View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2083_high_3 (Length: 276)
Name: NF2083_high_3
Description: NF2083
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2083_high_3 |
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Alignment Details
Target: chr7 (Bit Score: 213; Significance: 1e-117; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 213; E-Value: 1e-117
Query Start/End: Original strand, 53 - 269
Target Start/End: Complemental strand, 44227977 - 44227761
Alignment:
| Q |
53 |
agcaccaccctcacttttgttattatttttatcaccattattaccttctttgtgatctgaatcttcttcaccatcatcacctgcatcatctatgcaacct |
152 |
Q |
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| T |
44227977 |
agcaccaccctcacttttgttattatttttatcaccattattaccttctttgtgatctgaatcttcttcaccatcatcacctgcatcatctatgcaacct |
44227878 |
T |
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| Q |
153 |
tcatgactactttcaccaatttgttcagtactattcttctgatcttccttgatctccttattaataatattttcagtttcaccctttgattttgaagatt |
252 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
44227877 |
tcatgactactttcaccaatatgttcagtactattcttctgatcttccttgatctccttattaataatattttcagtttcaccctttgattttgaagatt |
44227778 |
T |
|
| Q |
253 |
ttttatctttcttctca |
269 |
Q |
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||||||||||||||||| |
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| T |
44227777 |
ttttatctttcttctca |
44227761 |
T |
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