-5495363)
chr6 (144-236)||(21540789-21540881)
chr6 (163-247)||(24955545-24955629)
chr6 (178-244)||(2360034-2360100)
chr6 (198-247)||(8101664-8101713)
chr6 (134-227)||(25475977-25476070)
chr6 (196-248)||(1260492-1260544)
chr6 (196-244)||(10298725-10298773)
chr6 (196-247)||(23158058-23158109)
chr6 (150-247)||(20437162-20437260)
[»] chr3 (36 HSPs)
chr3 (145-247)||(21797567-21797669)
chr3 (133-247)||(42490345-42490459)
chr3 (134-247)||(13499484-13499597)
chr3 (133-247)||(27010623-27010737)
chr3 (133-247)||(39866290-39866404)
chr3 (134-247)||(42761632-42761745)
chr3 (145-247)||(27334880-27334982)
chr3 (133-247)||(33415798-33415912)
chr3 (172-247)||(30213842-30213917)
chr3 (133-247)||(20765195-20765309)
chr3 (145-247)||(44561795-44561897)
chr3 (145-247)||(54507652-54507754)
chr3 (164-247)||(38137854-38137937)
chr3 (145-247)||(34912291-34912393)
chr3 (130-247)||(21005289-21005406)
chr3 (139-247)||(33803526-33803635)
chr3 (180-247)||(52167255-52167322)
chr3 (145-247)||(6910345-6910447)
chr3 (134-227)||(19823900-19823993)
chr3 (134-247)||(48334670-48334782)
chr3 (163-247)||(36227574-36227658)
chr3 (145-247)||(41252912-41253014)
chr3 (203-247)||(44856415-44856459)
chr3 (177-244)||(3430426-3430493)
chr3 (196-247)||(15332955-15333006)
chr3 (180-247)||(25527450-25527517)
chr3 (192-247)||(33128068-33128123)
chr3 (177-247)||(43181504-43181575)
chr3 (145-247)||(43467891-43467993)
chr3 (192-239)||(27813445-27813492)
chr3 (195-245)||(3017852-3017902)
chr3 (198-247)||(17643795-17643844)
chr3 (190-246)||(23224306-23224363)
chr3 (182-247)||(23940511-23940576)
chr3 (191-247)||(15568084-15568140)
chr3 (196-240)||(41751566-41751610)
[»] scaffold0056 (1 HSPs)
scaffold0056 (134-247)||(70961-71073)
[»] scaffold0018 (1 HSPs)
scaffold0018 (145-247)||(67918-68020)
[»] scaffold0003 (1 HSPs)
scaffold0003 (133-247)||(161986-162100)
[»] scaffold0022 (1 HSPs)
scaffold0022 (130-247)||(100796-100913)
[»] scaffold0295 (1 HSPs)
scaffold0295 (133-247)||(13866-13980)
[»] scaffold0262 (1 HSPs)
scaffold0262 (145-247)||(22791-22893)
[»] scaffold0225 (1 HSPs)
scaffold0225 (145-247)||(8982-9084)
[»] scaffold0029 (1 HSPs)
scaffold0029 (145-247)||(138179-138281)
[»] scaffold0595 (1 HSPs)
scaffold0595 (196-248)||(4010-4062)
[»] scaffold0099 (1 HSPs)
scaffold0099 (196-247)||(28801-28852)
[»] scaffold0608 (1 HSPs)
scaffold0608 (202-247)||(1588-1633)


Alignment Details
Target: chr5 (Bit Score: 151; Significance: 6e-80; HSPs: 39)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 38 - 244
Target Start/End: Original strand, 39776539 - 39776740
Alignment:
Q  38 ttgtactctttacacgtattgcatttatattactctattaaataaggtacacttaaaaaggaagtttacaaaaatatttgagaacttactgaaatatact 137  Q
    ||||||||||||||| ||||||||||||||||     |||||||||||||||| ||||||||| |||||||||||||||||||||||| |||||||||||    
T  39776539 ttgtactctttacacatattgcatttatatta-----ttaaataaggtacactgaaaaaggaattttacaaaaatatttgagaacttagtgaaatatact 39776633  T
Q  138 ccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattag 237  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| || | ||||||||||| ||||||||||||||||||||||||||||||||||    
T  39776634 ccctcgatttcaaaatacatttcgtatttttgcaatgtacactattcacataacttattttgaccgtactttttaactaacatataaatacaaatattag 39776733  T
Q  238 catgtaa 244  Q
    |||||||    
T  39776734 catgtaa 39776740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 30355136 - 30355023
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||| ||||||||||||| ||  ||||||||||||| |||||||||  ||||||| ||| ||||||| |||||||||| ||||||||||||||    
T  30355136 atactccctcg-tttcaaaatacatgtccaatttttgcaatatgcactattcacttgatttactttaaccatacattttaactaatatataaatacaaat 30355038  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  30355037 attagcatgtaagat 30355023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 38916513 - 38916399
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||| ||||||||| ||| ||||||||| |||| ||  |||||||||||||||||||||||||||||||||||||    
T  38916513 atactccctccgtttcaaaatacatgtcgcatttttgcagtatgcactattcacatgacttgctttgaccatactttttaactaacatataaatacaaat 38916414  T
Q  233 attagcatgtaagat 247  Q
     ||||||||| ||||    
T  38916413 gttagcatgtgagat 38916399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 978077 - 978190
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  978077 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 978176  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  978177 ttagcatgtaagat 978190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 33387219 - 33387333
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||| |||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||||||| ||||||||||||||    
T  33387219 atactccctccattttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 33387318  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  33387319 attagcatgtaagat 33387333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 9502889 - 9502776
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||| ||||||||| |   ||||||||||| | |||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  9502889 tactccctccgttttaaaatacatgtttaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 9502790  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  9502789 ttagcatgtaagat 9502776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 8086293 - 8086179
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||||||| ||||||||||||||    
T  8086293 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 8086194  T
Q  233 attagcatgtaagat 247  Q
    |||| ||||||||||    
T  8086193 attaacatgtaagat 8086179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 14634408 - 14634306
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | ||||| |||  ||| ||| |||||| ||||||||||||||| ||||||||||||||||||||||||||    
T  14634408 tttcaaaatacatgtccaatttttgcaatgtgcactagtcacttgacttactttgactatactttttaactaatatataaatacaaatattagcatgtaa 14634309  T
Q  245 gat 247  Q
    |||    
T  14634308 gat 14634306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 165 - 243
Target Start/End: Original strand, 11251145 - 11251223
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 243  Q
    ||||||||| | |||||||||  ||| ||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  11251145 ttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgta 11251223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 33587720 - 33587618
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | || ||||||| ||| ||| |||||||||| |||||||||||  ||||||||||||||||| |||||||    
T  33587720 tttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttgaccatattttttaactaatctataaatacaaatattaacatgtaa 33587621  T
Q  245 gat 247  Q
    |||    
T  33587620 gat 33587618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 24992400 - 24992287
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| || || |||| |||| | ||||||||| ||   ||| |||||||||| |||||||||||  ||||||||||||||    
T  24992400 tactccctccgtttcaaaatacatgtcatagttttacaatgtgcactattcacatagcttactttgaccatattttttaactaatttataaatacaaata 24992301  T
Q  234 ttagcatgtaagat 247  Q
    ||||||| ||||||    
T  24992300 ttagcatataagat 24992287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 40156198 - 40156311
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  | ||||||||| | |||||||||  ||| ||| ||| |||||| ||||||| |||  ||||||||||||||    
T  40156198 tactccctccgtttcaaaatacatatccaacttttgcaatgtgcactattcacttgacttacttttaccataatttttaattaatgtataaatacaaata 40156297  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  40156298 ttagcatgtaagat 40156311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 3472528 - 3472426
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   ||||||||||| | ||||||| |  ||| ||| |||||||||| |||||||||||   ||||||||||||||||||||||||    
T  3472528 tttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatattttttaactaatgaataaatacaaatattagcatgtaa 3472429  T
Q  245 gat 247  Q
    |||    
T  3472428 gat 3472426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 243
Target Start/End: Original strand, 13812062 - 13812156
Alignment:
Q  149 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 243  Q
    ||||||||| |||||||||| ||||||  | |||||| || ||||||||| | |||| ||||||||||| |||| |||||||||||||| |||||    
T  13812062 aaaatacatatcgtatttttacaatatgtattattcacataatttattttaatcatattttttaactaatatatcaatacaaatattagtatgta 13812156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 131 - 248
Target Start/End: Original strand, 34111959 - 34112076
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    |||||||| |||  ||||||||||||| ||   |||||||||| | |||||||||  ||| ||| |||||| ||| ||||| |||||  |||||||||||    
T  34111959 atatactctctccgtttcaaaatacatgtctagtttttgcaatgtgcactattcacttgacttactttgactatatttttttactaatctataaatacaa 34112058  T
Q  231 atattagcatgtaagatt 248  Q
    |||||| |||||||||||    
T  34112059 atattatcatgtaagatt 34112076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 18094346 - 18094230
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    ||||||||||||  ||||||||||||| |   ||||||||||| | || ||||||  | | ||| ||| |  |||||||||||||||  |||||||||||    
T  18094346 atatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcattattcacttaacttactttaattatactttttaactaatgtataaatacaa 18094247  T
Q  231 atattagcatgtaagat 247  Q
    |||||||||||||||||    
T  18094246 atattagcatgtaagat 18094230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 11761128 - 11761179
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| ||||||||||| |||||||||||||||||| ||||||||||    
T  11761128 tttgaccatattttttaactaatatataaatacaaatattaacatgtaagat 11761179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 134 - 244
Target Start/End: Complemental strand, 12007894 - 12007784
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||| ||||||  | | | ||||||| | |||| ||| ||||||| |||||||||| ||| ||||||||||||||     
T  12007894 tactccctccgtttcaaaatacatgtcgcatttttatattgtgcactatttacatgacttaatttgaccctactttttaattaatatataaatacaaatg 12007795  T
Q  234 ttagcatgtaa 244  Q
     ||||||||||    
T  12007794 ctagcatgtaa 12007784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 178 - 232
Target Start/End: Original strand, 35825006 - 35825060
Alignment:
Q  178 actattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||| |||||||||||||||| |||||||| || ||||||||||||||    
T  35825006 actattcatataatttattttgaccataatttttaaccaatatataaatacaaat 35825060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 196 - 244
Target Start/End: Original strand, 7224227 - 7224275
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||||||| |||||||  |||||||||||||||||||||||||    
T  7224227 tttgaccatactttctaactaatttataaatacaaatattagcatgtaa 7224275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 11785978 - 11785874
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac-aaatattagcatgt 242  Q
    |||||||||||||| |   ||||||||||| |  ||||||||  ||| ||| ||||| ||||||||||||||||  ||||||||| |||||||| |||||    
T  11785978 atttcaaaatacatgtttaatttttgcaatgtgtactattcacttgacttactttgatcatactttttaactaatgtataaatacaaaatattaccatgt 11785879  T
Q  243 aagat 247  Q
    |||||    
T  11785878 aagat 11785874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 32400400 - 32400440
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |||||||||||||||||||||||||||||    
T  32400400 tttttaactaatatataaatacaaatattagcatgtaagat 32400440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 204 - 247
Target Start/End: Complemental strand, 9050768 - 9050725
Alignment:
Q  204 tactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||||||  ||||||||||||||||||||||||||||    
T  9050768 tactttttaactaatgtataaatacaaatattagcatgtaagat 9050725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 32017275 - 32017326
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| |||| ||||||||||| |||||||||||||| ||||||||||||||    
T  32017275 tttgatcatattttttaactaatatataaatacaaatgttagcatgtaagat 32017326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 145 - 236
Target Start/End: Original strand, 37495621 - 37495712
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatta 236  Q
    ||||||||||||||| ||| ||||  ||||| ||||||||  ||   ||| ||||| |||| ||||||||||| ||||||||||||||||||    
T  37495621 tttcaaaatacattttgtaattttataatatgcactattctcatatcttactttgatcatattttttaactaatatataaatacaaatatta 37495712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 193 - 246
Target Start/End: Complemental strand, 20692592 - 20692541
Alignment:
Q  193 tattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 246  Q
    |||||||||||||||||||||| ||  ||||||||||||||||| |||||||||    
T  20692592 tattttgaccatactttttaaccaa--tataaatacaaatattaacatgtaaga 20692541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 25330234 - 25330325
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaac-atataaatacaaatattag 237  Q
    ||||||||||||||||| |||||| | ||||| | ||||||||| ||||||||||||  || ||||||| || | |||||||||||||||||||    
T  25330234 tttcaaaatacatttcgcatttttactatataaattattcatataatttattttgacttta-tttttaa-tatctatataaatacaaatattag 25330325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 3422399 - 3422359
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  3422399 tttttaactaatatataaatacaaatgttagcatgtaagat 3422359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 191 - 247
Target Start/End: Original strand, 18998744 - 18998800
Alignment:
Q  191 tttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| ||| |||||| ||||||||||| |||||||||||||| |||| |||||||||    
T  18998744 tttactttaaccatattttttaactaatatataaatacaaatgttagtatgtaagat 18998800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 27579619 - 27579579
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  27579619 tttttaactaatatataaatacaaatgttagcatgtaagat 27579579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 131 - 210
Target Start/End: Original strand, 18598541 - 18598620
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttt 210  Q
    ||||||||| ||  ||||||||||||| ||| ||||||||||| | || |||| | |||| ||| |||||||||||||||    
T  18598541 atatactccatctgtttcaaaatacatgtcgcatttttgcaatgtgcattattgacatgaattactttgaccatactttt 18598620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 26387079 - 26387028
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| |||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  26387079 tttgatcatattttttaactaacatataaatataaatgttagcatttaagat 26387028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 131 - 232
Target Start/End: Complemental strand, 5947816 - 5947715
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    ||||| ||| || |||| ||||||||| ||  |||||  | ||||||| |||||| || | ||| |||||| ||| |||||| |||||||||||||||||    
T  5947816 atataatccatccattttaaaatacatgtcacattttcacgatatacattattcacataacttactttgacaatattttttagctaacatataaatacaa 5947717  T
Q  231 at 232  Q
    ||    
T  5947716 at 5947715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 170 - 247
Target Start/End: Complemental strand, 40268020 - 40267944
Alignment:
Q  170 caatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| ||||||| | ||  ||||||||||||||| ||||||| ||| | ||| |||||||| ||||||||||||||    
T  40268020 caatatgcactatttacatagtttattttgaccata-tttttaattaatacatagatacaaatgttagcatgtaagat 40267944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 144 - 216
Target Start/End: Complemental strand, 7750138 - 7750066
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaacta 216  Q
    |||| ||||||||  ||||| |||| |||| | |||||||||||| |||||||||||  ||| ||||||||||    
T  7750138 attttaaaatacacgtcgtaattttacaatgtgcactattcatataatttattttgattatattttttaacta 7750066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 12360010 - 12359970
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |||||||||||||| |||||||| |||||    
T  12360010 tttttaactaatatataaatacaaatgttagcatgaaagat 12359970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 12447616 - 12447567
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||||||||||||||  | |||||||  |||||||||||||||||    
T  12447616 tttgaccatactttttaactaatgtttaaatac--atattagcatgtaagat 12447567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 24916435 - 24916395
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||  ||||||||||||||||||||| ||||||    
T  24916435 tttttaactaatttataaatacaaatattagcatataagat 24916395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 27109757 - 27109801
Alignment:
Q  203 atactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |||  || |||||||||||||||||||||||||    
T  27109757 atactttttaattaatgtaaaaatacaaatattagcatgtaagat 27109801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 75; Significance: 1e-34; HSPs: 36)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 11641334 - 11641216
Alignment:
Q  129 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 228  Q
    |||||||||||||| |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||    
T  11641334 aaatatactccctccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatac 11641235  T
Q  229 aaatattagcatgtaagat 247  Q
    |||||||||||||||||||    
T  11641234 aaatattagcatgtaagat 11641216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 6402673 - 6402559
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| |||||||||||||||||||||||||| ||||||||||||||    
T  6402673 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaat 6402574  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  6402573 attagcatgtaagat 6402559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 36757750 - 36757635
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||| || |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||    
T  36757750 tatactccatccatttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaa 36757651  T
Q  232 tattagcatgtaagat 247  Q
    ||||||||||||||||    
T  36757650 tattagcatgtaagat 36757635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 6766369 - 6766485
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    ||||||||||||  ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||    
T  6766369 atatactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaa 6766468  T
Q  231 atattagcatgtaagat 247  Q
    |||||||||||||||||    
T  6766469 atattagcatgtaagat 6766485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 40772037 - 40771921
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    ||||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||||||| ||||||||||||||||||||||  |||||||||||    
T  40772037 atatactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaa 40771938  T
Q  231 atattagcatgtaagat 247  Q
    |||||||||||||||||    
T  40771937 atattagcatgtaagat 40771921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 28030932 - 28030830
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| | | ||||||||||| | || |||| | |||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  28030932 tttcaaaatacatgttgcatttttgcaatgtgcattatttacatgacttattttgaccatactttttaactaacatataaatacaaatgttagcatgtaa 28030833  T
Q  245 gat 247  Q
    |||    
T  28030832 gat 28030830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 16120707 - 16120589
Alignment:
Q  129 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 228  Q
    |||| |||||||||  ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  |||||||||    
T  16120707 aaatttactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatac 16120608  T
Q  229 aaatattagcatgtaagat 247  Q
    |||||||||||||||||||    
T  16120607 aaatattagcatgtaagat 16120589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 27292637 - 27292753
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    |||| |||||||  |||||||||| || ||  ||||||||||| | |||||||||  ||||||| |||||| |||||||||||||||  |||||||||||    
T  27292637 atatgctccctccgtttcaaaatatatgtccaatttttgcaatctgcactattcacttgatttactttgactatactttttaactaaagtataaatacaa 27292736  T
Q  231 atattagcatgtaagat 247  Q
    |||||||||||||||||    
T  27292737 atattagcatgtaagat 27292753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 30003531 - 30003646
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||| ||  ||||||||||||| ||  ||||||| ||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||    
T  30003531 tatactccatccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaa 30003630  T
Q  232 tattagcatgtaagat 247  Q
    ||||||||||||||||    
T  30003631 tattagcatgtaagat 30003646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 17305953 - 17306067
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||| ||| ||||||||||||||    
T  17305953 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaattaatatataaatacaaat 17306052  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  17306053 attagcatgtaagat 17306067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 24321257 - 24321374
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgacc--atactttttaactaacatataaataca 229  Q
    |||||||||||  ||| ||||||||| ||| ||||||||||| | |||||||||  ||||||| |||||||  ||| |||||||||||  ||||||||||    
T  24321257 tatactccctccgttttaaaatacatgtcgaatttttgcaatgtgcactattcacttgatttactttgaccatataatttttaactaatgtataaataca 24321356  T
Q  230 aatattagcatgtaagat 247  Q
    ||||||||||||||||||    
T  24321357 aatattagcatgtaagat 24321374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 42788805 - 42788691
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||| ||||||||||| || ||  ||||||| ||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  42788805 atactccctccatttcaaaatatatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 42788706  T
Q  233 attagcatgtaagat 247  Q
    ||| |||||||||||    
T  42788705 atttgcatgtaagat 42788691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 38153529 - 38153426
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 243  Q
    |||||||||||||| ||| ||||||  ||| | ||||||||| |||| ||| | | ||||||||||||||||||||||||||||||||| ||| ||||||    
T  38153529 atttcaaaatacatgtcgcatttttataatgtgcactattcacatgacttactgttaccatactttttaactaacatataaatacaaatgttatcatgta 38153430  T
Q  244 agat 247  Q
    ||||    
T  38153429 agat 38153426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 30701717 - 30701831
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||| ||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||    
T  30701717 atactccctccgtttcaaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaatacaaat 30701816  T
Q  233 attagcatgtaagat 247  Q
    |||||| ||||||||    
T  30701817 attagcgtgtaagat 30701831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 44647976 - 44647862
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||| |||| ||||||||| ||| |||||| |||| |  | |||||| |||| ||||||||| |||| |||||||| || ||||||||||||||    
T  44647976 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 44647877  T
Q  233 attagcatgtaagat 247  Q
     ||||||||||||||    
T  44647876 gttagcatgtaagat 44647862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 131 - 247
Target Start/End: Original strand, 26910073 - 26910189
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    ||||| |||||| |||| ||||||||| |   ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||    
T  26910073 atatattccctccattttaaaatacatgtataatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaa 26910172  T
Q  231 atattagcatgtaagat 247  Q
    |||||| |||| |||||    
T  26910173 atattaacatgcaagat 26910189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 40977736 - 40977637
Alignment:
Q  148 caaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| ||  ||||||||||| |  ||||||||  ||| | | ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  40977736 caaaatacatgtccaatttttgcaatgtgtactattcacttgactaactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 40977637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 36399109 - 36399211
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  | | ||| |||||||||| |||||||||||  ||||||||||||||||||| |||||    
T  36399109 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaatattagcgtgtaa 36399208  T
Q  245 gat 247  Q
    |||    
T  36399209 gat 36399211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 42735419 - 42735314
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt---aactaacatataaatacaaatattagcatg 241  Q
    ||||||||||||| |   ||| ||||||| | |||||||||  ||| ||| ||||||||||||||||   |||||| |||||||||||||||||||||||    
T  42735419 tttcaaaatacatgttcaattattgcaatgtgcactattcacttgacttactttgaccatacttttttttaactaatatataaatacaaatattagcatg 42735320  T
Q  242 taagat 247  Q
    ||||||    
T  42735319 taagat 42735314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 163 - 246
Target Start/End: Original strand, 48375031 - 48375114
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 246  Q
    ||||||||||| |||| ||||||  | | ||||||||| |||| |||||||||||  |||||||||||||||||||||||||||    
T  48375031 atttttgcaatgtacattattcacttaacttattttgatcatattttttaactaatttataaatacaaatattagcatgtaaga 48375114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 52024025 - 52024139
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| |   ||||||||||| | |||||||||  | | ||| |||||||||| |||||||||||  |||||||| ||||    
T  52024025 atactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatataaat 52024124  T
Q  233 attagcatgtaagat 247  Q
    |||||| ||||||||    
T  52024125 attagcgtgtaagat 52024139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 30385407 - 30385294
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||| || |||| ||||||||| ||| | ||||  ||| | ||||||||| ||  |||| |||||||||| ||||||||||| ||||||||||||||     
T  30385407 tactccatctattttaaaatacatgtcgcaattttataatgtgcactattcacatagtttactttgaccatattttttaactaatatataaatacaaatg 30385308  T
Q  234 ttagcatgtaagat 247  Q
    |||| |||||||||    
T  30385307 ttagtatgtaagat 30385294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 149 - 245
Target Start/End: Complemental strand, 3485454 - 3485358
Alignment:
Q  149 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaag 245  Q
    ||||||||| ||||| |||| |||||| ||||||||  || | ||| ||||| |||| ||||||||||| |||||||||||||| ||| ||||||||    
T  3485454 aaaatacatgtcgtaattttacaatatgcactattcgcataacttactttgatcatattttttaactaatatataaatacaaatgttatcatgtaag 3485358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 44644618 - 44644510
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||| |||| ||||||||| ||| |||||| |||| |  | |||||| |||| ||| ||||| |||| |||||||| || ||||||||||||||    
T  44644618 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttactttgatcatattttttaacaaatatataaatacaaat 44644519  T
Q  233 attagcatg 241  Q
     ||||||||    
T  44644518 gttagcatg 44644510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 9342896 - 9342794
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||| |||| ||  ||||||||||| | |  ||||||  ||| ||| ||||| |||| |||||||||||  |||||||||||||||||||||||||    
T  9342896 tttcaaaaaacatgtctaatttttgcaatgtgcgttattcacttgacttactttgatcatattttttaactaatgtataaatacaaatattagcatgtaa 9342797  T
Q  245 gat 247  Q
    |||    
T  9342796 gat 9342794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 15382677 - 15382575
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||| | |||| |||| ||||||||||| || | ||| | ||||||   ||||||| ||| ||||||||||||||||||| ||||||    
T  15382677 tttcaaaatacatgtcgcaattttacaatgtacactattcacataacttactctgaccaatttttttaaataatatataaatacaaatattagtatgtaa 15382578  T
Q  245 gat 247  Q
    |||    
T  15382577 gat 15382575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 147 - 247
Target Start/End: Complemental strand, 15912585 - 15912485
Alignment:
Q  147 tcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 246  Q
    ||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||| | | |  | |||||||||||||||||||||||||    
T  15912585 tcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatacttttttatttatttttaaatacaaatattagcatgtaaga 15912486  T
Q  247 t 247  Q
    |    
T  15912485 t 15912485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 202 - 247
Target Start/End: Complemental strand, 22575781 - 22575736
Alignment:
Q  202 catactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| ||||||||||| |||||||||||||| ||||||||||||||    
T  22575781 catattttttaactaatatataaatacaaatgttagcatgtaagat 22575736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 4302147 - 4302231
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| ||||||||| |  ||| ||| |||||  ||  |||||||||||  |||||||| |||||||||||||||||||    
T  4302147 atttttgcaatgtacactatttacttgacttactttgataatgttttttaactaatgtataaatataaatattagcatgtaagat 4302231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 32898572 - 32898623
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| |||||||  |||||||||||| ||||||||| |||||||||    
T  32898572 tttgaccataatttttaagcaacatataaatataaatattagtatgtaagat 32898623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 19711952 - 19711841
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||||||  ||||||||||||| ||| ||||||||||  | ||||||| |  ||| ||    | || ||| ||||||||||||||||||||||||     
T  19711952 tatactccctctgtttcaaaatacatatcgcatttttgcaacgtgcactatttacgtgactt----taactatattttttaactaacatataaatacaag 19711857  T
Q  232 tattagcatgtaagat 247  Q
    |  |||||||||||||    
T  19711856 tgatagcatgtaagat 19711841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 31444986 - 31445036
Alignment:
Q  197 ttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| ||||||||||| ||||||| |||||| || |||||||||||    
T  31444986 ttgaccatattttttaactaatatataaacacaaatgtttgcatgtaagat 31445036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 246
Target Start/End: Original strand, 34634965 - 34635019
Alignment:
Q  192 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 246  Q
    |||||||||  ||| ||||||||||| |||||||||||||| ||| |||||||||    
T  34634965 ttattttgataatattttttaactaatatataaatacaaatgttaacatgtaaga 34635019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 40800649 - 40800536
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaat 232  Q
    ||||| ||| ||||||||||| || ||||| |||| |||| | || || ||| || | ||| |||||||||| ||||| |||||| |||||| |||||||    
T  40800649 tactctctccatttcaaaatatatgtcgtaattttacaatgtgcattaatcacataacttactttgaccatatttttttaactaatatataa-tacaaat 40800551  T
Q  233 attagcatgtaagat 247  Q
     ||||||||||||||    
T  40800550 gttagcatgtaagat 40800536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 179 - 247
Target Start/End: Complemental strand, 42367513 - 42367445
Alignment:
Q  179 ctattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||  ||| ||| ||||| |||| |||||||||||  |||||||||||||| || ||||||||||    
T  42367513 ctattcacttgacttactttgatcataatttttaactaatgtataaatacaaatactaacatgtaagat 42367445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 145 - 244
Target Start/End: Complemental strand, 48526935 - 48526836
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaaca-tataaatacaaatattagcatgta 243  Q
    |||||||||| || | | ||||||||||| |||| |||| | |||||||| |||||||||| ||||||| ||| | |||||||| |||| |||| |||||    
T  48526935 tttcaaaatagatattgcatttttgcaatgtacattatttacatgatttactttgaccata-tttttaattaatattataaatataaatgttagtatgta 48526837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 52)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 42890594 - 42890492
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||| ||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||    
T  42890594 tttcaaaatacatgtccaatttttgcaatgtgcactattcatttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaa 42890495  T
Q  245 gat 247  Q
    |||    
T  42890494 gat 42890492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 28061778 - 28061664
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  28061778 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 28061679  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  28061678 attagcatgtaagat 28061664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 36623308 - 36623421
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  36623308 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 36623407  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  36623408 ttagcatgtaagat 36623421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 47156027 - 47156140
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  47156027 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 47156126  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  47156127 ttagcatgtaagat 47156140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 7438914 - 7439016
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||||| || ||||||  ||| ||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7438914 tttcaaaatacatgtctaatttttgcaatatgcattattcacttgacttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 7439013  T
Q  245 gat 247  Q
    |||    
T  7439014 gat 7439016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 38852110 - 38851996
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  38852110 atactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 38852011  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  38852010 attagcatgtaagat 38851996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 41897987 - 41898101
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||| |||||||||||||||| ||||||||||||||    
T  41897987 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaat 41898086  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  41898087 attagcatgtaagat 41898101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 48602436 - 48602549
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  |||||||||||||  |  |||||| |||| | |||||||||| ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  48602436 tactccctccgtttcaaaatacatgcccaatttttccaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaata 48602535  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  48602536 ttagcatgtaagat 48602549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 177 - 244
Target Start/End: Original strand, 26161639 - 26161706
Alignment:
Q  177 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||| |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||    
T  26161639 cactattcacatgatttattttgaccatgctttttaactaatatataaatacaaatattagcatgtaa 26161706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 36341631 - 36341733
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||| ||||||||||| | ||||||||| |||| ||| ||| || ||||||||||||||||||||||||| |||| |||| ||||||    
T  36341631 tttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttaatttaacgatactttttaactaacatataaatataaatgttagaatgtaa 36341730  T
Q  245 gat 247  Q
    |||    
T  36341731 gat 36341733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 36585120 - 36585222
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||||||| ||||||||||| ||||||  |||||||||||||||||||||||||    
T  36585120 tttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttatttttaccatacttttaaactaatgtataaatacaaatattagcatgtaa 36585219  T
Q  245 gat 247  Q
    |||    
T  36585220 gat 36585222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 40256068 - 40256170
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | | |||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  40256068 tttcaaaatacatgtccaatttttgcaatgtgctctattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 40256167  T
Q  245 gat 247  Q
    |||    
T  40256168 gat 40256170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 40090180 - 40090067
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||| |||||| || ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  40090180 tactccctccgttttaaaatatatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 40090081  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  40090080 ttagcatgtaagat 40090067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 16778504 - 16778618
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  | ||||||||| | |||||||||  ||  ||| |||||||||| |||||||||||  |||||||||||||    
T  16778504 atactccctccgtttcaaaatacatgtccaacttttgcaatgtgcactattcacttggcttactttgaccataatttttaactaatgtataaatacaaat 16778603  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  16778604 attagcatgtaagat 16778618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 20885103 - 20885216
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  |||||| |||| |  ||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||    
T  20885103 tactccctccgtttcaaaatacatgtccaatttttacaatgtggactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 20885202  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  20885203 ttagcatgtaagat 20885216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 32431620 - 32431507
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  |||||||||| || ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||    
T  32431620 tactccctccgtttcaaaatatatgtcaaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaata 32431521  T
Q  234 ttagcatgtaagat 247  Q
    |||| |||||||||    
T  32431520 ttagtatgtaagat 32431507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 41088587 - 41088700
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    ||||||||| |||||||||||||| ||  | |||| |||||| |||| ||||| ||| ||| |||||||||| |||||||||||  ||||||| ||||||    
T  41088587 tactccctccatttcaaaatacatgtccaaattttacaatatgcactgttcatctgacttactttgaccatattttttaactaatgtataaatgcaaata 41088686  T
Q  234 ttagcatgtaagat 247  Q
    ||| ||||||||||    
T  41088687 ttaacatgtaagat 41088700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 44732041 - 44732125
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| | |||||||||  ||| ||| ||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  44732041 atttttgcaatgtgcactattcacttgacttactttgatcatactttttaactaatgtataaatacaaatattagcatgtaagat 44732125  T

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Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 46103570 - 46103519
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46103570 tttgaccatactttttaactaatatataaatacaaatattagcatgtaagat 46103519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 6766813 - 6766699
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||| | |||| |||| | || |||||| || | |||||||||||||| |||||||||||  ||||||| |||||    
T  6766813 atactccctccgtttcaaaatacatgtcgcaattttacaatctgcattattcacataacttattttgaccatattttttaactaatgtataaatgcaaat 6766714  T
Q  233 attagcatgtaagat 247  Q
     ||||||||||||||    
T  6766713 gttagcatgtaagat 6766699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 7457972 - 7457871
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  | ||||||||| | |||||||||  | | ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  7457972 tttcaaaatacatgtctaagttttgcaatgtgcactattcactt-acttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 7457874  T
Q  245 gat 247  Q
    |||    
T  7457873 gat 7457871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 27045659 - 27045557
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| | | | |||| |||| || |||||||| ||| |||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||    
T  27045659 tttcaaaatacatgttgcaattttacaatgtatactattcacatggtttactttgaccatattttttaactaatatataaatacaaatgttagcatataa 27045560  T
Q  245 gat 247  Q
    |||    
T  27045559 gat 27045557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 178 - 247
Target Start/End: Original strand, 2198646 - 2198715
Alignment:
Q  178 actattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| ||||||||||||| ||||||||||||||||  ||||||||||||||||| || |||||||    
T  2198646 actattcatctgatttattttgaacatactttttaactaatgtataaatacaaatattaacaagtaagat 2198715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 145 - 237
Target Start/End: Original strand, 3785531 - 3785623
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattag 237  Q
    ||||||||||||| || || |||  |||||| ||||||||||||  |||| |||||||||| ||||||||||| |||||||||||||| ||||    
T  3785531 tttcaaaatacatatcataatttcacaatatgcactattcatatagtttactttgaccatattttttaactaatatataaatacaaatgttag 3785623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 30342103 - 30342187
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| | || ||||||  ||||||| |||||| |||||||||||||||  |||||||||||||||||| |||||||||    
T  30342103 atttttgcaatgtgcattattcacttgatttactttgactatactttttaactaatgtataaatacaaatattagtatgtaagat 30342187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 35117155 - 35117238
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||||| |||||||||  ||| ||| ||||||||||| ||||||||||  |||||||| |||||||||||||||||||    
T  35117155 atttttgcaatatgcactattcacttgacttactttgaccatac-ttttaactaatgtataaatataaatattagcatgtaagat 35117238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 39130159 - 39130075
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| | |||||||||  ||| ||  |||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  39130159 atttttgcaatgtgcactattcacttgactttctttgaccatattttttaactaatgtataaatacaaatattagcatgtaagat 39130075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 134 - 234
Target Start/End: Complemental strand, 46322227 - 46322127
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    ||||||||| |||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  ||| ||||||||||    
T  46322227 tactccctccatttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtatcaatacaaata 46322128  T
Q  234 t 234  Q
    |    
T  46322127 t 46322127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 6174847 - 6174949
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||| || ||  ||||||||||  | |||||||||| ||| ||| | |||||||| |||||||||||  |||||||||||| ||||||||||||    
T  6174847 tttcaaaatatatgtccaatttttgcaaggtgcactattcatttgacttactgtgaccatattttttaactaatgtataaatacaaacattagcatgtaa 6174946  T
Q  245 gat 247  Q
    |||    
T  6174947 gat 6174949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 7169137 - 7169239
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| || || ||||||||| |    |||||| |||||||| |||||| ||| ||||||||||| |||||||||||||||||| ||| |||    
T  7169137 tttcaaaatacatgtcataattttgcaatgtgtcatattcacatgatttactttgactatattttttaactaatatataaatacaaatattaacatataa 7169236  T
Q  245 gat 247  Q
    |||    
T  7169237 gat 7169239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 149 - 239
Target Start/End: Original strand, 8683833 - 8683923
Alignment:
Q  149 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagca 239  Q
    ||||||||| ||  ||||||| ||| | || ||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||||||||    
T  8683833 aaaatacatgtccaatttttgaaatgtgcattattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagca 8683923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 42877386 - 42877499
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  | ||||| ||| | ||||||| || | | ||| ||||||||||||||||||||||  |||||||| |||||    
T  42877386 tactccctccgtttcaaaatacatgtccaaattttgtaatgtgcactattaatttaacttactttgaccatactttttaactaatgtataaataaaaata 42877485  T
Q  234 ttagcatgtaagat 247  Q
    |||| |||||||||    
T  42877486 ttagaatgtaagat 42877499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 11502780 - 11502729
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| ||||||||||||||||  ||||||||||||||||||||||||||||    
T  11502780 tttgatcatactttttaactaatgtataaatacaaatattagcatgtaagat 11502729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 4131754 - 4131652
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||| || ||| | |||| |||| || |||||||| || | ||| ||| |||||| ||||||||||| |||||||||||||  |||||||||||    
T  4131754 tttcaaaatatatgtcgcaattttacaatgtatactattcacataacttactttaaccatattttttaactaatatataaatacaaaagttagcatgtaa 4131655  T
Q  245 gat 247  Q
    |||    
T  4131654 gat 4131652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 25566798 - 25566697
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||| |||||||  ||| ||||||||||||||||||| |    
T  25566798 tttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttctaactaatgtat-aatacaaatattagcatgtga 25566700  T
Q  245 gat 247  Q
    |||    
T  25566699 gat 25566697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 46479840 - 46479942
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   |||||| |||| | ||||||||   ||| ||| |||||||| | |||||||||||  |||||||||||||||||||||||||    
T  46479840 tttcaaaatacatgtttaatttttacaatgtgcactattcgcttgacttactttgaccaaaatttttaactaatgtataaatacaaatattagcatgtaa 46479939  T
Q  245 gat 247  Q
    |||    
T  46479940 gat 46479942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 5529022 - 5529124
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| || || |||| |||| ||||||||| |  |   |||||||||| ||| ||||||||||| ||| ||||| |||| |||||||||||    
T  5529022 tttcaaaatacatgtcctaattttacaatgtacactatttacgtagattattttgactatattttttaactaatatacaaataaaaatgttagcatgtaa 5529121  T
Q  245 gat 247  Q
    |||    
T  5529122 gat 5529124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 134 - 214
Target Start/End: Original strand, 45331915 - 45331992
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaac 214  Q
    |||||||||  |||||||| ||||   ||||||||||||||| || ||||||||||| ||| |||||||||| ||||||||    
T  45331915 tactccctccgtttcaaaacacat---gtatttttgcaatatgcattattcatatgacttactttgaccatattttttaac 45331992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 49102044 - 49101962
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| |||||| |||||||||||| | |||||||   |||| ||||||||||| | |||||||||||| || |||||||||||    
T  49102044 ttttacaatatgcactattcatataacttatttttgtcatattttttaactaatacataaatacaaatttttgcatgtaagat 49101962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 232
Target Start/End: Complemental strand, 49110688 - 49110634
Alignment:
Q  178 actattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||| |||||||| |||||||||| ||||||||||| |||| |||||||||    
T  49110688 actattcaaatgatttactttgaccatattttttaactaatatattaatacaaat 49110634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 200 - 248
Target Start/End: Complemental strand, 37467503 - 37467455
Alignment:
Q  200 accatactttttaactaacatataaatacaaatattagcatgtaagatt 248  Q
    |||||| ||||||||||| |||||||||||||| ||||||| |||||||    
T  37467503 accatattttttaactaatatataaatacaaatgttagcatttaagatt 37467455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 232
Target Start/End: Original strand, 42662248 - 42662284
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||||||||||||||| ||||||||||||||    
T  42662248 tttgaccatactttttaactaatatataaatacaaat 42662284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 3851136 - 3851187
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| |||||||||||||||  ||||||||||||||||| || |||||||    
T  3851136 tttgacaatactttttaactaatgtataaatacaaatattaacacgtaagat 3851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 5788596 - 5788526
Alignment:
Q  177 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||  ||| ||| ||| | |||||||||| |||||  |||||||||||||||||| |||||||||    
T  5788596 cactattcaattgacttactttaatcatacttttttactaatgtataaatacaaatattagtatgtaagat 5788526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 247
Target Start/End: Original strand, 34750550 - 34750615
Alignment:
Q  182 ttcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| |||| ||| ||||||| |||||||||||||| ||| ||||| |||| ||| ||||||||||    
T  34750550 ttcacatgacttactttgaccctactttttaactaatatacaaataaaaatgttaacatgtaagat 34750615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 178 - 247
Target Start/End: Complemental strand, 41134701 - 41134637
Alignment:
Q  178 actattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| ||| ||| ||||||||||     |||||||  ||||||||||||||||||||||||||||    
T  41134701 actattcatttgacttactttgaccata-----taactaatgtataaatacaaatattagcatgtaagat 41134637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 19120719 - 19120679
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||| ||| ||||||||| |||||||||||||||||||    
T  19120719 tttttaattaatatataaatataaatattagcatgtaagat 19120679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Original strand, 21379817 - 21379857
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| ||||  ||||||||||||||||||||||||||||    
T  21379817 tttttagctaatgtataaatacaaatattagcatgtaagat 21379857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 23707612 - 23707572
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||  ||||||||||||||||||||||| ||||    
T  23707612 tttttaactaatgtataaatacaaatattagcatgtgagat 23707572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 35570238 - 35570198
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| ||| |||||||||| ||||||||||||||    
T  35570238 tttttaactaatatacaaatacaaattttagcatgtaagat 35570198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 232
Target Start/End: Complemental strand, 38767259 - 38767223
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||| ||||||||||| ||||||||||||||    
T  38767259 tttgaccatattttttaactaatatataaatacaaat 38767223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 47526025 - 47525985
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |||||||||||||| ||||||| ||||||    
T  47526025 tttttaactaatatataaatacaaatgttagcatttaagat 47525985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 69; Significance: 5e-31; HSPs: 56)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 127 - 247
Target Start/End: Complemental strand, 38416919 - 38416799
Alignment:
Q  127 tgaaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaat 226  Q
    ||||| ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||    
T  38416919 tgaaaaatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaat 38416820  T
Q  227 acaaatattagcatgtaagat 247  Q
    |||||||||||||||||||||    
T  38416819 acaaatattagcatgtaagat 38416799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 35381157 - 35381043
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  35381157 atactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaat 35381058  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  35381057 attagcatgtaagat 35381043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 131 - 240
Target Start/End: Original strand, 25101717 - 25101826
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    ||||| |||||| |||||||||||||| | | ||||||||||| |  | |||| |||||||||||||||||||||||||||||||||||||||||| |||    
T  25101717 atatattccctctatttcaaaatacatgttgcatttttgcaatgtgtattatttatatgatttattttgaccatactttttaactaacatataaattcaa 25101816  T
Q  231 atattagcat 240  Q
    ||||||||||    
T  25101817 atattagcat 25101826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 26169986 - 26170099
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||||||| ||||||||||||||||||||||  ||||||||||||||    
T  26169986 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaata 26170085  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  26170086 ttagcatgtaagat 26170099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 55209836 - 55209723
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||||||| |||||||||||||||||||||| |||||||||||||||    
T  55209836 tactccctccgtttcaaaatacatgtccaatttttccaatgtgcactattcacttgatttactttgaccatactttttaactaatatataaatacaaata 55209737  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  55209736 ttagcatgtaagat 55209723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 12625262 - 12625364
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   ||||||||||||| |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12625262 tttcaaaatacatgttcaatttttgcaatatgcactattcatctgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 12625361  T
Q  245 gat 247  Q
    |||    
T  12625362 gat 12625364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 44232328 - 44232226
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  44232328 tttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 44232229  T
Q  245 gat 247  Q
    |||    
T  44232228 gat 44232226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 31010214 - 31010327
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||| ||||||||||||| ||  ||||||| ||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||| |||||    
T  31010214 tactccctcggtttcaaaatacatatccaatttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaataaaaata 31010313  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  31010314 ttagcatgtaagat 31010327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 7614613 - 7614728
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||| ||  ||||||||||||| ||||| |||| ||||||| | || ||| |||| |||||||||||||| ||||||||||| |||||||||||||    
T  7614613 tatactccatccgtttcaaaatacatgtcgtaattttacaatatatattaatcacatgacttattttgaccatattttttaactaatatataaatacaaa 7614712  T
Q  232 tattagcatgtaagat 247  Q
    | ||||||||||||||    
T  7614713 tgttagcatgtaagat 7614728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 132 - 247
Target Start/End: Original strand, 38716885 - 38716999
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||||||  ||||||||||||| ||  ||||||||||| | ||||||| || ||| ||| ||||||||||||||||||||||  ||||||||||||    
T  38716885 tatactccctctgtttcaaaatacatgtccaatttttgcaatgtgcactattaat-tgacttactttgaccatactttttaactaatgtataaatacaaa 38716983  T
Q  232 tattagcatgtaagat 247  Q
    ||||||||||||||||    
T  38716984 tattagcatgtaagat 38716999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 12240429 - 12240327
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  |||||| |||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  12240429 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 12240330  T
Q  245 gat 247  Q
    |||    
T  12240329 gat 12240327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 25296831 - 25296729
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  25296831 tttcaaaatacatatctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 25296732  T
Q  245 gat 247  Q
    |||    
T  25296731 gat 25296729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 2760989 - 2760876
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||| ||||||||||| |||||||||||||||    
T  2760989 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaata 2760890  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  2760889 ttagcatgtaagat 2760876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 29830343 - 29830456
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||  ||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  29830343 tactccctccgtttcaaaatacatgtccaatttttttaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 29830442  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  29830443 ttagcatgtaagat 29830456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 54330952 - 54330839
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  |||| |||||||| ||  ||||||||||| | | |||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  54330952 tactccctccgtttcgaaatacatgtccaatttttgcaatgtgcgctattcacttgacttactttgaccatactttttaactaatatataaatacaaata 54330853  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  54330852 ttagcatgtaagat 54330839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 3036991 - 3037090
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||||| || | |||| |  |||||||| |||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  3036991 tttcaaaatacatgtcgtaattatacaatgtgtactattcacatgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 3037090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 36523219 - 36523117
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||| || ||| ||||||||||||| ||||||| | |||| ||| |||||| ||||||||||||||| |||||||||||||| ||| |||||||    
T  36523219 tttcaaaatatatgtcgcatttttgcaatatgcactatttacatgacttactttgactatactttttaactaatatataaatacaaatgttaacatgtaa 36523120  T
Q  245 gat 247  Q
    |||    
T  36523119 gat 36523117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 43967734 - 43967836
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   ||||||||||| | ||||||| |  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  43967734 tttcaaaatacatgttcaatttttgcaatgtgcactattaacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 43967833  T
Q  245 gat 247  Q
    |||    
T  43967834 gat 43967836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 17610280 - 17610393
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||| ||||||||| ||  ||||||||||||| |||||||||  ||| ||| |||||||||| |||||| ||||  ||||||||||||||    
T  17610280 tactccctccgttttaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatattttttagctaatgtataaatacaaata 17610379  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  17610380 ttagcatgtaagat 17610393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 35686373 - 35686486
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  | | ||| ||||||||||||||||||||||  ||||||||||||||    
T  35686373 tactccctcagtttcaaaatacatgtccaatttttgcaatgtgcactattcacttaacttactttgaccatactttttaactaatgtataaatacaaata 35686472  T
Q  234 ttagcatgtaagat 247  Q
    ||| ||||||||||    
T  35686473 ttatcatgtaagat 35686486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 47386552 - 47386435
Alignment:
Q  130 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 229  Q
    |||||||||||||  ||||||||||||| ||   |||||| ||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||    
T  47386552 aatatactccctccgtttcaaaatacatgtccactttttggaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaataca 47386453  T
Q  230 aatattagcatgtaagat 247  Q
    ||||||||||||||||||    
T  47386452 aatattagcatgtaagat 47386435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 134 - 242
Target Start/End: Complemental strand, 27407881 - 27407773
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    ||||||||| ||||||||||||||  || ||||||||| | |  |||||||| || | ||| ||||||| |||||||||||||| |||||||||||||||    
T  27407881 tactccctccatttcaaaatacatgacgcatttttgcagtgtgaactattcacataacttactttgaccctactttttaactaatatataaatacaaata 27407782  T
Q  234 ttagcatgt 242  Q
    |||||||||    
T  27407781 ttagcatgt 27407773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 39307707 - 39307806
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||| ||||||||||||||| ||||||| |||| ||| |||||   |||||||||||||| |||||||||||||| |||| ||||||    
T  39307707 tttcaaaatacatgtcgcatttttgcaatataccctattcacatgacttactttgatgctactttttaactaatatataaatacaaatgttagtatgtaa 39307806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 2571133 - 2571031
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||  ||| | || |||||| ||||||||||||||| ||| ||||||||||| |||||||||||||| |||||||||||    
T  2571133 tttcaaaatacatgtcacatttttataatgtgcattattcacatgatttattttgactatattttttaactaatatataaatacaaatgttagcatgtaa 2571034  T
Q  245 gat 247  Q
    |||    
T  2571033 gat 2571031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 38721336 - 38721450
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||| |||| ||||||||| ||| |||||| |||| |  | |||||| |||| ||||||||| |||| |||||||| || ||||||||||||||    
T  38721336 atactccctccattttaaaatacatgtcgcattttttcaatgtgtattattcacatgacttattttgatcatattttttaacaaatatataaatacaaat 38721435  T
Q  233 attagcatgtaagat 247  Q
     ||||||||||||||    
T  38721436 gttagcatgtaagat 38721450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 50205754 - 50205856
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||   |||||| ||| | |||||||||| ||| ||| |||||||||||||||||||||| ||||||||||||||||||||  ||||    
T  50205754 tttcaaaatacatgtcaagtttttgtaatgtgcactattcatttgacttactttgaccatactttttaactaatatataaatacaaatattagctcgtaa 50205853  T
Q  245 gat 247  Q
    |||    
T  50205854 gat 50205856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 27755730 - 27755836
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaac----atataaatacaaatattagcat 240  Q
    ||||||||||||| ||| ||||||| ||| |||| | ||||||| | |||||||||||||||||||||||||||    |||||||||||||| ||||||     
T  27755730 tttcaaaatacatgtcgcatttttgtaatgtacattgttcatataacttattttgaccatactttttaactaacatatatataaatacaaatgttagcac 27755829  T
Q  241 gtaagat 247  Q
    |||||||    
T  27755830 gtaagat 27755836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 45291862 - 45291945
Alignment:
Q  164 tttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| |||| | |||||||||  ||| ||| ||||| |||||||||||||||| |||||||||||||||||||||||||||||    
T  45291862 tttttccaatgtgcactattcacttgacttactttgatcatactttttaactaatatataaatacaaatattagcatgtaagat 45291945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 25918218 - 25918316
Alignment:
Q  149 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| ||  ||||||||||| | |||||||||  ||| ||||||||||| ||||||||||| ||  |||||||| |||||||||||||||||||    
T  25918218 aaaatacatgtccaatttttgcaatgtgcactattcacttgaattattttgaccctactttttaaccaatgtataaatataaatattagcatgtaagat 25918316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 55800863 - 55800941
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatg 241  Q
    ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||    
T  55800863 atttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatg 55800941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 26125737 - 26125821
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| |||||| || ||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  26125737 atttttacaatatgcattattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaagat 26125821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 137 - 247
Target Start/End: Complemental strand, 17446892 - 17446782
Alignment:
Q  137 tccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatta 236  Q
    |||||| |||| |||||| || ||  |||||| |||| | |||||||||| ||| | | ||||||||||| ||||||||||  |||||||||||||||||    
T  17446892 tccctccattttaaaatatatgtccaatttttacaatgtgcactattcatttgactaactttgaccatacattttaactaatgtataaatacaaatatta 17446793  T
Q  237 gcatgtaagat 247  Q
     ||||||||||    
T  17446792 acatgtaagat 17446782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 150 - 240
Target Start/End: Complemental strand, 56297948 - 56297858
Alignment:
Q  150 aaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcat 240  Q
    |||||||| |||||||||| |||| |||| |||||| || | || ||||||||||| || |||||||| |||||||||||||| |||||||    
T  56297948 aaatacatgtcgtatttttacaatgtacattattcacataacttgttttgaccatatttattaactaatatataaatacaaatgttagcat 56297858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 163 - 244
Target Start/End: Original strand, 19595734 - 19595815
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||| |||||| |||||||||  ||| ||| ||| |||||||| |||||||||  |||||||||||||||||||||||||    
T  19595734 atttttacaatatgcactattcacttgacttactttaaccatactctttaactaatgtataaatacaaatattagcatgtaa 19595815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 145 - 221
Target Start/End: Original strand, 5428589 - 5428665
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacata 221  Q
    ||||||||||||| ||| ||||| ||||| | ||||||||| |||| |||  |||||||||||||||||||||||||    
T  5428589 tttcaaaatacatgtcgcattttggcaatgtgcactattcacatgacttacgttgaccatactttttaactaacata 5428665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 50620915 - 50620831
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| ||||||| |||||||||  | | ||| ||||||||||| ||||||||||  ||||||||| ||||||||||||||||||    
T  50620915 attttagcaatatgcactattcacttaacttactttgaccatacattttaactaatgtataaatactaatattagcatgtaagat 50620831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 4467719 - 4467668
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| |||||||||||||||  ||||||||||||||||||||||||||||    
T  4467719 tttgactatactttttaactaatgtataaatacaaatattagcatgtaagat 4467668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 9029649 - 9029598
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||||||||||||||  |||||||||||||||||||| |||||||    
T  9029649 tttgaccatactttttaactaatgtataaatacaaatattagcacgtaagat 9029598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 20875498 - 20875396
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| | ||| ||||  ||| | |||||||||||| ||||| |||||||||| ||||||||||| ||||||||  |||| || |||| |||    
T  20875498 tttcaaaatacatgttgtaattttaaaatgtgcactattcatataatttactttgaccatattttttaactaatatataaatgtaaatgtttgcatataa 20875399  T
Q  245 gat 247  Q
    |||    
T  20875398 gat 20875396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 163 - 241
Target Start/End: Original strand, 55191853 - 55191931
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatg 241  Q
    ||||||||||| | |||||||||| ||| ||| |||||| ||||||||||| |||  | ||||||||||||||||||||    
T  55191853 atttttgcaatgtgcactattcatttgacttactttgactatactttttaattaatgtgtaaatacaaatattagcatg 55191931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 144 - 232
Target Start/End: Original strand, 23360188 - 23360273
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||||||| ||| ||||||||||||| ||||||||  |||| ||| ||||||| || ||||||||||| |||| |||||||||    
T  23360188 atttcaaaatacatgtcgcatttttgcaatatgcactattc--atgacttactttgacc-tattttttaactaatatatgaatacaaat 23360273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 165 - 245
Target Start/End: Original strand, 29051715 - 29051793
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaag 245  Q
    |||| ||||||||| |||||| || | ||| |||||||||| ||||||||||| ||||||||||||  |||||||||||||    
T  29051715 ttttacaatatacattattcacataacttactttgaccatattttttaactaatatataaatacaa--attagcatgtaag 29051793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 19433624 - 19433507
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccata----ctttttaactaacatataaataca 229  Q
    |||||||||  ||||||||||||| |   ||||||||||| | |||| ||||  ||| ||| ||||||||||    |||||||||||   ||||||||||    
T  19433624 tactccctctgtttcaaaatacatgttcaatttttgcaatgtgcacttttcacttgacttactttgaccatatatactttttaactattgtataaataca 19433525  T
Q  230 aatattagcatgtaagat 247  Q
    ||||||||||||||||||    
T  19433524 aatattagcatgtaagat 19433507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 14144657 - 14144606
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||| | ||||||||||| ||||||||||||||||||| |||||||||    
T  14144657 tttgaccacattttttaactaatatataaatacaaatattagtatgtaagat 14144606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 248
Target Start/End: Complemental strand, 6013218 - 6013165
Alignment:
Q  194 attttgaccatactttttaactaacatataaatacaaatattagcatgtaagatt 248  Q
    |||||||||||| |||||||||||||||||||||  ||||| |||||||||||||    
T  6013218 attttgaccatattttttaactaacatataaata-taatatgagcatgtaagatt 6013165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 181 - 247
Target Start/End: Complemental strand, 19903865 - 19903799
Alignment:
Q  181 attcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| || ||||| ||||||||||  |||||||||| |||||||||||||| ||||||||| ||||    
T  19903865 attcacataatttactttgaccatatattttaactaatatataaatacaaatgttagcatgtgagat 19903799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 247
Target Start/End: Original strand, 34316536 - 34316633
Alignment:
Q  149 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| || |||||||||| || | | ||||||| |||||| ||| ||||| |||| || |||||||| |||||||||||||| ||||||| ||||||    
T  34316536 aaaatatatgtcgtatttttacagtgtgcactatttatatgacttactttgatcata-ttgttaactaatatataaatacaaatgttagcatataagat 34316633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 235
Target Start/End: Complemental strand, 34652298 - 34652208
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatt 235  Q
    ||||||||||||| ||  ||||||| ||| |  |||||| | | || ||| || ||||||| |||||||||||||||||||||||||||||    
T  34652298 tttcaaaatacatgtcacatttttgtaatgtgtactatttacacgacttacttcgaccatattttttaactaacatataaatacaaatatt 34652208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 10550455 - 10550539
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttt--taactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| |||||| ||||||||| ||| |||| ||| |||||| ||||  ||||||| ||||||||| |||| ||||||||||||||    
T  10550455 ttttacaatatgcactattcacatggtttactttaaccatattttttttaactaatatataaataaaaatgttagcatgtaagat 10550539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 131 - 247
Target Start/End: Complemental strand, 37767223 - 37767107
Alignment:
Q  131 atatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaa 230  Q
    ||||||||||||  ||| |||||  || ||| | ||||| ||||| ||||||| |  ||| ||| |||||| ||||||||||||  | ||||||||||||    
T  37767223 atatactccctccgttttaaaatgaatgtcgcaattttgaaatatgcactatttacgtgacttactttgactatactttttaacgtatatataaatacaa 37767124  T
Q  231 atattagcatgtaagat 247  Q
    || |||| |||||||||    
T  37767123 atgttagaatgtaagat 37767107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 166 - 248
Target Start/End: Complemental strand, 5472181 - 5472099
Alignment:
Q  166 tttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatt 248  Q
    ||||||||||  | |||||| || ||||| |||||||| |||||||||  || |||||||||||||| |||| ||||| ||||    
T  5472181 tttgcaatatgtattattcacataatttaatttgaccacactttttaatcaatatataaatacaaatgttagtatgtatgatt 5472099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 50181128 - 50181173
Alignment:
Q  202 catactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| ||||||| |||  ||||||||||||||||||||||||||||    
T  50181128 catattttttaattaatgtataaatacaaatattagcatgtaagat 50181173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 207 - 244
Target Start/End: Complemental strand, 51456543 - 51456506
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||| |||||||||||||| |||||||||||    
T  51456543 tttttaactaatatataaatacaaattttagcatgtaa 51456506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 127 - 247
Target Start/End: Original strand, 54610855 - 54610976
Alignment:
Q  127 tgaaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacac-tattcatatgatttattttgaccatactttttaactaacatataaa 225  Q
    |||||||||||| |||  |||||||||| || |   ||||||||||| ||||| ||||||  ||| ||| ||| | |||| ||||||| |||  ||||||    
T  54610855 tgaaatatactctctccgtttcaaaatatatgtttaatttttgcaatgtacacttattcacttgacttactttaatcatattttttaattaatgtataaa 54610954  T
Q  226 tacaaatattagcatgtaagat 247  Q
    |||| ||||||| |||||||||    
T  54610955 tacagatattagtatgtaagat 54610976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 165 - 213
Target Start/End: Complemental strand, 8435768 - 8435720
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaa 213  Q
    ||||||||| || | ||||||||| ||||||||||| ||||||||||||    
T  8435768 ttttgcaatgtatattattcatattatttattttgatcatactttttaa 8435720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 219 - 247
Target Start/End: Complemental strand, 34652193 - 34652165
Alignment:
Q  219 atataaatacaaatattagcatgtaagat 247  Q
    |||||||||||||||||||||||||||||    
T  34652193 atataaatacaaatattagcatgtaagat 34652165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 68; Significance: 2e-30; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 134 - 245
Target Start/End: Original strand, 16865054 - 16865165
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    ||||| ||| |||| ||||||||| ||| |||||| ||||||||| ||||||||||| ||| |||||| ||||||||||||||||||||||||||||||     
T  16865054 tactcactctattttaaaatacatgtcgcatttttacaatatacaatattcatatgacttactttgacgatactttttaactaacatataaatacaaatg 16865153  T
Q  234 ttagcatgtaag 245  Q
    ||||||||||||    
T  16865154 ttagcatgtaag 16865165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 19141329 - 19141215
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  19141329 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 19141230  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  19141229 attagcatgtaagat 19141215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 8042284 - 8042171
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  8042284 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 8042185  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  8042184 ttagcatgtaagat 8042171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 136 - 247
Target Start/End: Original strand, 5404998 - 5405109
Alignment:
Q  136 ctccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatt 235  Q
    |||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||||    
T  5404998 ctccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatatt 5405097  T
Q  236 agcatgtaagat 247  Q
    ||||||||||||    
T  5405098 agcatgtaagat 5405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 7608060 - 7608162
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  7608060 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 7608159  T
Q  245 gat 247  Q
    |||    
T  7608160 gat 7608162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 7799858 - 7799960
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||| ||||||||||| | ||||||||| |||| ||| ||||||| |||||||||||||| |||||||||||||| |||||||||||    
T  7799858 tttcaaaatacatgtcgcatttttgcaatgtgcactattcacatgacttactttgaccctactttttaactaatatataaatacaaatgttagcatgtaa 7799957  T
Q  245 gat 247  Q
    |||    
T  7799958 gat 7799960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 39358145 - 39358259
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  39358145 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 39358244  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  39358245 attagcatgtaagat 39358259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 44365168 - 44365270
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||||| |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  44365168 tttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 44365267  T
Q  245 gat 247  Q
    |||    
T  44365268 gat 44365270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 11841841 - 11841742
Alignment:
Q  148 caaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| ||  ||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||  ||||||||||||||||||||||||||||    
T  11841841 caaaatacatgtccaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaagat 11841742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 2183220 - 2183106
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||| |||||||||    
T  2183220 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtatgaatacaaat 2183121  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  2183120 attagcatgtaagat 2183106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 6223077 - 6223179
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  6223077 tttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 6223176  T
Q  245 gat 247  Q
    |||    
T  6223177 gat 6223179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 145 - 249
Target Start/End: Original strand, 19262691 - 19262795
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  |||||| |||| | ||||||| || | | ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  19262691 tttcaaaatacatgtccaattttttcaatgtgcactatttatttaacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 19262790  T
Q  245 gattg 249  Q
    |||||    
T  19262791 gattg 19262795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 144 - 247
Target Start/End: Original strand, 36072184 - 36072287
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 243  Q
    |||||||||||||| ||  |||||| |||||| |||||||||| ||| ||| ||||| |||| |||||||||||  |||||||| |||||||||||||||    
T  36072184 atttcaaaatacatgtccaatttttacaatatgcactattcatttgacttactttgatcatattttttaactaatgtataaatataaatattagcatgta 36072283  T
Q  244 agat 247  Q
    ||||    
T  36072284 agat 36072287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 11931702 - 11931804
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||| | |||| |||||| || ||||||||| | ||| |||||||||| ||||||||||| |||||||||||||| ||||||| |||    
T  11931702 tttcaaaatacatgtcgcaattttacaatatgcattattcatataacttactttgaccatattttttaactaatatataaatacaaatgttagcatttaa 11931801  T
Q  245 gat 247  Q
    |||    
T  11931802 gat 11931804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 42133751 - 42133865
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||  |||||||||||||| ||||| ||||  ||| | ||||||||||||  |||| ||||| |||| ||||||||||| ||||||||||||||    
T  42133751 atactcccttcatttcaaaatacatgtcgtaattttaaaatgtgcactattcatatagtttactttgatcatattttttaactaatatataaatacaaat 42133850  T
Q  233 attagcatgtaagat 247  Q
     |||||||| |||||    
T  42133851 gttagcatgaaagat 42133865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 247
Target Start/End: Complemental strand, 24093789 - 24093685
Alignment:
Q  144 atttcaaaatacatttcgtattttt-gcaatatacactattcatatgatttattttgaccatact-ttttaactaacatataaatacaaatattagcatg 241  Q
    |||||||||||||| |||||||||| || || | | |||||| ||||||||| |||||||||||| ||||||||||||||| ||||||||| ||||||||    
T  24093789 atttcaaaatacatgtcgtattttttgcgatgtgcgctattcgtatgatttactttgaccatacttttttaactaacatat-aatacaaatgttagcatg 24093691  T
Q  242 taagat 247  Q
    ||||||    
T  24093690 taagat 24093685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 144 - 248
Target Start/End: Complemental strand, 43444792 - 43444688
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 243  Q
    |||||||||||||| ||| | |||| |||| | || |||||| || ||||  |||||||||| ||||||||||| |||||||||||||| ||||||||||    
T  43444792 atttcaaaatacatgtcgcaattttacaatgtgcattattcacataattttctttgaccatattttttaactaatatataaatacaaatgttagcatgta 43444693  T
Q  244 agatt 248  Q
    |||||    
T  43444692 agatt 43444688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 24251971 - 24252070
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||||||  | |||| ||||||  | |||||| || | |||||||||||||| ||||||||||| |||||||||||||| |||||||||||    
T  24251971 tttcaaaatacatttcacaattttacaatatgtattattcacataacttattttgaccatattttttaactaatatataaatacaaatgttagcatgtaa 24252070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 145 - 234
Target Start/End: Original strand, 33607387 - 33607476
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatat 234  Q
    ||||||||||||| ||  |||||| |||| | |||||||||| ||| ||| |||||  |||||||||||||||  |||||||||||||||    
T  33607387 tttcaaaatacatgtccaatttttacaatgtgcactattcatttgacttactttgattatactttttaactaatgtataaatacaaatat 33607476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 159 - 247
Target Start/End: Complemental strand, 36177815 - 36177726
Alignment:
Q  159 tcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| |||||||||   || |||||| ||||||||||||||||||| ||||| |||||| ||||||||| |||||||| ||| ||||||    
T  36177815 tcgtaattttgcaatgcgcattattcacatgatttattttgaccatatttttttaactaatatataaataaaaatattaacatctaagat 36177726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 133 - 241
Target Start/End: Complemental strand, 9007047 - 9006939
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||| || |||||||||||||| ||| | |||| |||| | || ||||||| |   ||| |||||||||| |||||||||||  |||||||||||||    
T  9007047 atactccatccatttcaaaatacatgtcgcaattttacaatgtgcattattcatgtagcttactttgaccatattttttaactaatttataaatacaaat 9006948  T
Q  233 attagcatg 241  Q
     ||||||||    
T  9006947 gttagcatg 9006939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 44644932 - 44644983
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||||||||||||| ||||||||| |||||||| ||| ||||||    
T  44644932 tttgaccatactttttaactaatatataaatataaatattaacatataagat 44644983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 38839136 - 38839186
Alignment:
Q  197 ttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| ||||||||||| |||||||||||||| ||||||| ||||||    
T  38839136 ttgaccatattttttaactaatatataaatacaaatgttagcatataagat 38839186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 174 - 247
Target Start/End: Complemental strand, 13125367 - 13125294
Alignment:
Q  174 atacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| |||||||  ||| ||| ||| |||||| |||||||||||  ||||||||||||||||||||| ||||||    
T  13125367 atactctattcacttgacttactttcaccatattttttaactaatgtataaatacaaatattagcatctaagat 13125294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 177 - 246
Target Start/End: Complemental strand, 31610872 - 31610803
Alignment:
Q  177 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaaga 246  Q
    ||||||||| || | ||||||| |||||  ||||||||||| |||||||||||||| |||| ||||||||    
T  31610872 cactattcacataacttatttttaccattttttttaactaatatataaatacaaatgttagaatgtaaga 31610803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 9172346 - 9172295
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| |||||||||||  ||||||||||||  ||||||||||||||    
T  9172346 tttgaccatattttttaactaatgtataaatacaaaagttagcatgtaagat 9172295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 177 - 216
Target Start/End: Original strand, 13598484 - 13598523
Alignment:
Q  177 cactattcatatgatttattttgaccatactttttaacta 216  Q
    |||||||||||||| ||| |||||||||||||||||||||    
T  13598484 cactattcatatgacttactttgaccatactttttaacta 13598523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 22839191 - 22839076
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||| || ||||||||||| ||||   |  |||||||| | ||||||||| || | ||| |||||||||| ||||||||||  ||||||||  |||    
T  22839191 tatactccttccatttcaaaatatattttacaaatttgcaatgtgcactattcacataacttactttgaccatattttttaactagtatataaattaaaa 22839092  T
Q  232 tattagcatgtaagat 247  Q
    | ||||||| ||||||    
T  22839091 tgttagcatataagat 22839076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 32774653 - 32774704
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||||||||||||| ||||| ||| ||||||||  |||||||||    
T  32774653 tttgaccatactttttaactaatatatacatataaatattaatatgtaagat 32774704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Original strand, 38292014 - 38292065
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| ||||||||||  |||||||||||||| ||| ||||||||||    
T  38292014 tttgaccatattttttaactagtatataaatacaaatgttaacatgtaagat 38292065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 190 - 244
Target Start/End: Complemental strand, 3837325 - 3837271
Alignment:
Q  190 atttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||| ||| || ||||||||||| ||||||||| |||||| |||||||||    
T  3837325 atttattttaaccgtattttttaactaatatataaatataaatatcagcatgtaa 3837271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Complemental strand, 31904078 - 31904029
Alignment:
Q  198 tgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||| ||||||||||| ||||||||| |||||||| || |||||||    
T  31904078 tgaccatattttttaactaatatataaatataaatattatcacgtaagat 31904029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 67; Significance: 7e-30; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 616782 - 616896
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  616782 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 616881  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  616882 attagcatgtaagat 616896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 623175 - 623289
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  623175 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 623274  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  623275 attagcatgtaagat 623289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 42587511 - 42587397
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  42587511 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 42587412  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  42587411 attagcatgtaagat 42587397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 3100746 - 3100644
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | ||||||| |  ||||||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  3100746 tttcaaaatacatgtccaatttttgcaatgtgcactatttacttgatttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 3100647  T
Q  245 gat 247  Q
    |||    
T  3100646 gat 3100644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 40494395 - 40494497
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  40494395 tttcaaaatacatgtccaatttttccaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 40494494  T
Q  245 gat 247  Q
    |||    
T  40494495 gat 40494497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 41263810 - 41263923
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    ||||| ||| |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||    
T  41263810 tactctctccatttcaaaatacatatccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 41263909  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  41263910 ttagcatgtaagat 41263923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 129 - 247
Target Start/End: Complemental strand, 13216988 - 13216870
Alignment:
Q  129 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 228  Q
    ||||||||||| |  |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||     
T  13216988 aaatatactccttacatttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatat 13216889  T
Q  229 aaatattagcatgtaagat 247  Q
    ||||||||||||| |||||    
T  13216888 aaatattagcatgaaagat 13216870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 14237291 - 14237393
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  14237291 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaa 14237390  T
Q  245 gat 247  Q
    |||    
T  14237391 gat 14237393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 18044436 - 18044538
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  18044436 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaa 18044535  T
Q  245 gat 247  Q
    |||    
T  18044536 gat 18044538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 32998461 - 32998563
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  |||||||||||||||||||||||||    
T  32998461 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattagcatgtaa 32998560  T
Q  245 gat 247  Q
    |||    
T  32998561 gat 32998563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 38957181 - 38957283
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||| || ||  ||||||||||| | ||||||| |  ||||||| |||||||||| |||||||||||| |||||||||||||||||||||||||    
T  38957181 tttcaaaatatatgtccaatttttgcaatgtgcactattaacttgatttactttgaccatattttttaactaacgtataaatacaaatattagcatgtaa 38957280  T
Q  245 gat 247  Q
    |||    
T  38957281 gat 38957283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 2766299 - 2766197
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | ||||||| |  ||| ||| ||||||||||||||||||||||  |||||||| ||||||||||||||||    
T  2766299 tttcaaaatacatatccaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatataaatattagcatgtaa 2766200  T
Q  245 gat 247  Q
    |||    
T  2766199 gat 2766197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 36642121 - 36642007
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccat-actttttaactaacatataaatacaaat 232  Q
    |||||||||  ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| ||||||||| ||||||||||| | ||||||||||||||    
T  36642121 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccattactttttaacttatatataaatacaaat 36642022  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  36642021 attagcatgtaagat 36642007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 5878317 - 5878429
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  |||| |||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||    
T  5878317 tactccctccgtttccaaatacatgtcc-atttttgcaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaata 5878415  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  5878416 ttagcatgtaagat 5878429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Original strand, 5173282 - 5173364
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| |  ||||||||||||||||| ||||| |||| | ||||||||| |||||||||||||||||| ||||||||||    
T  5173282 ttttgcaatgtgtactattcatatgatttactttgatcatattatttaactaatatataaatacaaatattaacatgtaagat 5173364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 35403527 - 35403629
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  |||  || ||||||||||||||||||||||  |||||||||| |||||| |||||||    
T  35403527 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacatactttgaccatactttttaactaatgtataaatacagatattaacatgtaa 35403626  T
Q  245 gat 247  Q
    |||    
T  35403627 gat 35403629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 132017 - 132130
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||   |||||||||  | |||||||||  ||| ||| ||||| |||| |||||||||||  ||||||||||||||    
T  132017 tactccctccgtttcaaaatacatgtccactttttgcaacgtgcactattcacttgacttactttgatcatattttttaactaatgtataaatacaaata 132116  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  132117 ttagcatgtaagat 132130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 163 - 237
Target Start/End: Complemental strand, 22489507 - 22489433
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattag 237  Q
    ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||||||    
T  22489507 atttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattag 22489433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 8394346 - 8394459
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||| | |||||||||||  ||||| ||||||||    
T  8394346 tactccctccgtttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccaaattttttaactaatgtataagtacaaata 8394445  T
Q  234 ttagcatgtaagat 247  Q
    |||| || ||||||    
T  8394446 ttagtatttaagat 8394459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 11637811 - 11637895
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| |||| | |||||||||  ||| ||||||||||| |||||||||||||   ||||||||||| ||||||||||||||||    
T  11637811 atttttacaatgtgcactattcacttgacttattttgaccgtactttttaactagtgtataaatacaagtattagcatgtaagat 11637895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 149 - 244
Target Start/End: Complemental strand, 4270339 - 4270244
Alignment:
Q  149 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||| ||  ||||||| ||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||||||||| |||||||    
T  4270339 aaaatacatgtccaatttttgtaatgtgcactattcacttgacttactttgaccatattttttaactaatgtataaatacaaatattaacatgtaa 4270244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 163 - 244
Target Start/End: Complemental strand, 6414198 - 6414117
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||| | ||||||||| |||| ||| |||||||||||||||||| ||| |||||||| |||| ||| | ||||||    
T  6414198 atttttgcaatgtgcactattcacatgacttactttgaccatactttttaaataatatataaatgcaaagattggtatgtaa 6414117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 165 - 236
Target Start/End: Original strand, 24524131 - 24524202
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatta 236  Q
    ||||||||| | ||||||| |  ||| ||| ||||||||||||||||||||||  |||||||||||||||||    
T  24524131 ttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatgtataaatacaaatatta 24524202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 134 - 245
Target Start/End: Complemental strand, 40204984 - 40204873
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    ||||||||| ||||| |||||||| ||||| ||||  ||| | ||||||||||   | ||| ||||| |||| ||||| ||||| ||||||||||||||     
T  40204984 tactccctctatttctaaatacatgtcgtaattttaaaatgtgcactattcatccaacttactttgaacatattttttgactaatatataaatacaaatg 40204885  T
Q  234 ttagcatgtaag 245  Q
    |||||| |||||    
T  40204884 ttagcaggtaag 40204873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 149 - 247
Target Start/End: Complemental strand, 3370503 - 3370405
Alignment:
Q  149 aaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |  |||||||||| |  ||| |||| |||| ||| |||||||||| ||||||| ||| |||||||||||||| |||  |||||||||    
T  3370503 aaaatacattttgcttttttgcaatgtggactgttcacatgacttactttgaccatattttttaattaatatataaatacaaatgttaatatgtaagat 3370405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 9632166 - 9632268
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||| | |||| |||| |  |||||||| ||  ||||||||   |||| ||||| |||||||||||||||| ||| |||||||||||    
T  9632166 tttcaaaatacatgtcgcaattttacaatgtgtactattcacatagtttattttagtcatattttttcactaacatataaatactaatgttagcatgtaa 9632265  T
Q  245 gat 247  Q
    |||    
T  9632266 gat 9632268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 197 - 247
Target Start/End: Original strand, 18035163 - 18035213
Alignment:
Q  197 ttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| ||||||||||| |||||||| ||||| ||||||||||||||    
T  18035163 ttgaccataatttttaactaatatataaatgcaaatgttagcatgtaagat 18035213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 153 - 247
Target Start/End: Original strand, 18090348 - 18090441
Alignment:
Q  153 tacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||| ||| |||||| |||| | ||||||| |||||| |||||| || |||| ||||||||||| ||||||||| |||| ||||||| ||||||    
T  18090348 tacatgtcgaattttttcaatgtgcactatttatatgacttattt-gatcatattttttaactaatatataaatataaatgttagcatataagat 18090441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 187 - 247
Target Start/End: Original strand, 24729908 - 24729968
Alignment:
Q  187 atgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||||| |||| |||| |||||| |||| | || |||||||||||||||||||    
T  24729908 atgatttattttgatcataattttgaactaatatatgagtataaatattagcatgtaagat 24729968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 132 - 240
Target Start/End: Original strand, 36167074 - 36167182
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||||||  ||| ||||||||| |   ||||||||||| |  ||||||||  ||| ||| |||||  ||||||||| |||||  ||||||||||||    
T  36167074 tatactccctccgttttaaaatacatgtatcatttttgcaatgtgtactattcacttgacttactttgattatactttttcactaatgtataaatacaaa 36167173  T
Q  232 tattagcat 240  Q
    |||||||||    
T  36167174 tattagcat 36167182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 207 - 247
Target Start/End: Complemental strand, 40716712 - 40716672
Alignment:
Q  207 tttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| |||||||||||||| ||||||||||||||    
T  40716712 tttttaactaatatataaatacaaattttagcatgtaagat 40716672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 33700273 - 33700222
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| ||||||||||| |||||||||||||| |||| | |||||||    
T  33700273 tttgaccatattttttaactaatatataaatacaaatgttagtaagtaagat 33700222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 204 - 247
Target Start/End: Original strand, 38497142 - 38497185
Alignment:
Q  204 tactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||||||  |||||||||||||||||||||| |||||    
T  38497142 tactttttaactaatgtataaatacaaatattagcatggaagat 38497185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 129 - 185
Target Start/End: Complemental strand, 13217288 - 13217232
Alignment:
Q  129 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattca 185  Q
    ||||||||||| ||  ||||||||||||| ||  ||||||||||| |||||||||||    
T  13217288 aaatatactccttccgtttcaaaatacatgtccaatttttgcaatgtacactattca 13217232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 36)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 17214047 - 17213933
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    |||||||||| |||||||||||||| ||  ||||||||||| | |||||||||| ||| ||| |||||| |||||||||||||||  |||||||||||||    
T  17214047 atactccctccatttcaaaatacatgtctaatttttgcaatgtgcactattcatttgacttactttgactatactttttaactaatttataaatacaaat 17213948  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  17213947 attagcatgtaagat 17213933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 132 - 247
Target Start/End: Complemental strand, 19088222 - 19088107
Alignment:
Q  132 tatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaa 231  Q
    |||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||| ||||||||||||| |||||||||||||    
T  19088222 tatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaa 19088123  T
Q  232 tattagcatgtaagat 247  Q
    ||||||||||||||||    
T  19088122 tattagcatgtaagat 19088107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 22054783 - 22054885
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||||| |||||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22054783 tttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 22054882  T
Q  245 gat 247  Q
    |||    
T  22054883 gat 22054885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 32414942 - 32414828
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  32414942 atactccctccgtttcaaaatacatgtccaattttttcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 32414843  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  32414842 attagcatgtaagat 32414828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 24624203 - 24624090
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  24624203 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 24624104  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  24624103 ttagcatgtaagat 24624090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 129 - 245
Target Start/End: Original strand, 29790201 - 29790317
Alignment:
Q  129 aaatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatac 228  Q
    ||||||||||| ||  ||||||||||||| ||| | ||||||||| || |||||||| |||| ||| || ||||||| ||||||||||| ||||||||||    
T  29790201 aaatatactccatctgtttcaaaatacatgtcgcaattttgcaatgtatactattcacatgacttacttggaccataatttttaactaatatataaatac 29790300  T
Q  229 aaatattagcatgtaag 245  Q
    |||||||||||||||||    
T  29790301 aaatattagcatgtaag 29790317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 4147930 - 4148044
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  |||||||||||||    
T  4147930 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtataaatacaaat 4148029  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  4148030 attagcatgtaagat 4148044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 6563226 - 6563339
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| |   ||||||||||| | ||||||| |  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  6563226 tactccctccgtttcaaaatacatgttcaatttttgcaatgtgcactatttacttgacttactttgaccatactttttaactaatatataaatacaaata 6563325  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  6563326 ttagcatgtaagat 6563339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 18668954 - 18668837
Alignment:
Q  130 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 229  Q
    |||||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||  |||||||||| |||||||||||  ||||||||||    
T  18668954 aatatactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttgctttgaccatattttttaactaatgtataaataca 18668855  T
Q  230 aatattagcatgtaagat 247  Q
    ||||||||||||||||||    
T  18668854 aatattagcatgtaagat 18668837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 20226549 - 20226448
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   ||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  20226549 tttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 20226450  T
Q  245 ga 246  Q
    ||    
T  20226449 ga 20226448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 145 - 246
Target Start/End: Complemental strand, 22120533 - 22120432
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   ||||||||||| | |||||||||| ||| ||| ||||||||||||||||||||||  |||||||||||||||||||||||||    
T  22120533 tttcaaaatacatgtacaatttttgcaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 22120434  T
Q  245 ga 246  Q
    ||    
T  22120433 ga 22120432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 15383181 - 15383079
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | || ||||||| ||| ||| ||| ||||||||||||||||||  |||||||||||||||||||||||||    
T  15383181 tttcaaaatacatgtccaatttttgcaatgtgcattattcatttgacttactttaaccatactttttaactaatctataaatacaaatattagcatgtaa 15383082  T
Q  245 gat 247  Q
    |||    
T  15383081 gat 15383079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 1040854 - 1040937
Alignment:
Q  164 tttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| | |||||||||  ||||||| ||||||||||||||||||||||  ||||||||||||||||| ||||||||||    
T  1040854 tttttgcaatgtgcactattcacttgatttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaagat 1040937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 145 - 244
Target Start/End: Original strand, 15337499 - 15337598
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||||||  | |||| |||||| || |||||| || | ||| |||||||||| ||||||||||| ||||||||||||||||||||||||||    
T  15337499 tttcaaaatacatttcacaattttacaatatgcattattcacataacttactttgaccatattttttaactaatatataaatacaaatattagcatgtaa 15337598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 4440861 - 4440963
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||| || | | ||||||| ||| | |||||||||||| | ||| |||||||||||||||||  |||||||||||||||||| |||||||||||    
T  4440861 tttcaaaatatatgttgcatttttgtaatgtgcactattcatataacttactttgaccatactttttaggtaacatataaatacaaatgttagcatgtaa 4440960  T
Q  245 gat 247  Q
    |||    
T  4440961 gat 4440963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 17257902 - 17257800
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||||||||||||||||||  || ||||||||||||||||||||||    
T  17257902 tttcaaaatacatgtctaatttttgcaatgtgcattattcacttgacttactttgaccatactttttaactaatgtacaaatacaaatattagcatgtaa 17257803  T
Q  245 gat 247  Q
    |||    
T  17257802 gat 17257800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 32671815 - 32671929
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  | | ||| |||||||||| |||||||||||  |||||||||||||    
T  32671815 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttcacttactttgaccataatttttaactaatgtataaatacaaat 32671914  T
Q  233 attagcatgtaagat 247  Q
    |||||| ||||||||    
T  32671915 attagcgtgtaagat 32671929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 28477763 - 28477864
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 243  Q
    |||||||||||||| ||  | ||||||||| |  |||||||| |||| ||  |||||||||| ||||||||||| |||||||||||||||||||||||||    
T  28477763 atttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatattagcatgta 28477862  T
Q  244 ag 245  Q
    ||    
T  28477863 ag 28477864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 3623940 - 3623859
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| ||||||||| |||||||||  |||| |||||||||| ||||||||||| |||||||||||||| ||||||||||||||    
T  3623940 ttttacaatatacattattcatatagtttactttgaccata-tttttaactaatatataaatacaaatgttagcatgtaagat 3623859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 17155160 - 17155262
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |||| |||||  ||| | ||||||||| ||||  || ||||| |||||||  |||||||||||||||||||||| |||||||||||    
T  17155160 tttcaaaatacatgtcgtttttttaaaatgttcactattcacatgacctactttgatcatacttcataactaacatataaatacaaatgttagcatgtaa 17155259  T
Q  245 gat 247  Q
    |||    
T  17155260 gat 17155262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 165 - 247
Target Start/End: Complemental strand, 19240823 - 19240741
Alignment:
Q  165 ttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| || |||||||| || | |||||||||||||| ||||||||||| ||||||||||||||||| ||| |||||||    
T  19240823 ttttgcaatgtatactattcacataacttattttgaccatattttttaactaatatataaatacaaatatttgcaagtaagat 19240741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 31869719 - 31869821
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |||   |||| |||| ||||||||||  || ||||| |||||||||  ||||||||||| |||||||||||||| |||||||||||    
T  31869719 tttcaaaatacatgtcgcgattttacaatgtacactattcccataatttactttgaccattttttttaactaatatataaatacaaatgttagcatgtaa 31869818  T
Q  245 gat 247  Q
    |||    
T  31869819 gat 31869821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 144 - 245
Target Start/End: Original strand, 29693893 - 29693994
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgta 243  Q
    |||||||||||||| ||  | ||||||||| |  |||||||| |||| ||  |||||||||| ||||||||||| ||||||||||||||| |||||||||    
T  29693893 atttcaaaatacatgtcacaattttgcaatgtgtactattcacatgacttgctttgaccataatttttaactaatatataaatacaaatactagcatgta 29693992  T
Q  244 ag 245  Q
    ||    
T  29693993 ag 29693994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 148 - 247
Target Start/End: Complemental strand, 3989511 - 3989413
Alignment:
Q  148 caaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  | ||||||||| ||||||||||||||||    
T  3989511 caaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgt-taaatacaactattagcatgtaagat 3989413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 192 - 247
Target Start/End: Original strand, 12226033 - 12226088
Alignment:
Q  192 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| ||||||||||||||||  |||||||| |||||||||||||||||||    
T  12226033 ttattttgatcatactttttaactaatgtataaatataaatattagcatgtaagat 12226088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 145 - 248
Target Start/End: Complemental strand, 31569277 - 31569174
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| |||||| ||||||||| | |||  |||||||||||||||||| ||||||    
T  31569277 tttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgactatacttttttattaatgtataaatacaaatattagaatgtaa 31569178  T
Q  245 gatt 248  Q
    ||||    
T  31569177 gatt 31569174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 191 - 248
Target Start/End: Original strand, 5495306 - 5495363
Alignment:
Q  191 tttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagatt 248  Q
    |||||||||| |||  ||||||||||| |||||||||||||| |||||||||||||||    
T  5495306 tttattttgatcatgttttttaactaatatataaatacaaatgttagcatgtaagatt 5495363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 144 - 236
Target Start/End: Complemental strand, 21540881 - 21540789
Alignment:
Q  144 atttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatatta 236  Q
    |||||||||||||| |   |||||| |||| | |||||||||| ||| ||| ||||||||||||||| |||||   |||||||||||||||||    
T  21540881 atttcaaaatacatgtttaatttttacaatgtgcactattcatttgacttactttgaccatacttttaaactagtttataaatacaaatatta 21540789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 163 - 247
Target Start/End: Complemental strand, 24955629 - 24955545
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||| ||| | || ||||||  ||| ||||||||| |||| |||||||||||   |||||||||||||||||||||||||||    
T  24955629 atttttgtaatgtgcattattcacttgacttattttgatcatattttttaactaatgaataaatacaaatattagcatgtaagat 24955545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 178 - 244
Target Start/End: Original strand, 2360034 - 2360100
Alignment:
Q  178 actattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||| |||| ||||| |||||| ||| ||||||||||| ||||||||| |||| |||||||||||    
T  2360034 actatttatataatttactttgactataatttttaactaatatataaataaaaatgttagcatgtaa 2360100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 8101664 - 8101713
Alignment:
Q  198 tgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||| ||||||||||| |||||||||||||| ||| ||||||||||    
T  8101664 tgaccatattttttaactaatatataaatacaaatgttaacatgtaagat 8101713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 134 - 227
Target Start/End: Complemental strand, 25476070 - 25475977
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaata 227  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | || ||||||  ||| ||| ||||||| ||||||||||||||  ||||||||    
T  25476070 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcattattcacttgacttactttgaccttactttttaactaatgtataaata 25475977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 1260492 - 1260544
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatt 248  Q
    |||||||||| ||||||||||| |||||||||||| | |||||| ||||||||    
T  1260492 tttgaccatattttttaactaatatataaatacaattgttagcacgtaagatt 1260544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 196 - 244
Target Start/End: Complemental strand, 10298773 - 10298725
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||| ||||| ||||| |||||||||||||| |||||||||||    
T  10298773 tttgaccatattttttcactaatatataaatacaaatgttagcatgtaa 10298725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 23158109 - 23158058
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||| | ||||||||||| |||||||||||||| ||| ||||||||||    
T  23158109 tttgaccacattttttaactaatatataaatacaaatgttaacatgtaagat 23158058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 150 - 247
Target Start/End: Complemental strand, 20437260 - 20437162
Alignment:
Q  150 aaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||| |||| ||||| ||||||  ||||||||||||||| | ||||||||||    
T  20437260 aaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgatcatatttttttaactaatgtataaatacaaatatcaacatgtaagat 20437162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 67; Significance: 7e-30; HSPs: 36)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 21797567 - 21797669
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||||||||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  21797567 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgatttattttgaccatactttttaactaatgtataaatacaaatattagcatgtaa 21797666  T
Q  245 gat 247  Q
    |||    
T  21797667 gat 21797669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 42490459 - 42490345
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  42490459 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 42490360  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  42490359 attagcatgtaagat 42490345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 13499597 - 13499484
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  13499597 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 13499498  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  13499497 ttagcatgtaagat 13499484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 27010737 - 27010623
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||| ||||||||||||| ||||||||||||||    
T  27010737 atactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccaaactttttaactaatatataaatacaaat 27010638  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  27010637 attagcatgtaagat 27010623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 39866404 - 39866290
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  39866404 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaat 39866305  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  39866304 attagcatgtaagat 39866290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 42761745 - 42761632
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||||||||||||| ||  |||||| |||| | |||||||||  ||| ||| |||||||||||||||||||||| |||||||||||||||    
T  42761745 tactccctccgtttcaaaatacatgtccaatttttacaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaata 42761646  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  42761645 ttagcatgtaagat 42761632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 27334982 - 27334880
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| |   ||||||||||| | |||||||||  ||| ||| |||||||||||||||||||||| ||||||||||||||||||||||||||    
T  27334982 tttcaaaatacatgttcaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatatataaatacaaatattagcatgtaa 27334883  T
Q  245 gat 247  Q
    |||    
T  27334882 gat 27334880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 33415798 - 33415912
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||||||| | |  |||| || ||| ||| |||||||||||||||||||||| ||||||||||||||    
T  33415798 atactccctctgtttcaaaatacatgtccaatttttgcaatgtgcgttatttatttgacttactttgaccatactttttaactaatatataaatacaaat 33415897  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  33415898 attagcatgtaagat 33415912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 172 - 247
Target Start/End: Original strand, 30213842 - 30213917
Alignment:
Q  172 atatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| |||||||||  ||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  30213842 atatgcactattcacttgacttattttgaccatactttttaactaatatataaatacaaatattagcatgtaagat 30213917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 247
Target Start/End: Original strand, 20765195 - 20765309
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||| ||||||||| ||  ||||||||||| | |||||||||  ||| ||| |||||| ||||||||||||||| ||||||||||||||    
T  20765195 atactccctccgttttaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgactatactttttaactaatatataaatacaaat 20765294  T
Q  233 attagcatgtaagat 247  Q
    |||| ||||||||||    
T  20765295 attaacatgtaagat 20765309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 44561795 - 44561897
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| | | || |||||||| | ||||||||| |||| ||| ||||||||||||||||||||||||||||||||||||| ||  |||||||    
T  44561795 tttcaaaatacatgttgcatgtttgcaatgtgcactattcacatgacttactttgaccatactttttaactaacatataaatacaaatgttgacatgtaa 44561894  T
Q  245 gat 247  Q
    |||    
T  44561895 gat 44561897  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 54507652 - 54507754
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||||| |||||||||  ||| |||||||||  |||||||||||||||  |||||||||| ||||||||||||||    
T  54507652 tttcaaaatacatatccaatttttgcaatatgcactattcacttgacttattttgattatactttttaactaatgtataaatacagatattagcatgtaa 54507751  T
Q  245 gat 247  Q
    |||    
T  54507752 gat 54507754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 52; E-Value: 7e-21
Query Start/End: Original strand, 164 - 247
Target Start/End: Original strand, 38137854 - 38137937
Alignment:
Q  164 tttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| | ||||||||   |||||||||||||||||| |||||||||||  ||||||||||||||||||||||||||||    
T  38137854 tttttgcaatctgcactattcgcttgatttattttgaccatattttttaactaatgtataaatacaaatattagcatgtaagat 38137937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 34912393 - 34912291
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||||||||||||  |||||    
T  34912393 tttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatacaaatattagattgtaa 34912294  T
Q  245 gat 247  Q
    |||    
T  34912293 gat 34912291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 247
Target Start/End: Original strand, 21005289 - 21005406
Alignment:
Q  130 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 229  Q
    |||||||||||||  ||||||||||||| |   ||||||||||  | |||||||||  | | ||| |||||||||||||||||| ||| ||||||||| |    
T  21005289 aatatactccctccgtttcaaaatacatgttcaatttttgcaacgtgcactattcacttcacttactttgaccatactttttaattaatatataaatata 21005388  T
Q  230 aatattagcatgtaagat 247  Q
    ||||||||||||||||||    
T  21005389 aatattagcatgtaagat 21005406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 139 - 247
Target Start/End: Original strand, 33803526 - 33803635
Alignment:
Q  139 cctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatac-tttttaactaacatataaatacaaatattag 237  Q
    |||| |||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||| |||||||||||  |||||||| |||||||||    
T  33803526 cctctatttcaaaatacatgtctaatttttgcaatgtgcactattcacttgacttactttgaccatacttttttaactaatgtataaatataaatattag 33803625  T
Q  238 catgtaagat 247  Q
    | ||||||||    
T  33803626 cttgtaagat 33803635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 52167255 - 52167322
Alignment:
Q  180 tattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||||| || ||||||||||||||||||| ||| ||||||||||||||||||  |||||||||    
T  52167255 tattcatatgacttcttttgaccatactttttaattaatatataaatacaaatattaatatgtaagat 52167322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 6910345 - 6910447
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  | |||| |||| |||||||||||  ||| ||| ||| |||||| |||||||||||  ||||||||||||||||| |||||||    
T  6910345 tttcaaaatacatgtccaacttttacaatgtacactattcacttgacttactttaaccatattttttaactaatgtataaatacaaatattaacatgtaa 6910444  T
Q  245 gat 247  Q
    |||    
T  6910445 gat 6910447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 227
Target Start/End: Original strand, 19823900 - 19823993
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaata 227  Q
    |||||||||  ||||||||||||| ||  ||||||||||| | |||||||||  ||| ||| ||||||||||||||||||||||  ||||||||    
T  19823900 tactccctccgtttcaaaatacatgtccaatttttgcaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaata 19823993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 134 - 247
Target Start/End: Complemental strand, 48334782 - 48334670
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    |||||||||  ||| ||||||||| ||||| |||| |||| |||| |||||| ||  |||| ||| |||||  ||||||||||  |||||||||||||||    
T  48334782 tactccctccgttttaaaatacatctcgtaattttacaatgtacattattcacatagtttactttaaccattttttttaactat-atataaatacaaata 48334684  T
Q  234 ttagcatgtaagat 247  Q
    ||||||||||||||    
T  48334683 ttagcatgtaagat 48334670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 163 - 247
Target Start/End: Original strand, 36227574 - 36227658
Alignment:
Q  163 atttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||   |||||||||| ||| ||| |||||||||| |||| || |||  ||||||||||||||||||||||||||||    
T  36227574 atttttgcaatgcgcactattcatttgacttactttgaccatatttttcaattaatgtataaatacaaatattagcatgtaagat 36227658  T

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Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 41253014 - 41252912
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||| || ||| | |||| |||| | ||||||||||||   ||| ||| |||||| ||||||||||| |||||||||||||| ||||||| |||    
T  41253014 tttcaaaatatatgtcgcaattttacaatgtgcactattcatatagcttactttaaccatattttttaactaatatataaatacaaatgttagcatataa 41252915  T
Q  245 gat 247  Q
    |||    
T  41252914 gat 41252912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 203 - 247
Target Start/End: Original strand, 44856415 - 44856459
Alignment:
Q  203 atactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||||||||||||||||||||||| |||| |||||||||    
T  44856415 atactttttaactaacatataaatacaaatgttagtatgtaagat 44856459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 244
Target Start/End: Complemental strand, 3430493 - 3430426
Alignment:
Q  177 cactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||| |||| | ||| |||||||||| ||||||||||| |||| |||| ||||||||||||||||    
T  3430493 cactatttatataacttactttgaccatattttttaactaatatattaataaaaatattagcatgtaa 3430426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 15333006 - 15332955
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||| | ||||||||||| |||||||||||||| ||||||||||||||    
T  15333006 tttgaccaaattttttaactaatatataaatacaaatgttagcatgtaagat 15332955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 180 - 247
Target Start/End: Original strand, 25527450 - 25527517
Alignment:
Q  180 tattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||| |||| ||| || ||||||| ||||||||| | |||||||||||||||||| ||||||||||    
T  25527450 tattcacatgacttacttcgaccatattttttaactgatatataaatacaaatattaacatgtaagat 25527517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 192 - 247
Target Start/End: Complemental strand, 33128123 - 33128068
Alignment:
Q  192 ttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||||| |||||||||||||||| | ||||||| |||||||| ||||||||||    
T  33128123 ttattttgatcatactttttaactaatacataaatataaatattaacatgtaagat 33128068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 177 - 247
Target Start/End: Complemental strand, 43181575 - 43181504
Alignment:
Q  177 cactattcatatgatttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||  ||||||| |||||||||||||||| ||||||  |||||||| ||||||||| |||||||||    
T  43181575 cactattcacttgatttactttgaccatacttttttaactaatgtataaatataaatattagtatgtaagat 43181504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 43467993 - 43467891
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    |||||||||||||  |  ||||||||||| |  ||||||||  ||| ||| |||||||||||||||||||| |  ||||||| | |||||||||| ||||    
T  43467993 tttcaaaatacatgaccaatttttgcaatgtgtactattcacttgacttactttgaccatactttttaactgatgtataaattctaatattagcaggtaa 43467894  T
Q  245 gat 247  Q
    |||    
T  43467893 gat 43467891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 192 - 239
Target Start/End: Complemental strand, 27813492 - 27813445
Alignment:
Q  192 ttattttgaccatactttttaactaacatataaatacaaatattagca 239  Q
    |||||||||| ||| ||||||||||| |||||||||||||| ||||||    
T  27813492 ttattttgactatattttttaactaatatataaatacaaatgttagca 27813445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 245
Target Start/End: Original strand, 3017852 - 3017902
Alignment:
Q  195 ttttgaccatactttttaactaacatataaatacaaatattagcatgtaag 245  Q
    ||||||||||| ||||||||||  |||||||||||||| ||||||| ||||    
T  3017852 ttttgaccatattttttaactattatataaatacaaatgttagcatataag 3017902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 198 - 247
Target Start/End: Original strand, 17643795 - 17643844
Alignment:
Q  198 tgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| ||| ||||||||||| || ||||||||||| ||||||||||||||    
T  17643795 tgactatattttttaactaatatgtaaatacaaatgttagcatgtaagat 17643844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 190 - 246
Target Start/End: Complemental strand, 23224363 - 23224306
Alignment:
Q  190 atttattttgaccatacttttt-aactaacatataaatacaaatattagcatgtaaga 246  Q
    ||||| |||||| ||||||||| |||||| |||||||| |||||||||| ||||||||    
T  23224363 atttactttgactatacttttttaactaatatataaatgcaaatattagaatgtaaga 23224306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 182 - 247
Target Start/End: Complemental strand, 23940576 - 23940511
Alignment:
Q  182 ttcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    ||||||| |||||  |||||| || ||||||||||| ||||||||| |||| ||| ||||||||||    
T  23940576 ttcatataatttacattgaccttattttttaactaatatataaataaaaatgttaacatgtaagat 23940511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 191 - 247
Target Start/End: Complemental strand, 15568140 - 15568084
Alignment:
Q  191 tttattttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| ||||| |||| ||||||||||| |||||||||||||| ||| | ||||||||    
T  15568140 tttaatttgatcatattttttaactaatatataaatacaaatgttaccgtgtaagat 15568084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 196 - 240
Target Start/End: Complemental strand, 41751610 - 41751566
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcat 240  Q
    ||||| |||| ||||||||||| |||||||||||||| |||||||    
T  41751610 tttgatcatattttttaactaatatataaatacaaatgttagcat 41751566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0056 (Bit Score: 62; Significance: 7e-27; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 134 - 247
Target Start/End: Original strand, 70961 - 71073
Alignment:
Q  134 tactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaata 233  Q
    ||||||||| |||||||||||||| ||  ||||||||||||| |||||||||  ||| |||||||||||||| |||||||||||  ||||||||||||||    
T  70961 tactccctccatttcaaaatacatgtccaatttttgcaatatgcactattcacttgacttattttgaccata-tttttaactaatgtataaatacaaata 71059  T
Q  234 ttagcatgtaagat 247  Q
    ||||||| ||||||    
T  71060 ttagcatttaagat 71073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 68020 - 67918
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||||||||||| ||  ||||||| ||| | |||||||||| ||| ||| ||||||||||||||||||||||  ||||||||||||||||| |||||||    
T  68020 tttcaaaatacatgtccaatttttgaaatgtgcactattcatttgacttactttgaccatactttttaactaatgtataaatacaaatattaacatgtaa 67921  T
Q  245 gat 247  Q
    |||    
T  67920 gat 67918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 162100 - 161986
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||||||||||||| ||  ||||||| ||| | |||||||||  ||| |||  |||||||||||||||||||||  |||||||||||||    
T  162100 atactccctccgtttcaaaatacatgtctaatttttgtaatgtgcactattcacttgacttacattgaccatactttttaactaatgtataaatacaaat 162001  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  162000 attagcatgtaagat 161986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 130 - 247
Target Start/End: Complemental strand, 100913 - 100796
Alignment:
Q  130 aatatactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaataca 229  Q
    |||||||||||||  ||||||||||||| |   | ||||||||| | |||||||||  ||| ||| |||||||||| |||||||||||  ||||||||||    
T  100913 aatatactccctccgtttcaaaatacatgttcaacttttgcaatgtgcactattcacttgacttactttgaccataatttttaactaatgtataaataca 100814  T
Q  230 aatattagcatgtaagat 247  Q
    ||||||||| ||||||||    
T  100813 aatattagcgtgtaagat 100796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0295 (Bit Score: 47; Significance: 6e-18; HSPs: 1)
Name: scaffold0295
Description:

Target: scaffold0295; HSP #1
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 133 - 247
Target Start/End: Complemental strand, 13980 - 13866
Alignment:
Q  133 atactccctcgatttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaat 232  Q
    ||||||||||  ||| ||||||||| ||  || |||| ||| | |||||||||  ||| ||| ||||||||||||||||||||||  |||||||| ||||    
T  13980 atactccctccgttttaaaatacatgtctaatatttgtaatgtgcactattcacttgacttactttgaccatactttttaactaatgtataaatataaat 13881  T
Q  233 attagcatgtaagat 247  Q
    |||||||||||||||    
T  13880 attagcatgtaagat 13866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0262 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0262
Description:

Target: scaffold0262; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Original strand, 22791 - 22893
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||| ||||||||||  | |||| |||||| || |||||| || | |||||||||||| | ||||||||| | |||||||||||||| |||||||||||    
T  22791 tttcataatacatttcacaattttacaatatgcattattcacataacttattttgaccacattttttaactcatatataaatacaaatgttagcatgtaa 22890  T
Q  245 gat 247  Q
    |||    
T  22891 gat 22893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0225 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0225
Description:

Target: scaffold0225; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 9084 - 8982
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||| ||||||||||  | |||| |||||| || |||||| || | ||| |||||||| | ||||||||||| |||||||||||||| |||||||||||    
T  9084 tttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaa 8985  T
Q  245 gat 247  Q
    |||    
T  8984 gat 8982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 145 - 247
Target Start/End: Complemental strand, 138281 - 138179
Alignment:
Q  145 tttcaaaatacatttcgtatttttgcaatatacactattcatatgatttattttgaccatactttttaactaacatataaatacaaatattagcatgtaa 244  Q
    ||||| ||||||||||  | |||| |||||| || |||||| || | ||| |||||||| | ||||||||||| |||||||||||||| |||||||||||    
T  138281 tttcataatacatttcacaattttacaatatgcattattcacataacttactttgaccacattttttaactaatatataaatacaaatgttagcatgtaa 138182  T
Q  245 gat 247  Q
    |||    
T  138181 gat 138179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0595 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0595
Description:

Target: scaffold0595; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 196 - 248
Target Start/End: Original strand, 4010 - 4062
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagatt 248  Q
    |||||||||| ||||||||||| |||||||||||||| |||||||||||||||    
T  4010 tttgaccatattttttaactaatatataaatacaaatgttagcatgtaagatt 4062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0099 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 196 - 247
Target Start/End: Complemental strand, 28852 - 28801
Alignment:
Q  196 tttgaccatactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||||||||| |||||||||||  ||||||||||||||||||||| ||||||    
T  28852 tttgaccatattttttaactaatttataaatacaaatattagcatataagat 28801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0608 (Bit Score: 30; Significance: 0.00000009; HSPs: 1)
Name: scaffold0608
Description:

Target: scaffold0608; HSP #1
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 202 - 247
Target Start/End: Original strand, 1588 - 1633
Alignment:
Q  202 catactttttaactaacatataaatacaaatattagcatgtaagat 247  Q
    |||| ||||||| |||  ||||||||||||||||||||||||||||    
T  1588 catattttttaattaatgtataaatacaaatattagcatgtaagat 1633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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