View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20830_high_2 (Length: 310)
Name: NF20830_high_2
Description: NF20830
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20830_high_2 |
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| [»] chr7 (1 HSPs) |
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Alignment Details
Target: chr7 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 12 - 310
Target Start/End: Original strand, 47366793 - 47367091
Alignment:
| Q |
12 |
cacagagcatactaagagtaaagaacttgaagatttagactcagtttttggttcacactgtagagaaatggaggattgtggaagaagacagctaaaattt |
111 |
Q |
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| T |
47366793 |
cacacagcattctaagagtaaagaacttgaagatttagactcagttttcggttcacgctgtagagaagtggaggattgtggaagaagacagctaaaattt |
47366892 |
T |
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| Q |
112 |
agacaaattcagagacaaaatgaagttgaaagattcgactctccattactatcttcaagaaaatatttacaccataggagcaaaaatttagagggagaag |
211 |
Q |
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| T |
47366893 |
agacaaattcagagacaaaatgaagttgaaagattcgactctccattactatcttcaagaaaatatttacaccataggagcaaaaatttagagggagaag |
47366992 |
T |
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| Q |
212 |
accattcctttcaaagctctcatagaattccaacatacatggttgcaacaaaatcaacacaagcaaaagtaagatcaacaagcacaccaaaaacaagaa |
310 |
Q |
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|||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47366993 |
accattcctttcaaagatctcacacaattccaacatacatggttgcaacaaaatcaacacaagcaaaagtaagatcaacaagcacaccaaaaacaagaa |
47367091 |
T |
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