View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2082_high_12 (Length: 220)
Name: NF2082_high_12
Description: NF2082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2082_high_12 |
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Alignment Details
Target: chr3 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 18 - 201
Target Start/End: Original strand, 1349677 - 1349860
Alignment:
| Q |
18 |
atatcaatgctcatagttgataaactaggtagaagagttttgttcatatcaggtggaattcaaatgttcttctcacaaattctaataggaagtataatag |
117 |
Q |
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| T |
1349677 |
atatcaatgctcatagttgataaactaggtagaagagttttgttcatatcaggtggaattcaaatgttcttctcacaaattctaataggaagtataatgg |
1349776 |
T |
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| Q |
118 |
cagcacaacttggtgatcatggtgaaataagcaagaaatatgcatatttgattctagttttgatatgcatttatgtcgccggat |
201 |
Q |
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| T |
1349777 |
cagcacaacttggtgatcatggtgaaataagcaagaaatatgcatacttgattctagttttgatatgcatttatgtcgccggat |
1349860 |
T |
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