View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20822_low_19 (Length: 249)
Name: NF20822_low_19
Description: NF20822
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20822_low_19 |
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Alignment Details
Target: chr4 (Bit Score: 231; Significance: 1e-127; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 1 - 235
Target Start/End: Original strand, 41289133 - 41289367
Alignment:
| Q |
1 |
agtcccagttgagagagatgtccacatttagtgagagtttctcgaataaaattacaactattgaagagggaacctatgagaaaccaaaagaaaaagttgt |
100 |
Q |
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| T |
41289133 |
agtcccagttgagagagatgtccacatttagtgagagtttctcgaataaaattacaactattgaagagggaacctatgagaaaccaaaagaaaaagttgt |
41289232 |
T |
|
| Q |
101 |
tcgactctataactttagggactaaattagcgattcactgtgtatagttgggtatattttagacagttgactgaaattgcataattgaccagtttctgcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |
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| T |
41289233 |
tcgactctataactttagggactaaattagcgattcactgtgtatagttgggtatattttagacagttgattgaaattgcataattgaccagtttctgcg |
41289332 |
T |
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| Q |
201 |
tgtgtgaattattttggaagctggcatatactgat |
235 |
Q |
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||||||||||||||||||||||||||||||||||| |
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| T |
41289333 |
tgtgtgaattattttggaagctggcatatactgat |
41289367 |
T |
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