View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2082_high_1 (Length: 451)
Name: NF2082_high_1
Description: NF2082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2082_high_1 |
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Alignment Details
Target: chr7 (Bit Score: 316; Significance: 1e-178; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 316; E-Value: 1e-178
Query Start/End: Original strand, 37 - 431
Target Start/End: Complemental strand, 24500122 - 24499728
Alignment:
| Q |
37 |
gattttaatctttttgaaacacaccaactatattccattattataggtcaaatttgtttaaagatataatttgaagggaaaaagtaaccctaatattgct |
136 |
Q |
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| T |
24500122 |
gattctaatctttttgaaagacatcaactatattccattattataggtcaaatttgtttaaagatataatttgaagggaaaaagtaaccctaatattgct |
24500023 |
T |
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| Q |
137 |
tttatatatagtttagaaccatttagaatagattataaaaaattggtcgagaagaaggtaaaccgattttcttcaacgccnnnnnnnnggtaagccttaa |
236 |
Q |
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| T |
24500022 |
tttatatatagtttagaaccatttagaatagattataaaaaattggtcgagaagaaggtaaaccgattttcttcaacgccaaaaaaaaggtaagccttaa |
24499923 |
T |
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| Q |
237 |
tcgtaattattttcaaatataggaaagccttatttaaaactttaaagagagtgatgtgctttgcagctgtattttaccaattaattgacgatagaaaagt |
336 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |
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| T |
24499922 |
tcgtaattattttcaaatataggaaagccttatttaaaactttaaagagagtgatgtgctttgcagctgtatttgaccaattaattgacgatagaaaagt |
24499823 |
T |
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| Q |
337 |
ttgca-----tacatagaaccatatgatatcatatttcataactgatgaaatcgtgacatgatttgatgtgatagcacaactgttctttctagttttgct |
431 |
Q |
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||||| ||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
24499822 |
ttgcatacattacatagaacc-----atatcatatttcataactgatgaaatcgtgatatgatttgatgtgatagcacaactgttctttctagttttgct |
24499728 |
T |
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