View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20824_high_10 (Length: 348)

Name: NF20824_high_10
Description: NF20824
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20824_high_10
NF20824_high_10
[»] chr7 (25 HSPs)
chr7 (68-324)||(18873164-18873420)
chr7 (73-324)||(15167979-15168230)
chr7 (77-324)||(10895795-10896042)
chr7 (69-324)||(14422789-14423043)
chr7 (62-324)||(12709833-12710095)
chr7 (62-324)||(13122904-13123166)
chr7 (73-324)||(16009382-16009631)
chr7 (62-312)||(13743526-13743774)
chr7 (62-281)||(12590633-12590850)
chr7 (62-281)||(13007281-13007497)
chr7 (75-269)||(16677152-16677348)
chr7 (75-269)||(17651388-17651584)
chr7 (36-128)||(21230923-21231015)
chr7 (49-128)||(20311026-20311107)
chr7 (73-128)||(11382871-11382926)
chr7 (73-128)||(11389348-11389403)
chr7 (36-128)||(148619-148711)
chr7 (73-192)||(13679428-13679548)
chr7 (72-127)||(2971254-2971309)
chr7 (72-127)||(20906461-20906516)
chr7 (73-127)||(11311059-11311113)
chr7 (67-108)||(831628-831669)
chr7 (67-108)||(1196808-1196849)
chr7 (67-108)||(34958578-34958619)
chr7 (73-129)||(46625961-46626017)
[»] chr5 (15 HSPs)
chr5 (68-324)||(22750945-22751201)
chr5 (36-324)||(38144500-38144786)
chr5 (73-324)||(28370055-28370304)
chr5 (73-324)||(19512191-19512441)
chr5 (68-281)||(23528479-23528690)
chr5 (49-128)||(22438723-22438803)
chr5 (36-128)||(42961566-42961658)
chr5 (73-137)||(18407944-18408008)
chr5 (73-137)||(23111200-23111264)
chr5 (36-88)||(1856445-1856497)
chr5 (36-88)||(21674415-21674467)
chr5 (72-127)||(19236900-19236955)
chr5 (61-187)||(34830024-34830150)
chr5 (72-125)||(22461158-22461211)
chr5 (72-125)||(22467782-22467835)
[»] chr3 (24 HSPs)
chr3 (73-324)||(14762758-14763009)
chr3 (75-322)||(38310802-38311049)
chr3 (75-305)||(20247791-20248021)
chr3 (75-312)||(24192771-24193009)
chr3 (73-324)||(9534133-9534382)
chr3 (72-324)||(23370505-23370756)
chr3 (75-324)||(55499104-55499353)
chr3 (72-324)||(24933828-24934077)
chr3 (49-241)||(16801444-16801635)
chr3 (62-281)||(41455087-41455304)
chr3 (73-134)||(18929239-18929300)
chr3 (73-137)||(17240513-17240577)
chr3 (36-88)||(24122221-24122273)
chr3 (36-88)||(13967762-13967814)
chr3 (36-88)||(13973237-13973289)
chr3 (72-127)||(13302240-13302295)
chr3 (72-127)||(13323787-13323842)
chr3 (72-186)||(10389443-10389557)
chr3 (72-186)||(10414532-10414646)
chr3 (72-186)||(10421202-10421316)
chr3 (72-127)||(12033444-12033499)
chr3 (72-127)||(13312896-13312951)
chr3 (72-127)||(17131732-17131787)
chr3 (72-127)||(51301589-51301644)
[»] scaffold0026 (2 HSPs)
scaffold0026 (56-324)||(11834-12102)
scaffold0026 (72-324)||(111491-111741)
[»] chr6 (24 HSPs)
chr6 (73-306)||(23057760-23057993)
chr6 (62-324)||(29614136-29614398)
chr6 (73-324)||(23839003-23839253)
chr6 (36-324)||(18800242-18800529)
chr6 (62-324)||(10986170-10986431)
chr6 (73-308)||(4477678-4477912)
chr6 (62-207)||(930085-930229)
chr6 (75-324)||(21565214-21565462)
chr6 (62-281)||(12168212-12168428)
chr6 (62-281)||(19287121-19287337)
chr6 (62-281)||(19785859-19786075)
chr6 (62-281)||(19878305-19878521)
chr6 (62-281)||(19884081-19884297)
chr6 (72-186)||(34639986-34640100)
chr6 (72-186)||(34646660-34646774)
chr6 (36-128)||(24512807-24512899)
chr6 (72-186)||(25469704-25469816)
chr6 (73-129)||(25397172-25397228)
chr6 (73-125)||(9187498-9187550)
chr6 (73-129)||(19471335-19471391)
chr6 (73-129)||(25348486-25348542)
chr6 (72-156)||(31252394-31252478)
chr6 (75-129)||(25598643-25598697)
chr6 (36-87)||(933615-933666)
[»] scaffold1773 (1 HSPs)
scaffold1773 (65-324)||(983-1240)
[»] scaffold0006 (1 HSPs)
scaffold0006 (65-324)||(49984-50241)
[»] chr4 (13 HSPs)
chr4 (62-324)||(8045822-8046083)
chr4 (62-327)||(11847908-11848179)
chr4 (72-186)||(53483646-53483760)
chr4 (36-128)||(15408139-15408231)
chr4 (73-129)||(8834895-8834951)
chr4 (73-129)||(13888641-13888697)
chr4 (72-210)||(27906182-27906321)
chr4 (75-156)||(14486632-14486713)
chr4 (73-129)||(15245215-15245271)
chr4 (78-129)||(22724691-22724742)
chr4 (36-87)||(43284008-43284059)
chr4 (67-108)||(15747551-15747592)
chr4 (73-129)||(15308120-15308176)
[»] scaffold0029 (1 HSPs)
scaffold0029 (62-281)||(111728-111948)
[»] scaffold0924 (1 HSPs)
scaffold0924 (62-324)||(740-1002)
[»] chr2 (17 HSPs)
chr2 (73-324)||(19661454-19661703)
chr2 (73-324)||(6483523-6483772)
chr2 (73-324)||(6486990-6487239)
chr2 (62-269)||(26583687-26583892)
chr2 (75-324)||(23089057-23089305)
chr2 (75-324)||(23878813-23879060)
chr2 (73-324)||(23101463-23101713)
chr2 (72-326)||(5706023-5706274)
chr2 (36-87)||(6260135-6260186)
chr2 (73-137)||(23265133-23265197)
chr2 (73-137)||(23280201-23280265)
chr2 (73-134)||(21908353-21908414)
chr2 (36-80)||(19665037-19665081)
chr2 (73-129)||(24661576-24661632)
chr2 (72-127)||(10577-10632)
chr2 (72-127)||(25180929-25180984)
chr2 (63-144)||(26885166-26885246)
[»] scaffold0025 (1 HSPs)
scaffold0025 (75-312)||(14398-14635)
[»] chr8 (17 HSPs)
chr8 (75-324)||(8727735-8727984)
chr8 (62-324)||(23866418-23866680)
chr8 (72-324)||(44477428-44477678)
chr8 (72-324)||(44492586-44492836)
chr8 (36-324)||(27940815-27941104)
chr8 (62-281)||(17054440-17054656)
chr8 (73-182)||(18614217-18614327)
chr8 (36-128)||(14056527-14056619)
chr8 (73-137)||(23482053-23482117)
chr8 (40-128)||(25111976-25112064)
chr8 (36-88)||(30765873-30765925)
chr8 (73-129)||(39364919-39364975)
chr8 (73-127)||(29643386-29643440)
chr8 (72-127)||(24320670-24320725)
chr8 (37-97)||(21325730-21325791)
chr8 (37-96)||(21321132-21321192)
chr8 (73-129)||(21931696-21931752)
[»] scaffold0247 (1 HSPs)
scaffold0247 (36-324)||(11146-11433)
[»] chr1 (12 HSPs)
chr1 (73-324)||(20437024-20437274)
chr1 (62-281)||(41111884-41112100)
chr1 (73-137)||(32651563-32651627)
chr1 (73-128)||(19663517-19663572)
chr1 (73-137)||(18712790-18712854)
chr1 (73-129)||(20805320-20805376)
chr1 (73-128)||(11158093-11158148)
chr1 (75-129)||(10811785-10811839)
chr1 (72-127)||(20851132-20851187)
chr1 (72-127)||(20857759-20857814)
chr1 (72-127)||(21706276-21706331)
chr1 (72-127)||(21710818-21710873)
[»] scaffold0553 (1 HSPs)
scaffold0553 (72-324)||(10195-10446)
[»] scaffold0544 (1 HSPs)
scaffold0544 (72-324)||(1525-1776)
[»] scaffold0090 (1 HSPs)
scaffold0090 (36-324)||(17973-18261)
[»] scaffold0117 (2 HSPs)
scaffold0117 (62-324)||(1887-2148)
scaffold0117 (62-324)||(8564-8825)
[»] scaffold0058 (1 HSPs)
scaffold0058 (62-312)||(109-356)
[»] scaffold0154 (1 HSPs)
scaffold0154 (36-269)||(30715-30949)
[»] scaffold0476 (1 HSPs)
scaffold0476 (75-324)||(3295-3544)
[»] scaffold0077 (1 HSPs)
scaffold0077 (75-324)||(3624-3872)
[»] scaffold0796 (2 HSPs)
scaffold0796 (67-263)||(1727-1920)
scaffold0796 (67-263)||(5750-5943)
[»] scaffold0456 (4 HSPs)
scaffold0456 (68-155)||(904-991)
scaffold0456 (68-155)||(8049-8136)
scaffold0456 (217-312)||(806-900)
scaffold0456 (217-312)||(7951-8045)
[»] scaffold0634 (1 HSPs)
scaffold0634 (232-324)||(3466-3558)
[»] scaffold0107 (1 HSPs)
scaffold0107 (36-128)||(40495-40587)
[»] scaffold0129 (1 HSPs)
scaffold0129 (66-184)||(45268-45386)
[»] scaffold0019 (1 HSPs)
scaffold0019 (39-128)||(135473-135562)
[»] scaffold0235 (1 HSPs)
scaffold0235 (36-126)||(22556-22646)
[»] scaffold0310 (1 HSPs)
scaffold0310 (49-128)||(17643-17723)
[»] scaffold0222 (1 HSPs)
scaffold0222 (73-137)||(16811-16875)
[»] scaffold0004 (1 HSPs)
scaffold0004 (73-137)||(116887-116951)
[»] scaffold0124 (1 HSPs)
scaffold0124 (73-128)||(34276-34331)
[»] scaffold0461 (1 HSPs)
scaffold0461 (73-137)||(8-72)
[»] scaffold0249 (1 HSPs)
scaffold0249 (36-80)||(2212-2256)
[»] scaffold0146 (1 HSPs)
scaffold0146 (73-137)||(13623-13687)
[»] scaffold0020 (1 HSPs)
scaffold0020 (73-137)||(101928-101992)
[»] scaffold0815 (1 HSPs)
scaffold0815 (62-124)||(1453-1515)
[»] scaffold2054 (1 HSPs)
scaffold2054 (62-161)||(680-780)
[»] scaffold0609 (1 HSPs)
scaffold0609 (72-156)||(5857-5941)
[»] scaffold0317 (1 HSPs)
scaffold0317 (73-192)||(1321-1441)
[»] scaffold0138 (1 HSPs)
scaffold0138 (73-129)||(12296-12352)
[»] scaffold0139 (1 HSPs)
scaffold0139 (73-128)||(14997-15052)
[»] scaffold0790 (1 HSPs)
scaffold0790 (61-94)||(5487-5520)
[»] scaffold0261 (1 HSPs)
scaffold0261 (62-262)||(23559-23760)
[»] scaffold0001 (1 HSPs)
scaffold0001 (63-144)||(493019-493099)
[»] scaffold0348 (2 HSPs)
scaffold0348 (39-87)||(14620-14668)
scaffold0348 (72-127)||(9336-9391)
[»] scaffold0096 (1 HSPs)
scaffold0096 (69-129)||(39503-39563)
[»] scaffold0127 (1 HSPs)
scaffold0127 (72-127)||(10239-10294)
[»] scaffold0023 (1 HSPs)
scaffold0023 (72-127)||(135438-135493)
[»] scaffold1318 (1 HSPs)
scaffold1318 (73-127)||(1913-1967)
[»] scaffold0034 (1 HSPs)
scaffold0034 (75-187)||(73224-73337)
[»] scaffold0453 (1 HSPs)
scaffold0453 (72-156)||(10550-10634)
[»] scaffold0335 (1 HSPs)
scaffold0335 (73-129)||(2628-2684)


Alignment Details
Target: chr7 (Bit Score: 225; Significance: 1e-124; HSPs: 25)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 68 - 324
Target Start/End: Complemental strand, 18873420 - 18873164
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 167  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18873420 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 18873321  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  18873320 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 18873221  T
Q  268 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  18873220 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 18873164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 15168230 - 15167979
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  15168230 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 15168131  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  15168130 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 15168031  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  15168030 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 15167979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 77 - 324
Target Start/End: Original strand, 10895795 - 10896042
Alignment:
Q  77 gtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttgat 175  Q
    ||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||    
T  10895795 gtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtttgat 10895894  T
Q  176 gatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaatt 275  Q
    ||||||||||| ||||| |||||| | |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||    
T  10895895 gatgattctgaggggaa-tgggtattgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaatt 10895993  T
Q  276 gattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  10895994 gattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 10896042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 69 - 324
Target Start/End: Complemental strand, 14423043 - 14422789
Alignment:
Q  69 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttag 167  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  14423043 aaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttag 14422944  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    |||||||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||| ||||||    
T  14422943 ggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgat 14422845  T
Q  268 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  14422844 cataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 14422789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 12709833 - 12710095
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  12709833 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 12709931  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattc-cgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||   |||||||||||||||||||||  ||||||||||| ||||||||    
T  12709932 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 12710030  T
Q  261 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  12710031 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12710095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 13122904 - 13123166
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13122904 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13123002  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattc-cgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||   |||||||||||||||||||||  ||||||||||| ||||||||    
T  13123003 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 13123101  T
Q  261 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  13123102 ctgtgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 13123166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 16009631 - 16009382
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||| |||||    
T  16009631 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatggttttggaagataaattgtgggttaaggttt 16009532  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  16009531 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 16009433  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    | ||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  16009432 actgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 16009382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 62 - 312
Target Start/End: Complemental strand, 13743774 - 13743526
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  13743774 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 13743676  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    ||||||||||||||||||||| ||||| |||||||||||| ||||||||||||   ||||| |||  |||||||| |||| |||||||||||||| ||||    
T  13743675 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattttcttgtattatgctgttcagattgaagacttaatctatgttattgc 13743576  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 312  Q
    ||||||||||||||| |||| |||||||   | |||||| |||||||||||    
T  13743575 tgtgatcataaattggttga-aattatgcttggttggataaattgatgaat 13743526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 12590633 - 12590850
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12590633 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaa 12590731  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| ||   ||| ||| ||||||| ||||||||| ||||||| ||||||||||    
T  12590732 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttggaatttaatgttaagaatgaaagcttaatccatgttgttgc 12590829  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  12590830 tgtaatccattaattgattga 12590850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 13007497 - 13007281
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  13007497 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 13007399  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  13007398 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 13007302  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  13007301 tgtaatccatgaattgattga 13007281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 75 - 269
Target Start/End: Complemental strand, 16677348 - 16677152
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 172  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  16677348 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 16677249  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 269  Q
    |||||||||| ||| | | |  | ||||| |||||||||| |  |||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  16677248 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 16677152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 75 - 269
Target Start/End: Complemental strand, 17651584 - 17651388
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagat-aaattgagggttagggttt 172  Q
    ||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||| ||||| |||||||||||||    
T  17651584 aggtaagggtgagactatctctcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaaattaagggttagggttt 17651485  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatca 269  Q
    |||||||||| ||| | | |  | ||||| |||||||||| |  |||||||  | ||||||||||||||  | ||||||||  ||||||||||||||    
T  17651484 gatgatgattttgaggaggatggtgtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgctgtgatca 17651388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 21230923 - 21231015
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  21230923 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 21231015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 20311026 - 20311107
Alignment:
Q  49 tgctgtgtaatcattctgcaaaa--ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||| |||| ||||||||||  |||||||||||||||||||||||||| ||||||||||  ||||||||||||||||||    
T  20311026 tgctgtgcaatctttctgcaaaaatctaaggtaagggtgagactatctctcaataatcataacgtataatttctgaaaattg 20311107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11382871 - 11382926
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11382871 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11382926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 11389348 - 11389403
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  11389348 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattg 11389403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 148711 - 148619
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||| ||||||| |||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| |||  |||||||||||||    
T  148711 taggaactgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatggtttctgaaaattg 148619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 13679548 - 13679428
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 171  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  13679548 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 13679449  T
Q  172 tgatgatgattctgaagggaa 192  Q
    ||||| ||||| |||| ||||    
T  13679448 tgatgctgattttgaaaggaa 13679428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 2971309 - 2971254
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  2971309 ctaaggtaagggtgggattatctttcaatagtcataatttataatttctgaaaatt 2971254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 20906461 - 20906516
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20906461 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20906516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Complemental strand, 11311113 - 11311059
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||| ||||||    
T  11311113 taaggtaagggtgagactatctctcaataataatagtgtagaatttctaaaaatt 11311059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 831628 - 831669
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  831628 caaaactaaggtaagggtgagactaactctcaataattataa 831669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 1196808 - 1196849
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  1196808 caaaactaaggtaagggtgagactaactctcaataattataa 1196849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Complemental strand, 34958619 - 34958578
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  34958619 caaaactaaggtaagggtgagactaactctcaataattataa 34958578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 46626017 - 46625961
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||| |||||||||||||| ||||| || || ||||| ||||||||| |||||||||    
T  46626017 taagataagggtgagactaactctcaatgattataatatataatttcggaaaattga 46625961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 68 - 324
Target Start/End: Complemental strand, 22751201 - 22750945
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 167  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  22751201 aaaactaaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 22751102  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  22751101 ggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgat 22751002  T
Q  268 cataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  22751001 cataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 22750945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 197; E-Value: 1e-107
Query Start/End: Original strand, 36 - 324
Target Start/End: Original strand, 38144500 - 38144786
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  38144500 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 38144599  T
Q  136 tgcatagttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcag 235  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||| |||| |||||||| | |||||||||||||  ||||||| ||||||| ||    
T  38144600 tgcataattttggaaaataaattgagggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctattgtaatgtaatgtttag 38144698  T
Q  236 aatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||||||||||  ||||| |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||    
T  38144699 aatgaaaacttaatctatactgttgttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatg 38144786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 73 - 324
Target Start/End: Original strand, 28370055 - 28370304
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  28370055 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 28370154  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||| || |||| |||||||| | ||||||||||||| |||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  28370155 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 28370253  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  28370254 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 28370304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 19512441 - 19512191
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  19512441 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 19512342  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||| || |||| |||||||| | |||||||||||||  ||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  19512341 tgatgatgattttg-aggggaatgggtattgatcatgttaattctattgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 19512243  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  19512242 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 19512191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 68 - 281
Target Start/End: Complemental strand, 23528690 - 23528479
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttag 167  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||  |||||    
T  23528690 aaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaaagttag 23528592  T
Q  168 ggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat 267  Q
    ||||||||||||||||||| ||  |||| ||||  || |||||| ||   ||| ||| ||||||| |||| |||| ||||||| ||||||||||||| ||    
T  23528591 ggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttcttggaatttaatgttaagaacgaaatcttaatccatgttgttgctgtaat 23528494  T
Q  268 -cataaattgattga 281  Q
     ||| ||||||||||    
T  23528493 ccatgaattgattga 23528479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 49 - 128
Target Start/End: Original strand, 22438723 - 22438803
Alignment:
Q  49 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||    
T  22438723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataatcataatgtataatttctgaaaattg 22438803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 42961658 - 42961566
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    
T  42961658 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattg 42961566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 18407944 - 18408008
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| |||||||    
T  18407944 taaggtaagggtgagactatctctcaataatcataatatataatttctgaaaattgatctaattg 18408008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 23111200 - 23111264
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23111200 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23111264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 1856445 - 1856497
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 88  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  1856445 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 1856497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 21674415 - 21674467
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 88  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  21674415 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 21674467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 19236955 - 19236900
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  19236955 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 19236900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 34830150 - 34830024
Alignment:
Q  61 attctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattg 159  Q
    |||||||||  |||||||||||||| || ||||| || |||||  |||| ||||||||||||||||  | ||||| | |||||| | |||||| ||||||    
T  34830150 attctgcaattctaaggtaagggtgggattatctttcaataatt-taatgtataatttctgaaaatcaatctaatagaatagttcttgaagataaaattg 34830052  T
Q  160 agggttagggtttgatgatgattctgaa 187  Q
    ||  ||||||| ||||| ||||| ||||    
T  34830051 agaattagggtatgatgctgattttgaa 34830024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 22461211 - 22461158
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 125  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22461211 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22461158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 22467835 - 22467782
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 125  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||    
T  22467835 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaa 22467782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 224; Significance: 1e-123; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 73 - 324
Target Start/End: Original strand, 14762758 - 14763009
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  14762758 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 14762857  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  14762858 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 14762957  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  14762958 attgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 14763009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 75 - 322
Target Start/End: Original strand, 38310802 - 38311049
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 174  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  38310802 aggtaagggtgagactatctctcgataatcataatctataatttctgaatattgacctaattgcatagttttggaagataaattgagggttagggtttga 38310901  T
Q  175 tgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 274  Q
    ||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  38310902 tgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 38311001  T
Q  275 tgattgagaattatgagcgattggatgaattgatgaatttgtgtatga 322  Q
    ||||||| ||||||||| |||||||||||| |||||||||||||||||    
T  38311002 tgattgaaaattatgagtgattggatgaatggatgaatttgtgtatga 38311049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 195; E-Value: 1e-106
Query Start/End: Original strand, 75 - 305
Target Start/End: Original strand, 20247791 - 20248021
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 174  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20247791 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtttga 20247890  T
Q  175 tgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaat 274  Q
    ||||||||||||||||||||||||||| ||||||||||||   |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||    
T  20247891 tgatgattctgaagggaaatgggtaatgatcatgttaattttcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataaat 20247990  T
Q  275 tgattgagaattatgagcgattggatgaatt 305  Q
    ||||||| ||||||||| |||||||||||||    
T  20247991 tgattgaaaattatgagtgattggatgaatt 20248021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 75 - 312
Target Start/End: Complemental strand, 24193009 - 24192771
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 173  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  24193009 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 24192910  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtg-atcataa 272  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| | ||||||||||||||||||||||||||| |||||||||| |||||||    
T  24192909 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttcagaatgaaaacttaatctatgctgttgctgtgaatcataa 24192810  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaat 312  Q
    | ||||||| || |||||  |||||||| |||||||||||    
T  24192809 actgattga-aaatatgattgattggataaattgatgaat 24192771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 9534382 - 9534133
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  9534382 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 9534283  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||| || | |||||||| | ||||||||||||| |||||||| ||||||| ||||||||||||||||||||  |||||  ||||||||||    
T  9534282 gatgatgattctg-agtggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgtcgtgatcataa 9534184  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  9534183 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 9534133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 72 - 324
Target Start/End: Original strand, 23370505 - 23370756
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 170  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  23370505 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 23370604  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    ||||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  23370605 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 23370703  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  23370704 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 23370756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 55499104 - 55499353
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctg-aaaattgacctaattgcatagttttggaagataaa-ttgagggttagggtt 171  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| | ||||||||||||| ||| ||   ||| | |||||| |||||||||||||||    
T  55499104 aggtaagggtgagactatctctcattaatagataatatgtaatttcgggaaaattgacctaactgcttaaccttg-aggataaaattgagggttagggtt 55499202  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||||||| ||||| |||||||| ||||||||||||  |||||||| | |||||| |||||||| ||||||||||   |||||||||||||||    
T  55499203 tgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatacagttgctgtgatcata 55499301  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| || ||| |  |||||||||||||||| || || |||||||||    
T  55499302 aattgattga-aaatataattgattggatgaattgatcaagttttgtatgatg 55499353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 72 - 324
Target Start/End: Original strand, 24933828 - 24934077
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||   ||||||||    
T  24933828 ctaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataatatgaaaattagggtt 24933926  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-cat 270  Q
    ||||||||||||||| ||  |||| ||||  || |||||| ||   | | ||| ||||||| ||||||||| ||||||| ||||||||||||  || |||    
T  24933927 tgatgatgattctgatgg--aatgagtaaagatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgttgttgctgcaatccat 24934024  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
     |||||||||| | || |||   |||| |||||||||||||| | |||||||||    
T  24934025 taattgattga-atttttgatgtattgtatgaattgatgaatatttgtatgatg 24934077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 49 - 241
Target Start/End: Original strand, 16801444 - 16801635
Alignment:
Q  49 tgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg 148  Q
    |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||| || |||||||||||||||||||||| ||||| ||| ||| |    
T  16801444 tgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcat-atatataatttctgaaaattgacctgattgcttagcttttg 16801542  T
Q  149 aagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaa 241  Q
    ||||| ||||||| |||||||| |||||||||||| ||| | |||  | ||||| |||||||||| |  | |||||| | ||||| ||||||||    
T  16801543 aagataaaattgaaggttaggg-ttgatgatgattttgaggagaatggtgtaatgatcatgttaaatatgctgtaatgtgatgtttagaatgaa 16801635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 78; E-Value: 3e-36
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 41455087 - 41455304
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| |||   |||     
T  41455087 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataggatgaa 41455185  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
      |||||| |||||||||||||||| ||  |||| ||||  || |||||| ||   ||| ||| ||||||  ||||||||| ||||||| || | |||||    
T  41455186 aattagggattgatgatgattctgatgg--aatgagtaaagatgatgttagttttcttgaaatttaatgtcaagaatgaaatcttaatccatatggttgc 41455283  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  41455284 tgtaatccatgaattgattga 41455304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 18929300 - 18929239
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 134  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  18929300 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 18929239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 17240513 - 17240577
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  17240513 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 17240577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 24122221 - 24122273
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 88  Q
    ||||||||||||||||||| ||||| |||||||||||||||||||||||||||    
T  24122221 taggaaccgattgtgctgtttaatctttctgcaaaactaaggtaagggtgaga 24122273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 13967762 - 13967814
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 88  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13967762 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13967814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 13973237 - 13973289
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 88  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  13973237 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 13973289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 13302240 - 13302295
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13302240 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13302295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 13323787 - 13323842
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  13323787 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 13323842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 10389443 - 10389557
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10389443 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10389542  T
Q  172 tgatgatgattctga 186  Q
    |||||||||||||||    
T  10389543 tgatgatgattctga 10389557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 10414532 - 10414646
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10414532 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10414631  T
Q  172 tgatgatgattctga 186  Q
    |||||||||||||||    
T  10414632 tgatgatgattctga 10414646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 10421202 - 10421316
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||| | | ||||||| ||||||||  |  ||||  |||   ||||||||    
T  10421202 ctaaggtaagggtgggattatctttcaatgattataatgtataatttctgaaaagtaatctaattgaatagtttttaagaataatatgaaaattagggtt 10421301  T
Q  172 tgatgatgattctga 186  Q
    |||||||||||||||    
T  10421302 tgatgatgattctga 10421316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 12033444 - 12033499
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  12033444 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 12033499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 13312896 - 13312951
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| ||||| || ||||||||||| | |||||| ||||||||    
T  13312896 ctaaggtaagggtgagattatctttcaataatcataatatgtaatttttgaaaatt 13312951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 17131787 - 17131732
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  17131787 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 17131732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 51301644 - 51301589
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  51301644 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 51301589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026 (Bit Score: 217; Significance: 1e-119; HSPs: 2)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 56 - 324
Target Start/End: Original strand, 11834 - 12102
Alignment:
Q  56 taatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 155  Q
    ||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  11834 taatctttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataa 11933  T
Q  156 attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgt 255  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||| ||||||||||||||||||||| |||    
T  11934 attgagagttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatcttcagaatgaaaacttaatctttgt 12033  T
Q  256 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||||||||| |||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  12034 tgttgctgtgatcataagttgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 12102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0026; HSP #2
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 72 - 324
Target Start/End: Complemental strand, 111741 - 111491
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  111741 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 111642  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  111641 tgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 111543  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  111542 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 111491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 202; Significance: 1e-110; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 202; E-Value: 1e-110
Query Start/End: Original strand, 73 - 306
Target Start/End: Complemental strand, 23057993 - 23057760
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23057993 taaggtaagggtgagactatctctcgataatcataatctataattcctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 23057894  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  23057893 gatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctgctgtgatcataa 23057794  T
Q  273 attgattgagaattatgagcgattggatgaattg 306  Q
    ||||||||| ||||||||| ||||||||||||||    
T  23057793 attgattgaaaattatgagtgattggatgaattg 23057760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 29614136 - 29614398
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttgg-aagataaattga 160  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| |||||| || |||||||||    
T  29614136 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctagttgcataattttggaaaaataaattga 29614235  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |||||||||||||||||||||| |||||||||||||||||| |||||||||||||  |||| ||  |||||| |||||||||||||||||| ||||||||    
T  29614236 gggttagggtttgatgatgattatgaagggaaatgggtaatgatcatgttaattctcttgt-attgaatgtttagaatgaaaacttaatctttgttgttg 29614334  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||| |||||||| | ||||||  ||||||||||||||||||||||||||||||||    
T  29614335 ctgtgatcataacttgattgaaatttatgaatgattggatgaattgatgaatttgtgtatgatg 29614398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 173; E-Value: 6e-93
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 23839253 - 23839003
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagt-tttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  23839253 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtgtttggaagataaattgagggttagggtt 23839154  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||||| ||||| |||||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  23839153 tgatgatgattct-aaggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 23839055  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  23839054 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 23839003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 36 - 324
Target Start/End: Complemental strand, 18800529 - 18800242
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 135  Q
    |||||||||||| |||||||||||| |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18800529 taggaaccgattttgctgtgtaatccttctgcaaaactaatgtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 18800430  T
Q  136 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttca 234  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||| |||||||| | |||||||    
T  18800429 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 18800331  T
Q  235 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
     ||||||| |||||||||| |||||| |||||||| ||||||||||| || ||| |  ||||||||||||||||||| ||  ||||||||    
T  18800330 aaatgaaatcttaatctatattgttgttgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagtttggtatgatg 18800242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 10986170 - 10986431
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 160  Q
    ||||||||  ||||||||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  10986170 ttctgcaattctaaggtaagggtgagactatctttcaataatcataatctataatttctaaaaattgacctaattgcatagtttttggaagataaattga 10986269  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||||  |||||    
T  10986270 gggttagggtttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttg 10986368  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
     |||||||||||||||||||| ||||| ||  |||||||||||||||||||  | |||||||||    
T  10986369 ttgtgatcataaattgattga-aattacgattgattggatgaattgatgaagatttgtatgatg 10986431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 73 - 308
Target Start/End: Complemental strand, 4477912 - 4477678
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||    
T  4477912 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggtt 4477813  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| |||| |||||||| | |||||| |||||| |||||||| ||||||| |||||||||||||||||||| |||||| ||||||||||    
T  4477812 tgatgatgattctg-aggggaatgggtattgatcatgctaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcata 4477714  T
Q  272 aattgattgagaattatgagcgattggatgaattgat 308  Q
    |||||||||| ||||||||  |||||||||| |||||    
T  4477713 aattgattga-aattatgattgattggatgatttgat 4477678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 62 - 207
Target Start/End: Original strand, 930085 - 930229
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||| ||||||||| || ||||||||||    
T  930085 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgtatagttttgaaaaataaattgag 930184  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcat 207  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||    
T  930185 ggttagggtttgatgatgtttctgaaggg-aatgggtaatgatcat 930229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 21565214 - 21565462
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  21565214 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 21565312  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||||| ||||| |||||||||| ||||||||||||  |||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  21565313 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 21565411  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  21565412 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatg 21565462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 12168428 - 12168212
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  12168428 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 12168330  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  12168329 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 12168233  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  12168232 tgtaatccatgaattgattga 12168212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 19287337 - 19287121
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19287337 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19287239  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19287238 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19287142  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  19287141 tgtaatccatgaattgattga 19287121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 62 - 281
Target Start/End: Original strand, 19785859 - 19786075
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||| ||| |||||||||||| ||||| |||     
T  19785859 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctagttgaatagttttggaaaataaaatgaa 19785957  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19785958 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19786054  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  19786055 tgtaatccatgaattgattga 19786075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 98; E-Value: 3e-48
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 19878521 - 19878305
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19878521 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19878423  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19878422 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19878326  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  19878325 tgtaatccatgaattgattga 19878305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 94; E-Value: 8e-46
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 19884297 - 19884081
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    ||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| |||||||||||| ||||  |||     
T  19884297 ttctgcaaaactaaggttagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttggaaaataagatgaa 19884199  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  19884198 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 19884102  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  19884101 tgtaatccatgaattgattga 19884081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 34639986 - 34640100
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||||| ||||   ||   ||||||||    
T  34639986 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaatagttttggaaaataataagaaaattagggtt 34640085  T
Q  172 tgatgatgattctga 186  Q
    |||||||| ||||||    
T  34640086 tgatgatggttctga 34640100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 34646660 - 34646774
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||| ||| |||||||| ||||   ||   ||||||||    
T  34646660 ctaaggtaagggtgagactatctctcaataatcttaatctataatttctgaaaattgacctaattgaataattttggaaaataataagaaaattagggtt 34646759  T
Q  172 tgatgatgattctga 186  Q
    |||||||| ||||||    
T  34646760 tgatgatggttctga 34646774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 24512807 - 24512899
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||||| ||||||| |||| ||||||||| ||||||| |||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  24512807 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtgagggtgagactatctctcaataatcatagtatataatttctgaaaattg 24512899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 59; E-Value: 6e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Original strand, 25469704 - 25469816
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||||||||||||| || ||||||||| ||||  |||   ||||||||    
T  25469704 ctaaggtaagggtgagactatctctcaataatcataatctataa-ttctg-aaattgacctaattgaatggttttggaaaataatatgaaaattagggtt 25469801  T
Q  172 tgatgatgattctga 186  Q
    ||||||| |||||||    
T  25469802 tgatgataattctga 25469816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 25397228 - 25397172
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  25397228 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 25397172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 125
Target Start/End: Complemental strand, 9187550 - 9187498
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa 125  Q
    ||||||||||||||||||||||||| |||||| ||||  ||||||||||||||    
T  9187550 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaa 9187498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 19471335 - 19471391
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| |||||||| |||||||| ||||||||||| |||||||    
T  19471335 taaggtaagggtgaggctacctctcgatgatcataatatataatttctggaaattga 19471391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 25348542 - 25348486
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  25348542 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 25348486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 156
Target Start/End: Complemental strand, 31252478 - 31252394
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    ||||||||||||||||| ||||| |  || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  31252478 ctaaggtaagggtgagattatcttttaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 31252394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Complemental strand, 25598697 - 25598643
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||| ||||| || |||||||| |||| ||||||||||||||    
T  25598697 aggtaagggtgagactaactctcaatgatcataatatatattttctgaaaattga 25598643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 933615 - 933666
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 87  Q
    |||||||||||| |||| || |||| ||||||||| ||||||||||||||||    
T  933615 taggaaccgattttgctatgcaatctttctgcaaatctaaggtaagggtgag 933666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1773 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold1773
Description:

Target: scaffold1773; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 65 - 324
Target Start/End: Complemental strand, 1240 - 983
Alignment:
Q  65 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  1240 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 1142  T
Q  165 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 264  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  1141 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 1043  T
Q  265 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  1042 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 65 - 324
Target Start/End: Complemental strand, 50241 - 49984
Alignment:
Q  65 tgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggt 164  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||| ||||||||||||||||||||||||| |||||||||||||    
T  50241 tgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgagggt 50143  T
Q  165 tagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgt 264  Q
    ||||||||||||| |||| |||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||||||||||    
T  50142 tagggtttgatgaggattatgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatct-tgttgttgctgt 50044  T
Q  265 gatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  50043 gatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 49984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 199; Significance: 1e-108; HSPs: 13)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 199; E-Value: 1e-108
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 8045822 - 8046083
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  8045822 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 8045920  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    ||||||||||||| ||  |||||||||||||||||||||  || ||||||||||  |||||||||||||||||||||||||||||||||  |||||||||    
T  8045921 ggttagggtttgacgagaattctgaagggaaatgggtaaagataatgttaattctcttgtaatataatgttcagaatgaaaacttaatccttgttgttgc 8046020  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||||||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  8046021 tgtgatcataaattgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 8046083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 62 - 327
Target Start/End: Complemental strand, 11848179 - 11847908
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa----- 156  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||| | ||||||||||| || || ||         
T  11848179 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataattcctgaaaattgacctagtggcatagttttgaaaaattaaaatca 11848080  T
Q  157 -ttgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgt 255  Q
     ||||||||||||||||||||| |||||||||| | |||||||||| ||||||||||| |  || ||||||||||||||||||||||||||||||| |||    
T  11848079 attgagggttagggtttgatgacgattctgaagaggaatgggtaatgatcatgttaatccttttataatataatgttcagaatgaaaacttaatctttgt 11847980  T
Q  256 tgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatgatg 327  Q
    |||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||    
T  11847979 tgttgctgtgatcataaattgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatgatg 11847908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 72 - 186
Target Start/End: Complemental strand, 53483760 - 53483646
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 170  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  53483760 ctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 53483662  T
Q  171 ttgatgatgattctga 186  Q
    ||||||||||||||||    
T  53483661 ttgatgatgattctga 53483646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 57; E-Value: 9e-24
Query Start/End: Original strand, 36 - 128
Target Start/End: Complemental strand, 15408231 - 15408139
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||||| | ||||| |||| ||||||| | |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  15408231 taggaaccgatttttctgtgcaatctttctgcagatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 15408139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 8834951 - 8834895
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  8834951 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 8834895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 13888697 - 13888641
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  13888697 taaggtaagggtgaggctaactctcaatgatcataatgtataatttctgaaaattga 13888641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 72 - 210
Target Start/End: Complemental strand, 27906321 - 27906182
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggt 170  Q
    ||||| |||||||| || ||||| || || |||||||| ||||||||||||||||| |  |||| | |||||| | |||||| ||||||||  |||||||    
T  27906321 ctaagataagggtgggattatctttcaatgatcataatgtataatttctgaaaattaatataatagaatagttcttgaagataaaattgagaattagggt 27906222  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgtt 210  Q
     ||||| ||||| |||| | ||| | |||| |||||||||    
T  27906221 gtgatgttgattttgaaagaaaaggtgtaagaatcatgtt 27906182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 14486713 - 14486632
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    |||||||||||||||||||  || || |||||||| ||||||||||||||||| | | ||||| || ||| | |||||||||    
T  14486713 aggtaagggtgagactatccttcaatgatcataatatataatttctgaaaattaatcgaattgaattgttcttgaagataaa 14486632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 15245271 - 15245215
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15245271 taaggtaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15245215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 78 - 129
Target Start/End: Original strand, 22724691 - 22724742
Alignment:
Q  78 taagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  22724691 taagggtgagactatctctcaataataatagtatagaatttctgaaaattga 22724742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 43284008 - 43284059
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 87  Q
    ||||||||||||  |||||| |||| ||||||||| ||||||||||||||||    
T  43284008 taggaaccgatttcgctgtgcaatctttctgcaaatctaaggtaagggtgag 43284059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 67 - 108
Target Start/End: Original strand, 15747551 - 15747592
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataa 108  Q
    ||||||||||||||||||||||||| ||||| ||||| ||||    
T  15747551 caaaactaaggtaagggtgagactaactctcaataattataa 15747592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 15308176 - 15308120
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||| |||||||||| ||| ||||| || ||| |||| |||||||||||||||||||    
T  15308176 taagttaagggtgaggctaactctcaatgatcgtaatatataatttctgaaaattga 15308120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 189; Significance: 1e-102; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 111948 - 111728
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 160  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  111948 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaaattgacctaattgcatagttttggaagataaattga 111849  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||||||||||||||||||||||| |||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||    
T  111848 gggttagggtttgatgatgattctgaagggaaatgggtaatgatcatgttaattctcttgtaatataatgttcagaatgaaaacttaatctttgttgctg 111749  T
Q  261 ctgtgatcataaattgattga 281  Q
    |||||||||||||||||||||    
T  111748 ctgtgatcataaattgattga 111728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0924 (Bit Score: 184; Significance: 2e-99; HSPs: 1)
Name: scaffold0924
Description:

Target: scaffold0924; HSP #1
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 740 - 1002
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattga 160  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||    
T  740 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaaaataaattga 839  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||| |||| |||||||||||||||||| |||||| |||| |  |||||||||||||||||| || |||||||||||| ||||||||    
T  840 gggttagggtttgatgaggattatgaagggaaatgggtaatgatcatgataatactcttgtaatataatgttcaggataaaaacttaatct-tgttgttg 938  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
     |||||||||||| ||||||| | ||||||| ||||||||||||||||||||||||||||||||    
T  939 atgtgatcataaactgattgaaatttatgagtgattggatgaattgatgaatttgtgtatgatg 1002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 180; Significance: 4e-97; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 180; E-Value: 4e-97
Query Start/End: Original strand, 73 - 324
Target Start/End: Original strand, 19661454 - 19661703
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19661454 taaggtaagggtgagactttctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 19661553  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    ||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||| |||||||||||||||||||| |||||| |||||||||||    
T  19661554 gatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatattgttgttgtgatcataa 19661652  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  19661653 attgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 19661703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 6483772 - 6483523
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6483772 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6483673  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||| || |||| |||||||| | ||||||||||||| |||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6483672 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6483574  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  6483573 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 6483523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 160; E-Value: 3e-85
Query Start/End: Original strand, 73 - 324
Target Start/End: Complemental strand, 6487239 - 6486990
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggttt 172  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  6487239 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggttt 6487140  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||| || |||| |||||||| | ||||||||||||| |||||||  ||||||| ||||||||||||||||||||  ||||| |||||||||||    
T  6487139 gatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcataa 6487041  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| ||||||||  ||| |||||||||||||||  | |||||||||    
T  6487040 attgattga-aattatgattgatgggatgaattgatgaagatttgtatgatg 6486990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 62 - 269
Target Start/End: Complemental strand, 26583892 - 26583687
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  26583892 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 26583794  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    |||||||| |||||||||||||||| |||||| ||||||| |||||||||| |  |||||||  | ||||||||||||||  | ||||||||  ||||||    
T  26583793 ggttagggcttgatgatgattctgaggggaaa-gggtaatgatcatgttaaatatgttgtaaagtgatgttcagaatgaattcctaatctataatgttgc 26583695  T
Q  262 tgtgatca 269  Q
    ||||||||    
T  26583694 tgtgatca 26583687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 100; E-Value: 2e-49
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 23089057 - 23089305
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  23089057 aggtaagggtgagactatctctcattaatagataatatttaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 23089155  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||||| ||||| |||||||||| ||||||||||||  |||||||| | | |||| |||||||| ||||||||||  |||||||||||||||||    
T  23089156 gatgatgattct-aaggggaatgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgctgtgatcataa 23089254  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  23089255 attgattga-aaatataattgattggatgaattgatgaagttctgtatgatg 23089305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 91; E-Value: 5e-44
Query Start/End: Original strand, 75 - 324
Target Start/End: Complemental strand, 23879060 - 23878813
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 173  Q
    |||||||||||||||||||||||  |||| || || |||||||||  ||||||||||||||||| ||   ||| | ||| |||||||||||||||||| |    
T  23879060 aggtaagggtgagactatctctcattaataattatatataatttcgaaaaattgacctaattgcttaaccttg-aggattaaattgagggttagggtt-g 23878963  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 273  Q
     |||||||||||| |||||  ||||||| ||||||||||||  |||||||| | ||||||||||||||| ||||||||||  ||||| ||||||||||||    
T  23878962 ttgatgattctgaggggaatggggtaatgatcatgttaattatgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgttgtgatcataaa 23878863  T
Q  274 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||| || ||  |  ||||||||||||||||||| || |||||||||    
T  23878862 ttgattga-aaatagaattgattggatgaattgatgaagttttgtatgatg 23878813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 73 - 324
Target Start/End: Original strand, 23101463 - 23101713
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggt 170  Q
    |||||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||  ||   ||| | |||||| ||||||||||||||    
T  23101463 taaggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgtttaaccttg-aggataaaattgagggttagggt 23101561  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    |||||||||||||||| ||||| |||||||| ||||||||||||  |||||||| | | |||| |||||||| ||||||||||  ||||| |||||||||    
T  23101562 ttgatgatgattctgaggggaa-tgggtaatgatcatgttaattatgttgtaatgtgacgttcggaatgaaatcttaatctatactgttgttgtgatcat 23101660  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||| || ||| |  ||||||||||||| ||||| || |||||||||    
T  23101661 aaattgattga-aaatataattgattggatgaattcatgaagttctgtatgatg 23101713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 72 - 326
Target Start/End: Original strand, 5706023 - 5706274
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggttagggt 170  Q
    ||||||||||||||||||||||||||  |||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |||||||    
T  5706023 ctaaggtaagggtgagactatctctcattaatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaattagggt 5706121  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgat-ca 269  Q
    |||||||||||||||| ||  |||| ||||  || |||||| || |  || ||| ||||||| ||||||||| ||| ||| |||||||||||   || ||    
T  5706122 ttgatgatgattctgatgg--aatgagtaaagatgatgttagtttctctg-aatttaatgttaagaatgaaagcttgatccatgttgttgctacaatcca 5706218  T
Q  270 taaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatgat 326  Q
    | |||||||||| |||| |||   |||| |||||||||||||| |||| ||||||||    
T  5706219 ttaattgattga-aattttgatgaattgtatgaattgatgaatatgtggatgatgat 5706274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 52; E-Value: 9e-21
Query Start/End: Original strand, 36 - 87
Target Start/End: Original strand, 6260135 - 6260186
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 87  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6260135 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 6260186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 23265197 - 23265133
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23265197 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23265133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 23280265 - 23280201
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23280265 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23280201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 73 - 134
Target Start/End: Complemental strand, 21908414 - 21908353
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaa 134  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| ||||    
T  21908414 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatctaa 21908353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 19665037 - 19665081
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  19665037 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 19665081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 24661632 - 24661576
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| |||||||| |||||||| |||||||||||||||||||    
T  24661632 taaggtaagggtgaggctaactctcgatgatcataatatataatttctgaaaattga 24661576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 10632 - 10577
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  10632 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 10577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 25180929 - 25180984
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  25180929 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 25180984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 63 - 144
Target Start/End: Complemental strand, 26885246 - 26885166
Alignment:
Q  63 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 144  Q
    |||||||  |||||||||||||| || ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  26885246 tctgcaattctaaggtaagggtgggattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 26885166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0025 (Bit Score: 175; Significance: 4e-94; HSPs: 1)
Name: scaffold0025
Description:

Target: scaffold0025; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 75 - 312
Target Start/End: Original strand, 14398 - 14635
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 173  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  14398 aggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 14497  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 273  Q
    |||||||||||||||||||||||||||| ||||||||||||| |||||||| | |||||| |||||||||||||||||||| ||||||||||||||||||    
T  14498 atgatgattctgaagggaaatgggtaatgatcatgttaattctgttgtaatgtgatgttccgaatgaaaacttaatctatgctgttgctgtgatcataaa 14597  T
Q  274 ttgattgagaattatgagcgattggatgaattgatgaat 312  Q
     ||||||| || |||||  |||||||| |||||||||||    
T  14598 ctgattga-aaatatgattgattggataaattgatgaat 14635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 175; Significance: 4e-94; HSPs: 17)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 175; E-Value: 4e-94
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 8727735 - 8727984
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtttt-ggaagataaattgagggttagggtttg 173  Q
    |||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  8727735 aggtaagggtgagattatccctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtttg 8727834  T
Q  174 atgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaa 273  Q
    | ||||||||||| ||| | |||||| | ||||||||||||| |||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  8727835 acgatgattctgaggggta-tgggtattgatcatgttaattctgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcataaa 8727933  T
Q  274 ttgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||| ||||||||| ||||||||||||||||||||||||||||||||    
T  8727934 ttgattgaaaattatgagtgattggatgaattgatgaatttgtgtatgatg 8727984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 62 - 324
Target Start/End: Complemental strand, 23866680 - 23866418
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||| ||||||||||||||||||||||||| ||||||||||    
T  23866680 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatttataattcctgaaa-ttgacctaattgcatagttttggaaaataaattgag 23866582  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattc-cgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    ||||||||||||||||||||| ||||| |||||||||||| |||||||||||||   |||||||||||||||||||||  ||||||||||| ||||||||    
T  23866581 ggttagggtttgatgatgattatgaagagaaatgggtaatgatcatgttaattctatttgtaatataatgttcagaatataaacttaatct-tgttgttg 23866483  T
Q  261 ctgtgatcataaattgattgagaa-ttatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    || ||||| |||| |||||  ||| ||||||| ||||||||||||||||||||||||||||||||    
T  23866482 ctctgatcgtaaactgatttggaatttatgagtgattggatgaattgatgaatttgtgtatgatg 23866418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 72 - 324
Target Start/End: Complemental strand, 44477678 - 44477428
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44477678 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44477579  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||| || |||| |||||||| | ||||||||||||| |||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44477578 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44477480  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  44477479 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 44477428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 72 - 324
Target Start/End: Complemental strand, 44492836 - 44492586
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggttagggtt 171  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||    
T  44492836 ctaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagttttggaaaataaattgagggttagggtt 44492737  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    ||||||||||| || |||| |||||||| | ||||||||||||| |||||||  ||||||| ||||||||||||||||||||  ||||| ||||||||||    
T  44492736 tgatgatgattttg-aggggaatgggtattgatcatgttaattctgttgtaacgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcata 44492638  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  44492637 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 44492586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 36 - 324
Target Start/End: Original strand, 27940815 - 27941104
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 135  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |  || || || ||||| ||| ||||||||||||||    | |    
T  27940815 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaggctaaccttcaatgattataatatatgatttctgaaaattgtttgatt 27940914  T
Q  136 tgcatagtt-ttggaagataa--attgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgtt 232  Q
     | || ||| ||| || ||||  |||| |  ||||||||||||||||||||||| ||||| |||||| | ||||||||||||| |||||||| |||||||    
T  27940915 agaattgttcttgaaaaataagaattgggaattagggtttgatgatgattctgaggggaa-tgggtattgatcatgttaattctgttgtaatgtaatgtt 27941013  T
Q  233 cagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||| |||||||||  ||||| | |||||||||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  27941014 cagaatgaaaatttaatctatactgttgttatgatcataaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 27941104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 17054656 - 17054440
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    ||||||||||| |||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||     
T  17054656 ttctgcaaaaccaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataagatgaa 17054558  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  || |||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  17054557 agttagggtttgatgatgattctgatgg--aatgagtaaagatgatgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 17054461  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  17054460 tgtaatccatgaattgattga 17054440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 73 - 182
Target Start/End: Complemental strand, 18614327 - 18614217
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||| || ||||||||||||||||||| | ||||| || ||| | |||||| ||||||||  ||||||||    
T  18614327 taaggtaagggtgagactatctctcaataatcatgatatataatttctgaaaattgatccaattgaattgttcttgaagataaaattgagaattagggtt 18614228  T
Q  172 tgatgatgatt 182  Q
    | ||| |||||    
T  18614227 ttatgctgatt 18614217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 14056527 - 14056619
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||||| || |||| |||| ||||||||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  14056527 taggaaccgattttgttgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 14056619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 23482053 - 23482117
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  23482053 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 23482117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 40 - 128
Target Start/End: Complemental strand, 25112064 - 25111976
Alignment:
Q  40 aaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||| || |||| |||| |||| |||| |||||||||||||||||||||||||| ||||| ||| | | ||| ||||||||||||    
T  25112064 aaccgattttgttgtgcaatctttctacaaatctaaggtaagggtgagactatctctcaataataatagtatgtaaattctgaaaattg 25111976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 36 - 88
Target Start/End: Original strand, 30765873 - 30765925
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgaga 88  Q
    ||||||||||||||||||| | ||| |||||||||||||||||||||||||||    
T  30765873 taggaaccgattgtgctgttttatctttctgcaaaactaaggtaagggtgaga 30765925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 39364975 - 39364919
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  39364975 taaggtaagggtgagactatctctcaataataatagtatagaatttctgaaaattga 39364919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 29643386 - 29643440
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||||| ||||| || ||||||||||| | |||||||||||||||    
T  29643386 taaggtaagggtgagattatctttcaataatcataatatgtaatttctgaaaatt 29643440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 24320670 - 24320725
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  24320670 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 24320725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 37 - 97
Target Start/End: Original strand, 21325730 - 21325791
Alignment:
Q  37 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctctc 97  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||||||| ||| |||||    
T  21325730 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggtgaggctaactctc 21325791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 37 - 96
Target Start/End: Original strand, 21321132 - 21321192
Alignment:
Q  37 aggaaccgattgtgctgtgtaat-cattctgcaaaactaaggtaagggtgagactatctct 96  Q
    ||||||||||| ||||||| ||| | ||||||||| |||||||||||| ||||||| ||||    
T  21321132 aggaaccgattttgctgtgcaattctttctgcaaatctaaggtaagggcgagactaactct 21321192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 21931752 - 21931696
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  21931752 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 21931696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0247 (Bit Score: 174; Significance: 1e-93; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 36 - 324
Target Start/End: Complemental strand, 11433 - 11146
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 135  Q
    |||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  11433 taggaaccgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 11334  T
Q  136 tgcatagttttggaagata-aattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttca 234  Q
    ||| ||||||||||| ||| ||||||||||||||||||||||||||||||| |||| |||| ||||| ||||||||||||| |||||||| | |||||||    
T  11333 tgcttagttttggaaaatagaattgagggttagggtttgatgatgattctggaggg-aatgagtaatgatcatgttaattctgttgtaatgtgatgttca 11235  T
Q  235 gaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
     ||||||| ||||||| ||  |||||||||||||| ||||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  11234 aaatgaaatcttaatccatactgttgctgtgatcacaaattgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 11146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 1e-90; HSPs: 12)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 73 - 324
Target Start/End: Original strand, 20437024 - 20437274
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggtt 171  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  20437024 taaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgagggttagggtt 20437123  T
Q  172 tgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| |||| |||||||| | ||||||||||||  |||||||| ||||||||||||||||||||||||||||  ||||| ||||||||||    
T  20437124 tgatgatgattctg-aggggaatgggtattgatcatgttaattatgttgtaatgtaatgttcagaatgaaaacttaatctatactgttgttgtgatcata 20437222  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  20437223 aattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 20437274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 62 - 281
Target Start/End: Complemental strand, 41112100 - 41111884
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||| ||||||||| || ||||  |||     
T  41112100 ttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctg-aaattgacctaattgaatagttttgaaaaataagatgaa 41112002  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
     |||||||||||||||||||||||| ||  |||| ||||  |   ||||| || | ||| ||| ||||||| |||| |||| ||||||| ||||||||||    
T  41112001 agttagggtttgatgatgattctgatgg--aatgagtaaagacggtgttagtttc-ttggaatttaatgttaagaacgaaatcttaatccatgttgttgc 41111905  T
Q  262 tgtgat-cataaattgattga 281  Q
    ||| || ||| ||||||||||    
T  41111904 tgtaatccatgaattgattga 41111884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 32651627 - 32651563
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  32651627 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 32651563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 19663517 - 19663572
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  19663517 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 19663572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 18712854 - 18712790
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||| ||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  18712854 taaggtatgggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 18712790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 20805376 - 20805320
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  20805376 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 20805320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Complemental strand, 11158148 - 11158093
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  11158148 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 11158093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 75 - 129
Target Start/End: Original strand, 10811785 - 10811839
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||||||||||| ||||| ||| | || ||||||||||||||||    
T  10811785 aggtaagggtgagactatctctcaataataatagtgtagaatttctgaaaattga 10811839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 20851132 - 20851187
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20851132 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20851187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Original strand, 20857759 - 20857814
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  20857759 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 20857814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 21706331 - 21706276
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21706331 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21706276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 21710873 - 21710818
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  21710873 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 21710818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0553 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0553
Description:

Target: scaffold0553; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 72 - 324
Target Start/End: Original strand, 10195 - 10446
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 170  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  10195 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 10294  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    ||||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  10295 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 10393  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  10394 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 10446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0544 (Bit Score: 162; Significance: 2e-86; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 162; E-Value: 2e-86
Query Start/End: Original strand, 72 - 324
Target Start/End: Original strand, 1525 - 1776
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatag-ttttggaagataaattgagggttagggt 170  Q
    |||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  1525 ctaaggtaagggtgggactatctctcaataatcataatctataatttctgaaaattgacctaattgcatagtttttggaagataaattgtgggttagggt 1624  T
Q  171 ttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcat 270  Q
    ||||||||||||||| |||| |||||||| | ||||||||||||| |||||||| ||||||| ||||||||||||||||||||  ||||| |||||||||    
T  1625 ttgatgatgattctg-aggggaatgggtattgatcatgttaattctgttgtaatgtaatgtttagaatgaaaacttaatctatactgttgttgtgatcat 1723  T
Q  271 aaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||| ||||||||  |||||||||||||||||||  | |||||||||    
T  1724 aaattgattga-aattatgattgattggatgaattgatgaagatttgtatgatg 1776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 159; Significance: 1e-84; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 159; E-Value: 1e-84
Query Start/End: Original strand, 36 - 324
Target Start/End: Complemental strand, 18261 - 17973
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 135  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||    
T  18261 taggaaccgattgtgttgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttttgaaaattgacctaat 18162  T
Q  136 tgcatag-ttttggaagataaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccg-ttgtaatataatgttc 233  Q
    ||| ||| ||| |||| ||||||||||||||| ||||| ||||||||||| | ||||||| ||||||  |||||||||||| | ||||||| | |||| |    
T  18161 tgcttagctttaggaaaataaattgagggttaaggtttaatgatgattctaacgggaaat-ggtaatggtcatgttaattctgtttgtaatgtgatgtcc 18063  T
Q  234 agaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||||||||| ||||||||||||||||||||| |||||||||| ||||  ||  |||||||| ||||||||||| | |||||||||    
T  18062 agaatgaaaacttaacctatgttgttgctgtgatcatgaattgattga-aatttggattgattggataaattgatgaatatttgtatgatg 17973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117 (Bit Score: 157; Significance: 2e-83; HSPs: 2)
Name: scaffold0117
Description:

Target: scaffold0117; HSP #1
Raw Score: 157; E-Value: 2e-83
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 1887 - 2148
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 160  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  1887 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 1986  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||  ||||||| ||||||||| |||||||||||||||  ||||||||    
T  1987 gggttagggtttgatgatgattttgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcataatgaaaacttaatccttgttgttg 2084  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||| |||||||| | | ||||| ||||| ||||||||||||||||||||| ||||    
T  2085 ctgtgatcataacttgattgaaattgatgagtgattgtatgaattgatgaatttgtgtacgatg 2148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0117; HSP #2
Raw Score: 153; E-Value: 5e-81
Query Start/End: Original strand, 62 - 324
Target Start/End: Original strand, 8564 - 8825
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaa-ttgacctaattgcatagttttggaagataaattga 160  Q
    ||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||||| |||||||||||| |||| ||||    
T  8564 ttctgcaaaactaaggtaagggtgagactatatctcaataatcataatctataatttctgaaaaattgacctaattgtatagttttggaaaataatttga 8663  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |||||||||||||||||||||| ||| ||  |||||||||| || ||||||||||  ||||||| ||||||||| |||||||||||||||  ||||||||    
T  8664 gggttagggtttgatgatgattatgatgg--aatgggtaatgattatgttaattctcttgtaatttaatgttcaaaatgaaaacttaatccttgttgttg 8761  T
Q  261 ctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||| |||||||| | | || || ||||| ||||||||||||||||||||| ||||    
T  8762 ctgtgatcataacttgattgaaattgataagtgattgtatgaattgatgaatttgtgtacgatg 8825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0058 (Bit Score: 147; Significance: 2e-77; HSPs: 1)
Name: scaffold0058
Description:

Target: scaffold0058; HSP #1
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 62 - 312
Target Start/End: Complemental strand, 356 - 109
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgag 161  Q
    |||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||    
T  356 ttctgcaaaactaaggtaagggtgagactatctctcaataaccataatctataatttctgaaa-ttgacctaattgcatagttttggaaaataaattgag 258  T
Q  162 ggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgc 261  Q
    |||||||||||||||||||||||| |||| |||||||||| ||||||||||||   ||||| |||  |||||||| |||| |||||||||||||| |||     
T  257 ggttagggtttgatgatgattctg-aggggaatgggtaatgatcatgttaattttcttgtattatggtgttcagattgaagacttaatctatgttattga 159  T
Q  262 tgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 312  Q
    ||||||||||||||| |||| ||||||||  | |||||| |||||||||||    
T  158 tgtgatcataaattggttga-aattatgattggttggataaattgatgaat 109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0154 (Bit Score: 123; Significance: 4e-63; HSPs: 1)
Name: scaffold0154
Description:

Target: scaffold0154; HSP #1
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 36 - 269
Target Start/End: Complemental strand, 30949 - 30715
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaat 135  Q
    |||||| ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  30949 taggaatcgattttgctgtgtaatccttctgcaaaactaaggtaagggtgagactatctctcaataatcataatctataatttctgaaaattgacctaat 30850  T
Q  136 tgcatagttttggaagat-aaattgagggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttca 234  Q
    |||||||||||||||| | ||||||||| ||||||||||||||||||| ||| |||||  | ||||  |||||||||| |  |||||||  | |||| ||    
T  30849 tgcatagttttggaaggtaaaattgaggattagggtttgatgatgattttgaggggaatggtgtaacgatcatgttaaatatgttgtaaagtgatgtgca 30750  T
Q  235 gaatgaaaacttaatctatgttgttgctgtgatca 269  Q
    |||||||  | ||||||||  ||||| ||||||||    
T  30749 gaatgaattcctaatctataatgttgatgtgatca 30715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 101; Significance: 5e-50; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 3295 - 3544
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||||  |||||| ||||||||||||||||    
T  3295 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttggg-gataaaattgagggttagggttt 3393  T
Q  173 gatgatgattctgaagggaaatgggtaat-aatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcata 271  Q
    |||||||||||||| ||||| |||||||| |||||||||||||  |||||||| | ||||||||||||||| ||||||||||  |||||||||||||| |    
T  3394 gatgatgattctgaggggaa-tgggtaatgaatcatgttaattttgttgtaatgtgatgttcagaatgaaatcttaatctatactgttgctgtgatcaca 3492  T
Q  272 aattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  3493 aattgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 3544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0077 (Bit Score: 96; Significance: 5e-47; HSPs: 1)
Name: scaffold0077
Description:

Target: scaffold0077; HSP #1
Raw Score: 96; E-Value: 5e-47
Query Start/End: Original strand, 75 - 324
Target Start/End: Original strand, 3624 - 3872
Alignment:
Q  75 aggtaagggtgagactatctctcgataatc-ataatctataatttctgaaaattgacctaattgcatagttttggaagataaa-ttgagggttagggttt 172  Q
    |||||||||||||||||||||||  ||||  ||||| | ||||||| |||||||||||||||||| ||   ||| | |||||| ||||||||||||||||    
T  3624 aggtaagggtgagactatctctcattaatagataatatgtaatttcggaaaattgacctaattgcttaaccttg-aggataaaattgagggttagggttt 3722  T
Q  173 gatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataa 272  Q
    |||||||||||||| ||| | |||||||| ||||||||||||  |||||||| | |||||| |||||||| ||||||||||  ||||| |||||||||||    
T  3723 gatgatgattctgaggggga-tgggtaatgatcatgttaattatgttgtaatgtgatgttcggaatgaaatcttaatctatactgttgttgtgatcataa 3821  T
Q  273 attgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    ||||||||| || ||| |  ||||||||||||||||||| || |||||||||    
T  3822 attgattga-aaatataattgattggatgaattgatgaagttttgtatgatg 3872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796 (Bit Score: 82; Significance: 1e-38; HSPs: 2)
Name: scaffold0796
Description:

Target: scaffold0796; HSP #1
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 263
Target Start/End: Original strand, 1727 - 1920
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  1727 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 1825  T
Q  167 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 263  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| ||   | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  1826 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 1920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0796; HSP #2
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 67 - 263
Target Start/End: Original strand, 5750 - 5943
Alignment:
Q  67 caaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaattgagggtta 166  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||| |||||||||||| ||||  |||  ||||    
T  5750 caaaactaaggtaagggtgagactatctctcaataatcataatctataattcctg-aaattgacctaattgaatagttttggaaaataatatgaaagtta 5848  T
Q  167 gggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttgctg 263  Q
    |||||||||||||||||||| ||  |||| ||||  || |||||| ||   | | ||| ||||||| ||||||||| ||||||| ||| ||||||||    
T  5849 gggtttgatgatgattctgatgg--aatgagtaaggatgatgttagttttctcggaatttaatgttaagaatgaaagcttaatccatgctgttgctg 5943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 76; Significance: 4e-35; HSPs: 4)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 991 - 904
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 155  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  991 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #2
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 68 - 155
Target Start/End: Complemental strand, 8136 - 8049
Alignment:
Q  68 aaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataa 155  Q
    |||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||||||||||||| |||||||||||    
T  8136 aaaactaaggtaagggtgagactatctctcaataatcataatctatagtttctgaaaattgacctaattgcatagtcttggaagataa 8049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #3
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 900 - 806
Alignment:
Q  217 gttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 312  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  900 gttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456; HSP #4
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 217 - 312
Target Start/End: Complemental strand, 8045 - 7951
Alignment:
Q  217 gttgtaatataatgttcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaat 312  Q
    |||||||| | |||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||| |||||||| |||||||||||    
T  8045 gttgtaatgtgatgttcagaatgaaaacttaatctgtgttgttgctgtgatcataaattgattg-gaattatgagggattggataaattgatgaat 7951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0634 (Bit Score: 73; Significance: 3e-33; HSPs: 1)
Name: scaffold0634
Description:

Target: scaffold0634; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 232 - 324
Target Start/End: Complemental strand, 3558 - 3466
Alignment:
Q  232 tcagaatgaaaacttaatctatgttgttgctgtgatcataaattgattgagaattatgagcgattggatgaattgatgaatttgtgtatgatg 324  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||| | ||||||||||||||||||||||||||||||||    
T  3558 tcagaatgaaaacttaatctttgttgttgctgtgatcataaattgattgaaatttatgggtgattggatgaattgatgaatttgtgtatgatg 3466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0107 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 36 - 128
Target Start/End: Original strand, 40495 - 40587
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    |||||||||||| ||||||| |||| ||||||||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  40495 taggaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 40587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0129 (Bit Score: 60; Significance: 2e-25; HSPs: 1)
Name: scaffold0129
Description:

Target: scaffold0129; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 66 - 184
Target Start/End: Original strand, 45268 - 45386
Alignment:
Q  66 gcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaat-tgagggt 164  Q
    ||||| |||||||||||||||||||||||||| ||||||||||||||||||| |||||| |||||||||||| |||||||| ||| |  ||| |||   |    
T  45268 gcaaatctaaggtaagggtgagactatctctcaataatcataatctataattcctgaaa-ttgacctaattgaatagtttttgaaaaataatatgaaaat 45366  T
Q  165 tagggtttgatgatgattct 184  Q
    ||||||||||||||||||||    
T  45367 tagggtttgatgatgattct 45386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 39 - 128
Target Start/End: Complemental strand, 135562 - 135473
Alignment:
Q  39 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||| ||||||| |||| ||||| ||| |||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||    
T  135562 gaaccgattttgctgtgcaatctttctgaaaatctaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattg 135473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0235 (Bit Score: 55; Significance: 1e-22; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 36 - 126
Target Start/End: Original strand, 22556 - 22646
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaat 126  Q
    |||||||||||| ||||||| |||  ||||||||| | |||||||||||||||||||||||| ||||||||| | ||||||||||||||||    
T  22556 taggaaccgattttgctgtgcaatatttctgcaaatccaaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaat 22646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0310 (Bit Score: 53; Significance: 2e-21; HSPs: 1)
Name: scaffold0310
Description:

Target: scaffold0310; HSP #1
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 49 - 128
Target Start/End: Complemental strand, 17723 - 17643
Alignment:
Q  49 tgctgtgtaatcattctgcaaaa-ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||| |||| |||||||||| |||||||||||||||||||||||||| |||| |||||| ||||||||||||||||||    
T  17723 tgctgtgcaatctttctgcaaaatctaaggtaagggtgagactatctctcaataaccataatgtataatttctgaaaattg 17643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0222 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0222
Description:

Target: scaffold0222; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 16875 - 16811
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  16875 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 16811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 116951 - 116887
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||||||||||||||| |||||||    
T  116951 taaggtaagggtgagactatctctcaataatcatagtatataatttctgaaaattgatctaattg 116887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 34276 - 34331
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||||||||||||||||||| | ||||||||||||||||||    
T  34276 taaggtaagggtgagactatctctcgataatcatagtatataatttctgaaaattg 34331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 8 - 72
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  8 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 72  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0249 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0249
Description:

Target: scaffold0249; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 36 - 80
Target Start/End: Original strand, 2212 - 2256
Alignment:
Q  36 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 80  Q
    |||||||||||||||||||||||||||||||||||||||||||||    
T  2212 taggaaccgattgtgctgtgtaatcattctgcaaaactaaggtaa 2256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0146 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0146
Description:

Target: scaffold0146; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Complemental strand, 13687 - 13623
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| |||||| ||||  |||||||||||||||||| |||||||    
T  13687 taaggtaagggtgagactatctctcaataatcttaatacataatttctgaaaattgatctaattg 13623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 73 - 137
Target Start/End: Original strand, 101928 - 101992
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattg 137  Q
    ||||||||||||||||||||||||| ||||||||| | ||||||| ||||||||||| |||||||    
T  101928 taaggtaagggtgagactatctctcaataatcatagtatataattcctgaaaattgatctaattg 101992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0815 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: scaffold0815
Description:

Target: scaffold0815; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 1515 - 1453
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaa 124  Q
    |||||||||| ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||    
T  1515 ttctgcaaaattaaggtaagggtgagactaactctcaatgatcttaatgtataatttctgaaa 1453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2054 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold2054
Description:

Target: scaffold2054; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 62 - 161
Target Start/End: Complemental strand, 780 - 680
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctg-aaaattgacctaattgcatagttttggaagataaattga 160  Q
    |||||||||||||||||||||||| || ||||| || || ||| |||| ||||||||||| |||||| ||||||  | |||||| | ||| |||||||||    
T  780 ttctgcaaaactaaggtaagggtgggattatctttcaatgatcttaatatataatttctgaaaaattaacctaaaagaatagttcttgaaaataaattga 681  T
Q  161 g 161  Q
    |    
T  680 g 680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0609 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0609
Description:

Target: scaffold0609; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 5857 - 5941
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    |||||||||||||| || ||||| || || || ||||| ||||||||||||||||| | ||||||| |||||| | |||||||||    
T  5857 ctaaggtaagggtgggattatctttcaatgattataatatataatttctgaaaattaatctaattgaatagttcttgaagataaa 5941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0317 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0317
Description:

Target: scaffold0317; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 192
Target Start/End: Complemental strand, 1441 - 1321
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtt 171  Q
    |||||||||||||||||||||| || || ||||| || |||||||| |||||||||| ||||||  || ||| | || ||| ||| ||||  ||||||||    
T  1441 taaggtaagggtgagactatctttcaatgatcatgatatataatttttgaaaattgatctaattaaattgttcttgatgataaaactgagaattagggtt 1342  T
Q  172 tgatgatgattctgaagggaa 192  Q
    ||||| ||||| |||| ||||    
T  1341 tgatgctgattttgaaaggaa 1321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 37; Significance: 0.000000000008; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 37; E-Value: 0.000000000008
Query Start/End: Original strand, 73 - 129
Target Start/End: Complemental strand, 12352 - 12296
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || |||||||| |||||||||||||||||||    
T  12352 taaggtaagggtgaggctaactctcaatgatcataatatataatttctgaaaattga 12296  T

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Target: scaffold0139 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 73 - 128
Target Start/End: Original strand, 14997 - 15052
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattg 128  Q
    ||||||||||||||||||| ||||| || ||| |||| ||||||||||||||||||    
T  14997 taaggtaagggtgagactaactctcaatgatcttaatatataatttctgaaaattg 15052  T

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Target: scaffold0790 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0790
Description:

Target: scaffold0790; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 61 - 94
Target Start/End: Complemental strand, 5520 - 5487
Alignment:
Q  61 attctgcaaaactaaggtaagggtgagactatct 94  Q
    ||||||||||||||||||||||||||||||||||    
T  5520 attctgcaaaactaaggtaagggtgagactatct 5487  T

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Target: scaffold0261 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 62 - 262
Target Start/End: Original strand, 23559 - 23760
Alignment:
Q  62 ttctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaaga-taaattga 160  Q
    ||||||||  |||||||||||||| || ||||| |  || |||||||| ||||||||||||||||| | ||||  | |||||| | |||||  |||||||    
T  23559 ttctgcaattctaaggtaagggtgggattatctttgaatgatcataatgtataatttctgaaaattaatctaaaagaatagttcttgaagacaaaattga 23658  T
Q  161 gggttagggtttgatgatgattctgaagggaaatgggtaataatcatgttaattccgttgtaatataatgttcagaatgaaaacttaatctatgttgttg 260  Q
    |  ||||||| ||||| ||||| |||| | |||   |||| ||||||||| | |  |||||||| | |||||||| ||||   ||||||||||  |||||    
T  23659 gaattagggtgtgatgctgattttgaaagaaaagatgtaagaatcatgtttaatgtgttgtaatttgatgttcagtatgatttcttaatctataatgttg 23758  T
Q  261 ct 262  Q
    ||    
T  23759 ct 23760  T

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Target: scaffold0001 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 63 - 144
Target Start/End: Original strand, 493019 - 493099
Alignment:
Q  63 tctgcaaaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagtt 144  Q
    |||||||  ||||||||||||||||| ||||| || |||||| |||| ||||||||||||||||| | ||||| | ||||||    
T  493019 tctgcaattctaaggtaagggtgagattatctttcaataatc-taatgtataatttctgaaaattaatctaatggaatagtt 493099  T

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Target: scaffold0348 (Bit Score: 33; Significance: 0.000000002; HSPs: 2)
Name: scaffold0348
Description:

Target: scaffold0348; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 39 - 87
Target Start/End: Original strand, 14620 - 14668
Alignment:
Q  39 gaaccgattgtgctgtgtaatcattctgcaaaactaaggtaagggtgag 87  Q
    ||||||||| ||||||| |||| ||||||||| ||||||||||||||||    
T  14620 gaaccgattttgctgtgcaatctttctgcaaatctaaggtaagggtgag 14668  T

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Target: scaffold0348; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 9391 - 9336
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  9391 ctaaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 9336  T

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Target: scaffold0096 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0096
Description:

Target: scaffold0096; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 69 - 129
Target Start/End: Original strand, 39503 - 39563
Alignment:
Q  69 aaactaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    |||| |||||||||||||| ||| ||||| || |||||||| ||||||||| |||||||||    
T  39503 aaacaaaggtaagggtgaggctaactctcaatgatcataatatataatttcagaaaattga 39563  T

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Target: scaffold0127 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0127
Description:

Target: scaffold0127; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 10294 - 10239
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||||||| |||||  | ||||||||||| | |||||||||||||||    
T  10294 ctaaggtaagggtgagattatcttccaataatcataatatgtaatttctgaaaatt 10239  T

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Target: scaffold0023 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 72 - 127
Target Start/End: Complemental strand, 135493 - 135438
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    |||||||||| |||||| ||||| || ||| ||||||| |||||||||||||||||    
T  135493 ctaaggtaagcgtgagattatctttcaatagtcataatatataatttctgaaaatt 135438  T

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Target: scaffold1318 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1318
Description:

Target: scaffold1318; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 73 - 127
Target Start/End: Original strand, 1913 - 1967
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaatt 127  Q
    ||||||||||||| || ||||| || ||| ||||||| |||||||||||||||||    
T  1913 taaggtaagggtgggattatctttcaatagtcataatatataatttctgaaaatt 1967  T

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Target: scaffold0034 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 75 - 187
Target Start/End: Complemental strand, 73337 - 73224
Alignment:
Q  75 aggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagat-aaattgagggttagggtttg 173  Q
    ||||||||||| || ||||| || || |||||||| |||||||| |||||||| | ||||| | |||| | | |||||| ||||||||  ||||||| ||    
T  73337 aggtaagggtgggattatctttcaatgatcataatgtataatttatgaaaattaatctaataggatagctcttgaagataaaattgagaattagggtgtg 73238  T
Q  174 atgatgattctgaa 187  Q
    ||| ||||| ||||    
T  73237 atgttgattttgaa 73224  T

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Target: scaffold0453 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0453
Description:

Target: scaffold0453; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 72 - 156
Target Start/End: Original strand, 10550 - 10634
Alignment:
Q  72 ctaaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattgacctaattgcatagttttggaagataaa 156  Q
    |||||||||| ||| || ||||| || || ||| |||| ||||||||||||||||| | ||||| | |||||| | |||||||||    
T  10550 ctaaggtaagtgtgggattatctttcaatgatcttaatgtataatttctgaaaattaatctaatagaatagttcttgaagataaa 10634  T

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Target: scaffold0335 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0335
Description:

Target: scaffold0335; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 73 - 129
Target Start/End: Original strand, 2628 - 2684
Alignment:
Q  73 taaggtaagggtgagactatctctcgataatcataatctataatttctgaaaattga 129  Q
    ||||||||||||||| ||| ||||| || || ||||| ||||| |||||||||||||    
T  2628 taaggtaagggtgaggctaactctcaatgattataatatataacttctgaaaattga 2684  T

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