View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2082_low_5 (Length: 380)

Name: NF2082_low_5
Description: NF2082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2082_low_5
NF2082_low_5
[»] chr3 (86 HSPs)
chr3 (13-229)||(29201941-29202153)
chr3 (13-229)||(29195099-29195306)
chr3 (244-362)||(29127908-29128026)
chr3 (245-362)||(6462401-6462518)
chr3 (244-355)||(7650223-7650334)
chr3 (244-362)||(45877443-45877561)
chr3 (244-362)||(47219133-47219251)
chr3 (244-353)||(31072876-31072985)
chr3 (245-356)||(53649722-53649833)
chr3 (244-362)||(29135902-29136020)
chr3 (244-362)||(54237437-54237555)
chr3 (244-358)||(54261219-54261333)
chr3 (241-353)||(45450444-45450555)
chr3 (244-354)||(23511564-23511674)
chr3 (244-357)||(30045815-30045928)
chr3 (244-361)||(51060281-51060398)
chr3 (244-356)||(3136694-3136805)
chr3 (244-356)||(13893921-13894033)
chr3 (244-362)||(25294949-25295067)
chr3 (244-358)||(30767247-30767361)
chr3 (244-353)||(35998571-35998679)
chr3 (244-352)||(7328843-7328950)
chr3 (248-356)||(10040552-10040659)
chr3 (244-356)||(28572211-28572323)
chr3 (241-353)||(35315954-35316066)
chr3 (244-351)||(26043812-26043919)
chr3 (244-355)||(47471828-47471938)
chr3 (274-361)||(49198341-49198428)
chr3 (257-356)||(52364813-52364912)
chr3 (276-362)||(3755559-3755645)
chr3 (244-358)||(48342013-48342127)
chr3 (247-356)||(26207804-26207913)
chr3 (245-362)||(51682955-51683072)
chr3 (244-356)||(15320181-15320293)
chr3 (244-356)||(33251657-33251769)
chr3 (245-357)||(34662320-34662432)
chr3 (245-355)||(3507534-3507644)
chr3 (242-356)||(29762153-29762267)
chr3 (241-327)||(37319886-37319972)
chr3 (244-314)||(49021203-49021273)
chr3 (244-352)||(41630512-41630620)
chr3 (282-362)||(42412812-42412892)
chr3 (268-355)||(32873573-32873660)
chr3 (244-355)||(47749105-47749215)
chr3 (244-354)||(7310703-7310813)
chr3 (244-354)||(26361967-26362077)
chr3 (244-357)||(10855378-10855490)
chr3 (249-346)||(50405608-50405705)
chr3 (244-356)||(15795494-15795605)
chr3 (244-348)||(24506648-24506751)
chr3 (249-361)||(40660332-40660444)
chr3 (244-355)||(928596-928707)
chr3 (246-345)||(4638160-4638259)
chr3 (268-358)||(8164546-8164636)
chr3 (241-343)||(19146969-19147071)
chr3 (249-362)||(33688940-33689053)
chr3 (245-357)||(2029268-2029380)
chr3 (244-328)||(13367447-13367531)
chr3 (244-292)||(21325123-21325171)
chr3 (244-328)||(55069679-55069763)
chr3 (244-327)||(43330732-43330815)
chr3 (244-355)||(49543515-49543626)
chr3 (246-356)||(8362572-8362682)
chr3 (244-362)||(22909773-22909890)
chr3 (244-354)||(26923261-26923371)
chr3 (304-362)||(49082813-49082871)
chr3 (278-355)||(7139748-7139825)
chr3 (256-361)||(24146340-24146445)
chr3 (249-358)||(35923628-35923737)
chr3 (282-347)||(39849076-39849140)
chr3 (255-356)||(45402362-45402463)
chr3 (274-362)||(3763040-3763127)
chr3 (317-357)||(7612999-7613039)
chr3 (262-334)||(7648757-7648829)
chr3 (244-300)||(36043674-36043730)
chr3 (276-352)||(47303521-47303597)
chr3 (304-355)||(5549292-5549343)
chr3 (254-325)||(32522005-32522076)
chr3 (244-327)||(34374442-34374525)
chr3 (244-311)||(44064584-44064651)
chr3 (244-346)||(26590266-26590368)
chr3 (286-363)||(6286113-6286189)
chr3 (246-291)||(50682525-50682570)
chr3 (290-358)||(11687155-11687223)
chr3 (289-353)||(40944881-40944945)
chr3 (306-346)||(50682482-50682522)
[»] chr5 (74 HSPs)
chr5 (244-354)||(42086325-42086435)
chr5 (244-356)||(1538427-1538539)
chr5 (244-353)||(9805003-9805112)
chr5 (240-352)||(11845796-11845908)
chr5 (242-362)||(14588614-14588734)
chr5 (244-356)||(20682616-20682728)
chr5 (244-362)||(19572714-19572832)
chr5 (244-354)||(23383655-23383765)
chr5 (244-362)||(41800967-41801085)
chr5 (241-333)||(24875364-24875456)
chr5 (244-356)||(40117411-40117523)
chr5 (245-353)||(42291505-42291613)
chr5 (244-362)||(38897718-38897835)
chr5 (244-356)||(5731919-5732031)
chr5 (244-356)||(41163459-41163570)
chr5 (276-354)||(7336618-7336696)
chr5 (244-362)||(13664250-13664368)
chr5 (244-357)||(14728077-14728191)
chr5 (244-358)||(23247351-23247464)
chr5 (244-362)||(24498973-24499090)
chr5 (244-362)||(24653811-24653928)
chr5 (244-361)||(42861217-42861334)
chr5 (245-362)||(20525828-20525945)
chr5 (244-356)||(8513515-8513627)
chr5 (244-356)||(12705010-12705122)
chr5 (240-356)||(25417178-25417294)
chr5 (244-362)||(18136275-18136397)
chr5 (244-356)||(9812868-9812980)
chr5 (244-356)||(18262617-18262729)
chr5 (253-356)||(15034071-15034174)
chr5 (254-353)||(18294493-18294591)
chr5 (245-356)||(37263237-37263347)
chr5 (244-353)||(3653913-3654020)
chr5 (264-354)||(7308383-7308473)
chr5 (244-354)||(7866579-7866689)
chr5 (244-362)||(12081898-12082016)
chr5 (286-356)||(28857124-28857194)
chr5 (244-362)||(30349569-30349687)
chr5 (241-362)||(18045629-18045749)
chr5 (244-328)||(20255393-20255477)
chr5 (245-297)||(40060339-40060391)
chr5 (267-354)||(35813020-35813107)
chr5 (244-354)||(5079329-5079438)
chr5 (244-334)||(39099778-39099868)
chr5 (241-354)||(21149732-21149845)
chr5 (244-356)||(12766127-12766239)
chr5 (244-328)||(21375375-21375459)
chr5 (244-356)||(38369696-38369807)
chr5 (282-357)||(30995116-30995191)
chr5 (244-362)||(9168252-9168369)
chr5 (264-358)||(14152044-14152138)
chr5 (244-334)||(43399146-43399236)
chr5 (277-354)||(20705561-20705638)
chr5 (244-325)||(27484188-27484269)
chr5 (304-356)||(1898997-1899049)
chr5 (278-362)||(26077131-26077215)
chr5 (244-355)||(2485194-2485304)
chr5 (241-308)||(27648421-27648488)
chr5 (244-299)||(36783296-36783351)
chr5 (244-309)||(17693339-17693405)
chr5 (253-327)||(28615274-28615348)
chr5 (244-302)||(28857196-28857254)
chr5 (244-345)||(24463885-24463986)
chr5 (244-352)||(4016254-4016362)
chr5 (282-362)||(35561855-35561935)
chr5 (297-352)||(19839327-19839382)
chr5 (244-299)||(28857002-28857057)
chr5 (282-353)||(35006772-35006843)
chr5 (268-314)||(14974347-14974393)
chr5 (282-328)||(20590023-20590069)
chr5 (255-341)||(32874798-32874884)
chr5 (294-352)||(35403561-35403619)
chr5 (241-297)||(16755104-16755160)
chr5 (244-356)||(20692929-20693041)
[»] chr8 (54 HSPs)
chr8 (244-356)||(45521168-45521279)
chr8 (244-361)||(18374004-18374121)
chr8 (244-362)||(2467117-2467235)
chr8 (244-362)||(43027298-43027416)
chr8 (245-353)||(4479296-4479403)
chr8 (244-352)||(583817-583923)
chr8 (245-358)||(15884556-15884668)
chr8 (244-356)||(8141101-8141213)
chr8 (244-356)||(10927605-10927717)
chr8 (241-356)||(44893274-44893389)
chr8 (244-362)||(6100465-6100583)
chr8 (244-362)||(43032894-43033012)
chr8 (241-331)||(23895592-23895682)
chr8 (277-362)||(1013009-1013094)
chr8 (244-356)||(14846575-14846686)
chr8 (244-356)||(24837241-24837353)
chr8 (269-356)||(33401823-33401910)
chr8 (244-362)||(3418512-3418630)
chr8 (244-362)||(26570917-26571035)
chr8 (244-356)||(9859994-9860106)
chr8 (244-352)||(17981444-17981552)
chr8 (282-356)||(6042820-6042894)
chr8 (244-362)||(14666070-14666188)
chr8 (244-356)||(8997543-8997655)
chr8 (249-356)||(11785915-11786021)
chr8 (268-343)||(22958782-22958857)
chr8 (244-354)||(10535403-10535512)
chr8 (251-353)||(24938568-24938670)
chr8 (244-346)||(27975900-27976002)
chr8 (244-346)||(28033169-28033271)
chr8 (240-354)||(36662406-36662519)
chr8 (282-347)||(29933780-29933845)
chr8 (244-356)||(68097-68209)
chr8 (244-356)||(2964075-2964187)
chr8 (274-362)||(20240563-20240651)
chr8 (274-362)||(20252416-20252504)
chr8 (282-354)||(33935772-33935844)
chr8 (288-356)||(38922457-38922525)
chr8 (245-328)||(16963694-16963777)
chr8 (244-314)||(11298266-11298336)
chr8 (244-362)||(16893930-16894046)
chr8 (282-328)||(21174167-21174213)
chr8 (244-324)||(3692864-3692944)
chr8 (241-352)||(6940561-6940671)
chr8 (284-335)||(8586978-8587029)
chr8 (264-327)||(35496274-35496337)
chr8 (262-320)||(25848211-25848269)
chr8 (281-355)||(34846813-34846887)
chr8 (241-302)||(8817086-8817147)
chr8 (245-362)||(13085517-13085633)
chr8 (242-343)||(36914430-36914531)
chr8 (254-354)||(3567905-3568005)
chr8 (276-347)||(22810088-22810156)
chr8 (304-356)||(30903335-30903386)
[»] chr6 (42 HSPs)
chr6 (244-356)||(5253222-5253334)
chr6 (244-362)||(8932654-8932772)
chr6 (244-362)||(8944120-8944238)
chr6 (244-362)||(21898641-21898759)
chr6 (241-361)||(8938705-8938825)
chr6 (244-356)||(29444764-29444876)
chr6 (244-362)||(6606096-6606214)
chr6 (244-362)||(12606423-12606541)
chr6 (241-355)||(29333135-29333248)
chr6 (244-356)||(3601083-3601195)
chr6 (244-356)||(13036003-13036115)
chr6 (244-356)||(14107357-14107469)
chr6 (244-347)||(5029825-5029928)
chr6 (249-356)||(2271307-2271412)
chr6 (244-356)||(8611973-8612085)
chr6 (241-355)||(9179732-9179846)
chr6 (244-362)||(13468926-13469044)
chr6 (244-354)||(19089499-19089609)
chr6 (244-358)||(34954618-34954732)
chr6 (244-328)||(9633624-9633708)
chr6 (244-362)||(3587944-3588062)
chr6 (245-352)||(11142606-11142713)
chr6 (244-299)||(21167431-21167486)
chr6 (245-355)||(8149797-8149906)
chr6 (244-362)||(12635807-12635925)
chr6 (244-362)||(24671865-24671983)
chr6 (277-358)||(9147298-9147379)
chr6 (244-313)||(14783419-14783488)
chr6 (244-328)||(30410472-30410556)
chr6 (244-328)||(30788852-30788936)
chr6 (244-354)||(13584445-13584559)
chr6 (241-357)||(9366420-9366535)
chr6 (294-362)||(10311518-10311586)
chr6 (260-355)||(19230574-19230668)
chr6 (244-334)||(31129198-31129288)
chr6 (282-352)||(33859356-33859426)
chr6 (244-353)||(13391289-13391397)
chr6 (264-327)||(8888910-8888973)
chr6 (249-328)||(17114901-17114980)
chr6 (245-328)||(32157167-32157250)
chr6 (279-356)||(21016785-21016862)
chr6 (251-328)||(21945316-21945392)
[»] chr4 (80 HSPs)
chr4 (244-356)||(36145214-36145326)
chr4 (244-356)||(55921034-55921146)
chr4 (244-362)||(29895781-29895899)
chr4 (241-358)||(2559305-2559422)
chr4 (245-362)||(33647715-33647832)
chr4 (250-362)||(8889016-8889128)
chr4 (245-352)||(40780861-40780968)
chr4 (244-362)||(20421768-20421885)
chr4 (244-362)||(38166021-38166139)
chr4 (244-356)||(7246645-7246757)
chr4 (244-356)||(53599060-53599172)
chr4 (244-358)||(52950080-52950194)
chr4 (244-345)||(4738629-4738730)
chr4 (244-353)||(38075436-38075545)
chr4 (274-362)||(1446820-1446908)
chr4 (244-356)||(43468347-43468459)
chr4 (244-354)||(10541018-10541127)
chr4 (244-346)||(16450310-16450412)
chr4 (244-354)||(48015072-48015182)
chr4 (244-356)||(16645118-16645230)
chr4 (244-352)||(42722576-42722684)
chr4 (244-356)||(47078458-47078570)
chr4 (244-362)||(3159468-3159586)
chr4 (254-352)||(20354641-20354739)
chr4 (244-362)||(43458607-43458725)
chr4 (244-353)||(14858714-14858822)
chr4 (244-357)||(15839934-15840046)
chr4 (244-356)||(38168257-38168368)
chr4 (241-327)||(49952141-49952228)
chr4 (244-362)||(5472847-5472965)
chr4 (268-358)||(6779209-6779299)
chr4 (244-354)||(14124018-14124128)
chr4 (244-353)||(8064797-8064906)
chr4 (284-353)||(20532448-20532517)
chr4 (244-328)||(17080071-17080155)
chr4 (244-356)||(24166450-24166562)
chr4 (254-362)||(40272340-40272448)
chr4 (247-352)||(1940779-1940881)
chr4 (241-356)||(42722375-42722489)
chr4 (249-352)||(48317279-48317382)
chr4 (241-343)||(2686451-2686553)
chr4 (245-323)||(6032643-6032721)
chr4 (244-354)||(12703544-12703654)
chr4 (245-343)||(14859304-14859402)
chr4 (244-362)||(20128303-20128421)
chr4 (244-362)||(49260664-49260782)
chr4 (241-362)||(295529-295649)
chr4 (241-354)||(21429303-21429416)
chr4 (245-346)||(26237422-26237523)
chr4 (244-356)||(45721086-45721198)
chr4 (244-353)||(36262766-36262873)
chr4 (244-314)||(47682381-47682451)
chr4 (282-355)||(3574483-3574556)
chr4 (245-358)||(13073536-13073649)
chr4 (262-315)||(31635764-31635817)
chr4 (282-362)||(14567953-14568033)
chr4 (244-352)||(29588740-29588848)
chr4 (268-355)||(38841391-38841476)
chr4 (253-313)||(46108734-46108794)
chr4 (244-335)||(18531540-18531631)
chr4 (243-314)||(31588728-31588799)
chr4 (268-362)||(21055242-21055336)
chr4 (241-362)||(27248422-27248541)
chr4 (241-315)||(54946290-54946364)
chr4 (241-314)||(14567281-14567354)
chr4 (254-362)||(55005317-55005423)
chr4 (244-328)||(24850626-24850710)
chr4 (265-357)||(26479969-26480061)
chr4 (244-356)||(30317233-30317345)
chr4 (255-362)||(3507265-3507371)
chr4 (244-362)||(21192636-21192752)
chr4 (244-327)||(55703751-55703834)
chr4 (276-362)||(8824558-8824644)
chr4 (310-356)||(13436812-13436858)
chr4 (244-314)||(14597899-14597969)
chr4 (244-302)||(25406562-25406620)
chr4 (269-319)||(28944968-28945018)
chr4 (264-362)||(41162901-41162999)
chr4 (256-330)||(53354558-53354632)
chr4 (249-302)||(13552156-13552209)
[»] chr2 (73 HSPs)
chr2 (246-362)||(34356195-34356311)
chr2 (244-362)||(25540403-25540521)
chr2 (244-356)||(12864219-12864331)
chr2 (244-356)||(18902529-18902641)
chr2 (242-362)||(38962752-38962872)
chr2 (241-362)||(2550857-2550978)
chr2 (241-362)||(6358147-6358268)
chr2 (249-350)||(10669593-10669694)
chr2 (244-356)||(14169608-14169720)
chr2 (244-356)||(41220630-41220742)
chr2 (244-360)||(44139475-44139591)
chr2 (254-356)||(331496-331598)
chr2 (244-346)||(34722685-34722787)
chr2 (244-354)||(37560170-37560280)
chr2 (241-362)||(19976803-19976924)
chr2 (244-356)||(10823055-10823167)
chr2 (244-356)||(12455305-12455417)
chr2 (244-362)||(3643886-3644004)
chr2 (244-362)||(7747263-7747381)
chr2 (244-356)||(22593130-22593240)
chr2 (244-356)||(38005397-38005509)
chr2 (278-361)||(45263700-45263783)
chr2 (244-354)||(3811690-3811800)
chr2 (244-362)||(21286433-21286551)
chr2 (244-353)||(8410129-8410238)
chr2 (255-352)||(10026626-10026723)
chr2 (241-354)||(16034934-16035047)
chr2 (244-344)||(16325602-16325702)
chr2 (244-328)||(20116611-20116695)
chr2 (244-352)||(42770650-42770758)
chr2 (249-356)||(7787051-7787158)
chr2 (244-355)||(41031905-41032016)
chr2 (244-362)||(3848913-3849031)
chr2 (244-346)||(5035293-5035395)
chr2 (244-358)||(34346286-34346400)
chr2 (244-362)||(35946728-35946845)
chr2 (245-354)||(2784930-2785038)
chr2 (245-356)||(20612534-20612647)
chr2 (255-362)||(10046487-10046593)
chr2 (288-356)||(15079478-15079546)
chr2 (244-356)||(29422210-29422322)
chr2 (244-352)||(29653626-29653729)
chr2 (244-354)||(2528340-2528450)
chr2 (244-354)||(28616378-28616488)
chr2 (293-355)||(40968963-40969025)
chr2 (244-345)||(24179575-24179675)
chr2 (241-354)||(33005749-33005861)
chr2 (244-343)||(28525454-28525554)
chr2 (250-354)||(39201513-39201617)
chr2 (241-356)||(9360744-9360859)
chr2 (245-352)||(43303292-43303399)
chr2 (241-355)||(18649022-18649136)
chr2 (244-353)||(44945592-44945700)
chr2 (244-356)||(15234060-15234172)
chr2 (244-328)||(16813164-16813248)
chr2 (244-328)||(16852443-16852527)
chr2 (282-353)||(21180351-21180422)
chr2 (277-352)||(25604594-25604668)
chr2 (244-299)||(44023347-44023402)
chr2 (245-311)||(21641990-21642056)
chr2 (264-362)||(25549717-25549815)
chr2 (282-355)||(13026448-13026521)
chr2 (244-301)||(31596431-31596488)
chr2 (276-345)||(34130333-34130401)
chr2 (282-327)||(41187873-41187918)
chr2 (244-333)||(44773281-44773370)
chr2 (241-297)||(792208-792264)
chr2 (244-356)||(39806884-39806996)
chr2 (245-314)||(36480438-36480504)
chr2 (244-330)||(13104824-13104910)
chr2 (282-328)||(30721892-30721938)
chr2 (244-328)||(27725963-27726047)
chr2 (290-362)||(41187698-41187770)
[»] chr7 (63 HSPs)
chr7 (241-356)||(38578863-38578978)
chr7 (241-356)||(22573811-22573925)
chr7 (244-362)||(48804675-48804793)
chr7 (244-356)||(17748381-17748493)
chr7 (244-362)||(43861971-43862089)
chr7 (244-354)||(1797460-1797570)
chr7 (244-362)||(10047875-10047993)
chr7 (244-354)||(29151940-29152050)
chr7 (244-356)||(13095856-13095968)
chr7 (242-358)||(27028275-27028391)
chr7 (244-356)||(37514919-37515031)
chr7 (244-362)||(4195201-4195319)
chr7 (244-353)||(1605942-1606051)
chr7 (244-356)||(22973965-22974077)
chr7 (244-356)||(34659224-34659336)
chr7 (274-362)||(36619283-36619371)
chr7 (244-356)||(39474938-39475050)
chr7 (246-356)||(18785667-18785777)
chr7 (244-358)||(21530744-21530858)
chr7 (240-362)||(27875083-27875205)
chr7 (282-356)||(43925510-43925584)
chr7 (244-362)||(48244355-48244473)
chr7 (244-353)||(14650318-14650427)
chr7 (244-362)||(3353417-3353534)
chr7 (244-354)||(42210261-42210371)
chr7 (244-361)||(8734685-8734802)
chr7 (253-354)||(19914711-19914811)
chr7 (244-333)||(48551878-48551967)
chr7 (282-354)||(365140-365212)
chr7 (244-352)||(5069814-5069922)
chr7 (244-344)||(23658189-23658289)
chr7 (267-355)||(30827291-30827379)
chr7 (244-328)||(39420863-39420947)
chr7 (244-356)||(47341874-47341986)
chr7 (244-356)||(49142668-49142780)
chr7 (244-362)||(24969325-24969441)
chr7 (241-328)||(29805436-29805523)
chr7 (249-356)||(45960007-45960114)
chr7 (244-362)||(43346778-43346896)
chr7 (245-354)||(26423288-26423396)
chr7 (244-361)||(45697189-45697305)
chr7 (247-355)||(14535290-14535398)
chr7 (244-356)||(22993366-22993478)
chr7 (244-324)||(41945503-41945583)
chr7 (244-356)||(42032094-42032206)
chr7 (244-315)||(3603396-3603467)
chr7 (240-355)||(20247165-20247280)
chr7 (253-332)||(41267932-41268011)
chr7 (244-313)||(24983417-24983487)
chr7 (244-356)||(10317745-10317856)
chr7 (274-362)||(44336885-44336973)
chr7 (249-356)||(5039422-5039529)
chr7 (251-362)||(28396166-28396277)
chr7 (262-354)||(4228771-4228860)
chr7 (244-361)||(21190779-21190896)
chr7 (290-355)||(48224776-48224840)
chr7 (268-356)||(4973133-4973221)
chr7 (317-352)||(45447972-45448007)
chr7 (244-326)||(44961637-44961719)
chr7 (249-302)||(9685779-9685832)
chr7 (304-357)||(22268088-22268141)
chr7 (244-333)||(28744183-28744272)
chr7 (244-344)||(32823253-32823353)
[»] chr1 (77 HSPs)
chr1 (244-362)||(5504021-5504139)
chr1 (244-362)||(41663856-41663974)
chr1 (244-356)||(9659179-9659290)
chr1 (264-362)||(10336506-10336604)
chr1 (244-362)||(16263535-16263653)
chr1 (241-362)||(18649349-18649470)
chr1 (244-356)||(26660134-26660245)
chr1 (244-354)||(26325810-26325920)
chr1 (244-356)||(10422784-10422896)
chr1 (244-362)||(10172971-10173089)
chr1 (254-356)||(14254278-14254380)
chr1 (244-362)||(49078104-49078222)
chr1 (244-356)||(37339815-37339928)
chr1 (244-356)||(5855518-5855630)
chr1 (244-356)||(8763987-8764099)
chr1 (274-362)||(13262073-13262161)
chr1 (244-352)||(17642004-17642112)
chr1 (244-356)||(18915863-18915975)
chr1 (282-362)||(48798108-48798188)
chr1 (244-354)||(32142846-32142956)
chr1 (244-356)||(43959821-43959933)
chr1 (244-355)||(45361882-45361993)
chr1 (242-356)||(26258692-26258805)
chr1 (244-358)||(30927727-30927841)
chr1 (244-362)||(50503361-50503479)
chr1 (241-353)||(2567275-2567387)
chr1 (282-362)||(17358509-17358589)
chr1 (264-352)||(33498859-33498947)
chr1 (244-356)||(34697331-34697443)
chr1 (244-362)||(11397889-11398006)
chr1 (241-327)||(14357780-14357866)
chr1 (244-362)||(15465955-15466073)
chr1 (244-354)||(32150922-32151032)
chr1 (244-356)||(32867-32979)
chr1 (282-362)||(12744561-12744641)
chr1 (282-362)||(12755551-12755631)
chr1 (241-352)||(31576544-31576655)
chr1 (274-360)||(35908749-35908836)
chr1 (241-344)||(50371831-50371934)
chr1 (244-362)||(2980931-2981049)
chr1 (244-314)||(4581682-4581752)
chr1 (244-362)||(33004015-33004133)
chr1 (244-358)||(34719770-34719884)
chr1 (282-355)||(28324618-28324691)
chr1 (244-356)||(16956462-16956574)
chr1 (244-328)||(18808289-18808373)
chr1 (244-356)||(40288477-40288589)
chr1 (244-352)||(44969665-44969772)
chr1 (244-355)||(31152713-31152823)
chr1 (254-353)||(33418125-33418224)
chr1 (244-353)||(12036743-12036853)
chr1 (244-354)||(18708540-18708650)
chr1 (241-327)||(19195391-19195472)
chr1 (244-362)||(46929738-46929855)
chr1 (241-314)||(45726430-45726503)
chr1 (277-362)||(47312932-47313016)
chr1 (244-352)||(9853277-9853385)
chr1 (244-328)||(17389795-17389879)
chr1 (282-349)||(6563444-6563511)
chr1 (242-297)||(8905161-8905216)
chr1 (244-347)||(35211172-35211275)
chr1 (304-362)||(34334355-34334413)
chr1 (249-347)||(38859121-38859219)
chr1 (244-313)||(6899597-6899666)
chr1 (274-355)||(17988690-17988770)
chr1 (282-347)||(21849243-21849307)
chr1 (264-313)||(38791630-38791679)
chr1 (244-297)||(51437512-51437565)
chr1 (274-354)||(13265936-13266016)
chr1 (244-328)||(50094928-50095012)
chr1 (244-355)||(15238106-15238217)
chr1 (294-353)||(45536707-45536766)
chr1 (304-354)||(51437467-51437517)
chr1 (244-301)||(3850742-3850799)
chr1 (247-344)||(17092480-17092577)
chr1 (245-358)||(30044501-30044614)
chr1 (298-362)||(82314-82377)
[»] scaffold0009 (3 HSPs)
scaffold0009 (244-358)||(42831-42945)
scaffold0009 (317-357)||(9433-9473)
scaffold0009 (245-301)||(9495-9551)
[»] scaffold0291 (1 HSPs)
scaffold0291 (244-356)||(6853-6965)
[»] scaffold0016 (1 HSPs)
scaffold0016 (244-354)||(8700-8810)
[»] scaffold0086 (1 HSPs)
scaffold0086 (241-358)||(26179-26296)
[»] scaffold0170 (1 HSPs)
scaffold0170 (262-362)||(9837-9937)
[»] scaffold0002 (4 HSPs)
scaffold0002 (244-362)||(319414-319532)
scaffold0002 (244-356)||(568-680)
scaffold0002 (245-294)||(410810-410859)
scaffold0002 (310-362)||(412091-412143)
[»] scaffold0209 (1 HSPs)
scaffold0209 (244-352)||(12577-12683)
[»] scaffold0316 (1 HSPs)
scaffold0316 (244-358)||(1613-1727)
[»] scaffold0011 (2 HSPs)
scaffold0011 (244-353)||(224318-224427)
scaffold0011 (245-362)||(186510-186626)
[»] scaffold0376 (1 HSPs)
scaffold0376 (244-356)||(12668-12780)
[»] scaffold0010 (2 HSPs)
scaffold0010 (244-343)||(155710-155809)
scaffold0010 (245-356)||(25784-25895)
[»] scaffold0005 (4 HSPs)
scaffold0005 (286-353)||(271115-271182)
scaffold0005 (282-362)||(249342-249422)
scaffold0005 (241-314)||(250021-250094)
scaffold0005 (244-314)||(219409-219479)
[»] scaffold0050 (1 HSPs)
scaffold0050 (282-355)||(72631-72704)
[»] scaffold0384 (1 HSPs)
scaffold0384 (253-356)||(5971-6073)
[»] scaffold0223 (1 HSPs)
scaffold0223 (244-327)||(16906-16989)
[»] scaffold0029 (1 HSPs)
scaffold0029 (244-355)||(41043-41154)
[»] scaffold0006 (1 HSPs)
scaffold0006 (247-352)||(68519-68621)
[»] scaffold0041 (1 HSPs)
scaffold0041 (241-314)||(25125-25198)
[»] scaffold0004 (2 HSPs)
scaffold0004 (244-363)||(94979-95097)
scaffold0004 (244-356)||(7834-7946)
[»] scaffold0001 (1 HSPs)
scaffold0001 (244-328)||(65151-65235)
[»] scaffold0341 (1 HSPs)
scaffold0341 (282-349)||(18637-18704)
[»] scaffold0013 (1 HSPs)
scaffold0013 (244-350)||(51735-51837)
[»] scaffold0079 (1 HSPs)
scaffold0079 (297-356)||(8173-8231)
[»] scaffold0116 (1 HSPs)
scaffold0116 (253-321)||(17423-17491)


Alignment Details
Target: chr3 (Bit Score: 163; Significance: 6e-87; HSPs: 86)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 163; E-Value: 6e-87
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 29201941 - 29202153
Alignment:
Q  13 aatatgttggagaatcattcaaggggtgatatgtggttatttcatatcatattagtagtcaaagttgatgcatcatgtagcaccaaccaaacatgatcnn 112  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||      
T  29201941 aatatgttggagaatcattcaaggggtgatatgtggttatatcatatcatattagtagtcaaagttgatgcatcatgtagcaccaaccaaacatgatcaa 29202040  T
Q  113 nnnnnttgcttatctattattgattgagatccaaaggtataccacaattgtagggcaccagtcactttcatgaaacactccctcccgaccatgtttgatt 212  Q
         |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    | |||||||| ||||||||||    
T  29202041 aaaaattgcttatctattattgattgagatccaaaggtataccacaattgtagggcaccggtcactttcatgaaa----ctctcccgactatgtttgatt 29202136  T
Q  213 gaataaatcttaattga 229  Q
    |||||||||||||||||    
T  29202137 gaataaatcttaattga 29202153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 131; E-Value: 7e-68
Query Start/End: Original strand, 13 - 229
Target Start/End: Original strand, 29195099 - 29195306
Alignment:
Q  13 aatatgttggagaatcattcaaggggtgatatgtggttatttcatatcatattagtagtcaaagttgatgcatcatgtagcaccaaccaaacatgatcnn 112  Q
    |||||||||||||||||||||| ||| ||||||||||      |||||||| || ||||||||||||||||||||| |||||||||||||||||| ||      
T  29195099 aatatgttggagaatcattcaacgggcgatatgtggt------atatcatactaatagtcaaagttgatgcatcatatagcaccaaccaaacatgttcaa 29195192  T
Q  113 nnnnnttgcttatctattattgattgagatccaaaggtataccacaattgtagggcaccagtcactttcatgaaacactccctcccgaccatgtttgatt 212  Q
         |||||||| ||||   |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29195193 aaaaattgcttatatatt---gattgagatccaaaggtataccacaattgtagggcaccagtcactttcatgaaacactccctcccgaccatgtttgatt 29195289  T
Q  213 gaataaatcttaattga 229  Q
    |||||||||||||||||    
T  29195290 gaataaatcttaattga 29195306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 29128026 - 29127908
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||||| ||| ||| ||||||||||||||||||||| |||||||||||| |||| ||||||||||||||||||||||    
T  29128026 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaa 29127927  T
Q  344 cccggtattccccagatac 362  Q
    |||| ||||||||||||||    
T  29127926 cccgatattccccagatac 29127908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 245 - 362
Target Start/End: Complemental strand, 6462518 - 6462401
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    ||||||||||||||||||||||  ||   ||| ||| ||||||||||||||||||||| |||||||||||  ||||||||||||||||||  ||||||||    
T  6462518 tttcgcaccggtttccaacccactaataatggtcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaac 6462419  T
Q  345 ccggtattccccagatac 362  Q
    ||||||||||||||||||    
T  6462418 ccggtattccccagatac 6462401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 7650334 - 7650223
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||||||||| ||||| ||| ||| ||||||||||| ||||||||||||| || ||||  |||| ||||||| ||||||||||||||    
T  7650334 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaa 7650235  T
Q  344 cccggtattccc 355  Q
    ||||||||||||    
T  7650234 cccggtattccc 7650223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 45877561 - 45877443
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||||||| | || |||| ||||||||||||||||||||| |||| ||||||  |||| ||||||  ||||||||||||||    
T  45877561 ctttcgcaccggtttccgacccatcaatggtgaacgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaa 45877462  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  45877461 cccggtattccccggatac 45877443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 47219251 - 47219133
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||| ||||||||||   |||||||||||  || ||| |||||||    
T  47219251 ctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaa 47219152  T
Q  344 cccggtattccccagatac 362  Q
    || |||||||||| |||||    
T  47219151 cctggtattccccggatac 47219133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 31072985 - 31072876
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||||||| | ||||| ||||||||||||| || || ||||||||| |||| ||||||| |||||||||||| ||||||||||||||    
T  31072985 ctttcgcaccggtttccaacctaccaaaggtggacgattaatctgggtcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 31072886  T
Q  344 cccggtattc 353  Q
    || |||||||    
T  31072885 cctggtattc 31072876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 53649833 - 53649722
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| | ||||||||| || |||| |||||||||||||||||||||||| ||||||||  |||| ||||||| |||||  ||||||||    
T  53649833 tttcgcaccggtttccgatccatcaaaggtgaacgactaatccggctcatgcgtagagacaggcgcactggccaagtgttgttcaccctgagaatcgaac 53649734  T
Q  345 ccggtattcccc 356  Q
    ||||||||||||    
T  53649733 ccggtattcccc 53649722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 29136020 - 29135902
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| |||||||||||||||| ||| | |||| || ||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  29136020 ctttcgtaccggtttccaacccaccaatggtggaagactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29135921  T
Q  344 cccggtattccccagatac 362  Q
     |||||||||||| |||||    
T  29135920 tccggtattccccggatac 29135902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 54237555 - 54237437
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  || | ||||||| | |||||||||||||||||||||||||||||||| |||| ||||||||||||| |||||||     
T  54237555 ctttcgcaccggtttccgacccactaatggtggacgacttatccggctcatgcgtagagacatgcgcactgaccaagtgttgttctccctgaaaatcgac 54237456  T
Q  344 cccggtattccccagatac 362  Q
    |||| |||| ||| |||||    
T  54237455 cccgatatttcccggatac 54237437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 54261333 - 54261219
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||||| |||||||||||  ||||||||||||  ||| | |||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 54261234  T
Q  344 cccggtattccccag 358  Q
    |||||||||||||||    
T  54261233 cccggtattccccag 54261219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 353
Target Start/End: Original strand, 45450444 - 45450555
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||||||||||||||| |||||||| ||||||| |||||  ||| |||||||||| ||||||||||| |||||| |||||| |||||||||||    
T  45450444 tttctttcgcaccggtttccaactcatcaaaggtggacgactaatctagcttatgcgtagaggcatgcgcactggtcaagcattgttc-ccctggaaatc 45450542  T
Q  341 gaacccggtattc 353  Q
     ||||| ||||||    
T  45450543 aaacccagtattc 45450555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 23511674 - 23511564
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||||||||||| ||||||||||||||| ||||||||||||| ||||||||||| |||| ||||| || || ||  |||||||    
T  23511674 ctttcgcaccggttttcgacccatcaaaggtggacgattaatccgactcatgcgtagaggcatgcgcactggtcaaacgttgctccccttgtgaatcgaa 23511575  T
Q  344 cccggtattcc 354  Q
    |||| ||||||    
T  23511574 cccgatattcc 23511564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 357
Target Start/End: Complemental strand, 30045928 - 30045815
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||  |||| | ||||||||||| ||||||| ||||| | ||| |||||||||||||||||||||  |||||||||||| |||| | |||||||    
T  30045928 ctttcgcactagtttacgacccatcaaaggtggacgactaatcagactcgtgcgtagagacatgcgcactggccaagcgttgttccccctaggaatcgaa 30045829  T
Q  344 cccggtattcccca 357  Q
    ||||||||||||||    
T  30045828 cccggtattcccca 30045815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 51060281 - 51060398
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| |||||| | |||||||||||| |||||||||||| |||| ||||||| |||||  |||||||    
T  51060281 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagttcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgagaatcgaa 51060380  T
Q  344 cccggtattccccagata 361  Q
    |||| |||||||| ||||    
T  51060381 cccgatattccccggata 51060398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 3136694 - 3136805
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||| | ||||| ||||||| ||||||| ||||||||||||| |||||||||||  |||| ||||||| ||||| ||||||||    
T  3136694 ctttcgcaccggtttccgaccaaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactgcccaagtgttgttc-ccctgaaaatcgaa 3136792  T
Q  344 cccggtattcccc 356  Q
     ||||||||||||    
T  3136793 tccggtattcccc 3136805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 13894033 - 13893921
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | | ||| ||||| ||| ||| ||||||||||| || |||||| |||||||| ||| |||||||||||| ||||||||||| ||    
T  13894033 ctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaa 13893934  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  13893933 cccggtattcccc 13893921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 25295067 - 25294949
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||||||||| ||| | ||||||| ||||||||||||||| ||||| |||||||||||  |||| ||||||  ||| |  |||| ||    
T  25295067 ctttcgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaa 25294968  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  25294967 cccggtattccccggatac 25294949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 30767247 - 30767361
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||  |||||| ||||| ||||| ||| ||| ||||||||||| ||||||||| ||||| |||||  |||| ||||||| ||||||||||||||    
T  30767247 ctttcgcactagtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaa 30767346  T
Q  344 cccggtattccccag 358  Q
    |||| ||||||||||    
T  30767347 cccgatattccccag 30767361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 35998571 - 35998679
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  |||||  |||| ||||||||||||||  ||| ||||||||| |||| ||||||||||||||||||| ||||| |||||| ||    
T  35998571 ctttcgcaccggtttctgacccactaaaggtggacgattaatccaactcgtgcgtagaggcatgtgcactgatcaagcgttgtt-tccctcgaaatcaaa 35998669  T
Q  344 cccggtattc 353  Q
    ||||||||||    
T  35998670 cccggtattc 35998679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 7328950 - 7328843
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||||| ||||| ||| ||| |||||||||||||||||| || |||||||||||  |||| ||||||| |||||| |||||||    
T  7328950 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgta-aggcatgcgcactggccaagtgttgttccccctgggaatcgaa 7328852  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  7328851 cccggtatt 7328843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 248 - 356
Target Start/End: Complemental strand, 10040659 - 10040552
Alignment:
Q  248 cgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccg 347  Q
    ||||||||||||||||||| ||||| |||||||  | |||||||| ||||||||| |||||||||||  |||||||||||| |||||  |||||||||||    
T  10040659 cgcaccggtttccaacccaccaaaggtggacgaccattccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc-ccctgagaatcgaacccg 10040561  T
Q  348 gtattcccc 356  Q
     ||||||||    
T  10040560 atattcccc 10040552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 28572211 - 28572323
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||| ||||||||| |||||  ||||  |||||||||||  |||||| |||||||    
T  28572211 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaa 28572310  T
Q  344 cccggtattcccc 356  Q
    ||| |||||||||    
T  28572311 cccagtattcccc 28572323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 241 - 353
Target Start/End: Complemental strand, 35316066 - 35315954
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||| |||||||| ||||| ||||  ||| ||| |||||| |||||||||||||| |||||||||||  |||| ||||||| |||||| ||||    
T  35316066 tttctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatc 35315967  T
Q  341 gaacccggtattc 353  Q
    ||||||| |||||    
T  35315966 gaacccgatattc 35315954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 351
Target Start/End: Complemental strand, 26043919 - 26043812
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||| ||||||||  || || ||||| ||  ||| ||||||||||||||||||||| |||||||||||  |||| |||||||||||||| |||||||    
T  26043919 ctttcgccccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaa 26043820  T
Q  344 cccggtat 351  Q
    ||||||||    
T  26043819 cccggtat 26043812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 47471938 - 47471828
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||||| ||||||| |||| |||||||||||||||  ||||||||||   ||||| |||||| |||||| |||||||    
T  47471938 ctttcgcatcggtttccgacccaccaaaggtggacgactaattcggctcatgcgtagaagcatgcgcactagccaagcattgttc-ccctgggaatcgaa 47471840  T
Q  344 cccggtattccc 355  Q
    ||||||||||||    
T  47471839 cccggtattccc 47471828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 274 - 361
Target Start/End: Complemental strand, 49198428 - 49198341
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagata 361  Q
    ||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||| | |||||||||||||||||||| ||||    
T  49198428 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggata 49198341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 257 - 356
Target Start/End: Original strand, 52364813 - 52364912
Alignment:
Q  257 ttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||| ||||||||||| | |||||||||||| |||| ||||||||| ||||||||||| |||||||||||||   |||| |||||||| |||||||||||    
T  52364813 ttccgacccatcaaaggtagacgattaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattcccc 52364912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 3755645 - 3755559
Alignment:
Q  276 gacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||| ||||||||||||||||||||||||||||||||| |||| ||||||||  ||||| |||||||  ||||||||||| |||||    
T  3755645 gacgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatac 3755559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 48342127 - 48342013
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| | ||| ||||| ||||||| ||||| || |||||||||||| ||||||||||   |||||||||||| |||| | ||| |||    
T  48342127 ctttcgcacctgtttccgatccaccaaagatggacgactaatctggttcatgcgtagaggcatgcgcactagccaagcgttgttccccctaggaatagaa 48342028  T
Q  344 cccggtattccccag 358  Q
    |||||||||||||||    
T  48342027 cccggtattccccag 48342013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 247 - 356
Target Start/End: Original strand, 26207804 - 26207913
Alignment:
Q  247 tcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaaccc 346  Q
    |||||||||||||| |||||  ||   ||| ||| ||||||||||||||||||||| ||||| |||||  |||||||||||| || ||| ||||||||||    
T  26207804 tcgcaccggtttccgacccactaataatggccgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaaccc 26207903  T
Q  347 ggtattcccc 356  Q
    ||||||||||    
T  26207904 ggtattcccc 26207913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 245 - 362
Target Start/End: Original strand, 51682955 - 51683072
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||| ||||||| ||||| ||  | ||| ||| ||||||||||| || | |||| ||||||||||| ||||||||||||| |||||| ||||||||    
T  51682955 tttcgcactggtttccgacccaccattggtgggcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaac 51683054  T
Q  345 ccggtattccccagatac 362  Q
    | |||||||||| |||||    
T  51683055 ctggtattccccggatac 51683072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 15320293 - 15320181
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||| ||| ||||||||||| ||||||||| ||||| |||||  ||| | ||||||  ||| |||||||||    
T  15320293 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaa 15320194  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  15320193 cccggtattcccc 15320181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 33251769 - 33251657
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||  |||| | ||||||||||  ||||||| ||||||||||||||||||||| ||||| |||||  ||| |||||||| | | || |||||||    
T  33251769 ctttcgcactcgttttcgacccatcaaatgtggacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaa 33251670  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  33251669 cccggtattcccc 33251657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 245 - 357
Target Start/End: Original strand, 34662320 - 34662432
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    ||||||| |||||||||| |||  |||| ||||||| |||| |||||||||| |||||||||||| ||||| ||| |||| |||  |||| |||||||||    
T  34662320 tttcgcatcggtttccaatccactaaaggtggacgactaattcggctcatgcatagagacatgcgtactgaccaaacgttattcctcctgaaaatcgaac 34662419  T
Q  345 ccggtattcccca 357  Q
    ||| |||||||||    
T  34662420 ccgatattcccca 34662432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 3507534 - 3507644
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| ||||| ||||| ||  ||| ||||||||||| ||||||||| |||||||||||  |||| ||||||| | || | |||| |||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccctctaggaatcaaac 3507633  T
Q  345 ccggtattccc 355  Q
    |||||||||||    
T  3507634 ccggtattccc 3507644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 242 - 356
Target Start/End: Original strand, 29762153 - 29762267
Alignment:
Q  242 ttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcg 341  Q
    ||||||||||||||||||| ||||| ||| | ||||||| |||||| |||||||| ||||| |||||||||||  |||| ||||||  |||||  |||||    
T  29762153 ttctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatcg 29762252  T
Q  342 aacccggtattcccc 356  Q
     ||||| ||||||||    
T  29762253 gacccgatattcccc 29762267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 37319886 - 37319972
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    ||||||||||||| |||||||||||||||| | |||||||||||| | |||| ||||||||| ||||| ||||  ||||||||||||    
T  37319886 tttctttcgcaccagtttccaacccatcaacggtggacgattaattcagctcgtgcgtagaggcatgcacacttgtcaagcgttgtt 37319972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 49021203 - 49021273
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| |||||||||||    
T  49021203 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactg 49021273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 41630512 - 41630620
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| |||| |||||| ||| | ||||| ||| ||| |||||||||||||| |||||| |||||||||||  |||||||||||| || ||| ||| |||    
T  41630512 ctttcacaccagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaa 41630611  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  41630612 cccggtatt 41630620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 42412812 - 42412892
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||||||||||||||| |||| |||||   |||||||||||| ||| || |||||||||||||||||||| |||||    
T  42412812 taatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatac 42412892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 32873573 - 32873660
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||| ||| ||| ||||| ||||||| ||||||| |||| |||||| |||||||||||||||||| | ||||||||| |||||||||    
T  32873573 caaaggtgggcgactaatctggctcatacgtagaggcatgtgcactggtcaagcgttgttctccctaggaatcgaacctggtattccc 32873660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 355
Target Start/End: Original strand, 47749105 - 47749215
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||| | ||||| ||| ||| |||| |||||| ||||||||| |||||||||||  |||| ||||||| |||| | |||||||    
T  47749105 ctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttc-ccctaggaatcgaa 47749203  T
Q  344 cccggtattccc 355  Q
    ||||||||||||    
T  47749204 cccggtattccc 47749215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 7310703 - 7310813
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||||| ||  ||| ||||||||||| ||||||||| ||||| ||| |  |||| ||||||| | |||| |||||||    
T  7310703 ctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaa 7310802  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  7310803 cccggtattcc 7310813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 26361967 - 26362077
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||||||||| ||||||||||| ||  ||| ||||||||||| ||||||||| ||||| |||||| ||| |||||||| || ||| |||| ||    
T  26361967 ctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccttgggaatcaaa 26362066  T
Q  344 cccggtattcc 354  Q
    || | ||||||    
T  26362067 cctgatattcc 26362077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 357
Target Start/End: Complemental strand, 10855490 - 10855378
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| || ||| ||||||| ||||| ||| ||| |||| ||| || ||||||||| |||||| ||||  |||||||||||| ||||||||||| ||    
T  10855490 ctttcgcatcgattttcaacccaacaaagatgg-cgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaa 10855392  T
Q  344 cccggtattcccca 357  Q
    ||||||||| ||||    
T  10855391 cccggtatttccca 10855378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 249 - 346
Target Start/End: Original strand, 50405608 - 50405705
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaaccc 346  Q
    |||||||||||| ||||| ||| | ||| ||| ||||||| ||| ||||||||| ||||||||||| ||||||||||||  |||| | ||||||||||    
T  50405608 gcaccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtttcccctcggaatcgaaccc 50405705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 15795494 - 15795605
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||| | ||||| ||  | ||| ||| |||| | |||| ||||||||| |||||||||||| |||||||||||| |||||| |||||||    
T  15795494 cttttgcaccggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttc-ccctgggaatcgaa 15795592  T
Q  344 cccggtattcccc 356  Q
    | |||||||||||    
T  15795593 ctcggtattcccc 15795605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 348
Target Start/End: Original strand, 24506648 - 24506751
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||||| ||||| ||| | ||  ||| ||||| | ||||||||||||| |||| |||||| |||||||||||| |||||| ||||||||    
T  24506648 cttttgcaccggtttccgacccaccaatggtgagcgactaatctgactcatgcgtagaggcatgtgcactggtcaagcgttgtt-tccctgaaaatcgaa 24506746  T
Q  344 cccgg 348  Q
    |||||    
T  24506747 cccgg 24506751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 249 - 361
Target Start/End: Original strand, 40660332 - 40660444
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||| | ||||| ||||| || | ||||||||||| |||||||||||| |||||||||||| |||  |||||||  ||| | ||||||| ||||    
T  40660332 gcaccggttttcgacccaccaaaggtgaatgattaatccggttcatgcgtagaggcatgcgcactgaccaaatgttgttcctcctaggaatcgaatccgg 40660431  T
Q  349 tattccccagata 361  Q
    |||| ||| ||||    
T  40660432 tatttcccggata 40660444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 928707 - 928596
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| ||| | || || ||||| |||| || ||||||||||| ||||||| | ||||||||||| ||||| ||||||| |||||  |||||||    
T  928707 ctttcgcaccgattttcgactcaccaaaggtggatgactaatccggctcgtgcgtagcggcatgcgcactggtcaagtgttgttccccctgagaatcgaa 928608  T
Q  344 cccggtattccc 355  Q
     | |||||||||    
T  928607 tctggtattccc 928596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 246 - 345
Target Start/End: Complemental strand, 4638259 - 4638160
Alignment:
Q  246 ttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacc 345  Q
    |||||| |||||||| |||||| |||| ||| | | ||||||||||| |||||||||  |||||||||| ||||||||||||   ||||| |||||||||    
T  4638259 ttcgcatcggtttccgacccattaaaggtgggctactaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaacc 4638160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 8164636 - 8164546
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccag 358  Q
    ||||| ||| ||| ||||||| ||| |||||| || |||||||||||  |||||||||||| || | ||||| ||||||||||||||||||    
T  8164636 caaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttccccttagaaattgaacccggtattccccag 8164546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 343
Target Start/End: Complemental strand, 19147071 - 19146969
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||||| ||||| ||||| ||||||| |||||| |||| ||| |||||  || | |||||  ||||||||||||  |||| |||||    
T  19147071 tttctttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcgtgcatagagggatacacactggccaagcgttgttcctcctgaaaatc 19146972  T
Q  341 gaa 343  Q
    |||    
T  19146971 gaa 19146969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 249 - 362
Target Start/End: Complemental strand, 33689053 - 33688940
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||||||||||| ||| | |||| || ||| | ||||||||||||||| |||||||||||  |||| ||| ||| || | | ||| |||||||     
T  33689053 gcaccggtttccaacccaccaatggtggatgactaaactggctcatgcgtagaggcatgcgcactggccaagtgttattccccttaggaattgaacccga 33688954  T
Q  349 tattccccagatac 362  Q
    |||||||| |||||    
T  33688953 tattcccccgatac 33688940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 245 - 357
Target Start/End: Original strand, 2029268 - 2029380
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||| ||||| | ||||||||| | ||| ||| |||||| |||||||||||||| |||||| ||| | |||||||||||   |||| ||||||||     
T  2029268 tttcgcactggtttgcgacccatcaatggtgggcgactaatccagctcatgcgtagaggcatgcgtactaaccaagcgttgtttctcctgaaaatcgaat 2029367  T
Q  345 ccggtattcccca 357  Q
     || |||||||||    
T  2029368 tcgttattcccca 2029380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 13367531 - 13367447
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||||| ||||| ||| | | |  || |||||||||||||||||| || ||||| |||||| ||||||||||||    
T  13367531 ctttcgcaccggtttcctacccaacaacggtaggtgactaatccggctcatgcgtaaaggcatgcacactgaccaagcgttgttc 13367447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 292
Target Start/End: Complemental strand, 21325171 - 21325123
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctc 292  Q
    ||||||||||||||||| ||||||||||| ||| |||||||||||||||    
T  21325171 ctttcgcaccggtttccgacccatcaaagatgggcgattaatccggctc 21325123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 55069679 - 55069763
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||| |||||||||||| ||||| ||||| ||  ||||||||||||||| ||||||||| |||| ||||||  ||| ||||||||    
T  55069679 cttttgcaccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttc 55069763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 43330732 - 43330815
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    |||||| ||||||||   ||||| ||||| ||| ||| ||||||||||| ||||||||| ||||||||||| ||||| ||||||    
T  43330732 ctttcgtaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgtt 43330815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 49543626 - 49543515
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| ||| |||||| |||||  |||| ||| ||| |||| |||||| ||||||||| ||||| |||||| ||| |||||||| || ||  |||||||    
T  49543626 ctttcgtaccagtttccgacccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcacactgaccaaacgttgttccccatgagaatcgaa 49543527  T
Q  344 cccggtattccc 355  Q
    |||| |||||||    
T  49543526 cccgatattccc 49543515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 8362682 - 8362572
Alignment:
Q  246 ttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacc 345  Q
    ||||||||||||||  | |||  |||| ||||||| ||||  ||||||||||||||| |||||| ||||  ||| |||||||  | |||| ||| |||||    
T  8362682 ttcgcaccggtttcggatccactaaaggtggacgactaatttggctcatgcgtagaggcatgcggactggccaaacgttgtttccactgggaattgaacc 8362583  T
Q  346 cggtattcccc 356  Q
    |||||||||||    
T  8362582 cggtattcccc 8362572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 22909890 - 22909773
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||| ||||||||||| || |||| |||| |||||||||||||||   |||||||||   | |||||||||| | |||  |||||||    
T  22909890 ctttcgcactggtttccgacccatcaaaggtgcacgactaattcggctcatgcgtagaagtatgcgcactagcctagcgttgttc-ctctgagaatcgaa 22909792  T
Q  344 cccggtattccccagatac 362  Q
    |||| ||||| || |||||    
T  22909791 cccgatattctccggatac 22909773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 26923261 - 26923371
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| |||   ||||| ||||||||| ||| || ||| |  |||||||||||||||| ||||||| |||||  ||||||||    
T  26923261 ctttcgcaccggtttctgacccaccaataatggacaattaatccgactcgtgtgtatatgcatgcgcactgatcaaacgttgttttccctaaaaatcgaa 26923360  T
Q  344 cccggtattcc 354  Q
     ||| ||||||    
T  26923361 tccgatattcc 26923371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Complemental strand, 49082871 - 49082813
Alignment:
Q  304 catgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||||||||||   |||||||||||||||||| |||||||| ||||||||||| |||||    
T  49082871 catgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatac 49082813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 278 - 355
Target Start/End: Complemental strand, 7139825 - 7139748
Alignment:
Q  278 cgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    |||||||||| |||| |||||||||| |||  ||||| ||||| | ||||| | |||| |||||||||||||||||||    
T  7139825 cgattaatccagctcgtgcgtagagatatgtacactggtcaagtgatgttccctctgggaatcgaacccggtattccc 7139748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 256 - 361
Target Start/End: Original strand, 24146340 - 24146445
Alignment:
Q  256 tttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||| ||||||||| | ||||||| |||| |||||||||  ||||| |||||| | ||| |||| |||||| ||| ||  |||| |||||| |||||||    
T  24146340 tttccgacccatcaatggtggacgactaattcggctcatgtctagaggcatgcgtattgaccaagtgttgttatccttgagaatcaaacccgatattccc 24146439  T
Q  356 cagata 361  Q
    ||||||    
T  24146440 cagata 24146445  T

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Target: chr3; HSP #69
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 249 - 358
Target Start/End: Original strand, 35923628 - 35923737
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||| | | ||||||||| ||||||| |||| || ||| ||| ||||| |||||||||||  ||| |||||||| ||||   ||||||||| ||    
T  35923628 gcaccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttccccctatgaatcgaacctgg 35923727  T
Q  349 tattccccag 358  Q
    ||||| ||||    
T  35923728 tattctccag 35923737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 39849140 - 39849076
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccg 347  Q
    ||||||||||||||||||||| ||||| |||||  |||||||||||| | |||| |||||||||||    
T  39849140 taatccggctcatgcgtagaggcatgcacactggccaagcgttgttc-ctctgggaatcgaacccg 39849076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 255 - 356
Target Start/End: Original strand, 45402362 - 45402463
Alignment:
Q  255 gtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    |||||| |||||  |||| || |||| ||||||||||||||||||||| ||||||||| |  | || ||||||| | || | ||||||||||| ||||||    
T  45402362 gtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcacaggccgagtgttgttccctctaggaatcgaacccgatattcc 45402461  T
Q  355 cc 356  Q
    ||    
T  45402462 cc 45402463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #72
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 3763127 - 3763040
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||| |||||| | || ||||||||||||||| |||||| |||||||||||| | |||  ||||||| |||||||| ||| |||||    
T  3763127 tggacgactaatccagttcgtgcgtagagacatgcacactgaccaagcgttgttc-ctctgtgaatcgaatccggtatttcccggatac 3763040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #73
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Original strand, 7612999 - 7613039
Alignment:
Q  317 caagcgttgttctccctggaaatcgaacccggtattcccca 357  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  7612999 caagcgttgttccccctgggaatcgaacccggtattcccca 7613039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #74
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 262 - 334
Target Start/End: Complemental strand, 7648829 - 7648757
Alignment:
Q  262 acccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctg 334  Q
    ||||| ||||| ||| ||| ||||||||||| |||||||||  |||||||||| |||| |||||||| |||||    
T  7648829 acccaacaaaggtgggcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttccccctg 7648757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #75
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 300
Target Start/End: Original strand, 36043674 - 36043730
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtag 300  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||| |||||||    
T  36043674 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtag 36043730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #76
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 276 - 352
Target Start/End: Original strand, 47303521 - 47303597
Alignment:
Q  276 gacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    ||||| |||||||||||||| |||||| |||| ||||||| |||| |||||||  ||||| |||| |||||| ||||    
T  47303521 gacgactaatccggctcatgtgtagaggcatgtgcactgaccaagtgttgttcctcctgggaatcaaacccgatatt 47303597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #77
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 304 - 355
Target Start/End: Complemental strand, 5549343 - 5549292
Alignment:
Q  304 catgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    |||||||| || ||||||||||||||  ||||||||||||||| ||||||||    
T  5549343 catgcgcattggtcaagcgttgttcttactggaaatcgaacccagtattccc 5549292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #78
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 254 - 325
Target Start/End: Complemental strand, 32522076 - 32522005
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttg 325  Q
    ||||||| ||||||||||| ||||||| ||||| | |||||||||| | |||||||||| | ||||| ||||    
T  32522076 ggtttccgacccatcaaaggtggacgactaatctgactcatgcgtaaatacatgcgcaccggtcaagtgttg 32522005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #79
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 34374442 - 34374525
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    ||||| ||||||||||| ||||| |||||  || ||| ||||||| || |||||| ||| |||||||||||| |||| ||||||    
T  34374442 ctttcacaccggtttccgacccaccaaagaagggcgactaatccgacttatgcgttgaggcatgcgcactgaccaagtgttgtt 34374525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #80
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 311
Target Start/End: Complemental strand, 44064651 - 44064584
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgca 311  Q
    |||| |||||||||||| ||||| ||||| ||  ||| |||||||| |||||||||||| ||||||||    
T  44064651 cttttgcaccggtttccgacccaccaaaggtgagcgactaatccggttcatgcgtagaggcatgcgca 44064584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #81
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 346
Target Start/End: Original strand, 26590266 - 26590368
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||| ||||   |  |||||||||  |||| || |||||| ||||| |||||| |||||||||||| |||||  |||||||    
T  26590266 ctttcgcaccggtttccgatccaccaaatacgatcgattaatctagctcgtgtgtagaggcatgcacactgaccaagcgttgttccccctgagaatcgaa 26590365  T
Q  344 ccc 346  Q
    |||    
T  26590366 ccc 26590368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #82
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 286 - 363
Target Start/End: Complemental strand, 6286189 - 6286113
Alignment:
Q  286 ccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatact 363  Q
    |||||| ||| |||||| ||||||||||| ||||| |||||||   |||||||||||| | |||||||||| ||||||    
T  6286189 ccggcttatgtgtagaggcatgcgcactg-tcaagtgttgttccttctggaaatcgaatctggtattcccctgatact 6286113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #83
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 246 - 291
Target Start/End: Complemental strand, 50682570 - 50682525
Alignment:
Q  246 ttcgcaccggtttccaacccatcaaagttggacgattaatccggct 291  Q
    ||||||||||||||||||| ||||| | ||||||| ||||||||||    
T  50682570 ttcgcaccggtttccaacctatcaatggtggacgactaatccggct 50682525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #84
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 358
Target Start/End: Original strand, 11687155 - 11687223
Alignment:
Q  290 ctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccag 358  Q
    ||||| ||||||| |||||||||||  ||||| |||||| |||||  |||| |||||||||||| ||||    
T  11687155 ctcatacgtagaggcatgcgcactggccaagcattgttccccctgagaatcaaacccggtattctccag 11687223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #85
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 289 - 353
Target Start/End: Complemental strand, 40944945 - 40944881
Alignment:
Q  289 gctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    |||||||||||||| |||||  |||| | ||| ||||||| |||||| |||||||| ||||||||    
T  40944945 gctcatgcgtagaggcatgcatactggttaagtgttgttccccctgggaatcgaactcggtattc 40944881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #86
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 346
Target Start/End: Complemental strand, 50682522 - 50682482
Alignment:
Q  306 tgcgcactgatcaagcgttgttctccctggaaatcgaaccc 346  Q
    |||||||||  ||||||||||||||||| ||||||||||||    
T  50682522 tgcgcactggccaagcgttgttctccctagaaatcgaaccc 50682482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 79; Significance: 8e-37; HSPs: 74)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 79; E-Value: 8e-37
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 42086435 - 42086325
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||||||| |||||| |||||||    
T  42086435 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaa 42086336  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  42086335 cccggtattcc 42086325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 1538539 - 1538427
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  1538539 ctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 1538440  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  1538439 cccggtattcccc 1538427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 9805112 - 9805003
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||  |||||||||||| |||||| |||||||    
T  9805112 ctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 9805013  T
Q  344 cccggtattc 353  Q
    ||||||||||    
T  9805012 cccggtattc 9805003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 240 - 352
Target Start/End: Original strand, 11845796 - 11845908
Alignment:
Q  240 ctttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaat 339  Q
    ||||||||| ||||||||||||||||||||||| ||| |||||||| |||||||| ||||||| |||||||||||  ||| |||||||| |||| |||||    
T  11845796 ctttctttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaat 11845895  T
Q  340 cgaacccggtatt 352  Q
    |||||||| ||||    
T  11845896 cgaacccgatatt 11845908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 362
Target Start/End: Original strand, 14588614 - 14588734
Alignment:
Q  242 ttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcg 341  Q
    ||||||||||||||||| |  | || ||||| ||||||| ||||||||||||||||||||| ||||||||||| ||||||||| |||  |||| ||||||    
T  14588614 ttctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcg 14588713  T
Q  342 aacccggtattccccagatac 362  Q
    |||||| ||||||||||||||    
T  14588714 aacccgatattccccagatac 14588734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 20682616 - 20682728
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||||||||||  |||| ||| ||||||||||||||| ||||||||| |||||||||||  |||||||||||| ||||||||||| ||    
T  20682616 ctttcgcaccggtttccaacccactaaaggtggtcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaa 20682715  T
Q  344 cccggtattcccc 356  Q
    |||  ||||||||    
T  20682716 cccaatattcccc 20682728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 19572832 - 19572714
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||||||||| ||| | || |||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| |||| ||    
T  19572832 ctttcgcactggtttccaacccaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaa 19572733  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  19572732 cccggtattccccggatac 19572714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 23383765 - 23383655
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||| ||||| ||||||| |||||| |||||||||||||| || ||||||||  |||||||||||| |||||| |||||||    
T  23383765 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 23383666  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  23383665 cccggtattcc 23383655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 41801085 - 41800967
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||| ||||| ||||||||||| || |||| ||||||||||| |||||||||||||||||| || ||||||||||||| || ||  |||||||    
T  41801085 ctttcacaccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttccccttgagaatcgaa 41800986  T
Q  344 cccggtattccccagatac 362  Q
    |||| ||||||||||||||    
T  41800985 cccgatattccccagatac 41800967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 333
Target Start/End: Complemental strand, 24875456 - 24875364
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccct 333  Q
    |||||||||||  | ||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||| |||| |||||||||||||    
T  24875456 tttctttcgcattgatttccgacccatcaaaggtggacgattaatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctccct 24875364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 40117523 - 40117411
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | | ||| ||||| || |||||||||||||||||||||||||| |||||||||||  |||||||||||| ||||||||||||||    
T  40117523 ctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T
Q  344 cccggtattcccc 356  Q
      || ||||||||    
T  40117423 ttcgatattcccc 40117411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 42291505 - 42291613
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| | ||||||||| ||||||| ||||||||||| ||||||||| |||| ||||||  |||||||||||| |||||| |||| |||    
T  42291505 tttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttcaccctgggaatcaaac 42291604  T
Q  345 ccggtattc 353  Q
    |||||||||    
T  42291605 ccggtattc 42291613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 38897718 - 38897835
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||| | ||| ||||| ||| | | ||||||||||| ||||||||| |||||||||||  |||||||||||| ||||||||||||||    
T  38897718 ctttcgcactggtttccgatccaccaaaggtgggcaactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc-ccctggaaatcgaa 38897816  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||||||| ||||    
T  38897817 cccggtattccccatatac 38897835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 5731919 - 5732031
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  |||| || |||| ||||| ||||||| ||||||| |||||||||||  ||||||||||||  ||||| |||||||    
T  5731919 ctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5732018  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  5732019 cccggtattcccc 5732031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 41163459 - 41163570
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| |||||  |||| ||||||| |||||| ||||||||||||||||||| ||||||  ||| |||||||| |||||| |||||||    
T  41163459 ctttcgcaccagtttccgacccacaaaaggtggacgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttc-ccctgggaatcgaa 41163557  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  41163558 cccggtattcccc 41163570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 276 - 354
Target Start/End: Complemental strand, 7336696 - 7336618
Alignment:
Q  276 gacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    ||||||||||||||||| ||||||||| ||||||||||||| |||||||||||||| | ||||||||||||| ||||||    
T  7336696 gacgattaatccggctcgtgcgtagaggcatgcgcactgataaagcgttgttctccttagaaatcgaacccgatattcc 7336618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 13664368 - 13664250
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| || || ||||| ||  ||||||||| ||||||||||||||| |||||||||||  |||| ||||||| |||||  |||||||    
T  13664368 ctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaa 13664269  T
Q  344 cccggtattccccagatac 362  Q
     ||||||||||| ||||||    
T  13664268 tccggtattccctagatac 13664250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 357
Target Start/End: Complemental strand, 14728191 - 14728077
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgt-tctccctggaaatcga 342  Q
    ||||||||||||||||| ||||||||||| ||  | | ||||||||||||||||||||| |||||||||||| ||||||||||  | ||||| |||||||    
T  14728191 ctttcgcaccggtttccgacccatcaaaggtgagcaactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgtccccccctgaaaatcga 14728092  T
Q  343 acccggtattcccca 357  Q
    | |||||||| ||||    
T  14728091 atccggtatttccca 14728077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 23247351 - 23247464
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||| ||||||| ||||||| ||||| ||||| ||||||||| |||||  ||||||||||||||||||  ||||| |||||||    
T  23247351 ctttcgcaccggttttcgacc-atcaaaggtggacgactaatctggctcgtgcgtagaggcatgcatactgatcaagcgttgttcctcctgggaatcgaa 23247449  T
Q  344 cccggtattccccag 358  Q
    |||| ||||||||||    
T  23247450 cccgatattccccag 23247464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 24499090 - 24498973
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||  ||||||||||| ||||| ||||| ||||||||||||| | ||||||| ||||||||||||||||||||| || | | | |||||||||    
T  24499090 ctttcgcaccaatttccaacccaccaaagatggactattaatccggctcgtacgtagaggcatgcgcactgatcaagcgttatt-ttcttagaaatcgaa 24498992  T
Q  344 cccggtattccccagatac 362  Q
    |||| ||||| ||||||||    
T  24498991 cccgatattctccagatac 24498973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 24653811 - 24653928
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||| | ||||| ||| | |||||||||||||||||| ||||||||||  ||||||||||| |||| ||||||||||||| ||||||||    
T  24653811 ctttcgcatcggttttcgacccaccaatggtggacgattaatccggct-atgcgtagaggtatgcgcactgaccaagtgttgttctccctgaaaatcgaa 24653909  T
Q  344 cccggtattccccagatac 362  Q
    |||  |||||||| |||||    
T  24653910 ccctatattccccggatac 24653928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 42861217 - 42861334
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccct-ggaaatcga 342  Q
    ||||||||||||| ||| ||||| ||| | ||||||||||||||||||||||||||||| |||||||||||  |||| |||||| ||||| |||||| ||    
T  42861217 ctttcgcaccggtctccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtt-tccctgggaaattga 42861315  T
Q  343 acccggtattccccagata 361  Q
    ||||| |||||||| ||||    
T  42861316 acccgatattccccggata 42861334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 245 - 362
Target Start/End: Complemental strand, 20525945 - 20525828
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| | ||| ||| | ||||||| ||||||||||||||||||||| |||||||||||   ||| |||||||  ||||| ||||||||    
T  20525945 tttcgcaccggtttccgatccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaac 20525846  T
Q  345 ccggtattccccagatac 362  Q
    ||| |||||||| |||||    
T  20525845 ccgatattccccggatac 20525828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 8513627 - 8513515
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||||| ||||| ||||||||| |||| ||||||  ||||| |||||  |||| | |||||||    
T  8513627 ctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaa 8513528  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  8513527 cccggtattcccc 8513515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 12705122 - 12705010
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||| ||| |||||||| |||||||||||  ||||| ||||| |||||||||||||  ||| | |||||||    
T  12705122 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 12705023  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  12705022 cccggtattcccc 12705010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 240 - 356
Target Start/End: Original strand, 25417178 - 25417294
Alignment:
Q  240 ctttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaat 339  Q
    ||||||||||||||||||||  ||||| ||| | |  | || ||||||||||| | ||||||| |||||||||||  |||||||||||| |||||| |||    
T  25417178 ctttctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaat 25417277  T
Q  340 cgaacccggtattcccc 356  Q
    |||||||||||||||||    
T  25417278 cgaacccggtattcccc 25417294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 18136275 - 18136397
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacga----ttaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaat 339  Q
    |||| |||||||||||| ||||| ||| | |||||||    ||||||||||||||| |||||| ||||| |||||| |||| ||||||| |||||| |||    
T  18136275 cttttgcaccggtttccgacccaccaatggtggacgactaattaatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaat 18136374  T
Q  340 cgaacccggtattccccagatac 362  Q
    |||||||||||||| || |||||    
T  18136375 cgaacccggtattctccggatac 18136397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 9812980 - 9812868
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||| ||| |||||||| |||||||||||  ||||| |||||  ||||||||||||  ||| | |||||||    
T  9812980 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaa 9812881  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  9812880 cccggtattcccc 9812868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 18262617 - 18262729
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| ||| | | |||||| || ||| ||| ||||||||||| || ||||||  |||||||||| ||||||||||||| ||||| |||| |||    
T  18262617 ctttcgcaccgattttcgatccatcagaggtgggcgactaatccggctcgtgtgtagaggtatgcgcactggtcaagcgttgttccccctgaaaatagaa 18262716  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  18262717 cccggtattcccc 18262729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 253 - 356
Target Start/End: Complemental strand, 15034174 - 15034071
Alignment:
Q  253 cggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||||| | ||||||||| ||||| | ||||| ||||||||||||||| ||||| |||||| |||| ||||||  || ||||||| ||||||||||||    
T  15034174 cggtttccgatccatcaaaggtggacaactaatcaggctcatgcgtagaggcatgcacactgaccaagtgttgtttcccatggaaattgaacccggtatt 15034075  T
Q  353 cccc 356  Q
    ||||    
T  15034074 cccc 15034071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 18294493 - 18294591
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||| ||||| ||||| ||| |||||||||||| ||||| ||||||  ||||||||||| |||||||||||| ||||||| || |||||||||||||    
T  18294493 ggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttc-ccctggatattgaacccggtattc 18294591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 245 - 356
Target Start/End: Complemental strand, 37263347 - 37263237
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| | |||  |||| ||||||| ||||||||||| ||||||||| |||||||| ||  |||||||||||| |||||  ||||||||    
T  37263347 tttcgcaccggtttccgatccaataaaggtggacgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttc-ccctgagaatcgaac 37263249  T
Q  345 ccggtattcccc 356  Q
    ||| ||||||||    
T  37263248 ccgatattcccc 37263237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 3653913 - 3654020
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||| | | ||| ||||| ||||||| ||||||| ||| ||||||||| ||||||||||| ||||||||||||||  || | |||||||    
T  3653913 cttttgcaccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttct--ctaggaatcgaa 3654010  T
Q  344 cccggtattc 353  Q
    ||||||||||    
T  3654011 cccggtattc 3654020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 264 - 354
Target Start/End: Original strand, 7308383 - 7308473
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    ||||||||| ||  ||| ||||||||||||||||||||| |||| ||||||  |||||||||||| |||||| ||||||||||| ||||||    
T  7308383 ccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgtgcactgcccaagcgttgttccccctgggaatcgaacccgatattcc 7308473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 7866689 - 7866579
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| |||||| |||||| ||||| ||| ||| |||||||| || ||||||||| ||||| |||||  ||||||||||||  ||| | |||||||    
T  7866689 ctttcgcactggtttctaacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 7866590  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  7866589 cccggtattcc 7866579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 12082016 - 12081898
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||| ||||| || || ||||| ||||||| |||| |||||| ||||||||  |||||||||||  |||||||||||| |||||  |||||||    
T  12082016 ctttcacaccgatttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaa 12081917  T
Q  344 cccggtattccccagatac 362  Q
    ||| ||||||||| |||||    
T  12081916 cccagtattccccggatac 12081898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 286 - 356
Target Start/End: Complemental strand, 28857194 - 28857124
Alignment:
Q  286 ccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    ||||||||||||||||| |||||||||||  |||| ||||||| |||||| ||||||||||||||||||||    
T  28857194 ccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattcccc 28857124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 30349687 - 30349569
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||||  |||| | ||| ||||||| |||| | |||||||| ||||| |||||||||||  ||| | |||||| |||| |||||| ||    
T  30349687 ctttcgcaccggtttccggcccacctaaggtggacgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaa 30349588  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  30349587 cccggtattccccggatac 30349569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 241 - 362
Target Start/End: Complemental strand, 18045749 - 18045629
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||| |||||||| | |||  |||| |||||||||||| ||||||||| |||||| |||||| ||  | |||| ||||||| |||||| ||||    
T  18045749 tttctttcgcatcggtttccgatccactaaaggtggacgattaat-cggctcatgtgtagaggcatgcgtaccaaccaagggttgttccccctgggaatc 18045651  T
Q  341 gaacccggtattccccagatac 362  Q
    |||||| ||||||||| |||||    
T  18045650 gaacccagtattccccggatac 18045629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 20255477 - 20255393
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||||||| |||||| || || ||||| ||||||| ||||||| ||||||||||||| ||||||||||| ||||| |||||||    
T  20255477 ctttcgcaccagtttccgactcaccaaaggtggacgactaatccgactcatgcgtagaggcatgcgcactggtcaagtgttgttc 20255393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 245 - 297
Target Start/End: Complemental strand, 40060391 - 40060339
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcg 297  Q
    |||||||||||||||||||||||||| | ||||||||||||||||||||||||    
T  40060391 tttcgcaccggtttccaacccatcaatggtggacgattaatccggctcatgcg 40060339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 267 - 354
Target Start/End: Original strand, 35813020 - 35813107
Alignment:
Q  267 tcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    |||||| ||||||| ||||||| |||||| |||||||||||||||||| |||||| || ||  |||| | ||||||||||||||||||    
T  35813020 tcaaaggtggacgactaatccgactcatgtgtagagacatgcgcactggtcaagcattatttcccctaggaatcgaacccggtattcc 35813107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 5079438 - 5079329
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||| | ||||| ||| ||| ||||||||||| ||||||||  |||||||| ||| |||||| ||||| ||||||||||| |     
T  5079438 ctttcgcaccggttttcgacc-accaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaac 5079340  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  5079339 cccggtattcc 5079329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 334
Target Start/End: Original strand, 39099778 - 39099868
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctg 334  Q
    |||| |||||||||||| ||||| ||||| ||| ||| ||||||||||||||||||||| |||| ||||||  |||| ||||||| |||||    
T  39099778 cttttgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttccccctg 39099868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 354
Target Start/End: Complemental strand, 21149845 - 21149732
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||| |||||| | | ||| ||| | ||| ||| ||||||  ||| ||||||||| ||||||||||| |||| |||||||| ||||| |||||    
T  21149845 tttctttcgcatcggttttctatccaccaatggtgggcgactaatccaactcgtgcgtagagtcatgcgcactggtcaaacgttgttccccctgaaaatc 21149746  T
Q  341 gaacccggtattcc 354  Q
    ||||| ||||||||    
T  21149745 gaacctggtattcc 21149732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 12766239 - 12766127
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||| ||| ||||| || |||||||||||| ||||| |||||  ||||| ||||||  |||   |||||||    
T  12766239 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatctggttcatgcgtagaggcatgcacactggccaagcattgttcctcctcagaatcgaa 12766140  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  12766139 cccggtattcccc 12766127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 21375459 - 21375375
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||| ||||||| | ||||||||| ||||||| ||||||| ||||||||||||  ||||||||||| ||||  |||||||    
T  21375459 ctttcgcactggtttccgatccatcaaagatggacgactaatccgactcatgcgtagaagcatgcgcactggtcaaatgttgttc 21375375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 38369807 - 38369696
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| |||| |||||||||||| |||   | ||||||| ||| ||||||||| |||||||||||  |||| ||||||| |||||  |||||||    
T  38369807 ctttcgcaccgatttctaacccatcaaaggtgggttactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttc-ccctgagaatcgaa 38369709  T
Q  344 cccggtattcccc 356  Q
    |||| ||||||||    
T  38369708 cccgatattcccc 38369696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 282 - 357
Target Start/End: Complemental strand, 30995191 - 30995116
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccca 357  Q
    ||||||||||| ||||||||| ||||||| |||  |||| ||||||| |||||| ||||||||| |||||||||||    
T  30995191 taatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttccccctgggaatcgaacctggtattcccca 30995116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 9168252 - 9168369
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||| ||| | |||||  |||| ||||||| |||||||||||||||||||||  ||||||||||  |||||||||||| | |||| |||||      
T  9168252 cttttgcaccgattttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttc-ctctgggaatcgtt 9168350  T
Q  344 cccggtattccccagatac 362  Q
    | ||||||||||| |||||    
T  9168351 ctcggtattccccggatac 9168369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 264 - 358
Target Start/End: Complemental strand, 14152138 - 14152044
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccag 358  Q
    ||||||| | ||||||||||||||||||||||  ||||  ||||| |||||  |||||||||||| |  ||  ||||||||||||||||||||||    
T  14152138 ccatcaatggtggacgattaatccggctcatggatagaagcatgcacactggccaagcgttgttccctatgagaatcgaacccggtattccccag 14152044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 334
Target Start/End: Complemental strand, 43399236 - 43399146
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctg 334  Q
    ||||||||||||||||| ||| | ||||  ||||||| |||||| |||| ||||||||| |||||||||||  |||||||| ||| |||||    
T  43399236 ctttcgcaccggtttccgaccaaccaaatgtggacgactaatcctgctcgtgcgtagaggcatgcgcactggccaagcgttattccccctg 43399146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 354
Target Start/End: Complemental strand, 20705638 - 20705561
Alignment:
Q  277 acgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    |||||||||| | || |||||||||| |||||||||||| ||| |||||||||||||| |||| ||| ||| ||||||    
T  20705638 acgattaatctgccttatgcgtagaggcatgcgcactgaccaaacgttgttctccctgaaaattgaatccgatattcc 20705561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 325
Target Start/End: Complemental strand, 27484269 - 27484188
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttg 325  Q
    ||||| ||||||||||||||| ||||||| ||||||  |||||||| |||||||||||| |||||  |||| ||||| ||||    
T  27484269 ctttcacaccggtttccaacctatcaaagatggacgtctaatccggttcatgcgtagaggcatgcatactggtcaagtgttg 27484188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 1899049 - 1898997
Alignment:
Q  304 catgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||||||||||  |||||||||||| |||||| ||||||||||||||||||||    
T  1899049 catgcgcactggccaagcgttgttccccctgggaatcgaacccggtattcccc 1898997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 278 - 362
Target Start/End: Complemental strand, 26077215 - 26077131
Alignment:
Q  278 cgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| ||||| ||||||||| |||| ||||||  |||||||||||| | |||| |||||||||  |||||||||| ||||    
T  26077215 cgattaatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatac 26077131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 2485304 - 2485194
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||||||||| ||  ||| ||||||| ||||| ||||||| ||||||||| |  | || ||||||| |||| | |||||||    
T  2485304 ctttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttgttc-ccctaggaatcgaa 2485206  T
Q  344 cccggtattccc 355  Q
    ||| ||||||||    
T  2485205 cccagtattccc 2485194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 241 - 308
Target Start/End: Original strand, 27648421 - 27648488
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgc 308  Q
    ||||||||||| |||||||| | ||| ||||| ||||||| ||||||||||||| ||||||| |||||    
T  27648421 tttctttcgcatcggtttccgatccaccaaagatggacgactaatccggctcatacgtagaggcatgc 27648488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 36783351 - 36783296
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgta 299  Q
    |||| |||||||||||||||||| ||| | ||||||| ||||||||||||||||||    
T  36783351 cttttgcaccggtttccaacccaccaatggtggacgactaatccggctcatgcgta 36783296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 309
Target Start/End: Original strand, 17693339 - 17693405
Alignment:
Q  244 ctttcgcaccggtttccaacccatc-aaagttggacgattaatccggctcatgcgtagagacatgcg 309  Q
    ||||||||||||||||||||||| | ||||  |||||| ||||| ||||||||||||||| ||||||    
T  17693339 ctttcgcaccggtttccaacccaccaaaagacggacgactaatctggctcatgcgtagaggcatgcg 17693405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 253 - 327
Target Start/End: Complemental strand, 28615348 - 28615274
Alignment:
Q  253 cggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    |||||||||||| ||||| | ||||||| |||| |||||| ||||||||  | |||||| |||||||||||||||    
T  28615348 cggtttccaacctatcaacggtggacgactaattcggctcgtgcgtagatgcgtgcgcaatgatcaagcgttgtt 28615274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 302
Target Start/End: Complemental strand, 28857254 - 28857196
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagag 302  Q
    ||||||||||||||||| ||||| ||||| ||  ||| |||||||||||||||||||||    
T  28857254 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagag 28857196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 345
Target Start/End: Original strand, 24463885 - 24463986
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||| | |||||  |||| ||| ||| ||||||||||| ||| ||||| |||||||||||  ||| |||||||| || || ||||||||    
T  24463885 cttttgcaccggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttcgccttgaaaatcgaa 24463984  T
Q  344 cc 345  Q
    ||    
T  24463985 cc 24463986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #64
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 4016254 - 4016362
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||| ||||| ||| | ||  | | ||||||||||| || |||||| |||||||||||  |||| ||||||| |||||  |||||||    
T  4016254 ctttcgcactggtttccgacccaccaatggtgagcaactaatccggctcgtgtgtagaggcatgcgcactggccaagtgttgttccccctgataatcgaa 4016353  T
Q  344 cccggtatt 352  Q
    |||| ||||    
T  4016354 cccgatatt 4016362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #65
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 35561855 - 35561935
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||| |||||||| |||||| ||||||||||| ||| | ||||||| | |||||| |||||| || |||||||| |||||    
T  35561855 taatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatac 35561935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #66
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 352
Target Start/End: Complemental strand, 19839382 - 19839327
Alignment:
Q  297 gtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||| |||||||||||||||||||||||||  |||| |||| ||| ||||||||    
T  19839382 gtagaggcatgcgcactgatcaagcgttgttcctcctgaaaattgaatccggtatt 19839327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #67
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 28857057 - 28857002
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgta 299  Q
    ||||||||||||||||| ||||| ||||| ||  ||| ||||||||||||||||||    
T  28857057 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgta 28857002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #68
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 35006772 - 35006843
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||| ||||| ||||||||| ||||| |||||| |||||||||||| | || | ||| |||||||||||||    
T  35006772 taatctggctcgtgcgtagaggcatgcacactgaccaagcgttgttccctctcggaatggaacccggtattc 35006843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #69
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 268 - 314
Target Start/End: Original strand, 14974347 - 14974393
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    ||||| ||||||| ||||||||||||||||||||| |||| ||||||    
T  14974347 caaaggtggacgactaatccggctcatgcgtagaggcatgtgcactg 14974393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 20590069 - 20590023
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||| |||||||||||||||| |||||||||||  ||||||||||||    
T  20590069 taatacggctcatgcgtagagtcatgcgcactggccaagcgttgttc 20590023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 255 - 341
Target Start/End: Complemental strand, 32874884 - 32874798
Alignment:
Q  255 gtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcg 341  Q
    |||||| ||||| ||| | |||||||||||| |||||| |||||| ||  |||||||||  ||||||||||||| || || ||||||    
T  32874884 gtttccgacccaccaatggtggacgattaattcggctcgtgcgtaaaggtatgcgcactagtcaagcgttgttccccttgaaaatcg 32874798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #72
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 294 - 352
Target Start/End: Original strand, 35403561 - 35403619
Alignment:
Q  294 tgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||||||||||||||| ||  |||||||||||| ||||   ||||||||||||||||    
T  35403561 tgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatt 35403619  T

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Target: chr5; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 16755160 - 16755104
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcg 297  Q
    ||||||||||||||||||| |||||| |||   ||||||| ||||||| ||||||||    
T  16755160 tttctttcgcaccggtttctaacccaccaatagtggacgactaatccgactcatgcg 16755104  T

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Target: chr5; HSP #74
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 20693041 - 20692929
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||||| | ||||| |  ||||||  |||| |||| | ||||  |||||||||||  | || | |||| ||    
T  20693041 ctttcgcaccggtttccgacccaccaaaggtggacaactaatctgaatcatgcacagaggcatgtgtactggccaagcgttgtttcctctaggaatcaaa 20692942  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  20692941 cccggtattcccc 20692929  T

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Target: chr8 (Bit Score: 73; Significance: 3e-33; HSPs: 54)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 45521279 - 45521168
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||||||||| ||  ||| ||||||||||||||||||||| ||||||||||||||||| ||||||| |||||| |||||||    
T  45521279 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttc-ccctgggaatcgaa 45521181  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  45521180 cccggtattcccc 45521168  T

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Target: chr8; HSP #2
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 244 - 361
Target Start/End: Complemental strand, 18374121 - 18374004
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||| | ||||| ||||||||||||| ||||||||||||||||||||| ||||||||||| |||||||||||||||||||  |||||||    
T  18374121 cttttgcaccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaa 18374022  T
Q  344 cccggtattccccagata 361  Q
    || |||||| ||| ||||    
T  18374021 cctggtatttcccggata 18374004  T

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Target: chr8; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 2467117 - 2467235
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| || || |||   ||||||| ||||||||||||||| |||||||||||||||||  |||| ||||||| ||||||||||||||    
T  2467117 ctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaa 2467216  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  2467217 cccggtattccccggatac 2467235  T

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Target: chr8; HSP #4
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 43027416 - 43027298
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||||||| ||  ||| ||||||||  ||||| |||||||    
T  43027416 ctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaa 43027317  T
Q  344 cccggtattccccagatac 362  Q
    ||| |||||||||| ||||    
T  43027316 cccagtattccccaaatac 43027298  T

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Target: chr8; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 245 - 353
Target Start/End: Original strand, 4479296 - 4479403
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| ||||| ||||| ||||||| |||||| |||||||||||||| |||||||||||  |||||||||||| |||||| |||||||     
T  4479296 tttcgcaccggtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttc-ccctgggaatcgaat 4479394  T
Q  345 ccggtattc 353  Q
    |||||||||    
T  4479395 ccggtattc 4479403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 583923 - 583817
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||| || ||||||||| ||| ||| ||||||| ||||||||||||| ||||||||||| |||||||||||  ||||| | |||||||    
T  583923 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgt--tccctaggaatcgaa 583826  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  583825 cccggtatt 583817  T

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Target: chr8; HSP #7
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 245 - 358
Target Start/End: Original strand, 15884556 - 15884668
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| ||||| ||||| ||| ||| ||||||||||| ||||||||| ||||||||||   |||| ||||||| |||||| ||||||||    
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttc-ccctgggaatcgaac 15884654  T
Q  345 ccggtattccccag 358  Q
    ||||||||||||||    
T  15884655 ccggtattccccag 15884668  T

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Target: chr8; HSP #8
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 8141213 - 8141101
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||  ||||| ||||  ||||||| |||| | |||||||||||||| |||||||||||  |||||||||||  ||||||||||||||    
T  8141213 ctttcgcatcggtttctgacccaccaaatgtggacgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaa 8141114  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  8141113 cccggtattcccc 8141101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 10927717 - 10927605
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| |||||  |||| || |||| ||||||||||||||||||||| |||||||||||  ||||||||||||  ||| | |||||||    
T  10927717 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 10927618  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  10927617 cccggtattcccc 10927605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 44893274 - 44893389
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||| |||||||||||| ||||||||| | ||  ||||||||||||||| ||||||||| ||||| |||||  ||||| |||||| |||| |||||     
T  44893274 tttcttttgcaccggtttccgacccatcaagggtgagcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaatt 44893373  T
Q  341 gaacccggtattcccc 356  Q
    ||||||||||||||||    
T  44893374 gaacccggtattcccc 44893389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 6100583 - 6100465
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||| | |||||  |||| || |||| ||||||||||||||||||| | |||||||||||  ||||||||||||  ||||| |||||||    
T  6100583 ctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 6100484  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  6100483 cccggtattccccggatac 6100465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 43033012 - 43032894
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||| ||| ||||||||||| || |||||| |||||||||||  |||||||||||| |||||| |||||||    
T  43033012 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 43032913  T
Q  344 cccggtattccccagatac 362  Q
     ||| |||| |||||||||    
T  43032912 tccgatatttcccagatac 43032894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 331
Target Start/End: Complemental strand, 23895682 - 23895592
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctcc 331  Q
    ||||||||||||| |||||| ||||||||||| ||||||||||||||  ||| |||||||||  ||||||||||  |||||||||||||||    
T  23895682 tttctttcgcacccgtttccgacccatcaaaggtggacgattaatccatctcgtgcgtagaggtatgcgcactggccaagcgttgttctcc 23895592  T

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Target: chr8; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 1013009 - 1013094
Alignment:
Q  277 acgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| |||||||||||||||| |||| | ||||  |||||||||||| |||||| |||||||||||||||||||| |||||    
T  1013009 acgattaattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatac 1013094  T

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Target: chr8; HSP #15
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 14846686 - 14846575
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| ||||| ||||| ||||| ||||||| | ||| | ||||||||||||| |||||||||||| ||| | |||||| |||||  |||||||    
T  14846686 ctttcgcaccgatttccgacccaccaaaggtggacgacttatctgactcatgcgtagaggcatgcgcactgaccaatcattgttc-ccctgagaatcgaa 14846588  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  14846587 cccggtattcccc 14846575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 24837353 - 24837241
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| | ||| ||||| ||||||| |||||| |||| ||| ||||| ||||  |||||  ||||||||||||||||||| |||||||    
T  24837353 ctttcgcaccagtttccgatccaccaaaggtggacgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaa 24837254  T
Q  344 cccggtattcccc 356  Q
    | |||||||||||    
T  24837253 cacggtattcccc 24837241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 269 - 356
Target Start/End: Original strand, 33401823 - 33401910
Alignment:
Q  269 aaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||| ||| ||| ||||||| ||||||||||||| ||||| ||||| ||||| ||||||| ||||| |||||||||||||||||||||    
T  33401823 aaaggtgggcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattcccc 33401910  T

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Target: chr8; HSP #18
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 3418512 - 3418630
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  |||||  |||| ||||||| ||||| | ||||||||||||  |||||||||||  |||| |||||||  |||  ||||||||    
T  3418512 ctttcgcaccggtttctgacccactaaaggtggacgactaatctgactcatgcgtagacgcatgcgcactggccaagtgttgttcctcctaaaaatcgaa 3418611  T
Q  344 cccggtattccccagatac 362  Q
    |||| ||||||||||||||    
T  3418612 cccgatattccccagatac 3418630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 26571035 - 26570917
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| || |||||||| || |||||||| ||||||| ||||||||||||||||||||  ||| | |||||  |||||||||||| |||| | ||| |||    
T  26571035 ctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttccccctaggaattgaa 26570936  T
Q  344 cccggtattccccagatac 362  Q
    |||| |||| |||||||||    
T  26570935 cccgatatttcccagatac 26570917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 9859994 - 9860106
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| ||| |||||||| | ||| ||| | ||||||| ||||| |||||||| |||||| ||||| |||||  |||| ||||||| |||||| |||||||    
T  9859994 cttttgcatcggtttccgatccaccaatggtggacgactaatctggctcatgtgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 9860093  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  9860094 cccggtattcccc 9860106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 17981552 - 17981444
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| || || ||||| ||| | | |||| || ||| ||||||||| ||||| ||||| ||||| ||||||| |||||| |||||||    
T  17981552 ctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaa 17981453  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  17981452 cccggtatt 17981444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 6042894 - 6042820
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||||||||||||||||  || |||||||||||  |||||||||||| || ||| ||||||||||||||||||||    
T  6042894 taatccggctcatgcgtttaggcatgcgcactggccaagcgttgttccccttgggaatcgaacccggtattcccc 6042820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 14666070 - 14666188
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||||| |||   ||| ||| ||||| ||||  ||||||||| |||||||||||  |||| ||||||  |||||| |||||||    
T  14666070 ctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 14666169  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  14666170 cccggtattccccggatac 14666188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 8997543 - 8997655
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| || |||| ||||| |||||||||||| || |||||| ||||   || |||||||| || | | |||||||    
T  8997543 ctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaa 8997642  T
Q  344 cccggtattcccc 356  Q
    | |||||||||||    
T  8997643 cacggtattcccc 8997655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 11786021 - 11785915
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||||| | ||||||||| ||  ||||||||| ||||||||||||||| ||||| |||||  ||| ||||| || |||| | ||||||| ||||    
T  11786021 gcaccggtttccgatccatcaaagatgagcgattaatctggctcatgcgtagaggcatgcacactgcccaaacgttgctc-cccttggaatcgaatccgg 11785923  T
Q  349 tattcccc 356  Q
    ||||||||    
T  11785922 tattcccc 11785915  T

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Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 268 - 343
Target Start/End: Complemental strand, 22958857 - 22958782
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||||| ||||||||||||||| ||||||||||| |||||| ||||| |||||| | ||| ||||||||    
T  22958857 caaaggtggacgactaatccggctcatgcatagagacatgcacactgaccaagcattgttccctctgaaaatcgaa 22958782  T

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Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 10535403 - 10535512
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||  | ||||| || |||| |||| |||||||||||| ||||||||||||||| ||||||| ||||| ||||| |||| |||    
T  10535403 ctttcgcaccagtttccgacttaccaaaggtgaacgactaattcggctcatgcgtggagacatgcgcactggtcaagcggtgttc-ccctgaaaattgaa 10535501  T
Q  344 cccggtattcc 354  Q
    ||  |||||||    
T  10535502 ccatgtattcc 10535512  T

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Target: chr8; HSP #28
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 251 - 353
Target Start/End: Original strand, 24938568 - 24938670
Alignment:
Q  251 accggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggta 350  Q
    |||||||||| | ||||||||| |||| || |||||||| |||||||||||| |||||||| ||| |||| ||||||    || ||||||||||| ||||    
T  24938568 accggtttccgatccatcaaaggtggatgactaatccggttcatgcgtagaggcatgcgcattgaccaagtgttgtttcatctagaaatcgaacctggta 24938667  T
Q  351 ttc 353  Q
    |||    
T  24938668 ttc 24938670  T

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Target: chr8; HSP #29
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 27976002 - 27975900
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| ||||| |  |||||  |||| ||| |||||||||||||||| |||||||| ||||| ||||||||||| |||||||   |||| |||||||    
T  27976002 ctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaa 27975903  T
Q  344 ccc 346  Q
    |||    
T  27975902 ccc 27975900  T

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Target: chr8; HSP #30
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 28033271 - 28033169
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| ||||| |  |||||  |||| ||| |||||||||||||||| |||||||| ||||| ||||||||||| |||||||   |||| |||||||    
T  28033271 ctttcgcatcggttcctgacccactaaaggtgggcgattaatccggctcaagcgtagaggcatgcacactgatcaagtgttgttccttctgggaatcgaa 28033172  T
Q  344 ccc 346  Q
    |||    
T  28033171 ccc 28033169  T

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Target: chr8; HSP #31
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 240 - 354
Target Start/End: Complemental strand, 36662519 - 36662406
Alignment:
Q  240 ctttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaat 339  Q
    |||||||||||| |||||||| | |||| |||  ||||||| |||||||| |||| ||||||| |||||||||||   |||  |||||| ||||| ||||    
T  36662519 ctttctttcgcatcggtttccgatccattaaaagtggacgactaatccggttcatacgtagaggcatgcgcactggctaagtattgttc-ccctgaaaat 36662421  T
Q  340 cgaacccggtattcc 354  Q
    |||||||| ||||||    
T  36662420 cgaacccgatattcc 36662406  T

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Target: chr8; HSP #32
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 347
Target Start/End: Complemental strand, 29933845 - 29933780
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccg 347  Q
    ||||||||||||| ||||||| ||||  ||||| ||||| |||||||||||||| |||||||||||    
T  29933845 taatccggctcatacgtagaggcatgtacactggtcaagtgttgttctccctgggaatcgaacccg 29933780  T

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Target: chr8; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 68097 - 68209
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||||| ||||||||||| || |||||||||||||||| || ||| || |||||  ||||  ||| ||||||||  ||||  |||||||    
T  68097 cttttgcaccggtttccgacccatcaaaggtgaacgattaatccggctcgtgtgtaaaggcatgcatactggccaaacgttgttcctcctgagaatcgaa 68196  T
Q  344 cccggtattcccc 356  Q
    |||| | ||||||    
T  68197 cccgatcttcccc 68209  T

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Target: chr8; HSP #34
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 2964187 - 2964075
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||| ||| |||||||| || ||||||||| ||||| || ||  ||||||||||||  | | | |||||||    
T  2964187 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttcctcatcggaatcgaa 2964088  T
Q  344 cccggtattcccc 356  Q
    | |||||||||||    
T  2964087 cacggtattcccc 2964075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 20240651 - 20240563
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| ||| | ||| ||||||||| |||||||||||| ||| |||| || | |||||||||||||| || ||||||| ||||||    
T  20240651 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatac 20240563  T

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Target: chr8; HSP #36
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 20252416 - 20252504
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| ||| | ||| ||||||||| |||||||||||| ||| |||| || | |||||||||||||| || ||||||| ||||||    
T  20252416 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatac 20252504  T

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Target: chr8; HSP #37
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 354
Target Start/End: Original strand, 33935772 - 33935844
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    ||||||| |||||||||| || |||||||||||  |||| |||||||||||| | ||||||| ||||||||||    
T  33935772 taatccgactcatgcgtataggcatgcgcactggccaagtgttgttctccctaggaatcgaatccggtattcc 33935844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 288 - 356
Target Start/End: Original strand, 38922457 - 38922525
Alignment:
Q  288 ggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    ||||| |||||| || |||||||||||  |||||||||||| | |||| ||||||||||||||||||||    
T  38922457 ggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattcccc 38922525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 245 - 328
Target Start/End: Complemental strand, 16963777 - 16963694
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||||||  |||||||||||| |||| | ||||| ||||||| ||  || ||| ||||||| ||||||||||||||||||||    
T  16963777 tttcgcaccaatttccaacccattaaaggtagacgactaatccgacttgtgtgtaaagacatgtgcactgatcaagcgttgttc 16963694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 11298266 - 11298336
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    ||||||||||||||||| ||||| ||||| ||  ||||||||  ||||||||| ||||| |||||||||||    
T  11298266 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatttggctcatgcatagaggcatgcgcactg 11298336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 16894046 - 16893930
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||| | ||||| ||| |||  ||||||||||||||||| || |||| | ||||  |||||||| ||| |||||  |||||||    
T  16894046 ctttcgcaccggtttccgacc-accaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaa 16893949  T
Q  344 cccggtattccccagatac 362  Q
    |||| |||||||| |||||    
T  16893948 cccgatattccccggatac 16893930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 328
Target Start/End: Complemental strand, 21174213 - 21174167
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||||||| |||||||||| |||||||||||| ||||||||||||    
T  21174213 taatccggctgatgcgtagagccatgcgcactgaccaagcgttgttc 21174167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 3692944 - 3692864
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgtt 324  Q
    |||||| |||||||| | ||| | ||||| || ||||||||| ||||||||||||||||  ||||||||||| ||| ||||    
T  3692944 ctttcgtaccggttttcgacctaccaaaggtgaacgattaattcggctcatgcgtagaggtatgcgcactgaccaaacgtt 3692864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 241 - 352
Target Start/End: Complemental strand, 6940671 - 6940561
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||| || |||||||| ||||| ||||| |||| || |||| || |||||| ||| ||  |||||||||   ||||||||||||  ||||||||||    
T  6940671 tttctttcacatcggtttcctacccaccaaaggtggatgactaattcgactcatgtgtaaagt-atgcgcactagccaagcgttgttccacctggaaatc 6940573  T
Q  341 gaacccggtatt 352  Q
    ||||||| ||||    
T  6940572 gaacccgatatt 6940561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 284 - 335
Target Start/End: Original strand, 8586978 - 8587029
Alignment:
Q  284 atccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctgg 335  Q
    |||||||||||||||||||  ||||||||||  |||||||||||| ||||||    
T  8586978 atccggctcatgcgtagaggtatgcgcactggccaagcgttgttccccctgg 8587029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 327
Target Start/End: Original strand, 35496274 - 35496337
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    ||||||||| ||| |||||||||| |||| | ||||||| |||||||||||| |||| ||||||    
T  35496274 ccatcaaaggtgggcgattaatccagctcgtacgtagaggcatgcgcactgaccaagtgttgtt 35496337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 262 - 320
Target Start/End: Complemental strand, 25848269 - 25848211
Alignment:
Q  262 acccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaag 320  Q
    ||||| ||||| ||||||| || |||| |||||||||||||||||| ||||||| ||||    
T  25848269 acccagcaaaggtggacgactagtccgactcatgcgtagagacatgtgcactgaccaag 25848211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 281 - 355
Target Start/End: Complemental strand, 34846887 - 34846813
Alignment:
Q  281 ttaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    |||||| ||||  ||||||||| |||||  ||||  |||||||||||| || ||| |||||||||||||||||||    
T  34846887 ttaatctggcttgtgcgtagaggcatgcatactggccaagcgttgttcaccatgggaatcgaacccggtattccc 34846813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 241 - 302
Target Start/End: Complemental strand, 8817147 - 8817086
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagag 302  Q
    |||||||||||||||||||| || |||||||| | ||| | ||||||| ||| |||||||||    
T  8817147 tttctttcgcaccggtttccgactcatcaaagatagacaagtaatccgactcgtgcgtagag 8817086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 362
Target Start/End: Complemental strand, 13085633 - 13085517
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| ||||| |   | ||| ||||||||| ||||| |||||||||  |||| |||||   || |||||||| | |||  ||||||||    
T  13085633 tttcgcaccggtttccgaccca-ctttgatgggcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaac 13085535  T
Q  345 ccggtattccccagatac 362  Q
    |||||||||||| |||||    
T  13085534 ccggtattccccggatac 13085517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 242 - 343
Target Start/End: Original strand, 36914430 - 36914531
Alignment:
Q  242 ttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcg 341  Q
    |||||||  |||||||| | ||||| ||| | |||| || ||||||  ||||||| ||| || ||| ||||||||||||||||||||  |||| ||||||    
T  36914430 ttctttcataccggttttcgacccaccaatggtggatgactaatccaactcatgcatagtgatatgtgcactgatcaagcgttgttcctcctgaaaatcg 36914529  T
Q  342 aa 343  Q
    ||    
T  36914530 aa 36914531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 254 - 354
Target Start/End: Complemental strand, 3568005 - 3567905
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||| ||||| ||||| |||| || ||||  |||||||||||||||  ||| |||||| ||||| ||||||| ||||   | ||||| |||||||||    
T  3568005 ggtttccgacccaccaaaggtggatgactaatttggctcatgcgtagaggtatgtgcactggtcaagtgttgttcccccttagattcgaatccggtattc 3567906  T
Q  354 c 354  Q
    |    
T  3567905 c 3567905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 276 - 347
Target Start/End: Complemental strand, 22810156 - 22810088
Alignment:
Q  276 gacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccg 347  Q
    ||||| ||||| |||||||||| |||  |||||||||||| |||||||||||| ||| || |||||||||||    
T  22810156 gacgactaatctggctcatgcgaaga--catgcgcactgaccaagcgttgttc-cccagggaatcgaacccg 22810088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 356
Target Start/End: Complemental strand, 30903386 - 30903335
Alignment:
Q  304 catgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    ||||||||||| |||||| ||||| |||||| |||||||| ||||||||||||    
T  30903386 catgcgcactggtcaagcattgtt-tccctgaaaatcgaatccggtattcccc 30903335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 73; Significance: 3e-33; HSPs: 42)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 5253222 - 5253334
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||||||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  5253222 ctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 5253321  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  5253322 cccggtattcccc 5253334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 8932772 - 8932654
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||| ||||||||||   |||| ||||||| |||||| |||||||    
T  8932772 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8932673  T
Q  344 cccggtattccccagatac 362  Q
    |||| |||||||| |||||    
T  8932672 cccgatattccccggatac 8932654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 8944238 - 8944120
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||||||||| |||  |||||||||||||||||||||||| ||||||||||   |||| ||||||| |||||| |||||||    
T  8944238 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8944139  T
Q  344 cccggtattccccagatac 362  Q
    |||| |||||||| |||||    
T  8944138 cccgatattccccggatac 8944120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 21898759 - 21898641
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||||| |||||||||||  ||||||||||||  ||||| |||||||    
T  21898759 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 21898660  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  21898659 cccggtattccccggatac 21898641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 241 - 361
Target Start/End: Complemental strand, 8938825 - 8938705
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||||| ||||||||||| ||||||| |||| |||||||||||||||  | ||||||||| ||||| |||||||  ||||| ||||    
T  8938825 tttctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatc 8938726  T
Q  341 gaacccggtattccccagata 361  Q
    |||||  ||||||||| ||||    
T  8938725 gaaccaagtattccccggata 8938705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 29444764 - 29444876
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||  |||||| ||||| ||||| ||||| | ||||||||||||||||||||| |||||||||||  |||||||||||| |||| |||||||||    
T  29444764 ctttcgcactagtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaa 29444863  T
Q  344 cccggtattcccc 356  Q
    |||||||| ||||    
T  29444864 cccggtatccccc 29444876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 6606096 - 6606214
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| ||||  |||||  |||| ||||||| |||||  |||||||    
T  6606096 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaa 6606195  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  6606196 cccggtattccccggatac 6606214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 12606541 - 12606423
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||||| | || ||||| ||| ||| ||||||||||| ||||||||| |||||||||||  ||| |||||||| ||||||||||||||    
T  12606541 ctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 12606442  T
Q  344 cccggtattccccagatac 362  Q
     | |||||||||| |||||    
T  12606441 tctggtattccccggatac 12606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 29333135 - 29333248
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||||||||| || ||| | ||||| ||||||| | || |||||||||||||||| |||||||||||  ||| |||||||| |||||||||||    
T  29333135 tttctttcgcaccggttaccgacctaccaaaggtggacgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgttc-ccctggaaatc 29333233  T
Q  341 gaacccggtattccc 355  Q
    |||||||||||||||    
T  29333234 gaacccggtattccc 29333248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 3601195 - 3601083
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||||||||||| || ||| || |||||||||||  |||||||||||| |||||  |||||||    
T  3601195 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaa 3601096  T
Q  344 cccggtattcccc 356  Q
     ||||||||||||    
T  3601095 accggtattcccc 3601083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 13036003 - 13036115
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| |||   ||||||| ||||| ||||||||||||||| |||||||||||  |||| ||||||| ||||| ||||||||    
T  13036003 ctttcgcaccggtttccgacccaccaatagtggacgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaa 13036102  T
Q  344 cccggtattcccc 356  Q
    |||| ||||||||    
T  13036103 cccgatattcccc 13036115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 14107357 - 14107469
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  ||   ||| ||| ||||||||||||||||||||| |||| |||||| |||||||||||||  ||||| |||||||    
T  14107357 ctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaa 14107456  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  14107457 cccggtattcccc 14107469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 56; E-Value: 4e-23
Query Start/End: Original strand, 244 - 347
Target Start/End: Complemental strand, 5029928 - 5029825
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||||||||| ||| ||| ||||||  ||||||||||||| |||||||||||| ||| ||||||||||||||  |||||||    
T  5029928 ctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctccctgagaatcgaa 5029829  T
Q  344 cccg 347  Q
    ||||    
T  5029828 cccg 5029825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 2271307 - 2271412
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||| ||||||  ||||||||||| ||||||| ||||||||||| |||||||||||||||||||||   ||||||||||||  |||  ||||||||||||    
T  2271307 gcactggtttctgacccatcaaaggtggacgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttct--ctgagaatcgaacccgg 2271404  T
Q  349 tattcccc 356  Q
    ||||||||    
T  2271405 tattcccc 2271412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 8611973 - 8612085
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||| ||| |||||||| |||||||||||  ||||| ||||| |||||||||||||  ||| | |||||||    
T  8611973 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 8612072  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  8612073 cccggtattcccc 8612085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 9179732 - 9179846
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||| |||| ||||| | ||| ||||| ||||||| |||||| ||||||||||||||  ||||  |||| ||||| ||||||| |||||| ||||    
T  9179732 tttctttcggaccgatttccgatccaccaaaggtggacgactaatccagctcatgcgtagaggtatgcatactggtcaagtgttgttccccctgggaatc 9179831  T
Q  341 gaacccggtattccc 355  Q
    |||||||||||||||    
T  9179832 gaacccggtattccc 9179846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 13469044 - 13468926
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||||||||| ||| | ||| ||| ||||| ||||| ||||||||| |||| ||||||| ||| |||||||| |||| | ||| |||    
T  13469044 ctttcgcaccggtttccaacccaccaatggtgggcgactaatctggctcgtgcgtagaggcatgtgcactgaccaatcgttgttccccctaggaattgaa 13468945  T
Q  344 cccggtattccccagatac 362  Q
    || |||||||||| |||||    
T  13468944 cctggtattccccggatac 13468926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 19089609 - 19089499
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| | ||||| ||||||||||| ||||||||| ||||| |||||  |||| ||||||| |||||| |||| ||    
T  19089609 ctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaa 19089510  T
Q  344 cccggtattcc 354  Q
    || ||||||||    
T  19089509 cctggtattcc 19089499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 34954618 - 34954732
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||  ||||||| ||||||||||| ||||||| ||||| |||||||||||||||  ||| ||||||  ||| |||||||| |||||  |||||||    
T  34954618 ctttcgcattggtttccgacccatcaaaggtggacgactaatctggctcatgcgtagaggtatgtgcactggccaaacgttgttccccctgagaatcgaa 34954717  T
Q  344 cccggtattccccag 358  Q
    || ||||||||||||    
T  34954718 cctggtattccccag 34954732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 9633624 - 9633708
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||| ||||||||| |||||||||||  ||||||||||||    
T  9633624 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 3587944 - 3588062
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| | |||||| | ||||||||| | ||||| |||||||| ||||||||||||  ||| ||||||  |||||||||||| || ||| |||||||    
T  3587944 ctttcgcatcagtttccgatccatcaaaggttgacgactaatccggttcatgcgtagaggtatgtgcactggccaagcgttgttccccttgggaatcgaa 3588043  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||| || |||||    
T  3588044 cccggtattctccggatac 3588062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 245 - 352
Target Start/End: Complemental strand, 11142713 - 11142606
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||| ||| ||||| ||||||||||| | ||||| | ||||||||||||| ||||||||||| |||| |||||||  | |||  ||||||||    
T  11142713 tttcgcaccggtctccgacccaccaaagttggacaactaatctgactcatgcgtagaggcatgcgcactggtcaaacgttgtttccactgcgaatcgaac 11142614  T
Q  345 ccggtatt 352  Q
     |||||||    
T  11142613 tcggtatt 11142606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 21167486 - 21167431
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgta 299  Q
    ||||||||||||||| ||||||||||| | ||||||||||||||||||||||||||    
T  21167486 ctttcgcaccggttttcaacccatcaatggtggacgattaatccggctcatgcgta 21167431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 355
Target Start/End: Original strand, 8149797 - 8149906
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||||||||| ||||| ||||||| |||| ||||| |||||||||| |||| ||| || ||||   ||||||| ||| | ||||||||    
T  8149797 tttcgcaccggtttccaacccaccaaaggtggacgactaattcggctaatgcgtagaggcatgtgcattggtcaaatattgttct-cctaggaatcgaac 8149895  T
Q  345 ccggtattccc 355  Q
    ||| |||||||    
T  8149896 ccgatattccc 8149906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 12635925 - 12635807
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| |||   ||| ||| ||||||||||  ||||||||| ||||||||||   |||||||||||  |||||| |||| ||    
T  12635925 ctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaa 12635826  T
Q  344 cccggtattccccagatac 362  Q
    || |||||||||| |||||    
T  12635825 cctggtattccccggatac 12635807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 24671865 - 24671983
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||| ||||| | |||||||||  |||| | ||||||||||  ||||||||| ||||| ||||| ||||| ||||||| | |||| ||| |||    
T  24671865 ctttcacaccgatttccgaaccatcaaaggcggactactaatccggcttgtgcgtagaggcatgcacactggtcaagtgttgttccctctgggaatagaa 24671964  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||| ||||||||    
T  24671965 cccggtattctccagatac 24671983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 277 - 358
Target Start/End: Complemental strand, 9147379 - 9147298
Alignment:
Q  277 acgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccag 358  Q
    |||| |||||||||| |||||||||| |||| |||||| ||||| || |||| |||||| ||||||||||| ||||||||||    
T  9147379 acgactaatccggcttatgcgtagaggcatgtgcactggtcaagtgtcgttccccctgggaatcgaacccgatattccccag 9147298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 14783419 - 14783488
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcact 313  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| ||||| ||||    
T  14783419 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacact 14783488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 30410556 - 30410472
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||||| |||||||| ||||| ||||| ||  |||||||||| |||||||||||||| ||||||||||| | ||| |||||||    
T  30410556 ctttcgcatcggtttccgacccaccaaagatgagcgattaatccagctcatgcgtagaggcatgcgcactggttaagtgttgttc 30410472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 30788852 - 30788936
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||| ||| ||||| |||||||||||  ||| ||||||||    
T  30788852 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttc 30788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 13584445 - 13584559
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggct----catgcgtagagacatgcgcactgatcaagcgttgttctccctggaaat 339  Q
    ||||||| ||||||||| ||||| ||||| ||||||||||||||||||    ||||| ||||| |||||||||||  ||| ||||||||  | | | |||    
T  13584445 ctttcgcgccggtttccgacccaccaaaggtggacgattaatccggctcatgcatgcatagaggcatgcgcactggccaaacgttgttcatcttaggaat 13584544  T
Q  340 cgaacccggtattcc 354  Q
    |||||| ||||||||    
T  13584545 cgaacctggtattcc 13584559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 241 - 357
Target Start/End: Original strand, 9366420 - 9366535
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||| ||||||  |||| | ||||| ||| ||  ||||||||||| ||||||||| |||||||||||  |||||||| ||| ||||  |||||    
T  9366420 tttctttcgcatcggtttttaacctaccaaaggtgg-cgtctaatccggctcgtgcgtagaggcatgcgcactggccaagcgttattccccctaaaaatc 9366518  T
Q  341 gaacccggtattcccca 357  Q
    ||||| | |||||||||    
T  9366519 gaacctgatattcccca 9366535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 294 - 362
Target Start/End: Original strand, 10311518 - 10311586
Alignment:
Q  294 tgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||||||||||||||||||||  |||||||||||| || ||   ||||||||||||||||||| |||||    
T  10311518 tgcgtagagacatgcgcactggccaagcgttgttccccttgaggatcgaacccggtattccccggatac 10311586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 260 - 355
Target Start/End: Original strand, 19230574 - 19230668
Alignment:
Q  260 caacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||||| ||| | || |||| ||||||||||| ||||||||| |||||  ||||| |||||||||||| || || |||||||| |||||||||||    
T  19230574 caacccaccaatgatgaacgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttc-ccttgaaaatcgaatccggtattccc 19230668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 244 - 334
Target Start/End: Complemental strand, 31129288 - 31129198
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctg 334  Q
    ||||||||||||||||| || || ||||| || || | ||||| ||||||||||||||| ||||||||||   ||||||||| || |||||    
T  31129288 ctttcgcaccggtttccgactcaccaaaggtgcacaactaatctggctcatgcgtagaggcatgcgcactagccaagcgttgctccccctg 31129198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 282 - 352
Target Start/End: Original strand, 33859356 - 33859426
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    ||||||| || |||||||||| |||||||||||  ||| |||||||| ||||  |||||||||||||||||    
T  33859356 taatccgactaatgcgtagaggcatgcgcactgggcaaacgttgttccccctaaaaatcgaacccggtatt 33859426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 13391397 - 13391289
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||| | |||||| |||  ||| ||| ||||||||||| ||||||||| |||||||||||  ||| | |||||| ||||| ||||||||    
T  13391397 cttttgcaccggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttc-ccctgaaaatcgaa 13391299  T
Q  344 cccggtattc 353  Q
     ||| |||||    
T  13391298 tccgatattc 13391289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 264 - 327
Target Start/End: Complemental strand, 8888973 - 8888910
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    ||||||||| ||||||| ||||||| |||||||||||||  ||||||||||  ||| |||||||    
T  8888973 ccatcaaaggtggacgactaatccgactcatgcgtagaggtatgcgcactggccaaacgttgtt 8888910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 249 - 328
Target Start/End: Original strand, 17114901 - 17114980
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||| ||||| ||| ||||||| ||| ||| ||||||||||||||||||||| ||||  || ||  ||||||||||||    
T  17114901 gcaccgatttccgacctatcaaaggtgggcgactaatccggctcatgcgtagaggcatgtccattggccaagcgttgttc 17114980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 328
Target Start/End: Original strand, 32157167 - 32157250
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||| ||||||||||  | ||| ||||| |||| || ||||| |||||||||||||||  |||||||||| ||||| |||||||    
T  32157167 tttcacaccggtttctgatccaccaaagatggatgactaatctggctcatgcgtagaggtatgcgcactggtcaagtgttgttc 32157250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 356
Target Start/End: Original strand, 21016785 - 21016862
Alignment:
Q  279 gattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||||||| || | |||| ||||| ||||| ||||||  ||| |||||||||| | | ||||||||||||||||||||    
T  21016785 gattaatctggattatgcatagaggcatgcacactgactaagtgttgttctccttaggaatcgaacccggtattcccc 21016862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 251 - 328
Target Start/End: Complemental strand, 21945392 - 21945316
Alignment:
Q  251 accggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||||||||||| || |||  |||||||||| |||||||||||| ||||| ||| || ||||  ||||||||||||    
T  21945392 accggtttccaacc-ataaaaaatggacgattattccggctcatgcatagaggcatacgaactggccaagcgttgttc 21945316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 73; Significance: 3e-33; HSPs: 80)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 36145214 - 36145326
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |  |||||||| ||||||| |||||||||||||| |||||| ||||||||||||||||||||||||  |||||| |||||||    
T  36145214 ctttcgcaccggtttccgattcatcaaaggtggacgactaatccggctcatgtgtagaggcatgcgcactgatcaagcgttgtttcccctgggaatcgaa 36145313  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  36145314 cccggtattcccc 36145326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 55921146 - 55921034
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||  ||||||||||||||||| ||||||| |||||||||||| |||| ||||||| |||||| |||||||    
T  55921146 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 55921047  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  55921046 cccggtattcccc 55921034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 29895899 - 29895781
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||| ||| | ||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  29895899 ctttcgcaccggtttccgaaccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 29895800  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  29895799 cccggtattccccggatac 29895781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 358
Target Start/End: Complemental strand, 2559422 - 2559305
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||||| ||||| ||||| ||||||| ||||||||||  ||||||||| |||||||||||  ||||||||||||  ||| ||||||    
T  2559422 tttctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatc 2559323  T
Q  341 gaacccggtattccccag 358  Q
    ||| ||||||||||||||    
T  2559322 gaatccggtattccccag 2559305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 245 - 362
Target Start/End: Complemental strand, 33647832 - 33647715
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| | ||| ||||| || |||| ||||| || || |||||||||  ||| |||||| |||||||||||||||||||||||||||||    
T  33647832 tttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaac 33647733  T
Q  345 ccggtattccccagatac 362  Q
    ||||||||||||||||||    
T  33647732 ccggtattccccagatac 33647715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 250 - 362
Target Start/End: Complemental strand, 8889128 - 8889016
Alignment:
Q  250 caccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggt 349  Q
    ||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||| | |||||||||||||    
T  8889128 caccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaacccggt 8889029  T
Q  350 attccccagatac 362  Q
    ||||||| |||||    
T  8889028 attccccggatac 8889016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 64; E-Value: 7e-28
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 40780861 - 40780968
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||| |||||||||||| || ||  ||||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaac 40780960  T
Q  345 ccggtatt 352  Q
    ||| ||||    
T  40780961 ccgatatt 40780968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 20421885 - 20421768
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| || ||||||| ||||||||| | ||||||||||||| ||||||||||||||| |||||||||||  |||| ||||||| ||||||||||||||    
T  20421885 ctttcgaactggtttccgacccatcaatgatggacgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaa 20421786  T
Q  344 cccggtattccccagatac 362  Q
     || |||||||||||||||    
T  20421785 -ccagtattccccagatac 20421768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 38166139 - 38166021
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||| ||||||||| |||||||||||  |||||||||||| |||||| |||| ||    
T  38166139 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaa 38166040  T
Q  344 cccggtattccccagatac 362  Q
    ||| ||||||||| |||||    
T  38166039 cccagtattccccggatac 38166021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 7246645 - 7246757
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||||||| |||||||||||  |||||||||||| | || | |||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaa 7246744  T
Q  344 cccggtattcccc 356  Q
    ||| |||||||||    
T  7246745 cccagtattcccc 7246757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 53599172 - 53599060
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | |||  |||| || |||||||||||||||||||||||||| |||||||||||  ||| ||||||||  ||||| |||||||    
T  53599172 ctttcgcaccggtttccgatccactaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaa 53599073  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  53599072 cccggtattcccc 53599060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 52950194 - 52950080
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||||| ||||||| ||||| || ||||| |||||| |||||||||||  |||||||||||| |||||| |||||||    
T  52950194 ctttcgcatcggtttccgacccaccaaaggtggacgactaatctggttcatgtgtagagtcatgcgcactggccaagcgttgttccccctgggaatcgaa 52950095  T
Q  344 cccggtattccccag 358  Q
    |||| ||||||||||    
T  52950094 cccgatattccccag 52950080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 4738730 - 4738629
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||||||| |||| | ||||||||||||||||||||||||||   |||||||||||  |||||||||||||    
T  4738730 ctttcgcaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagagacatgcgcactggcaaagcgttgttcctcctggaaatcgaa 4738631  T
Q  344 cc 345  Q
    ||    
T  4738630 cc 4738629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 38075545 - 38075436
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||||| ||||| |||||| |||||||||||||||| |||||||||||  |||||||||||  |||||  |||||||    
T  38075545 ctttcgcatcggtttccgacccaccaaaggtggacaattaattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaa 38075446  T
Q  344 cccggtattc 353  Q
    ||||||||||    
T  38075445 cccggtattc 38075436  T

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Target: chr4; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 1446908 - 1446820
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| |||||||||||||||||||| |||||    
T  1446908 tggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatac 1446820  T

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Target: chr4; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 43468459 - 43468347
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||| ||| ||||| ||  | ||| ||| |||||||||||||||||||||| ||| ||||||  |||||||||||| |||||| |||||||    
T  43468459 ctttcgcaccggtctccgacccaccactggtgggcgactaatccggctcatgcgtagagaaatgtgcactggccaagcgttgttccccctgggaatcgaa 43468360  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  43468359 cccggtattcccc 43468347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 10541127 - 10541018
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||||||||| ||| ||||||||| ||||| ||||||||| ||||| |||||  |||||||||||  ||||||||||||||    
T  10541127 ctttcgcaccggtttccgatccatcaaaggtgg-cgattaatctggctcgtgcgtagaggcatgcacactggccaagcgttgtttcccctggaaatcgaa 10541029  T
Q  344 cccggtattcc 354  Q
    |||| ||||||    
T  10541028 cccgatattcc 10541018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 16450412 - 16450310
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||| | ||||| ||||||| ||||| ||||||||||||||| |||| ||||||  |||||||||||| |||||| |||||||    
T  16450412 ctttcgcaccggtttccgacctaccaaaggtggacgactaatctggctcatgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 16450313  T
Q  344 ccc 346  Q
    |||    
T  16450312 ccc 16450310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 48015072 - 48015182
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | |||||||| |||| | | ||||||||||| ||||||||| | |||||||||  |||||||||||| | |||| |||||||    
T  48015072 ctttcgcaccggtttccgatccatcaaaattgggctactaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaa 48015171  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  48015172 cccggtattcc 48015182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 16645230 - 16645118
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| || || ||| ||| ||||| | |||||| |||||| ||||| |||||  ||||||||||||| |||| ||||||||    
T  16645230 ctttcgcaccggtttccgacccaccacaggtgggcgactaatcagactcatgtgtagaggcatgcacactggccaagcgttgttcttcctgaaaatcgaa 16645131  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  16645130 cccggtattcccc 16645118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 42722576 - 42722684
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | |||||  |||| || |||| ||||||||||||||||||||| |||||||||||  ||||||||||||  ||||| ||| |||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaa 42722675  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  42722676 cccggtatt 42722684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 47078570 - 47078458
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||| ||||| ||| | ||  ||| ||||||||||| ||||||||| |||| ||||||  |||||||||||| |||||| |||||||    
T  47078570 ctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 47078471  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  47078470 cccggtattcccc 47078458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 3159468 - 3159586
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||||| ||||| ||| | ||  ||| ||||| ||||| ||||||||| |||||||||||  |||||||||||| |||||||| |||||    
T  3159468 cttttgcaccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaa 3159567  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||| || |||||    
T  3159568 cccggtattctccggatac 3159586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 254 - 352
Target Start/End: Complemental strand, 20354739 - 20354641
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||||||| ||||||   ||||||| ||||||| ||||||||||||| ||||||||||   |||||||||||||||||||||||| ||| |||||||    
T  20354739 ggtttccaactcatcaatagtggacgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatt 20354641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 43458725 - 43458607
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| || |||||||| ||||||| ||||||||||| | ||||||| |||||||||||  |||||||| |||  ||||| |||||||    
T  43458725 ctttcgcaacggtttccgactcatcaaaggtggacgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaa 43458626  T
Q  344 cccggtattccccagatac 362  Q
     || |||||||||| ||||    
T  43458625 tccagtattccccaaatac 43458607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 14858822 - 14858714
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||||||||| ||||||| ||||| | ||| | ||||||||||||||||||| |||||| ||| || |||||| || ||||    
T  14858822 ctttcgcaccggtttctgacccatcaaaggtggacgaataatctgactcgtacgtagagacatgcgcactggtcaagc-ttgatccccctgggaaccgaa 14858724  T
Q  344 cccggtattc 353  Q
    ||||||||||    
T  14858723 cccggtattc 14858714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 357
Target Start/End: Original strand, 15839934 - 15840046
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||||||| |||||||  || ||| ||||||||||||||||||||| |||||||||||  ||| |||| ||||  || | |||||||    
T  15839934 ctttcgcactggtttccaacctatcaaagaagggcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattct-tctaggaatcgaa 15840032  T
Q  344 cccggtattcccca 357  Q
    ||||||||||||||    
T  15840033 cccggtattcccca 15840046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 38168368 - 38168257
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||||||||||  |||| || |||| ||||||||||||||||||||| |||| ||||||  ||||||||||||  | | | |||||||    
T  38168368 ctttcgcaccggtttccaacccactaaaggtgaacgactaatccggctcatgcgtagaggcatg-gcactggccaagcgttgttcctcttaggaatcgaa 38168270  T
Q  344 cccggtattcccc 356  Q
    || ||||||||||    
T  38168269 cctggtattcccc 38168257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 241 - 327
Target Start/End: Original strand, 49952141 - 49952228
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttg-gacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    |||||||||||||||||||||||||||||||| ||   ||| ||||||||||||||||||||| | |||||||||| ||| |||||||    
T  49952141 tttctttcgcaccggtttccaacccatcaaaggtgacgcgactaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtt 49952228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 5472847 - 5472965
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||| | ||||| ||||| ||| ||| ||||||||||| ||||||||| |||||||||||  |||||||||||  |||||  |||| ||    
T  5472847 ctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaa 5472946  T
Q  344 cccggtattccccagatac 362  Q
    || |||||||||| |||||    
T  5472947 cctggtattccccggatac 5472965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 268 - 358
Target Start/End: Complemental strand, 6779299 - 6779209
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccag 358  Q
    ||||| ||||||| ||||||||||||||| ||||| |||||||||||  || | ||||||| |||||| ||||||||||||||||| ||||    
T  6779299 caaaggtggacgactaatccggctcatgcatagaggcatgcgcactggccaggtgttgttccccctgggaatcgaacccggtattctccag 6779209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 14124128 - 14124018
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||||||||| ||| | ||  ||| ||||||||||| || |||||| |||||||||||  |||  ||||||| |||||| |||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttccccctgggaatcgaa 14124029  T
Q  344 cccggtattcc 354  Q
    || ||||||||    
T  14124028 cctggtattcc 14124018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 8064797 - 8064906
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||| | ||| || || | ||||||| ||||||||||||||||||||| ||||||||||| ||||| ||| ||| || ||| |||||||    
T  8064797 cttttgcaccggttttcgacctattaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagtgttattccccttgggaatcgaa 8064896  T
Q  344 cccggtattc 353  Q
    ||| ||||||    
T  8064897 cccagtattc 8064906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 284 - 353
Target Start/End: Original strand, 20532448 - 20532517
Alignment:
Q  284 atccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||||||||||||||| |||||||||||  ||||||||||||  |||||||||||||| ||||||||    
T  20532448 atccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactcggtattc 20532517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 17080155 - 17080071
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||| | | ||||||||| ||  ||| ||||||||||||||||||||| |||||||||||  ||||||||||||    
T  17080155 ctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 17080071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 24166562 - 24166450
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||||||||| |||  || ||||| ||||| ||||||||| |||||||||||  ||| |||||||  || ||| |||||||    
T  24166562 ctttcgcaccggtttccgatccatcaaaggtgggtgactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaa 24166463  T
Q  344 cccggtattcccc 356  Q
    ||| |||||||||    
T  24166462 cccagtattcccc 24166450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 254 - 362
Target Start/End: Original strand, 40272340 - 40272448
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||| ||||| ||| | || ||||  |||||| || |||||||||| |||||||||||  |||||||||||| || ||||||||||||||| |||||    
T  40272340 ggtttccgacccaccaatggtgaacgacaaatccgacttatgcgtagaggcatgcgcactggccaagcgttgttccccatggaaatcgaacccgatattc 40272439  T
Q  354 cccagatac 362  Q
    ||| |||||    
T  40272440 cccggatac 40272448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 352
Target Start/End: Original strand, 1940779 - 1940881
Alignment:
Q  247 tcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaaccc 346  Q
    |||||||||||| | ||||| ||||| ||| ||| ||||||||||| ||||||||| |||||||||    |||||||||||| |||||| ||||||||||    
T  1940779 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 1940875  T
Q  347 ggtatt 352  Q
    | ||||    
T  1940876 gatatt 1940881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 42722375 - 42722489
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||| ||| | ||||| ||  | ||||||| ||||||| ||||||| |||||  |||||||||| ||||| ||||||| |||||| ||||    
T  42722375 tttctttcgcaccgattttcgacccaccattggtggacgactaatccgactcatgcatagaggtatgcgcactggtcaagtgttgttc-ccctgggaatc 42722473  T
Q  341 gaacccggtattcccc 356  Q
     |||||||||||||||    
T  42722474 aaacccggtattcccc 42722489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 352
Target Start/End: Original strand, 48317279 - 48317382
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||| ||||||||||||||||| | ||| ||| ||||||||||| ||||||||| ||| | |||||| ||||||||||||  |||| |||||||| || |    
T  48317279 gcactggtttccaacccatcaacggtgggcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccag 48317378  T
Q  349 tatt 352  Q
    ||||    
T  48317379 tatt 48317382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 241 - 343
Target Start/End: Original strand, 2686451 - 2686553
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||||||||||||||||||  |||| ||||||| |||| ||||||||| ||||||||||  | | || ||||| ||||||  ||||| |||||    
T  2686451 tttctttcgcaccggtttccaacccacaaaaggtggacgactaattcggctcatgtgtagagacatatgtagtggtcaagtgttgtttcccctgaaaatc 2686550  T
Q  341 gaa 343  Q
    |||    
T  2686551 gaa 2686553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 323
Target Start/End: Original strand, 6032643 - 6032721
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgt 323  Q
    |||||||||||||||| ||||| ||||| | ||||| ||||||||||||| ||||||| |||| |||||| ||||||||    
T  6032643 tttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcattcgtagaggcatgagcactggtcaagcgt 6032721  T

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Target: chr4; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 12703544 - 12703654
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| || |||||||| | || | |||| ||| ||| |||||||||| |||||||||||||| | ||||| ||||||||||||| | ||||||||||||    
T  12703544 ctttcacatcggtttccgatcctttaaagatgggcgactaatccggcttatgcgtagagacatacacactggtcaagcgttgttcccactggaaatcgaa 12703643  T
Q  344 cccggtattcc 354  Q
    | | |||||||    
T  12703644 ctcagtattcc 12703654  T

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Target: chr4; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 245 - 343
Target Start/End: Complemental strand, 14859402 - 14859304
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| |||||| || |||||||| |||| || ||||| ||||| ||||||||||||||||||||| |||| | ||||||  |||| ||||||||    
T  14859402 tttcgcaccagtttccgacacatcaaaggtggatgactaatctggctcgtgcgtagagacatgcgcactggtcaaacattgttcctcctgaaaatcgaa 14859304  T

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Target: chr4; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 20128421 - 20128303
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||| | ||||||| |||||  |||| |||||| || |||||||||||  ||||| |||||| |||||  |||||||    
T  20128421 ctttcgcaccggtttctgacccaccaatggtggacgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaa 20128322  T
Q  344 cccggtattccccagatac 362  Q
    ||| ||||||||| |||||    
T  20128321 cccagtattccccggatac 20128303  T

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Target: chr4; HSP #46
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 49260664 - 49260782
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||| ||||| ||||| ||||| ||| ||| ||||||||||| ||||||||| |||||||||||  |||||||||||| || ||| ||| |||    
T  49260664 cttttgcaccgatttccgacccaccaaaggtggtcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaa 49260763  T
Q  344 cccggtattccccagatac 362  Q
      | ||||||||| |||||    
T  49260764 ttcagtattccccggatac 49260782  T

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Target: chr4; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 362
Target Start/End: Original strand, 295529 - 295649
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||| |||||||||||||| |||||| ||| | ||||||| ||||| || || ||||||||| |||||||||||  ||| |||||||| | |||| ||||    
T  295529 tttcattcgcaccggtttcaaacccaccaacggtggacgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttc-ctctgggaatc 295627  T
Q  341 gaacccggtattccccagatac 362  Q
    ||| | |||||||||| |||||    
T  295628 gaatctggtattccccggatac 295649  T

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Target: chr4; HSP #48
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 354
Target Start/End: Complemental strand, 21429416 - 21429303
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||| ||||||||||||||| ||||| ||||| ||||||| || || | ||| ||||||||| |||||||||||   || |||||||| ||||  |||||    
T  21429416 tttcattcgcaccggtttccgacccaccaaaggtggacgactagtctgactcgtgcgtagaggcatgcgcactggctaaacgttgttccccctaaaaatc 21429317  T
Q  341 gaacccggtattcc 354  Q
    ||||||| ||||||    
T  21429316 gaacccgatattcc 21429303  T

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Target: chr4; HSP #49
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 245 - 346
Target Start/End: Original strand, 26237422 - 26237523
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    ||||||| | |||||| ||||||||| | ||||| | ||||||| |||||||||| |||||| |||||||||||| |||||||  |||||  ||||||||    
T  26237422 tttcgcatcagtttccgacccatcaatggtggactactaatccgactcatgcgtaaagacatacgcactgatcaaacgttgtttcccctgagaatcgaac 26237521  T
Q  345 cc 346  Q
    ||    
T  26237522 cc 26237523  T

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Target: chr4; HSP #50
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 45721198 - 45721086
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||||||||||| |||| ||||||| ||||||| ||  ||||||||| || ||||| ||  ||| | || ||  ||||| |||| |||    
T  45721198 ctttcgcaccggtttccaacccattaaaggtggacgactaatccgacttgtgcgtagaggcacgcgcagtggccaaacattatttcccctgaaaatggaa 45721099  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  45721098 cccggtattcccc 45721086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 36262766 - 36262873
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||  ||||||  ||||| ||||| ||| ||| ||||||| ||| ||||||||| |||| ||||||  ||||||||||  ||||||| |||||||    
T  36262766 ctttcgcattggtttctgacccaccaaaggtgggcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgt--tccctgggaatcgaa 36262863  T
Q  344 cccggtattc 353  Q
    ||||||||||    
T  36262864 cccggtattc 36262873  T

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Target: chr4; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 47682381 - 47682451
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||| ||||||| |||||||||||||| ||||||    
T  47682381 ctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactg 47682451  T

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Target: chr4; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 3574483 - 3574556
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||||| ||| ||||||||| |||||||||||  |||| |||||||||||||| ||| |||| ||||||||||    
T  3574483 taatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccc 3574556  T

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Target: chr4; HSP #54
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 245 - 358
Target Start/End: Complemental strand, 13073649 - 13073536
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| ||||| ||||| |  |||| ||||| || ||||||||||||  ||||||||||  ||| | |||||| || ||| ||||||||    
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaac 13073550  T
Q  345 ccggtattccccag 358  Q
     |||||||| ||||    
T  13073549 tcggtattctccag 13073536  T

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Target: chr4; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 262 - 315
Target Start/End: Original strand, 31635764 - 31635817
Alignment:
Q  262 acccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactga 315  Q
    ||||||||||| ||| ||||||||||  ||||||||||||||||||||||||||    
T  31635764 acccatcaaagatgggcgattaatccaactcatgcgtagagacatgcgcactga 31635817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 362
Target Start/End: Complemental strand, 14568033 - 14567953
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||| ||| |||||||||  ||| |||||| ||||||||| |||||||||  ||||||||| ||||||||||| ||||    
T  14568033 taatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatac 14567953  T

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Target: chr4; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 29588848 - 29588740
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| || ||||| ||||| ||| | ||||  | ||||||||||| ||||||||| ||||||||||   ||||| |||||  |||||| |||||||    
T  29588848 ctttcgcatcgatttccgacccaccaatggtggataactaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaa 29588749  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  29588748 cccggtatt 29588740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 268 - 355
Target Start/End: Original strand, 38841391 - 38841476
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||| ||||||| ||||||| |||||||||||||||||  |||||   ||||||||||| |||||  |||||||||| |||||||||    
T  38841391 caaagatggacgactaatccgactcatgcgtagagacat--gcactagacaagcgttgttttccctaaaaatcgaacctggtattccc 38841476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 253 - 313
Target Start/End: Complemental strand, 46108794 - 46108734
Alignment:
Q  253 cggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcact 313  Q
    |||||||| ||||||||||  ||||||| ||||| ||||||||||||||| ||||||||||    
T  46108794 cggtttccgacccatcaaaagtggacgactaatctggctcatgcgtagaggcatgcgcact 46108734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 335
Target Start/End: Complemental strand, 18531631 - 18531540
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctgg 335  Q
    ||||||||||||||||| |||||  |||| ||||||| ||||| || || ||| | ||| |||||||||||| |||| ||||||| ||||||    
T  18531631 ctttcgcaccggtttccgacccacaaaaggtggacgaataatctggttcgtgcatggaggcatgcgcactgaccaagtgttgttccccctgg 18531540  T

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Target: chr4; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 243 - 314
Target Start/End: Complemental strand, 31588799 - 31588728
Alignment:
Q  243 tctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    ||||||||| |||||||| | ||| ||||  ||  ||| |||||||||||||||||||||||||||||||||    
T  31588799 tctttcgcatcggtttccgatccaccaaaagtgagcgactaatccggctcatgcgtagagacatgcgcactg 31588728  T

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Target: chr4; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 268 - 362
Target Start/End: Original strand, 21055242 - 21055336
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||| || ||||||||||| | |||||| ||||||||||||||| ||||||   || ||||| ||| |||||||| ||| ||||| ||||||||    
T  21055242 caaagatgtacgattaatccagttcatgcatagagacatgcgcacggatcaaatattattctctctgaaaatcgaatccgatattctccagatac 21055336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 362
Target Start/End: Complemental strand, 27248541 - 27248422
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||| |||| |||||  ||| | ||||| ||| ||| ||||| ||||| ||||||||| |||||||  ||  ||||||||||||  ||||| | ||    
T  27248541 tttctttcacaccagtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactc 27248444  T
Q  341 gaacccggtattccccagatac 362  Q
    |||||||||||||||| |||||    
T  27248443 gaacccggtattccccggatac 27248422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 241 - 315
Target Start/End: Complemental strand, 54946364 - 54946290
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactga 315  Q
    |||||||| | ||||||||| ||||| ||| | ||| ||| ||||||||||||||||||||| |||||| |||||    
T  54946364 tttctttcacgccggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcggactga 54946290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 14567354 - 14567281
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    |||||||||||||| ||||| ||||| |||||  |  ||| ||||||||||| ||||||||| |||||||||||    
T  14567354 tttctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactg 14567281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 254 - 362
Target Start/End: Original strand, 55005317 - 55005423
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||| |||||||||  |||| ||| ||||||| ||  ||||||||| |||||||| || ||||||||||||  |||||  |||||||  |||||||     
T  55005317 ggtttccgacccatcaa--ttgggcgactaatccgacttgtgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtattt 55005414  T
Q  354 cccagatac 362  Q
    |||||||||    
T  55005415 cccagatac 55005423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 24850626 - 24850710
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||||| |||||||| | |||  || | |||| || |||||| |||||||||||||| ||||||||||| ||||| |||||||    
T  24850626 ctttcgcatcggtttccgatccaataatggtggatgaataatccagctcatgcgtagaggcatgcgcactggtcaagtgttgttc 24850710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 265 - 357
Target Start/End: Original strand, 26479969 - 26480061
Alignment:
Q  265 catcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccca 357  Q
    |||||| | |||||||||||| |||||||||||||||| |||||| ||||  |||| ||| ||| || |   |||||||| ||||||||||||    
T  26479969 catcaatgatggacgattaattcggctcatgcgtagaggcatgcgtactggccaagtgttattccccttaagaatcgaactcggtattcccca 26480061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 30317345 - 30317233
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| || |||||||| ||||| ||||| ||| ||| |||| |||||| ||||||||| ||| || ||||  |||||||||||| | |||  |||||||    
T  30317345 ctttcacatcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttccctctgagaatcgaa 30317246  T
Q  344 cccggtattcccc 356  Q
    || | ||||||||    
T  30317245 cctgatattcccc 30317233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 255 - 362
Target Start/End: Complemental strand, 3507371 - 3507265
Alignment:
Q  255 gtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    |||||| | ||| ||||| ||||||| ||||||||||| || |||||| || |||||||   |||||||||||| || ||| ||||||||||| |||||     
T  3507371 gtttccgatccaccaaaggtggacgactaatccggctcgtgtgtagaggcacgcgcactagccaagcgttgttc-ccttgggaatcgaacccgatattct 3507273  T
Q  355 ccagatac 362  Q
    || |||||    
T  3507272 ccggatac 3507265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 21192752 - 21192636
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | || || ||||  ||| ||||||||||| ||| ||||||||| |||||||||||  | | ||||||  |||  |||| |||||    
T  21192752 ctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgt--tcctcggaactcgaa 21192655  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||| |||| ||||    
T  21192654 cccggtatttcccaaatac 21192636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 327
Target Start/End: Original strand, 55703751 - 55703834
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    ||||| ||||| ||| | |||||| |||| ||||| | ||||||||||| || || |||||||||||||||| ||| |||||||    
T  55703751 ctttcacaccgattttcgacccataaaagatggacaactaatccggctcgtgggttgagacatgcgcactgaccaaacgttgtt 55703834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 362
Target Start/End: Complemental strand, 8824644 - 8824558
Alignment:
Q  276 gacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||| ||||| | ||| |||||||||  |||| ||||||||||||||| || || || | ||||||| ||||||||||| ||||||    
T  8824644 gacgactaatctgcctcgtgcgtagaggtatgcacactgatcaagcgtttttttctcttggaatcgaatccggtattccctagatac 8824558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 356
Target Start/End: Complemental strand, 13436858 - 13436812
Alignment:
Q  310 cactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||||| |||||||||||| | |||| ||||||||||||||||||||    
T  13436858 cactgaccaagcgttgttccctctgggaatcgaacccggtattcccc 13436812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 14597899 - 14597969
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    |||| |||||||||| | | ||||||||| ||||||| |||||| | || ||||||||| |||||||||||    
T  14597899 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactg 14597969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 302
Target Start/End: Original strand, 25406562 - 25406620
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagag 302  Q
    ||||||||||||||||| ||||||||||| || |||| ||||| |  ||||||||||||    
T  25406562 ctttcgcaccggtttccgacccatcaaaggtgaacgactaatctgattcatgcgtagag 25406620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 269 - 319
Target Start/End: Complemental strand, 28945018 - 28944968
Alignment:
Q  269 aaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaa 319  Q
    |||| ||||||| ||||||| |||||||||||||||||| |||||| ||||    
T  28945018 aaagatggacgactaatccgactcatgcgtagagacatgtgcactggtcaa 28944968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 264 - 362
Target Start/End: Original strand, 41162901 - 41162999
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| ||| ||| |||| |||||||||| ||||  ||||  |||||  |||| ||||||| | ||||||||||||| ||||||| ||| |||||    
T  41162901 ccatcaaaggtgggcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatac 41162999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 256 - 330
Target Start/End: Complemental strand, 53354632 - 53354558
Alignment:
Q  256 tttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctc 330  Q
    ||||| ||||||||||| || |||| |||||||  | |||||||||| ||||||||||| | ||| |||||||||    
T  53354632 tttccgacccatcaaagatgaacgactaatccgatttatgcgtagaggcatgcgcactggttaagtgttgttctc 53354558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 13552209 - 13552156
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagag 302  Q
    |||||||||||| | ||||||| | |||| || |||||||||||||||||||||    
T  13552209 gcaccggtttcctatccatcaatggtggatgactaatccggctcatgcgtagag 13552156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 73; Significance: 3e-33; HSPs: 73)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 73; E-Value: 3e-33
Query Start/End: Original strand, 246 - 362
Target Start/End: Complemental strand, 34356311 - 34356195
Alignment:
Q  246 ttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacc 345  Q
    |||||||  |||||| ||||||||| | || |||||||||||||||||||| ||||| |||||||||||| |||| ||||||| ||||||||||||||||    
T  34356311 ttcgcactcgtttccgacccatcaatggtgcacgattaatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacc 34356212  T
Q  346 cggtattccccagatac 362  Q
    |||||||||||||||||    
T  34356211 cggtattccccagatac 34356195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 25540403 - 25540521
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||||||||||| ||||||||| |||||||||||  |||||||||||| |||| | |||||||    
T  25540403 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaa 25540502  T
Q  344 cccggtattccccagatac 362  Q
    ||| |||||||||||||||    
T  25540503 cccagtattccccagatac 25540521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 12864331 - 12864219
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||| |||||||||| |||| |||||||||||| |||| ||||||| ||||||||||||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaa 12864232  T
Q  344 cccggtattcccc 356  Q
     ||||||||||||    
T  12864231 tccggtattcccc 12864219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 18902529 - 18902641
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||| ||||| |||||||||||| |||||||| ||||||||||||| || ||| |||||||    
T  18902529 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaa 18902628  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  18902629 cccggtattcccc 18902641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 242 - 362
Target Start/End: Complemental strand, 38962872 - 38962752
Alignment:
Q  242 ttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcg 341  Q
    |||||||||||| |||||  ||||| ||||| ||||||| |||||||| |||||||||||| |||||||||||  ||||||||||||  |||| ||||||    
T  38962872 ttctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatcg 38962773  T
Q  342 aacccggtattccccagatac 362  Q
    ||||||||||||||| |||||    
T  38962772 aacccggtattccccggatac 38962752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 362
Target Start/End: Complemental strand, 2550978 - 2550857
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||| ||||||| ||||  ||| ||| |||||||||||||||||||||||||||||||||   ||| |||||||  ||||| ||||    
T  2550978 tttctttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatc 2550879  T
Q  341 gaacccggtattccccagatac 362  Q
    ||||||| |||||||| |||||    
T  2550878 gaacccgatattccccggatac 2550857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 362
Target Start/End: Original strand, 6358147 - 6358268
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||| ||||||||| | ||||| ||| | ||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||||||||||    
T  6358147 tttctttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatc 6358246  T
Q  341 gaacccggtattccccagatac 362  Q
    ||| | |||||||||| |||||    
T  6358247 gaatctggtattccccggatac 6358268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 249 - 350
Target Start/End: Complemental strand, 10669694 - 10669593
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||||| ||||| ||||| || |||||||||||| ||| |||||||||||||||||||||  ||||||||||||||||||| |||| |||||||    
T  10669694 gcaccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctccctgggaatcaaacccgg 10669595  T
Q  349 ta 350  Q
    ||    
T  10669594 ta 10669593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 14169608 - 14169720
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | | ||||| ||||||||||||||||||||||||||||||||| ||||| ||||||| ||| |  |||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaa 14169707  T
Q  344 cccggtattcccc 356  Q
    |||| ||||||||    
T  14169708 cccgatattcccc 14169720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 41220742 - 41220630
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  |||| || |||| |||| |||||||||||||||| |||||||||||  ||||||||||||  ||||| |||||||    
T  41220742 ctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 41220643  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  41220642 cccggtattcccc 41220630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 360
Target Start/End: Complemental strand, 44139591 - 44139475
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||  | ||| ||| ||||||||||| ||||||||| || ||||||||  |||||||||||| |||||| |||||||    
T  44139591 ctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaa 44139492  T
Q  344 cccggtattccccagat 360  Q
    |||||||||||||||||    
T  44139491 cccggtattccccagat 44139475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Complemental strand, 331598 - 331496
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||||||||| ||||| ||| ||| ||||||||||||||||||||  |||||||||||  |||| ||||||| |||||| |||||||||||||||||    
T  331598 ggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattc 331499  T
Q  354 ccc 356  Q
    |||    
T  331498 ccc 331496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 34722787 - 34722685
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  | ||||||||| ||| ||| ||||||||||| |||||||||||||| ||||||| ||||||||||||||||||  |||||||    
T  34722787 ctttcgcaccggtttctgatccatcaaaggtgggcgactaatccggctcgtgcgtagagacatgtgcactgaccaagcgttgttctccctgagaatcgaa 34722688  T
Q  344 ccc 346  Q
    |||    
T  34722687 ccc 34722685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 37560280 - 37560170
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||||||| | ||||||||||| ||||||||||||||||||| ||||||||| |||||||||||| ||| |||||||| || ||  |||||||    
T  37560280 ctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaa 37560181  T
Q  344 cccggtattcc 354  Q
    || ||||||||    
T  37560180 cctggtattcc 37560170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 241 - 362
Target Start/End: Original strand, 19976803 - 19976924
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||| ||||| |  |||||||| ||| ||| |||| || || ||||||||||||||||||||||| ||| |||| ||| ||||| |||||    
T  19976803 tttctttcgcaccgatttccgattcatcaaaggtgggcgactaattcgacttatgcgtagagacatgcgcactgaccaaacgttattccccctgaaaatc 19976902  T
Q  341 gaacccggtattccccagatac 362  Q
    |||||||||||||||| |||||    
T  19976903 gaacccggtattccccggatac 19976924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 10823167 - 10823055
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  |||| ||| ||| ||||||||||| ||||||||| |||||||||||  ||||||||||||  ||||| |||| ||    
T  10823167 ctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaa 10823068  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  10823067 cccggtattcccc 10823055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 12455417 - 12455305
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||  ||| ||||||||||| ||||||||| |||||||||||   ||||||||||  ||||||||||||||    
T  12455417 ctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaa 12455318  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  12455317 cccggtattcccc 12455305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 3643886 - 3644004
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| ||||||||  |||| ||||| ||||||| |||||| |||||||||||||| |||||||||||  ||||||||||||  | | |||||| ||    
T  3643886 ctttcgcaacggtttccggcccaccaaaggtggacgactaatccagctcatgcgtagaggcatgcgcactggccaagcgttgttcctcgtagaaatcaaa 3643985  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  3643986 cccggtattccccggatac 3644004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 7747381 - 7747263
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  |||| || |||| ||||||||||||||||||||| ||||| |||||  ||| ||||||||  ||| | |||||||    
T  7747381 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaa 7747282  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  7747281 cccggtattccccggatac 7747263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 22593240 - 22593130
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||| || ||||| ||||| ||||||| ||||||||||||||||||||| |||||||||||  ||| |||||||| |||||| |||||||    
T  22593240 ctttcgcaccggtt-ccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaa 22593143  T
Q  344 cccggtattcccc 356  Q
    | | |||||||||    
T  22593142 ctcagtattcccc 22593130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 38005509 - 38005397
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| | ||| ||||| ||| ||| |||||||||||||| |||||| |||||||||||  |||||||||||| || ||| |||||||    
T  38005509 ctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaa 38005410  T
Q  344 cccggtattcccc 356  Q
    ||| |||||||||    
T  38005409 cccagtattcccc 38005397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 278 - 361
Target Start/End: Original strand, 45263700 - 45263783
Alignment:
Q  278 cgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagata 361  Q
    ||||||||||||||| ||||||||| |||||||||||  |||||||||||| | |||| |||||||||||||||||||| ||||    
T  45263700 cgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccggata 45263783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 3811690 - 3811800
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||  ||||| ||||| ||| ||| ||||||||||||||||||||| |||||||| ||| |||| ||||||| | |||| |||||||    
T  3811690 ctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaa 3811789  T
Q  344 cccggtattcc 354  Q
    |||| ||||||    
T  3811790 cccgatattcc 3811800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 21286551 - 21286433
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||||||||||| ||| | ||   || |||||| |||| ||||||||| ||||||||||| ||||||||||||   ||||| |||||||    
T  21286551 cttttgcaccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaa 21286452  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  21286451 cccggtattccccggatac 21286433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 8410238 - 8410129
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||  ||||  ||| ||| ||||||||||| ||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  8410238 ctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 8410139  T
Q  344 cccggtattc 353  Q
    |||| |||||    
T  8410138 cccgatattc 8410129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 255 - 352
Target Start/End: Original strand, 10026626 - 10026723
Alignment:
Q  255 gtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||| ||||| ||||| ||| ||| ||||||||||||||||||||| |||||||||||  ||| |||||||| |||||  ||||||||||||||||    
T  10026626 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaacccggtatt 10026723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 241 - 354
Target Start/End: Complemental strand, 16035047 - 16034934
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||||| || |||||| | ||  ||| ||||||||||| | |||| || ||||| ||||| |||||||||||||  |||| |||||    
T  16035047 tttctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatc 16034948  T
Q  341 gaacccggtattcc 354  Q
    ||||||||||||||    
T  16034947 gaacccggtattcc 16034934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 16325702 - 16325602
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||| ||||||||||||||| ||||| |||||  |||| ||||||| |||||| |||||||    
T  16325702 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 16325603  T
Q  344 c 344  Q
    |    
T  16325602 c 16325602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 20116611 - 20116695
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||||| ||||||||||| ||||||  ||||||||||||||||||||| |||||||| ||  || |||||||||    
T  20116611 ctttcgcaccggtttccgacccatcaaaggtggacggctaatccggctcatgcgtagaggcatgcgcattggccatgcgttgttc 20116695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 42770650 - 42770758
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| ||| |||||| | ||||| ||||| ||||||||||||||||||| |||| |||| |||||||||||  |||||||||||| |||||  ||| |||    
T  42770650 cttttgcatcggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaa 42770749  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  42770750 cccggtatt 42770758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 249 - 356
Target Start/End: Complemental strand, 7787158 - 7787051
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||| | | ||| ||||| ||| ||| ||||||||||| ||||||||| |||||| ||||  ||||  |||||| |||||||||||||||||||    
T  7787158 gcaccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccgg 7787059  T
Q  349 tattcccc 356  Q
    ||||||||    
T  7787058 tattcccc 7787051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 355
Target Start/End: Original strand, 41031905 - 41032016
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||| ||||| ||||| |||  || ||||||||||| ||||||||| ||||| |||||  |||| ||||||| |||||| |||||||    
T  41031905 ctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 41032004  T
Q  344 cccggtattccc 355  Q
    |||||| |||||    
T  41032005 cccggtgttccc 41032016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 3848913 - 3849031
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||  ||| | ||||||||||| || |||| ||||||| ||| ||||||||||||||||| |||  ||| |||||||  |||||  |||||||    
T  3848913 ctttcgcaccaattttcgacccatcaaaggtgaacgactaatccgactcgtgcgtagagacatgcgccctggccaaacgttgtttcccctgataatcgaa 3849012  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||| ||||||||    
T  3849013 cccggtattctccagatac 3849031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 346
Target Start/End: Complemental strand, 5035395 - 5035293
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||  ||||||| |||||| |||| |||| ||||||||||| || ||||||||||||||||||||| |||||| ||||| |  |||| |||||||    
T  5035395 ctttcgcatgggtttccgacccattaaaggtggatgattaatccggttcgtgcgtagagacatgcgcactggtcaagcattgttttttctgggaatcgaa 5035296  T
Q  344 ccc 346  Q
    |||    
T  5035295 ccc 5035293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 34346286 - 34346400
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||  ||||||||| | ||||||||||||| ||||| |||||  |||| ||||||| |||||  |||| ||    
T  34346286 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatctgactcatgcgtagaggcatgcacactggccaagtgttgttccccctgataatcaaa 34346385  T
Q  344 cccggtattccccag 358  Q
    ||| |||||||||||    
T  34346386 cccagtattccccag 34346400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 35946845 - 35946728
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||| ||| | ||||||| ||||||||||| ||||||||| ||||| || ||  |||||||||||| |||| | |||||||    
T  35946845 ctttcgcaccagtttccgacccaccaatggtggacgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttc-ccctaggaatcgaa 35946747  T
Q  344 cccggtattccccagatac 362  Q
    | ||||||||||| |||||    
T  35946746 ctcggtattccccggatac 35946728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 354
Target Start/End: Complemental strand, 2785038 - 2784930
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| || |||||| | ||||||| ||||| | ||||||||||||| |||||||||||| |||   ||||| |||||| |||||||||    
T  2785038 tttcgcaccggtttccgactcatcaatgatggacgactaatctgactcatgcgtagaggcatgcgcactgaccaaatcttgtt-tccctgaaaatcgaac 2784940  T
Q  345 ccggtattcc 354  Q
     |||||||||    
T  2784939 tcggtattcc 2784930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 20612534 - 20612647
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaat-ccggctcatgcgtagagacatgcgcactgatcaagcgttgttctc-cctggaaatcga 342  Q
    |||||||||||||||| ||||| ||| | ||||||| |||| ||||||||||| ||||| |||||||||||  |||| ||||||| | ||||  ||||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcga 20612633  T
Q  343 acccggtattcccc 356  Q
    ||||||||||||||    
T  20612634 acccggtattcccc 20612647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 255 - 362
Target Start/End: Original strand, 10046487 - 10046593
Alignment:
Q  255 gtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctgga-aatcgaacccggtattc 353  Q
    |||||| ||||| ||||| ||| ||| ||||||||||||||||||||| ||||||||||| |||| ||||||| ||||| || |||||||||||||||||    
T  10046487 gtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactg-tcaaacgttgtt-tcccttgagaatcgaacccggtattc 10046584  T
Q  354 cccagatac 362  Q
     || |||||    
T  10046585 tccggatac 10046593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 288 - 356
Target Start/End: Complemental strand, 15079546 - 15079478
Alignment:
Q  288 ggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    ||||| ||||||||| ||||| ||||| ||||||||||||| ||||||||||||||||| |||||||||    
T  15079546 ggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattcccc 15079478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 29422322 - 29422210
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| ||||| | ||||||||| ||||||| ||||||||||| |||||| ||  |||| || ||  |||| ||||||| | ||||||||||||    
T  29422322 ctttcgcaccgatttccgatccatcaaaggtggacgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaa 29422223  T
Q  344 cccggtattcccc 356  Q
    ||| |||||||||    
T  29422222 cccagtattcccc 29422210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 29653729 - 29653626
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||    |||| ||| ||| |||| |||||| ||||||||| |||||||||||  ||||||||||| |||||||||||||||    
T  29653729 ctttcgcaccggtttcccacc----aaaggtgg-cgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaa 29653635  T
Q  344 cccggtatt 352  Q
     ||||||||    
T  29653634 tccggtatt 29653626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 2528340 - 2528450
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| || ||  |||| ||  ||| |||||||||| ||| |||||| ||||| |||||| |||||||||||| |||||| |||||||    
T  2528340 ctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaa 2528439  T
Q  344 cccggtattcc 354  Q
    |||||| ||||    
T  2528440 cccggtgttcc 2528450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 28616378 - 28616488
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  |||||  |||| ||| ||| ||||| ||||| ||||||||| |||||||||||  |||| ||| ||| ||||| ||||||||    
T  28616378 ctttcgcaccggtttctgacccactaaagatgggcgactaatctggctcgtgcgtagaggcatgcgcactgcccaagtgttattccccctgaaaatcgaa 28616477  T
Q  344 cccggtattcc 354  Q
    |||| ||||||    
T  28616478 cccgatattcc 28616488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 293 - 355
Target Start/End: Original strand, 40968963 - 40969025
Alignment:
Q  293 atgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    |||||||||| ||| |||||||| ||| ||||||| |||||||||||||||||||||||||||    
T  40968963 atgcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattccc 40969025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 345
Target Start/End: Complemental strand, 24179675 - 24179575
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| ||||||||||  |||||| ||||| ||||||| ||||||||||||||||||||| |||| ||||||  ||| |||||||| |||||  |||||||    
T  24179675 cttttgcaccggtttttaacccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttc-ccctgagaatcgaa 24179577  T
Q  344 cc 345  Q
    ||    
T  24179576 cc 24179575  T

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Target: chr2; HSP #47
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 354
Target Start/End: Complemental strand, 33005861 - 33005749
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||| |||||||| |||||  |||| ||  ||||||||| | ||||||||||||| |||||||||||  |||| ||||||| |||||| ||      
T  33005861 tttctttcgcatcggtttccgacccactaaaggtgagcgattaatctgcctcatgcgtagaggcatgcgcactggccaagtgttgttc-ccctgggaaca 33005763  T
Q  341 gaacccggtattcc 354  Q
    ||||||||||||||    
T  33005762 gaacccggtattcc 33005749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 28525454 - 28525554
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttg-ttctccctggaaatcga 342  Q
    ||||| |||| |||||| |||||| |||| |||| || ||||||||||| ||||||||| |||||||||||  |||| |||| ||| |||||||||||||    
T  28525454 ctttcacaccagtttccgacccattaaaggtggatgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccccctggaaatcga 28525553  T
Q  343 a 343  Q
    |    
T  28525554 a 28525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 250 - 354
Target Start/End: Original strand, 39201513 - 39201617
Alignment:
Q  250 caccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggt 349  Q
    ||||||||||| ||||| ||||| || |||| ||||||||||||||||||||| ||||| |||||  ||| | |||||| |||||  |||||||  ||||    
T  39201513 caccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggt 39201612  T
Q  350 attcc 354  Q
    |||||    
T  39201613 attcc 39201617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 9360744 - 9360859
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||||||||||||  ||||  |||| ||| ||| |||| |||||| ||||||||| |||||||||||  ||| |||||||  | || | ||||    
T  9360744 tttctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcctctagtaatc 9360843  T
Q  341 gaacccggtattcccc 356  Q
    ||||| ||||||||||    
T  9360844 gaacctggtattcccc 9360859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 352
Target Start/End: Original strand, 43303292 - 43303399
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||| ||||  ||||||||  | ||| |||||||||| |||| ||| ||||| |||||| |||| ||||||||||||| || || |||||||||    
T  43303292 tttcgcaccgatttctgacccatcattgatgggcgattaatccagctcgtgcatagaggcatgcgtactggtcaagcgttgttccccttgaaaatcgaac 43303391  T
Q  345 ccggtatt 352  Q
    ||| ||||    
T  43303392 ccgatatt 43303399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 355
Target Start/End: Original strand, 18649022 - 18649136
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||||| |||||||||||||| ||||  ||  ||| ||||||| ||||||||||||| |||||||||||  |||   ||||||  ||||  ||||    
T  18649022 tttctttcgcaacggtttccaacccaccaaaagtgagcgactaatccgactcatgcgtagaggcatgcgcactgcccaaatattgttcctcctgagaatc 18649121  T
Q  341 gaacccggtattccc 355  Q
    ||| |||||||||||    
T  18649122 gaatccggtattccc 18649136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 44945700 - 44945592
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | |||  |||| ||| ||| ||||||||||| ||||||||| ||||||||||   |||||||||||| | |||| |||| ||    
T  44945700 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttc-ctctgggaatcaaa 44945602  T
Q  344 cccggtattc 353  Q
    ||| ||||||    
T  44945601 cccagtattc 44945592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 15234060 - 15234172
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||| ||||||| || |||| |||||   ||  ||||||||| ||||||||||| ||||| ||||||| |||||  |||||||    
T  15234060 ctttcgcatcggtttccgacctatcaaagatgaacgactaatctaacttgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgagaatcgaa 15234159  T
Q  344 cccggtattcccc 356  Q
    ||  |||||||||    
T  15234160 cctagtattcccc 15234172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 16813164 - 16813248
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||| | ||||||||| | ||||| ||||||| ||||||||||| ||| ||||| |||||| |||| |||| ||||||||    
T  16813164 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttc 16813248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 16852443 - 16852527
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||| | ||||||||| | ||||| ||||||| ||||||||||| ||| ||||| |||||| |||| |||| ||||||||    
T  16852443 ctttcgcactgatttccaacctaccaaagatggacgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttc 16852527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 353
Target Start/End: Original strand, 21180351 - 21180422
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||||||| ||||||||| |||| ||||||  |||| |||||||||| ||| ||||||| |||||||||    
T  21180351 taatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattc 21180422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 277 - 352
Target Start/End: Complemental strand, 25604668 - 25604594
Alignment:
Q  277 acgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||||||||  ||||||||||||| |||||  |||| |||| |||||||| |||||||||||||| ||||||||    
T  25604668 acgattaatccaactcatgcgtagaggcatgcatactggtcaaacgttgttc-ccctggaaatcgaatccggtatt 25604594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 299
Target Start/End: Complemental strand, 44023402 - 44023347
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgta 299  Q
    ||||||||||||||||||||||| ||||| ||||||| |||| || ||||||||||    
T  44023402 ctttcgcaccggtttccaacccaccaaagatggacgactaattcgactcatgcgta 44023347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #60
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 245 - 311
Target Start/End: Complemental strand, 21642056 - 21641990
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgca 311  Q
    |||||||||||||| | ||||| |||||  || |||||||| |||||||||||||||| ||||||||    
T  21642056 tttcgcaccggttttcgacccaccaaaggcgggcgattaattcggctcatgcgtagaggcatgcgca 21641990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #61
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 25549815 - 25549717
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| ||||||| ||||||||||| ||||||||| |||| |||||   |||  |||||| |||||   |||||||||| |||||||||| ||||    
T  25549815 ccatcaaagatggacgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatac 25549717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #62
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 13026448 - 13026521
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||||||||||||||||||| |||||||||||  ||| | ||||||  ||||  ||||||||||| |||||||    
T  13026448 taatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccc 13026521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #63
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 31596431 - 31596488
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtaga 301  Q
    |||||||||||||||||||  |||||||| | |||||||||| | |||||||||||||    
T  31596431 ctttcgcaccggtttccaattcatcaaaggtagacgattaattcagctcatgcgtaga 31596488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 345
Target Start/End: Original strand, 34130333 - 34130401
Alignment:
Q  276 gacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacc 345  Q
    ||||| ||||| |||||||||||||||||||| ||| || |||| ||||||||| |||| ||||||||||    
T  34130333 gacgactaatctggctcatgcgtagagacatgtgcaatggtcaaacgttgttct-cctgaaaatcgaacc 34130401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 327
Target Start/End: Complemental strand, 41187918 - 41187873
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    ||||||| ||||||||||||| ||||||||||| ||||||||||||    
T  41187918 taatccgtctcatgcgtagaggcatgcgcactggtcaagcgttgtt 41187873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 44773370 - 44773281
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccct 333  Q
    ||||||||||||||||| ||||||||||| ||  ||| |||||||||||| ||  |||| ||||| |||||  ||| ||||||| |||||    
T  44773370 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcacgcacagaggcatgcacactggccaaacgttgttttccct 44773281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #67
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 241 - 297
Target Start/End: Complemental strand, 792264 - 792208
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcg 297  Q
    ||||||| |||||||||||| ||||| ||||| ||| ||| ||||||||||||||||    
T  792264 tttcttttgcaccggtttccgacccaccaaagatgggcgactaatccggctcatgcg 792208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #68
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 39806884 - 39806996
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||   | ||| ||||| |||| || ||||||| ||| || |||||| |||||||||||  ||| |||||||   | ||| |||||||    
T  39806884 ctttcgcaccggtttatgaaccaccaaaggtggatgactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaa 39806983  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  39806984 cccggtattcccc 39806996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #69
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 245 - 314
Target Start/End: Original strand, 36480438 - 36480504
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    |||||||||| ||| | ||||||||||| ||||||| |   ||||||||||||||||| |||||||||||    
T  36480438 tttcgcaccgattttcgacccatcaaaggtggacgact---ccggctcatgcgtagaggcatgcgcactg 36480504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #70
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 330
Target Start/End: Original strand, 13104824 - 13104910
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctc 330  Q
    ||||| |||| |||| | ||| ||||||| | ||||| ||||   |||||||||||||| |||||||||||  ||||||||||||||    
T  13104824 ctttcacaccagttttcgacctatcaaaggtagacgactaatttagctcatgcgtagaggcatgcgcactggccaagcgttgttctc 13104910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #71
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 282 - 328
Target Start/End: Original strand, 30721892 - 30721938
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||| ||||| |||||||||||||||||||| |||| |||||||    
T  30721892 taatccgactcatacgtagagacatgcgcactgaccaagtgttgttc 30721938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #72
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 27726047 - 27725963
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||| ||||||||||| ||||| ||  | ||| ||| ||||||||||  ||||||||| |||||||||||  ||||| ||||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttc 27725963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #73
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 290 - 362
Target Start/End: Complemental strand, 41187770 - 41187698
Alignment:
Q  290 ctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||||||| ||||  ||||| ||||| ||||||| ||||   |||||||||||||||||  |||||||    
T  41187770 ctcatgcgtagaggcatggacactggtcaagtgttgttccccctcataatcgaacccggtattcttcagatac 41187698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 72; Significance: 1e-32; HSPs: 63)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 241 - 356
Target Start/End: Original strand, 38578863 - 38578978
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||||||| |||||||||||  |||||||||||| |||||| ||||    
T  38578863 tttctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctgggaatc 38578962  T
Q  341 gaacccggtattcccc 356  Q
    ||||||| ||||||||    
T  38578963 gaacccgatattcccc 38578978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 241 - 356
Target Start/End: Complemental strand, 22573925 - 22573811
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||| || ||||||||||| ||||  ||||||| ||||| |||||    
T  22573925 tttctttcgcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttgttc-ccctgaaaatc 22573827  T
Q  341 gaacccggtattcccc 356  Q
    ||||||| ||||||||    
T  22573826 gaacccgatattcccc 22573811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 48804793 - 48804675
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| |||||||||||  |||| ||||||| || ||| |||||||    
T  48804793 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaa 48804694  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  48804693 cccggtattccccggatac 48804675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 17748381 - 17748493
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||||| ||||||| ||||||||||| | ||||||| |||||||||||  |||||||||||| |||||| |||||||    
T  17748381 ctttcgcatcggtttccgacccaacaaaggtggacgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 17748480  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  17748481 cccggtattcccc 17748493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 43861971 - 43862089
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | | ||| ||||| || | || ||||||||||||||||||||| |||||||||||  ||| |||||||| |||||| |||||||    
T  43861971 ctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaa 43862070  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||||||||||||    
T  43862071 cccggtattccccagatac 43862089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 1797570 - 1797460
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||| | | ||||||||| ||||||| || |||||||| |||||||||||||||||||||  |||||||||||  |||||| |||||||    
T  1797570 cttttgcaccggttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaa 1797471  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  1797470 cccggtattcc 1797460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 10047875 - 10047993
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| |||| | |||||||||||||| | |||||||||  |||| ||||||| |||||| |||||||    
T  10047875 ctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaa 10047974  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  10047975 cccggtattccccggatac 10047993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 29152050 - 29151940
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||||||| | | |||||||||||||| || || |||||| ||||||||||| |||| ||||||||| ||||| |||||||    
T  29152050 ctttcgcatcggtttccgacccatcaatggtagacgattaatccggatcgtgtgtagaggcatgcgcactggtcaaacgttgttcttcctgggaatcgaa 29151951  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  29151950 cccggtattcc 29151940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 13095968 - 13095856
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||||| ||||| ||||| ||  ||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| ||| |||    
T  13095968 cttttgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaa 13095869  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  13095868 cccggtattcccc 13095856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 242 - 358
Target Start/End: Complemental strand, 27028391 - 27028275
Alignment:
Q  242 ttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcg 341  Q
    ||||||||||||||||||| ||||| ||||| ||  ||| |||||| ||||||| |||||| |||||||||||  |||| ||||||| ||||||||||||    
T  27028391 ttctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatcg 27028292  T
Q  342 aacccggtattccccag 358  Q
    |||| |||||| |||||    
T  27028291 aacctggtatttcccag 27028275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 37515031 - 37514919
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||||||||| |||||  || | || |||||||||||||||| |||||||||||||||||||||| ||| |||||||| | ||| ||||||||    
T  37515031 ctttcacaccggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaa 37514932  T
Q  344 cccggtattcccc 356  Q
    ||| |||||||||    
T  37514931 cccagtattcccc 37514919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 4195201 - 4195319
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||||||||| ||| | ||||||  ||||||||||||||||||||| ||||||||||   |||  |||||||  |||||||||||||    
T  4195201 ctttcgcatcggtttccaacccaccaatggtggacggctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaa 4195300  T
Q  344 cccggtattccccagatac 362  Q
    | ||||||||||| |||||    
T  4195301 ctcggtattccccggatac 4195319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 1606051 - 1605942
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||| ||||| ||| ||| |||||||||||| || ||||| |||| ||||||  |||||||||||| ||||||||||||||    
T  1606051 ctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaa 1605952  T
Q  344 cccggtattc 353  Q
    || |||||||    
T  1605951 ccaggtattc 1605942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 22974077 - 22973965
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||| ||||||||  ||||| ||||| ||||||| ||||| ||||||||||||||  ||||| |||||  |||||||||||| |||||  |||||||    
T  22974077 ctttcgcgccggtttctgacccaccaaaggtggacgactaatctggctcatgcgtagacgcatgcacactggccaagcgttgttccccctgagaatcgaa 22973978  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  22973977 cccggtattcccc 22973965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 34659336 - 34659224
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | || || ||| | ||| ||| ||||||||||| ||||||||| ||||||||||| ||||||||||||| || ||  |||||||    
T  34659336 ctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaa 34659237  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  34659236 cccggtattcccc 34659224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 274 - 362
Target Start/End: Original strand, 36619283 - 36619371
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||| ||||||||||||||||||||| ||||| |||||  |||| ||||||| |||||| ||||||||||||||||||||| ||||    
T  36619283 tggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaacccggtattccccaaatac 36619371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 39475050 - 39474938
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||| | |||||  |||| ||||||| |||||||||||||||||||||  ||||||||||| |||||||||||| || | | |||||||    
T  39475050 ctttcgcactggttttcgacccactaaaggtggacgactaatccggctcatgcgtagaggtatgcgcactgaccaagcgttgttccccataggaatcgaa 39474951  T
Q  344 cccggtattcccc 356  Q
    |||||||| ||||    
T  39474950 cccggtatacccc 39474938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 246 - 356
Target Start/End: Complemental strand, 18785777 - 18785667
Alignment:
Q  246 ttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacc 345  Q
    ||||||||||||||| ||||| || || || |||| |||||| | |||||||||||| |||||||||||  |||| ||||||| |||| | |||||||||    
T  18785777 ttcgcaccggtttccgacccaccagaggtgaacgactaatccagttcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacc 18785678  T
Q  346 cggtattcccc 356  Q
    |||||||||||    
T  18785677 cggtattcccc 18785667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 21530858 - 21530744
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| |||||||||| ||||| ||||| ||  |||||||| |||||| ||||||||| |||| ||||||| |||| ||||||| |||||| |||| ||    
T  21530858 ctttcgaaccggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaa 21530759  T
Q  344 cccggtattccccag 358  Q
    ||| |||||||||||    
T  21530758 cccagtattccccag 21530744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 240 - 362
Target Start/End: Original strand, 27875083 - 27875205
Alignment:
Q  240 ctttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaat 339  Q
    |||| |||||||||||||| | |||||  |||| ||||||| |||| || ||||||||||||| |||| ||||||  |||| ||| ||| |||||| |||    
T  27875083 ctttttttcgcaccggttttcgacccactaaaggtggacgactaatgcgactcatgcgtagaggcatgtgcactggccaagtgttattccccctgggaat 27875182  T
Q  340 cgaacccggtattccccagatac 362  Q
    |||| ||||||||||||||||||    
T  27875183 cgaatccggtattccccagatac 27875205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 282 - 356
Target Start/End: Complemental strand, 43925584 - 43925510
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||||| |||||||||||||| |||||||||||| |||| ||||||| |||||| ||||||||||||||||||||    
T  43925584 taatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattcccc 43925510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 48244355 - 48244473
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | | ||| ||||| ||  ||| ||||||||||||||||||||| ||  |||||||||||||| |||||| || | ||||| |||    
T  48244355 ctttcgcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggcaaacgcactgatcaagcattgttccccttagaaattgaa 48244454  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||||||| ||||    
T  48244455 cccggtattccccaaatac 48244473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 14650427 - 14650318
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| ||||||| ||||| ||  ||| ||| ||||||||||||||||| |||  |||||| |||||| ||||||  |||||||||||||    
T  14650427 ctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaa 14650328  T
Q  344 cccggtattc 353  Q
    |||| |||||    
T  14650327 cccgatattc 14650318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 3353534 - 3353417
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  | ||||||||| ||||||| ||||||||||| ||||||||| |||||||||||  |||  |||||| ||||||  ||||||     
T  3353534 ctttcgcaccggtttctgatccatcaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtt-tccctgagaatcgat 3353436  T
Q  344 cccggtattccccagatac 362  Q
    |||| ||||||| ||||||    
T  3353435 cccgatattccctagatac 3353417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 42210261 - 42210371
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||| | |||  |||||||||||||| ||||||||| |||||||||||  ||| ||||||| || |||| |||||||    
T  42210261 ctttcgcatcggtttccgacccaccaacggtgggtgattaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaa 42210360  T
Q  344 cccggtattcc 354  Q
     ||||||||||    
T  42210361 gccggtattcc 42210371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 8734685 - 8734802
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||| ||||| ||||| ||| |||||||||||  ||||| |||||| |||  |||||||||    
T  8734685 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttcccccaagaaatcgaa 8734784  T
Q  344 cccggtattccccagata 361  Q
    || | ||||||| |||||    
T  8734785 cctgatattcccgagata 8734802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 253 - 354
Target Start/End: Original strand, 19914711 - 19914811
Alignment:
Q  253 cggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||| ||||||||||||| ||| ||||||||| ||||||||||||||| |||||||| ||  |||||||||||| |  ||| |||||||||| |||||    
T  19914711 cggtttacaacccatcaaaggtgggcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgttc-ctttgggaatcgaacccagtatt 19914809  T
Q  353 cc 354  Q
    ||    
T  19914810 cc 19914811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 48551967 - 48551878
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccct 333  Q
    ||||||||||||||||| | ||||||||| ||||||| ||||||||||||| ||||||| |||||||| ||  ||| |||||||| ||||    
T  48551967 ctttcgcaccggtttccgatccatcaaaggtggacgactaatccggctcatacgtagaggcatgcgcattggccaaccgttgttcaccct 48551878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 354
Target Start/End: Complemental strand, 365212 - 365140
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    ||||| ||||||||||||||| ||||||||||||| |||||||||||  ||||  ||||||||||||||||||    
T  365212 taatcaggctcatgcgtagaggcatgcgcactgattaagcgttgttcctcctgtgaatcgaacccggtattcc 365140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 5069814 - 5069922
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||||| ||| ||| ||||||||||  ||||||||| ||||| ||||    |||||||||||  |||||||||||||    
T  5069814 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaa 5069913  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  5069914 cccggtatt 5069922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 23658289 - 23658189
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||| ||||||  ||||| ||||| ||||||| ||||||||||| || |||||| ||||| |||||  |||||||||||| ||||||||||||||    
T  23658289 cttttgcacaggtttctgacccaccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaa 23658190  T
Q  344 c 344  Q
    |    
T  23658189 c 23658189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 267 - 355
Target Start/End: Complemental strand, 30827379 - 30827291
Alignment:
Q  267 tcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    |||||| | ||||| ||||||||||| ||||||||| |||||| ||||  |||| ||||||||||||| |||||||||| |||||||||    
T  30827379 tcaaaggtagacgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaacctggtattccc 30827291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 39420947 - 39420863
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||| ||||||||||||  |||||||||| | ||||| ||||||||||||||||||||| || ||||||||  ||||||||||||    
T  39420947 cttttgcaccggtttccggcccatcaaaggtagacgactaatccggctcatgcgtagaggcacgcgcactggccaagcgttgttc 39420863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 47341986 - 47341874
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| ||||| ||||| ||| | || ||||  ||||| |||| ||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  47341986 ctttcgcaccgatttccgacccaccaatggtgaacgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 47341887  T
Q  344 cccggtattcccc 356  Q
    | |||||||||||    
T  47341886 ctcggtattcccc 47341874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 49142668 - 49142780
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||  ||| | ||||||||||| ||| | | ||||||||||| ||||||||| |||| ||||||   ||||||||||| |||| | |||||||    
T  49142668 ctttcgcaccaattttcgacccatcaaaggtgggcaactaatccggctcgtgcgtagaggcatgtgcactggctaagcgttgttccccctaggaatcgaa 49142767  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  49142768 cccggtattcccc 49142780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 24969325 - 24969441
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||||||||| ||  ||||||||||| ||  | ||||||| || ||||||||  |||| |||||  |||||||||||||||    
T  24969325 ctttcgcaccggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttgt--tccctggaaatcgaa 24969422  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||  ||||||||    
T  24969423 cccggtattttccagatac 24969441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 328
Target Start/End: Original strand, 29805436 - 29805523
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||||||||||| ||||||| || ||  |||| | ||||||||||  |||||||||||||||||||||||||||| ||| ||||||||    
T  29805436 tttctttcgcactggtttccgactcactaaaggtagacgattaatttggctcatgcgtagagacatgcgcactgaccaaacgttgttc 29805523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 45960007 - 45960114
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||||| | ||||||||| ||  ||| |||||||||| |||||||||| |||||||||||| |||| ||||||  || ||| |||| ||| |||    
T  45960007 gcaccggtttccgatccatcaaaggtgagcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcgg 45960106  T
Q  349 tattcccc 356  Q
    ||||||||    
T  45960107 tattcccc 45960114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 43346778 - 43346896
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||| ||||| ||||| ||  ||| ||||||||||| | ||||||| ||||||||| |  |||| ||||||| || ||  ||| |||    
T  43346778 ctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaa 43346877  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||||||||||||    
T  43346878 cccggtattccccagatac 43346896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 245 - 354
Target Start/End: Original strand, 26423288 - 26423396
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||| ||| | ||||| || |||| ||||| ||||| ||||||||| || | ||||||  |||||||||||  |||||| ||||||||    
T  26423288 tttcgcaccggtttccgacc-accaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaac 26423386  T
Q  345 ccggtattcc 354  Q
    ||||||||||    
T  26423387 ccggtattcc 26423396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 45697189 - 45697305
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| || ||||||| ||||| ||||| ||||||| ||| ||  ||||||||||||| ||||||||||||||||| ||||||| |||||  |||||||    
T  45697189 ctttcgtactggtttccgacccaccaaaggtggacgactaacccaactcatgcgtagaggcatgcgcactgatcaagtgttgttc-ccctgagaatcgaa 45697287  T
Q  344 cccggtattccccagata 361  Q
     | | |||||||| ||||    
T  45697288 tctgatattccccggata 45697305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 247 - 355
Target Start/End: Complemental strand, 14535398 - 14535290
Alignment:
Q  247 tcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaaccc 346  Q
    ||||||| |||||  ||||||||| | ||| ||| |||||| |||| ||||||||| ||||| |||||  |||| ||||||||||||| ||||  |||||    
T  14535398 tcgcaccagtttctgacccatcaatggtgggcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaaccc 14535299  T
Q  347 ggtattccc 355  Q
    |||||||||    
T  14535298 ggtattccc 14535290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 22993366 - 22993478
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||| ||||| ||  ||| |||||||| || ||||||||| ||||| |||||  ||||||||||||  ||| | |||||||    
T  22993366 ctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 22993465  T
Q  344 cccggtattcccc 356  Q
    |||| ||||||||    
T  22993466 cccgatattcccc 22993478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 324
Target Start/End: Complemental strand, 41945583 - 41945503
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgtt 324  Q
    ||||||||||| ||||| || || ||||| ||||||| ||||||||||| ||||||||| |||||||||||  ||||||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 41945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 42032206 - 42032094
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| ||| |||||||| ||||||||||| ||||| | |||| |||||||||||||||   ||| ||||||  ||| |||||||| || ||| |||||||    
T  42032206 ctttagcatcggtttccgacccatcaaaggtggacaactaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaa 42032107  T
Q  344 cccggtattcccc 356  Q
    || ||||||||||    
T  42032106 ccaggtattcccc 42032094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 315
Target Start/End: Complemental strand, 3603467 - 3603396
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactga 315  Q
    ||||||||||| ||||| ||||| ||||  || |||||||||||||||| ||||||||| ||||||||||||    
T  3603467 ctttcgcaccgatttccgacccaccaaaagtgaacgattaatccggctcgtgcgtagaggcatgcgcactga 3603396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 240 - 355
Target Start/End: Original strand, 20247165 - 20247280
Alignment:
Q  240 ctttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaat 339  Q
    |||||||||| || ||||||||||| ||||| | ||||||| ||||||| | | | |||||||||||| | ||||  |||||||||||| || ||  |||    
T  20247165 ctttctttcgtactggtttccaacctatcaatggtggacgactaatccgacccgtacgtagagacatgtgtactgcccaagcgttgttccccatgagaat 20247264  T
Q  340 cgaacccggtattccc 355  Q
    |||||| |||||||||    
T  20247265 cgaacctggtattccc 20247280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 253 - 332
Target Start/End: Original strand, 41267932 - 41268011
Alignment:
Q  253 cggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccc 332  Q
    |||||||| ||||||||||| ||||||| |||||   ||||||||||||| ||||| |||| |||||||||| |||||||    
T  41267932 cggtttccgacccatcaaaggtggacgactaatctaactcatgcgtagaggcatgcacactaatcaagcgttattctccc 41268011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 313
Target Start/End: Original strand, 24983417 - 24983487
Alignment:
Q  244 ctttcgcaccggtttcca-acccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcact 313  Q
    |||||||| ||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| ||||||||||    
T  24983417 ctttcgcatcggtttccagacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcact 24983487  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 10317745 - 10317856
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||| ||||| ||  ||| ||||| | || |||| ||||| ||| |||||||| |||| ||| ||| |||||| |||||||    
T  10317745 ctttcgcaccggtttccgatccaccaaaggtgagcgactaatctg-cttatgcatagaggcatacgcactgaccaagtgttattccccctgggaatcgaa 10317843  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  10317844 cccggtattcccc 10317856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 44336973 - 44336885
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| ||| | ||| ||||||||| |||||||||||| ||| |||| || | |||||||||||||| || ||||||| ||||||    
T  44336973 tggacgatttatctgactcgtgcgtagaggcatgcgcactgaccaaacgttatttttcctggaaatcgaactcgatattccctagatac 44336885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 249 - 356
Target Start/End: Original strand, 5039422 - 5039529
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccgg 348  Q
    |||||||||| | | ||| ||||| ||  ||| |||||||||||||||||||||  ||| ||||||| |||| |||||||  ||| | |||||||| |||    
T  5039422 gcaccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcgg 5039521  T
Q  349 tattcccc 356  Q
    ||||||||    
T  5039522 tattcccc 5039529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 251 - 362
Target Start/End: Original strand, 28396166 - 28396277
Alignment:
Q  251 accggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggta 350  Q
    |||||||||| ||||| ||||| | ||||| |||||||||||||||||| || |||||||||     ||||||||||| |||||  ||| ||||||| ||    
T  28396166 accggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgcaccagctaagcgttgttccccctgagaattgaacccgata 28396265  T
Q  351 ttccccagatac 362  Q
    || ||| |||||    
T  28396266 tttcccggatac 28396277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 262 - 354
Target Start/End: Original strand, 4228771 - 4228860
Alignment:
Q  262 acccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    ||||||||| | ||| ||| ||||||||||||||||||| | |||| ||||||  ||| |||||||   ||||||||||||||| ||||||||    
T  4228771 acccatcaatggtgggcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgtt---cctggaaatcgaacctggtattcc 4228860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 361
Target Start/End: Original strand, 21190779 - 21190896
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||||| ||  | ||| ||| ||||| | ||| ||||||||| ||||||||||   ||||||||| ||  ||| | |||||||    
T  21190779 ctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaa 21190878  T
Q  344 cccggtattccccagata 361  Q
    ||||||||||||| ||||    
T  21190879 cccggtattccccggata 21190896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 290 - 355
Target Start/End: Original strand, 48224776 - 48224840
Alignment:
Q  290 ctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||| |||||| |||||||||||||||||||||||||| || ||||||| |||| || |||||||    
T  48224776 ctcatacgtagatacatgcgcactgatcaagcgttgttc-ccatggaaattgaactcgatattccc 48224840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 268 - 356
Target Start/End: Original strand, 4973133 - 4973221
Alignment:
Q  268 caaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    ||||| ||||||| ||||||||||| | ||||||| |||||||| || ||||| ||| ||| || | | ||||||||||| ||||||||    
T  4973133 caaagctggacgactaatccggctcgtacgtagaggcatgcgcattggtcaagtgttattccccgtaggaatcgaacccgatattcccc 4973221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 317 - 352
Target Start/End: Complemental strand, 45448007 - 45447972
Alignment:
Q  317 caagcgttgttctccctggaaatcgaacccggtatt 352  Q
    ||||||||||||||||||||||||||||| ||||||    
T  45448007 caagcgttgttctccctggaaatcgaacctggtatt 45447972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 326
Target Start/End: Original strand, 44961637 - 44961719
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgt 326  Q
    ||||||||||||||||| |||||||||||  |||  | ||||| | ||| | |||||||||||||| |||| |||||| ||||    
T  44961637 ctttcgcaccggtttccgacccatcaaaggcggataactaatctgactcgtacgtagagacatgcgtactggtcaagcattgt 44961719  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 249 - 302
Target Start/End: Complemental strand, 9685832 - 9685779
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagag 302  Q
    |||||||||||| | ||||||| | |||| || |||||||||||||||||||||    
T  9685832 gcaccggtttcctatccatcaatggtggatgactaatccggctcatgcgtagag 9685779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 304 - 357
Target Start/End: Original strand, 22268088 - 22268141
Alignment:
Q  304 catgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccca 357  Q
    |||||||||||  |||  ||||||| |||||| |||||||||||||||||||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattcccca 22268141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 333
Target Start/End: Complemental strand, 28744272 - 28744183
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccct 333  Q
    |||||||||| |||||| ||||| ||||| ||||||| ||||||||||| |  ||||||  ||||| ||||  ||||| |||||| ||||    
T  28744272 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtatgtagaggtatgcgtactggccaagcattgttccccct 28744183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 244 - 344
Target Start/End: Complemental strand, 32823353 - 32823253
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||||||| | |   ||| ||||||||||| ||||||||| ||| | ||| |  |||| ||||||| |||||| |||||||    
T  32823353 ctttcgcacccgtttccgacccatcaatggtctgcgactaatccggctcgtgcgtagaggcatacacaccggccaagtgttgttccccctgggaatcgaa 32823254  T
Q  344 c 344  Q
    |    
T  32823253 c 32823253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 71; Significance: 5e-32; HSPs: 77)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 5504139 - 5504021
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| |||||||||| ||||||||||| ||||||| ||||||||||||||||||||| |||| ||||| ||||||||||||| ||||||  |||||||    
T  5504139 ctttcgtaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgtgcactaatcaagcgttgttttccctgagaatcgaa 5504040  T
Q  344 cccggtattccccagatac 362  Q
    || | ||||||||||||||    
T  5504039 cctgatattccccagatac 5504021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 71; E-Value: 5e-32
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 41663856 - 41663974
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| |||||| |||||||||||||| |||||||||||| |||| ||||||| |||||| |||||||    
T  41663856 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 41663955  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  41663956 cccggtattccccggatac 41663974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 7e-31
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 9659179 - 9659290
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||||||||| ||||| ||||||| |||||||||||||||||| || ||||||||||  |||| |||||||| |||||| |||||||    
T  9659179 ctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttc-ccctgggaatcgaa 9659277  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  9659278 cccggtattcccc 9659290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 264 - 362
Target Start/End: Complemental strand, 10336604 - 10336506
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||| ||||| |||||||||||| ||||| || |||||    
T  10336604 ccatcaaaggtggacgattaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatac 10336506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 16263653 - 16263535
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | ||||||||  ||||||| || ||||||| |||||||||| |||||||||||  ||||||||||||  |||||||||||||    
T  16263653 ctttcgcaccggtttccgatccatcaaaagtggacgactattccggcttatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaa 16263554  T
Q  344 cccggtattccccagatac 362  Q
    || ||||||||||||||||    
T  16263553 cctggtattccccagatac 16263535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 66; E-Value: 4e-29
Query Start/End: Original strand, 241 - 362
Target Start/End: Original strand, 18649349 - 18649470
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||||||| |||  |||| ||| ||||||||| ||||| | ||||||| ||||||||||| ||||||||||||| ||||| |||||    
T  18649349 tttctttcgcaccggtttccaatccactaaaggtgggcgattaatctggctcgtacgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatc 18649448  T
Q  341 gaacccggtattccccagatac 362  Q
    ||||||| ||||| ||||||||    
T  18649449 gaacccgatattctccagatac 18649470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 26660245 - 26660134
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||||||| |||||| |||||||||  ||||||| || |||||||||||    
T  26660245 ctttcgcaccggtttccgacccaccaaaggtgg-cgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaa 26660147  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  26660146 cccggtattcccc 26660134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 354
Target Start/End: Complemental strand, 26325920 - 26325810
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||||||||||||||||||| |||||||||||| |||| ||||||| | |||| |||||||    
T  26325920 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaa 26325821  T
Q  344 cccggtattcc 354  Q
    |||| ||||||    
T  26325820 cccgatattcc 26325810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 10422896 - 10422784
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||  | ||||| ||||||| ||||||||||||||||||||| |||||||||||  |||| |||||||  ||| |||||||||    
T  10422896 ctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaa 10422797  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  10422796 cccggtattcccc 10422784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 10172971 - 10173089
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| ||||||||||||||||||||| |||| ||||||  |||||||||||||   ||| ||| |||    
T  10172971 ctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttctttatgggaattgaa 10173070  T
Q  344 cccggtattccccagatac 362  Q
     ||||||||||||||||||    
T  10173071 tccggtattccccagatac 10173089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 254 - 356
Target Start/End: Original strand, 14254278 - 14254380
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||| ||||||||||| ||||||| |||||||||||||||||| || |||||| ||||  |||||||||||| ||||| ||||||||| ||||||||    
T  14254278 ggtttccgacccatcaaaggtggacgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattc 14254377  T
Q  354 ccc 356  Q
    |||    
T  14254378 ccc 14254380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 49078222 - 49078104
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||| | ||| | || |||| ||||||||||||||||||||| |||||||||||  |||| ||||||  |||||| |||||||    
T  49078222 ctttcgcaccggtttccgacctaccaatggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 49078123  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  49078122 cccggtattccccggatac 49078104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 37339928 - 37339815
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgt-tctccctggaaatcga 342  Q
    ||||||||||||||||||||||| ||||| ||| ||| ||||||||||| ||||| ||| |||||||||||  ||||||||||  | |||||| ||||||    
T  37339928 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgtccccccctgggaatcga 37339829  T
Q  343 acccggtattcccc 356  Q
    ||||||||||||||    
T  37339828 acccggtattcccc 37339815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 5855630 - 5855518
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| |||||  |||| || |||| ||||||| ||||||||||||| |||||||||||  ||||||||||||  ||||| |||||||    
T  5855630 ctttcgcatcggtttccgacccactaaaggtgaacgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5855531  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  5855530 cccggtattcccc 5855518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 8764099 - 8763987
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||| | ||||||| ||||||||||| ||||||||| |||||||||||  |||| ||||||| |||||| || ||||    
T  8764099 ctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaa 8764000  T
Q  344 cccggtattcccc 356  Q
    |||| ||||||||    
T  8763999 cccgatattcccc 8763987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 274 - 362
Target Start/End: Complemental strand, 13262161 - 13262073
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||| ||||||| ||| |||||||||||||||| | ||| ||| ||||||||||||||||||||||||||||||||||||| ||||    
T  13262161 tggacgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaacccggtattccccatatac 13262073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 17642004 - 17642112
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||| ||||| ||||||| ||||||||||| ||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  17642004 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 17642103  T
Q  344 cccggtatt 352  Q
    ||| |||||    
T  17642104 cccagtatt 17642112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 18915975 - 18915863
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||||||||| ||| | ||  ||| ||||||||||| ||||||||| ||||| |||||  |||| ||||||| |||||| |||||||    
T  18915975 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 18915876  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  18915875 cccggtattcccc 18915863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 48798108 - 48798188
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||||||||||||||||| ||||||||||  ||||||||||||| |||||||||||||||||| |||||||| |||||    
T  48798108 taatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatac 48798188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 32142846 - 32142956
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||||||||| ||  ||| |||| ||||||||||||| || |||||||||||  |||| ||||||| ||||| ||||||||    
T  32142846 ctttcgcatcggtttccgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactggccaagtgttgttccccctgaaaatcgaa 32142945  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  32142946 cccggtattcc 32142956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 43959821 - 43959933
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| | |||  |||| ||| ||| ||||||||||| ||||||||| |||||||||||  |||||||||||| |||||| ||| |||    
T  43959821 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaa 43959920  T
Q  344 cccggtattcccc 356  Q
    |||| ||||||||    
T  43959921 cccgatattcccc 43959933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 244 - 355
Target Start/End: Original strand, 45361882 - 45361993
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| |||||  |||| || |||| |||||||||| |||||||| | |||||||||||  ||||||||||||  ||||  |||||||    
T  45361882 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaa 45361981  T
Q  344 cccggtattccc 355  Q
    ||||||||||||    
T  45361982 cccggtattccc 45361993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 242 - 356
Target Start/End: Complemental strand, 26258805 - 26258692
Alignment:
Q  242 ttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcg 341  Q
    |||||| ||||| ||||||||||||  |||| ||||||||||||||| |||||||||| || |||| ||||||| ||||||||| ||| ||||  |||||    
T  26258805 ttcttttgcaccagtttccaacccactaaaggtggacgattaatccgactcatgcgtaaaggcatgtgcactgaccaagcgttg-tcttcctgagaatcg 26258707  T
Q  342 aacccggtattcccc 356  Q
    || ||||||||||||    
T  26258706 aatccggtattcccc 26258692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 30927727 - 30927841
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||||||||  ||||| ||||  ||||||| ||||||||||||||||||||| ||||| || ||  |||||||||||| | ||||||||||||    
T  30927727 cttttgcaccggtttctgacccaccaaaagtggacgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaa 30927826  T
Q  344 cccggtattccccag 358  Q
    |||| |||| |||||    
T  30927827 cccgatatttcccag 30927841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 50503361 - 50503479
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||| ||||| ||  | ||| |||  |||||||||| ||||||||| ||||||||||| ||||| ||||||| |||||| |||||||    
T  50503361 ctttcgcatcggtttccgacccaccattggtgggcgacaaatccggctcgtgcgtagaggcatgcgcactggtcaagtgttgttccccctgggaatcgaa 50503460  T
Q  344 cccggtattccccagatac 362  Q
    |||| |||||||| |||||    
T  50503461 cccgatattccccggatac 50503479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 241 - 353
Target Start/End: Complemental strand, 2567387 - 2567275
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||||| |||||||||| ||||| ||||| ||||||  ||||| | ||| || |||||| |||||||||||  ||||||||||| |||| | |||||    
T  2567387 tttctttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatc 2567288  T
Q  341 gaacccggtattc 353  Q
    |||||||||||||    
T  2567287 gaacccggtattc 2567275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 17358509 - 17358589
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||| |||||||||||| || |||||||| || |||||||||||||||||||  ||||||||||||||||||||| ||||    
T  17358509 taatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatac 17358589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 264 - 352
Target Start/End: Original strand, 33498859 - 33498947
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    ||||||||| ||||||| ||||||||||||||||||||| |||||||||||  ||||||||| ||  ||||  ||||||||||||||||    
T  33498859 ccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgctcctcctgagaatcgaacccggtatt 33498947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 34697443 - 34697331
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||||||||||||||||  ||| ||| ||||||||||||||||||||| ||||| ||||   |||| ||||||| ||||   |||||||    
T  34697443 ctttcgcatcggtttccaacccatcaaaagtgggcgactaatccggctcatgcgtagaggcatgcacactagccaagtgttgttccccctaagaatcgaa 34697344  T
Q  344 cccggtattcccc 356  Q
    || ||||||||||    
T  34697343 cctggtattcccc 34697331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 11397889 - 11398006
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| ||||| ||||| ||||| ||||||| ||||||| ||||||||||||| ||| |||| ||  ||| |||||||| |||| | |||||||    
T  11397889 ctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttc-ccctcggaatcgaa 11397987  T
Q  344 cccggtattccccagatac 362  Q
    |||||||||| || |||||    
T  11397988 cccggtattctccggatac 11398006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 14357866 - 14357780
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    |||||||||||||||||||| ||||||||| | |  ||||||||||||| || ||||||||| ||||||||||| |||| |||||||    
T  14357866 tttctttcgcaccggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgtt 14357780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 15466073 - 15465955
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| | |||||||| ||||| ||||| ||  |||  |||| | ||| ||||||||| |||| ||||||| |||||||||||| ||||||||||||||    
T  15466073 ctttcgtatcggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaa 15465974  T
Q  344 cccggtattccccagatac 362  Q
    || ||||||||||| ||||    
T  15465973 cctggtattccccaaatac 15465955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 32150922 - 32151032
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||| | ||||||||||| ||  ||| |||| ||||||||||||| || |||||||||||| |||  ||||||| ||||||||||||||    
T  32150922 ctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaa 32151021  T
Q  344 cccggtattcc 354  Q
    || | ||||||    
T  32151022 cctgatattcc 32151032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 32979 - 32867
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| | |||||||| | ||||||||  | ||||| |||| |||||||||||||||| |||| ||||||| ||||||||||||  ||||| ||||| |    
T  32979 ctttcgtatcggtttccgatccatcaaaagtagacgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcgga 32880  T
Q  344 cccggtattcccc 356  Q
    |||| ||||||||    
T  32879 cccgatattcccc 32867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 12744561 - 12744641
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||| | | |||||| |||||||    
T  12744561 taattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatac 12744641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 12755551 - 12755631
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||| |||||||||||||||||||||||||||  ||||||||||||| ||||| |||||||| | | |||||| |||||||    
T  12755551 taattcggctcatgcgtagagacatgcgcactagtcaagcgttgttccccctgaaaatcgaatctgatattcctcagatac 12755631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 352
Target Start/End: Original strand, 31576544 - 31576655
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    ||||||| |||||||||||| || |||||||| ||||||| ||| ||||||||||||||||| ||  |||| ||  ||||| |||||  |||||  ||||    
T  31576544 tttcttttgcaccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatc 31576643  T
Q  341 gaacccggtatt 352  Q
    ||||||||||||    
T  31576644 gaacccggtatt 31576655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 274 - 360
Target Start/End: Complemental strand, 35908836 - 35908749
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatc-aagcgttgttctccctggaaatcgaacccggtattccccagat 360  Q
    ||||||| ||||||||||||||||||||| |||||||||||| | ||| ||||||| ||||  |||||||| ||||||||||| ||||    
T  35908836 tggacgactaatccggctcatgcgtagaggcatgcgcactgaccaaagtgttgttccccctaaaaatcgaatccggtattccctagat 35908749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 241 - 344
Target Start/End: Original strand, 50371831 - 50371934
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||||||||||| | ||| ||||| ||| ||| ||||||||||  ||||||||  |||||| ||||  ||||||||||||| |||| |||||    
T  50371831 tttctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatc 50371930  T
Q  341 gaac 344  Q
    ||||    
T  50371931 gaac 50371934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 2980931 - 2981049
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| ||||| |||||  |||  ||||||| ||||||| ||| ||||||||| ||||| |||||  |||| ||||||| | |||| |||||||    
T  2980931 ctttcgcaccgatttccgacccactaaacatggacgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaa 2981030  T
Q  344 cccggtattccccagatac 362  Q
    ||| ||||||||| |||||    
T  2981031 cccagtattccccggatac 2981049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 314
Target Start/End: Original strand, 4581682 - 4581752
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    ||||||||||||||||| ||||| ||||| ||||||| || |||||||| ||||||||| |||||||||||    
T  4581682 ctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactg 4581752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 33004015 - 33004133
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||||| ||  | |||  || ||||||||||| ||||||||| |||||||||||  ||||| |||||  ||||||||||||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaa 33004114  T
Q  344 cccggtattccccagatac 362  Q
     ||| |||||||| |||||    
T  33004115 tccgatattccccggatac 33004133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 244 - 358
Target Start/End: Complemental strand, 34719884 - 34719770
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||| ||||| ||  ||| ||||| | ||| ||||||||| ||||||||||| ||||||||| ||| |  ||| |||||||    
T  34719884 ctttcgcaccagtttccgacccaccaaaggtgagcgactaatctgactcgtgcgtagaggcatgcgcactggtcaagcgttattcccagtgggaatcgaa 34719785  T
Q  344 cccggtattccccag 358  Q
    ||| |||||||||||    
T  34719784 cccagtattccccag 34719770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 282 - 355
Target Start/End: Original strand, 28324618 - 28324691
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||||  ||| || ||||||||||| |||||||    
T  28324618 taatccggctcatgcgtagaggcatgcgcactgaccaagtgttgtttccccggggaatcgaacccgatattccc 28324691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 16956574 - 16956462
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||| ||||||| ||||| ||||| ||   || ||||||||||| ||||||||| ||||||||||| |||| |||||||  |||||  || ||||    
T  16956574 ctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaa 16956475  T
Q  344 cccggtattcccc 356  Q
    | |||||||||||    
T  16956474 cacggtattcccc 16956462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 18808373 - 18808289
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||||| |||||  |||||| | ||| ||||||||||||| | || || ||||||||||| |||||||||||||    
T  18808373 ctttcgcaccggtttccgacccaataaagttagtcgaataatccggctcatacataaaggcatgcgcactggtcaagcgttgttc 18808289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 40288477 - 40288589
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||| ||||||| ||||| ||| | ||  ||| ||||||||||| || |||||| |||||  ||||  ||| |||||||| ||||||||||||||    
T  40288477 cttttgcactggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaa 40288576  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  40288577 cccggtattcccc 40288589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 44969772 - 44969665
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||||||||| | ||| ||| | ||||||| ||||||||||||||||||| | ||||| |||||  ||||||||||||| ||||  |||||||    
T  44969772 ctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgttct-cctgagaatcgaa 44969674  T
Q  344 cccggtatt 352  Q
    || ||||||    
T  44969673 cctggtatt 44969665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 31152823 - 31152713
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||| | |||||| || ||||| ||||||| ||||  | ||| || |||||| || ||||||||| |||||||| ||| ||| ||||||||||    
T  31152823 ctttcgcaccg-tctccaactcaccaaaggtggacgactaatttgactcgtgtgtagaggcacgcgcactgaccaagcgttattcccccgggaaatcgaa 31152725  T
Q  344 cccggtattccc 355  Q
    ||||||||||||    
T  31152724 cccggtattccc 31152713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 254 - 353
Target Start/End: Original strand, 33418125 - 33418224
Alignment:
Q  254 ggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||| ||| | ||||| ||||||| ||||||||||| ||| ||||| |||||||||||  |||||||||| | |||| | ||||||| |||||||||    
T  33418125 ggtttccgaccgaccaaaggtggacgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattc 33418224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 353
Target Start/End: Original strand, 12036743 - 12036853
Alignment:
Q  244 ctttcgcaccggttt-ccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcga 342  Q
    ||||||||| ||||| || | ||| ||||| ||||||||||||| ||||| ||||||||| |||||||||||  ||||| |||||| |||| | |||| |    
T  12036743 ctttcgcactggttttccgatccaccaaaggtggacgattaatctggctcgtgcgtagaggcatgcgcactggccaagcattgttccccctaggaatcaa 12036842  T
Q  343 acccggtattc 353  Q
    |||| ||||||    
T  12036843 acccagtattc 12036853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 18708540 - 18708650
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| ||| |||||| ||||||||||||| ||  ||| ||||| |||||||| |||||| ||||||||||   ||||| ||| |  ||||||||||||||    
T  18708540 ctttagcatcggttttcaacccatcaaaggtgagcgactaatctggctcatgtgtagaggcatgcgcactagccaagcattgcttcccctggaaatcgaa 18708639  T
Q  344 cccggtattcc 354  Q
    ||| |||||||    
T  18708640 cccagtattcc 18708650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 241 - 327
Target Start/End: Complemental strand, 19195472 - 19195391
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    |||||||||||||||||||| || |||||||| ||||||||     |||||||||||||||| |||||||||||  ||| |||||||    
T  19195472 tttctttcgcaccggtttccgactcatcaaaggtggacgat-----cggctcatgcgtagaggcatgcgcactggccaaacgttgtt 19195391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 244 - 362
Target Start/End: Original strand, 46929738 - 46929855
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||| |||||| | | ||||||||  ||||||| |||||||||||||| || ||| |||||||| ||  |||||||||||||   |||||||||||    
T  46929738 ctttcgcatcggttttcgatccatcaaaagtggacgactaatccggctcatgtgtggaggcatgcgcattggccaagcgttgttct-tttggaaatcgaa 46929836  T
Q  344 cccggtattccccagatac 362  Q
    | || ||||| ||||||||    
T  46929837 ctcgatattctccagatac 46929855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 45726430 - 45726503
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    ||||||||||||| || ||| | ||| ||||| || |||| ||||||||||||||||||||||||| |||||||    
T  45726430 tttctttcgcaccagtctccgatccaccaaaggtgaacgactaatccggctcatgcgtagagacatacgcactg 45726503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 277 - 362
Target Start/End: Original strand, 47312932 - 47313016
Alignment:
Q  277 acgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||| ||||| ||||||||||||||| ||| |||||||  ||| |||||||| |||| | |||| |||||||||||||||||||||    
T  47312932 acgactaatctggctcatgcgtagaggcatacgcactggccaaacgttgttc-ccctaggaatcaaacccggtattccccagatac 47313016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 352
Target Start/End: Original strand, 9853277 - 9853385
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||| |||||| ||||  ||||| ||||| ||||||||||||| || || || |||||| ||||||||||| | || |||||||  |||| | |||||||    
T  9853277 cttttgcaccgatttctgacccaccaaaggtggacgattaatctggttcgtgtgtagaggcatgcgcactggtaaaacgttgtttcccctaggaatcgaa 9853376  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  9853377 cccggtatt 9853385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 17389879 - 17389795
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||||| ||||||||    ||||||| |||||| |||||||||| ||| ||||||||||| |||| | ||||||    
T  17389879 ctttcgcaccggtttccgacccatcagcaatggacgactaatccagctcatgcgtggaggcatgcgcactggtcaaacattgttc 17389795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 6563511 - 6563444
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggt 349  Q
    ||||| ||||| |||||||||||||| ||||||  |||||||||||| |||| | |||||||||||||    
T  6563511 taatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 6563444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 242 - 297
Target Start/End: Original strand, 8905161 - 8905216
Alignment:
Q  242 ttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcg 297  Q
    ||||||||||||||||||| ||| ||||||| ||| ||||||||| ||||||||||    
T  8905161 ttctttcgcaccggtttccgaccaatcaaaggtggtcgattaatctggctcatgcg 8905216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 244 - 347
Target Start/End: Original strand, 35211172 - 35211275
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||||||||| ||||| ||||| ||||||| |||| | |||||||||||||| |||||| | ||   |||| ||||||   ||||||||||||    
T  35211172 ctttcacaccggtttccgacccaccaaaggtggacgactaattcagctcatgcgtagaggcatgcgtattggctaagcattgttccttctggaaatcgaa 35211271  T
Q  344 cccg 347  Q
    ||||    
T  35211272 cccg 35211275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 362
Target Start/End: Original strand, 34334355 - 34334413
Alignment:
Q  304 catgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||||||||||  |||| ||||||| |||||| |||||||||||||||||||| |||||    
T  34334355 catgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatac 34334413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 249 - 347
Target Start/End: Original strand, 38859121 - 38859219
Alignment:
Q  249 gcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccg 347  Q
    |||||||||| | ||||||||||| ||| ||||||||| | ||| ||||||||| |||| ||| ||| ||| | |||||  |||||| |||||||||||    
T  38859121 gcaccggttttcgacccatcaaaggtgggcgattaatctgactcgtgcgtagaggcatgtgcattgaccaaacattgttacccctgggaatcgaacccg 38859219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 313
Target Start/End: Complemental strand, 6899666 - 6899597
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcact 313  Q
    ||||||||||||||||| | ||||||||| ||| ||| ||||||||||  |||||| || ||||||||||    
T  6899666 ctttcgcaccggtttccgatccatcaaaggtgggcgactaatccggcttgtgcgtaaaggcatgcgcact 6899597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 355
Target Start/End: Original strand, 17988690 - 17988770
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    ||||||| |||||||| ||||||||||||  ||||||||||  ||||| ||||| |||||| ||||| |||| |||||||||    
T  17988690 tggacgactaatccggttcatgcgtagaggtatgcgcactggccaagcattgtt-tccctgaaaatcaaacctggtattccc 17988770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 282 - 347
Target Start/End: Original strand, 21849243 - 21849307
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccg 347  Q
    ||||||||||| ||||||||| ||||||||||   |||||||||||| |||||| |||||||||||    
T  21849243 taatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttc-ccctgggaatcgaacccg 21849307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 264 - 313
Target Start/End: Original strand, 38791630 - 38791679
Alignment:
Q  264 ccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcact 313  Q
    ||||||||| ||||||| |||| |||||||||||||||| ||||||||||    
T  38791630 ccatcaaagatggacgactaattcggctcatgcgtagaggcatgcgcact 38791679  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 297
Target Start/End: Complemental strand, 51437565 - 51437512
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcg 297  Q
    ||||||||||||||||| ||||| ||||| |||| || ||||||||||||||||    
T  51437565 ctttcgcaccggtttccgacccaccaaaggtggatgactaatccggctcatgcg 51437512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 354
Target Start/End: Complemental strand, 13266016 - 13265936
Alignment:
Q  274 tggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    ||||||| ||| ||||||||||||||||| |||||||||||   |  ||||||| ||||| | ||||||||| ||||||||    
T  13266016 tggacgactaacccggctcatgcgtagaggcatgcgcactggctagacgttgttttccctaggaatcgaaccaggtattcc 13265936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 244 - 328
Target Start/End: Complemental strand, 50095012 - 50094928
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    |||| |||||||||||| |||||  || | ||||||| ||||||| ||||||||||||  |||||| |||| |||| ||||||||    
T  50095012 cttttgcaccggtttccgacccactaatggtggacgactaatccgactcatgcgtagaagcatgcgtactggtcaaacgttgttc 50094928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 244 - 355
Target Start/End: Original strand, 15238106 - 15238217
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| |||||||||||||||| ||||| ||  ||| ||||  |  || ||||||||| ||||| || ||  ||||||||| || |||||| |||||||    
T  15238106 ctttcgaaccggtttccaacccaccaaaggtgagcgactaatatgattcgtgcgtagaggcatgctcattggccaagcgttgctccccctgggaatcgaa 15238205  T
Q  344 cccggtattccc 355  Q
    |||| |||||||    
T  15238206 cccgatattccc 15238217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 294 - 353
Target Start/End: Complemental strand, 45536766 - 45536707
Alignment:
Q  294 tgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||||| |||| ||||||  |||||||||||| || | |||||||||||||||||||    
T  45536766 tgcgtagaggcatgtgcactggccaagcgttgttccccttagaaatcgaacccggtattc 45536707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 304 - 354
Target Start/End: Complemental strand, 51437517 - 51437467
Alignment:
Q  304 catgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcc 354  Q
    ||||||||||| ||||||||||||| || ||| ||||||||||| ||||||    
T  51437517 catgcgcactggtcaagcgttgttccccatgggaatcgaacccgatattcc 51437467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 244 - 301
Target Start/End: Original strand, 3850742 - 3850799
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtaga 301  Q
    ||||||||||||||||| |||||| |||| ||| ||| ||||||| ||| ||||||||    
T  3850742 ctttcgcaccggtttccgacccattaaaggtgggcgactaatccgcctcgtgcgtaga 3850799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 247 - 344
Target Start/End: Original strand, 17092480 - 17092577
Alignment:
Q  247 tcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||  | | | ||||| ||||||| ||||||||||| ||||||||| ||| | |||||  ||| |||||||  ||||| |||||||||    
T  17092480 tcgcaccggtttctgatctaccaaaggtggacgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaac 17092577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 358
Target Start/End: Original strand, 30044501 - 30044614
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||| | ||||| |   | ||||||| ||||||| ||| | |||| |  |||||| |||||||  ||||| |||| || |||||||||||    
T  30044501 tttcgcaccggttttcgacccacctttggtggacgactaatccgactcgtacgtaaaagcatgcgtactgatcgtgcgtttttcttccgggaaatcgaac 30044600  T
Q  345 ccggtattccccag 358  Q
    |||||||| |||||    
T  30044601 ccggtatttcccag 30044614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 298 - 362
Target Start/End: Complemental strand, 82377 - 82314
Alignment:
Q  298 tagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||||||||| ||||||||||||||||||| |||||  |||||||| | ||||||| ||| ||||    
T  82377 tagagacatgtgcactgatcaagcgttgtt-tccctaaaaatcgaatctggtattctccaaatac 82314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 67; Significance: 1e-29; HSPs: 3)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 42831 - 42945
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||| ||| |||||||||||||| |||||| |||||||||||| ||||| ||||||||||| | |||||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctccctaggaatcgaa 42930  T
Q  344 cccggtattccccag 358  Q
    |||| ||||||||||    
T  42931 cccgatattccccag 42945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 317 - 357
Target Start/End: Complemental strand, 9473 - 9433
Alignment:
Q  317 caagcgttgttctccctggaaatcgaacccggtattcccca 357  Q
    |||||||||||| |||||| |||||||||||||||||||||    
T  9473 caagcgttgttccccctgggaatcgaacccggtattcccca 9433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 245 - 301
Target Start/End: Complemental strand, 9551 - 9495
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtaga 301  Q
    |||||||||||||||  ||||| ||||| ||||||| ||||  ||||||||||||||    
T  9551 tttcgcaccggtttctgacccaccaaaggtggacgactaatttggctcatgcgtaga 9495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0291 (Bit Score: 65; Significance: 2e-28; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 6965 - 6853
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||  ||| ||||||||||||||||||||| |||||||||||  |||| ||||||| |||||| |||||||    
T  6965 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 6866  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  6865 cccggtattcccc 6853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 63; Significance: 3e-27; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 244 - 354
Target Start/End: Original strand, 8700 - 8810
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||| |||||| ||||| ||||| ||||||| |||||| |||||||||||||| || ||||||||  |||||||||||| |||||| |||||||    
T  8700 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccagctcatgcgtagaggcaagcgcactggccaagcgttgttccccctgggaatcgaa 8799  T
Q  344 cccggtattcc 354  Q
    |||||||||||    
T  8800 cccggtattcc 8810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0086 (Bit Score: 62; Significance: 1e-26; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 241 - 358
Target Start/End: Complemental strand, 26296 - 26179
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatc 340  Q
    |||||||||||| ||||||| || ||||||   ||||||| ||||||||||| ||||||||| ||||| |||||  |||||||||||| |||||||||||    
T  26296 tttctttcgcactggtttccgactcatcaattgtggacgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatc 26197  T
Q  341 gaacccggtattccccag 358  Q
    |||||| |||||||||||    
T  26196 gaacccagtattccccag 26179  T

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Target: scaffold0170 (Bit Score: 61; Significance: 4e-26; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 61; E-Value: 4e-26
Query Start/End: Original strand, 262 - 362
Target Start/End: Complemental strand, 9937 - 9837
Alignment:
Q  262 acccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagata 361  Q
    ||||| ||||| ||||||| ||||||||||| ||||||||| |||||||||||  |||||||||||| |||||||||||||| |||||||||| ||||||    
T  9937 acccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaatccggtattcctcagata 9838  T
Q  362 c 362  Q
    |    
T  9837 c 9837  T

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Target: scaffold0002 (Bit Score: 59; Significance: 7e-25; HSPs: 4)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 59; E-Value: 7e-25
Query Start/End: Original strand, 244 - 362
Target Start/End: Complemental strand, 319532 - 319414
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||||  |||| ||||| ||||||| |||||| |||||||| |||||  ||||||||||  |||||||||||| |||| |||||| ||    
T  319532 ctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaa 319433  T
Q  344 cccggtattccccagatac 362  Q
    ||||||||||||| |||||    
T  319432 cccggtattccccggatac 319414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #2
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 680 - 568
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||  ||| ||||| ||||||| ||||||| ||||| ||||||||||| ||||||| |||||  |||||||    
T  680 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatctggctcatacgtagaggcatgcacactgatcaagtgttgttccccctgcgaatcgaa 581  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  580 cccggtattcccc 568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 245 - 294
Target Start/End: Complemental strand, 410859 - 410810
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcat 294  Q
    |||| ||| ||||||||||||||||||| ||||||| |||||| ||||||    
T  410859 tttcacactggtttccaacccatcaaaggtggacgactaatccagctcat 410810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 362
Target Start/End: Original strand, 412091 - 412143
Alignment:
Q  310 cactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    |||||| |||||||||||| |||||  |||||||| ||||||||||| |||||    
T  412091 cactgaccaagcgttgttccccctgtgaatcgaactcggtattccccggatac 412143  T

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Target: scaffold0209 (Bit Score: 58; Significance: 3e-24; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 244 - 352
Target Start/End: Complemental strand, 12683 - 12577
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||||||| || ||||||||| ||| ||| ||||||| ||||||||||||| ||||||||||| |||||||||||  ||||| | |||||||    
T  12683 ctttcgcaccggtttctaatccatcaaaggtgggcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgt--tccctaggaatcgaa 12586  T
Q  344 cccggtatt 352  Q
    |||||||||    
T  12585 cccggtatt 12577  T

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Target: scaffold0316 (Bit Score: 55; Significance: 2e-22; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 244 - 358
Target Start/End: Original strand, 1613 - 1727
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||| | ||||| ||||| ||| ||| ||||  ||||||||||||||| |||||||||||   || |||||||| ||||||||||||||    
T  1613 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaa 1712  T
Q  344 cccggtattccccag 358  Q
    || ||||||||||||    
T  1713 cctggtattccccag 1727  T

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Target: scaffold0011 (Bit Score: 54; Significance: 6e-22; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 244 - 353
Target Start/End: Complemental strand, 224427 - 224318
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||| ||||| ||||| ||||||| ||||||||||| |||||||||  ||| ||||||||||| |||| |||||||||  | |||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgtagaggtatgtgcactgatcaaacgttattctccctgagattcgaa 224328  T
Q  344 cccggtattc 353  Q
    |||| |||||    
T  224327 cccgatattc 224318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011; HSP #2
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 245 - 362
Target Start/End: Complemental strand, 186626 - 186510
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||| ||||||||||| |||||  |||| || |||| ||||||||||| ||||||||| |||| ||||||| ||| | || |||||||| ||||||||||    
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattattctccct-gaaatcgaac 186528  T
Q  345 ccggtattccccagatac 362  Q
    ||| ||||| ||| ||||    
T  186527 ccgatattctccaaatac 186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0376 (Bit Score: 49; Significance: 6e-19; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 244 - 356
Target Start/End: Complemental strand, 12780 - 12668
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||||||||||||||  ||||||||||| ||| ||| |||||||| || ||||||||| ||||| |||||  ||||||||||||  |||   |||||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctctgaatcgaa 12681  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  12680 cccggtattcccc 12668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 48; Significance: 2e-18; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 244 - 343
Target Start/End: Original strand, 155710 - 155809
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||||||||| |||| ||||| ||||| ||| ||| ||||||||||| ||||||||| ||||||||||   |||||||||||| |||||| |||||||    
T  155710 ctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttccccctgggaatcgaa 155809  T

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Target: scaffold0010; HSP #2
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 245 - 356
Target Start/End: Original strand, 25784 - 25895
Alignment:
Q  245 tttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaac 344  Q
    |||||||||||||||  |||||  |||| |||  || ||||| || ||| |||||||| |||||||||||  ||||||||||||||||| | ||||||||    
T  25784 tttcgcaccggtttctgacccagtaaaggtgggtgactaatctggttcacgcgtagagtcatgcgcactggccaagcgttgttctccctaggaatcgaac 25883  T
Q  345 ccggtattcccc 356  Q
    |  |||||||||    
T  25884 cttgtattcccc 25895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 48; Significance: 2e-18; HSPs: 4)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 286 - 353
Target Start/End: Original strand, 271115 - 271182
Alignment:
Q  286 ccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattc 353  Q
    ||||||| |||||||||||||||||||||| |||||||||||| |||||| ||||||||||| |||||    
T  271115 ccggctcgtgcgtagagacatgcgcactgaccaagcgttgttccccctgggaatcgaacccgatattc 271182  T

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Target: scaffold0005; HSP #2
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 282 - 362
Target Start/End: Original strand, 249342 - 249422
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccccagatac 362  Q
    ||||||| ||| |||||||||  ||| |||||| ||||||||| |||||||||  ||||||||| ||||||||||| ||||    
T  249342 taatccgactcgtgcgtagaggtatgtgcactggtcaagcgttattctccctgagaatcgaacctggtattccccaaatac 249422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 241 - 314
Target Start/End: Original strand, 250021 - 250094
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    |||||||||||||| ||||| ||||| |||||  |  ||| ||||||||||| ||||||||| |||||||||||    
T  250021 tttctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactg 250094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 244 - 314
Target Start/End: Complemental strand, 219479 - 219409
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    |||| |||||||||| | | ||||||||| ||||||| |||||| | || ||||||||| |||||||||||    
T  219479 cttttgcaccggttttcgatccatcaaaggtggacgactaatccagttcgtgcgtagaggcatgcgcactg 219409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 46; Significance: 4e-17; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 282 - 355
Target Start/End: Complemental strand, 72704 - 72631
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattccc 355  Q
    |||||||||| |||| | ||| ||||||||||| ||||||||||||| || |||||||||||||||||||||||    
T  72704 taatccggcttatgctttgaggcatgcgcactggtcaagcgttgttccccttggaaatcgaacccggtattccc 72631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0384 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 253 - 356
Target Start/End: Complemental strand, 6073 - 5971
Alignment:
Q  253 cggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtatt 352  Q
    |||||||| ||||| ||| | ||||||| |||| || ||||||||||||| |||| ||||||  ||||||||| || ||||||||||||||||| |||||    
T  6073 cggtttccgacccaccaatggtggacgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttg-tccccctggaaatcgaacccagtatt 5975  T
Q  353 cccc 356  Q
    ||||    
T  5974 cccc 5971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0223 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0223
Description:

Target: scaffold0223; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 327
Target Start/End: Complemental strand, 16989 - 16906
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgtt 327  Q
    |||||||| |||||||||||||| ||||| ||  ||| ||||| ||||| ||||||||||||| |||||||| |||||||||||    
T  16989 ctttcgcatcggtttccaacccaccaaaggtgagcgactaatctggctcgtgcgtagagacatacgcactgaccaagcgttgtt 16906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0029 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 244 - 355
Target Start/End: Complemental strand, 41154 - 41043
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| |||||||||| || || ||||| ||| ||| ||||||||||| ||||||||| ||||| |||||| |||| ||||||| || ||  |||||||    
T  41154 ctttcgaaccggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaa 41055  T
Q  344 cccggtattccc 355  Q
    |||| |||||||    
T  41054 cccgatattccc 41043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 247 - 352
Target Start/End: Complemental strand, 68621 - 68519
Alignment:
Q  247 tcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaaccc 346  Q
    |||||||||||| | ||||| ||||| ||| ||| ||||||||||| ||||||||| |||||||||    |||||||||||| |||||| ||||||||||    
T  68621 tcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcac---ccaagcgttgttccccctgggaatcgaaccc 68525  T
Q  347 ggtatt 352  Q
    | ||||    
T  68524 gatatt 68519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 1)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 241 - 314
Target Start/End: Complemental strand, 25198 - 25125
Alignment:
Q  241 tttctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactg 314  Q
    |||||||||||||||||||| | ||| ||||| ||||||||||||| |  ||||||||||| ||||||||||||    
T  25198 tttctttcgcaccggtttccgatccaccaaaggtggacgattaatctgattcatgcgtagaaacatgcgcactg 25125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004 (Bit Score: 42; Significance: 0.000000000000009; HSPs: 2)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 244 - 363
Target Start/End: Original strand, 94979 - 95097
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaa-gttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcga 342  Q
    |||| |||||| ||||| ||||| |||| | ||| ||| |||||||||||||||||| || ||||||||||| |||| ||||||  | ||| ||||||||    
T  94979 cttttgcaccgatttccgacccaccaaatggtgggcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgt--ttcctagaaatcga 95076  T
Q  343 acccggtattccccagatact 363  Q
    ||| |||||||||| ||||||    
T  95077 acctggtattccccggatact 95097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0004; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 356
Target Start/End: Original strand, 7834 - 7946
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    |||||| |||||||||| | ||| ||||| ||| ||| |||||| ||| |||||||||| |||||||||||  |||| ||| ||| || ||| |||| ||    
T  7834 ctttcgtaccggtttccgatccaccaaaggtgggcgactaatccagctaatgcgtagaggcatgcgcactggccaagtgtttttccccttgggaatcaaa 7933  T
Q  344 cccggtattcccc 356  Q
    |||||||||||||    
T  7934 cccggtattcccc 7946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 244 - 328
Target Start/End: Original strand, 65151 - 65235
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttc 328  Q
    ||||||||||||||||| | | ||||||  ||  ||| |||||| ||||||||||||||||||||||||||  ||||||||||||    
T  65151 ctttcgcaccggtttccgatctatcaaaagtgagcgactaatccagctcatgcgtagagacatgcgcactggccaagcgttgttc 65235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0341 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0341
Description:

Target: scaffold0341; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 282 - 349
Target Start/End: Complemental strand, 18704 - 18637
Alignment:
Q  282 taatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggt 349  Q
    ||||| ||||| |||||||||||||| ||||||  |||||||||||| |||| | |||||||||||||    
T  18704 taatctggctcgtgcgtagagacatgtgcactggccaagcgttgttccccctaggaatcgaacccggt 18637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 34; Significance: 0.0000000005; HSPs: 1)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 244 - 350
Target Start/End: Complemental strand, 51837 - 51735
Alignment:
Q  244 ctttcgcaccggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaa 343  Q
    ||||| ||||||||||  | ||||||||| ||| ||| | ||||||||| |||    ||||||||||||||  |||||||||||| | |||| |||||||    
T  51837 ctttcacaccggtttcagatccatcaaaggtgggcgactgatccggctcgtgc----agacatgcgcactggccaagcgttgttccctctgggaatcgaa 51742  T
Q  344 cccggta 350  Q
    |||||||    
T  51741 cccggta 51735  T

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Target: scaffold0079 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 297 - 356
Target Start/End: Complemental strand, 8231 - 8173
Alignment:
Q  297 gtagagacatgcgcactgatcaagcgttgttctccctggaaatcgaacccggtattcccc 356  Q
    |||||| |||||||||||  |||||||||||| || ||| ||||||||||||||||||||    
T  8231 gtagaggcatgcgcactggccaagcgttgttc-ccttgggaatcgaacccggtattcccc 8173  T

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Target: scaffold0116 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 253 - 321
Target Start/End: Complemental strand, 17491 - 17423
Alignment:
Q  253 cggtttccaacccatcaaagttggacgattaatccggctcatgcgtagagacatgcgcactgatcaagc 321  Q
    |||||||| ||||||||| | ||| ||| ||||||||||| || |||||  ||||||||||| ||||||    
T  17491 cggtttccgacccatcaatggtgggcgactaatccggctcgtgtgtagaagcatgcgcactggtcaagc 17423  T

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