View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20838_high_6 (Length: 320)
Name: NF20838_high_6
Description: NF20838
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20838_high_6 |
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Alignment Details
Target: chr1 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 49 - 265
Target Start/End: Original strand, 6871317 - 6871533
Alignment:
| Q |
49 |
taaaataaatttggcatgccgttaattaaatgtgcagcagtgaaaaccacatcaccccataattaattgttaggctttgattttgagaaactcagaattt |
148 |
Q |
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| T |
6871317 |
taaaataaatttggcatgccgttaattaaatgtgcagtagtgaaaaccacatcaccccataattaattgttaggctttgattttgagaaactcagaattt |
6871416 |
T |
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| Q |
149 |
tattttaaagatatatgtattacaattgaaaatccatttaattttggttttgtgaataatgaaaaaacttcgtaaattttatagtggctgatgttagttt |
248 |
Q |
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| T |
6871417 |
tattttaaagatatatgtattacaattgaaaattcatttaattttggttttgtgaataatgaaaaaacttcgtaaattttatagtggctgatgttagttt |
6871516 |
T |
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| Q |
249 |
tccctttttacacaggt |
265 |
Q |
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| T |
6871517 |
tccctttttacacaggt |
6871533 |
T |
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