View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20841_high_9 (Length: 305)

Name: NF20841_high_9
Description: NF20841
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20841_high_9
NF20841_high_9
[»] chr8 (4 HSPs)
chr8 (9-285)||(44587478-44587754)
chr8 (67-230)||(25938921-25939084)
chr8 (84-139)||(40796448-40796503)
chr8 (31-138)||(30273802-30273913)
[»] chr3 (5 HSPs)
chr3 (9-264)||(22522562-22522817)
chr3 (25-285)||(54332481-54332740)
chr3 (16-285)||(1538936-1539204)
chr3 (21-250)||(6032806-6033040)
chr3 (25-270)||(19792126-19792373)
[»] chr6 (6 HSPs)
chr6 (9-285)||(1512116-1512391)
chr6 (30-137)||(5477448-5477555)
chr6 (177-220)||(5477365-5477408)
chr6 (180-237)||(12200407-12200464)
chr6 (31-104)||(12200489-12200562)
chr6 (175-211)||(7413996-7414032)
[»] scaffold0169 (1 HSPs)
scaffold0169 (9-285)||(22704-22979)
[»] chr7 (3 HSPs)
chr7 (154-287)||(2274798-2274929)
chr7 (9-102)||(2276018-2276113)
chr7 (30-137)||(27804813-27804920)
[»] chr2 (2 HSPs)
chr2 (178-265)||(32835920-32836007)
chr2 (30-137)||(14150435-14150542)
[»] chr1 (4 HSPs)
chr1 (45-137)||(3214922-3215014)
chr1 (174-253)||(3158412-3158491)
chr1 (50-140)||(12928514-12928604)
chr1 (176-245)||(46149310-46149379)
[»] chr5 (2 HSPs)
chr5 (174-237)||(14489337-14489400)
chr5 (31-104)||(14489470-14489543)
[»] chr4 (1 HSPs)
chr4 (68-137)||(11116054-11116123)


Alignment Details
Target: chr8 (Bit Score: 249; Significance: 1e-138; HSPs: 4)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 9 - 285
Target Start/End: Original strand, 44587478 - 44587754
Alignment:
Q  9 agcatagggtctttaccatgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaat 108  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  44587478 agcattgggtctttaccatgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaat 44587577  T
Q  109 aagggtaggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaattccattgattattttgaaaactctaagatggagtttagtcgaa 208  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |    
T  44587578 aagggcaggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaattccattgattattttgaaaactctaaggtggagtttagtcgga 44587677  T
Q  209 gacaatcgaatgtggttgctcatgctcttactcgagaagccacttccctagctagtcaccatgttttttgatgatgt 285  Q
    ||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||| |||||||    
T  44587678 gacaatcgaatgtggttgctcatgctcttgctcaagaagccacttccctagctagtcaccatgtttttttatgatgt 44587754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 67 - 230
Target Start/End: Original strand, 25938921 - 25939084
Alignment:
Q  67 gattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaa-t 165  Q
    ||||||||  |||| |||||||||||||| |||||||| ||||  || |  ||||||||| |||||||||||||  || |||| || |||| |||||| |    
T  25938921 gattttgaattggatgccaagaaagttgtagattattttaatagaggaaacaatgatataaccgagtttggagcaatagtggaggagtgta-gaagaagt 25939019  T
Q  166 tccattgattattttgaaaactctaagatggagtttagtcgaagacaatcgaatgtggttgctca 230  Q
    |  | |  ||| ||||||||||||||| | ||||||||||| |||||| |||||| ||| |||||    
T  25939020 tgtaatctttactttgaaaactctaaggtagagtttagtcggagacaagcgaatgaggtcgctca 25939084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 84 - 139
Target Start/End: Original strand, 40796448 - 40796503
Alignment:
Q  84 caagaaagttgtggattatttcaataagggtaggaatgatatatccgagtttggag 139  Q
    ||||||||||||||||||||||||||  || || ||||| || |||||||||||||    
T  40796448 caagaaagttgtggattatttcaatagaggaagaaatgacatttccgagtttggag 40796503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 31 - 138
Target Start/End: Complemental strand, 30273913 - 30273802
Alignment:
Q  31 attcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgc----caagaaagttgtggattatttcaataagggtaggaatgatata 126  Q
    ||||| |||||||  ||| ||||| ||| ||| ||||||||||||||||| ||     ||||||||||| ||||| || |||||||| || |||||| |     
T  30273913 attcattgggtgcatgaactacaatttttaaatgtagattttgagatggatgcaaagaaagaaagttgtagattactttaataagggcagcaatgatgtt 30273814  T
Q  127 tccgagtttgga 138  Q
    ||||||||||||    
T  30273813 tccgagtttgga 30273802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 168; Significance: 5e-90; HSPs: 5)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 168; E-Value: 5e-90
Query Start/End: Original strand, 9 - 264
Target Start/End: Complemental strand, 22522817 - 22522562
Alignment:
Q  9 agcatagggtctttaccatgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaat 108  Q
    ||||| |||||||||| ||| ||||||||||||||| |||||||||||||| ||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  22522817 agcattgggtctttacaatgctattcaatgggtgcgggaattacaactttcgaacatagattttgagttggacgccaagaaagttgtgtattatttcaat 22522718  T
Q  109 aagggtaggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaattccattgattattttgaaaactctaagatggagtttagtcgaa 208  Q
    ||||| ||||||||||||||||| ||||||||| ||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||||||| |    
T  22522717 aagggaaggaatgatatatccgaatttggagccataatggatgaatgtaggaagaattgcaatgatttttttgaaaactctaaggtggagtttagtcgga 22522618  T
Q  209 gacaatcgaatgtggttgctcatgctcttactcgagaagccacttccctagctagt 264  Q
    ||||| |||||||||| |||||| ||||| |||||||||||||||| |||||||||    
T  22522617 gacaagcgaatgtggtcgctcatactcttgctcgagaagccacttctctagctagt 22522562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 151; E-Value: 7e-80
Query Start/End: Original strand, 25 - 285
Target Start/End: Complemental strand, 54332740 - 54332481
Alignment:
Q  25 catgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgata 124  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| | ||| ||||||||||||||||||||||||||||||| |  |||||||    
T  54332740 catgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagtttgacaccaagaaagttgtggattatttcaataagggcaataatgata 54332641  T
Q  125 tatccgagtttggagccgtaatggacgaatgtaggaagaattccattga-ttattttgaaaactctaagatggagtttagtcgaagacaatcgaatgtgg 223  Q
    |||| |||||||||||| |||||||  ||||||||||||||| || ||| || |||| ||||||||||| ||||||||||||| |||||| |||||||||    
T  54332640 tatcagagtttggagccataatggataaatgtaggaagaattgcaatgattttttttcaaaactctaaggtggagtttagtcggagacaaacgaatgtgg 54332541  T
Q  224 ttgctcatgctcttactcgagaagccacttccctagctagtcaccatgttttttgatgatgt 285  Q
    | |||||| ||||| ||||||| |||||||| |||||||||| |||  ||||||||||||||    
T  54332540 tcgctcatactcttgctcgagaggccacttctctagctagtcccca--ttttttgatgatgt 54332481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 16 - 285
Target Start/End: Complemental strand, 1539204 - 1538936
Alignment:
Q  16 ggtctttaccatgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggta 115  Q
    ||||||||||||| |||||||| ||||||||||||||||||||| || |||||||||||| |||| ||||||||||||||||||||||||||||||||      
T  1539204 ggtctttaccatgctattcaataggtgcgagaattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaataagggcg 1539105  T
Q  116 ggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaattccattgattattttgaaaactctaagatggagtttagtcgaagacaatc 215  Q
    ||||||||||||||||||||||||   ||||||| |||||||||||||||| || ||||| |||||||||||||||| ||||||||||||| |||||| |    
T  1539104 ggaatgatatatccgagtttggagatataatggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtggagtttagtcggagacaagc 1539005  T
Q  216 gaatgtggttgctcatgctcttactcgagaagccacttccctagctagtcaccatgttttttgatgatgt 285  Q
    |||| |||| |||||| ||||| ||| ||| |||| ||||||| |||||  ||||| |||||||||||||    
T  1539004 gaatatggtcgctcatactcttgctccagaggccatttccctaactagttcccatg-tttttgatgatgt 1538936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 21 - 250
Target Start/End: Complemental strand, 6033040 - 6032806
Alignment:
Q  21 ttaccatgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaag-----aaagttgtggattatttcaataagggta 115  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||||||||| ||| ||   | |||      |  |||||||| ||||||||| |||| |    
T  6033040 ttaccatgctattcaatgggtgcgagaattacaattttcgaacgtagatttcgagttgttggacaactttcaactgttgtggaatatttcaatgagggaa 6032941  T
Q  116 ggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaattccattgattattttgaaaactctaagatggagtttagtcgaagacaatc 215  Q
    |||||||||||||||||||||||||| ||||||| |||||||||||||||| || ||||| | || ||||||||||| ||| ||||||||| |||||| |    
T  6032940 ggaatgatatatccgagtttggagccataatggatgaatgtaggaagaattgcaatgattttcttaaaaactctaaggtggtgtttagtcggagacaagc 6032841  T
Q  216 gaatgtggttgctcatgctcttactcgagaagcca 250  Q
    ||||||||| |||||| ||||| ||||||| ||||    
T  6032840 gaatgtggtcgctcatactcttgctcgagaggcca 6032806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 25 - 270
Target Start/End: Original strand, 19792126 - 19792373
Alignment:
Q  25 catgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgata 124  Q
    |||| ||| ||||||||||  ||| |||||||| | || || ||||| ||| |||| ||||||||||||||||||||||| ||||  || || ||||| |    
T  19792126 catgctatacaatgggtgcaggaactacaacttcctaatgttgatttcgagttggatgccaagaaagttgtggattattttaatagaggaagaaatgaca 19792225  T
Q  125 tatccgagtttggagccgtaatggacgaatgta--ggaagaattccattgattattttgaaaactctaagatggagtttagtcgaagacaatcgaatgtg 222  Q
    | ||||||||||||||  |  | || |||||||   |||||  |    ||  |||||||||||||||||| ||||||||| ||| |||||| | ||||||    
T  19792226 tttccgagtttggagcaattgttgatgaatgtaagagaagatgtagtgtgtgtattttgaaaactctaaggtggagtttaatcggagacaagcaaatgtg 19792325  T
Q  223 gttgctcatgctcttactcgagaagccacttccctagctagtcaccat 270  Q
    ||||||||| | ||| || |||| |||||||   ||||||||| ||||    
T  19792326 gttgctcatacacttgctagagaggccactttattagctagtccccat 19792373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 3e-88; HSPs: 6)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 9 - 285
Target Start/End: Original strand, 1512116 - 1512391
Alignment:
Q  9 agcatagggtctttaccatgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaat 108  Q
    ||||| |||||||||||||| |||||||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||    
T  1512116 agcattgggtctttaccatgctattcaatgggtgcgagaattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaat 1512215  T
Q  109 aagggtaggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaattccattgattattttgaaaactctaagatggagtttagtcgaa 208  Q
    |||||  |||||||||||||||||||||||||  ||||||| |||||||||||||||| || ||||| ||||||||| |||||| ||||||||||||| |    
T  1512216 aagggcgggaatgatatatccgagtttggagctataatggatgaatgtaggaagaattgcaatgattgttttgaaaattctaaggtggagtttagtcgga 1512315  T
Q  209 gacaatcgaatgtggttgctcatgctcttactcgagaagccacttccctagctagtcaccatgttttttgatgatgt 285  Q
    ||||| |||||||||| |||||| ||||| ||||||| | || |||||||||||||| ||||  |||||||||||||    
T  1512316 gacaagcgaatgtggtcgctcatactcttgctcgagaggtcatttccctagctagtccccat-atttttgatgatgt 1512391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 5477555 - 5477448
Alignment:
Q  30 tattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgatatatcc 129  Q
    |||||||||||| | |||| ||||| ||||||| ||||||||||||||| | ||  |||||||||| || | |||||| || ||||| |||||| | ||     
T  5477555 tattcaatgggtacaagaactacaattttcaaatgtagattttgagatgaatgcagagaaagttgtagactttttcaacaaaggtagcaatgatgtgtct 5477456  T
Q  130 gagtttgg 137  Q
    ||||||||    
T  5477455 gagtttgg 5477448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 177 - 220
Target Start/End: Complemental strand, 5477408 - 5477365
Alignment:
Q  177 ttttgaaaactctaagatggagtttagtcgaagacaatcgaatg 220  Q
    |||||||||||||||| ||||||||||||| |||||| ||||||    
T  5477408 ttttgaaaactctaaggtggagtttagtcggagacaagcgaatg 5477365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 237
Target Start/End: Complemental strand, 12200464 - 12200407
Alignment:
Q  180 tgaaaactctaagatggagtttagtcgaagacaatcgaatgtggttgctcatgctctt 237  Q
    |||||||| |||||||||||||||| | |||||| |||||| ||| |||||| |||||    
T  12200464 tgaaaactttaagatggagtttagttggagacaagcgaatgaggtcgctcatactctt 12200407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 12200562 - 12200489
Alignment:
Q  31 attcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattattt 104  Q
    ||||||||||| |  ||| |||||||| |||| ||||||||||||||||| || |||  |||||| ||||||||    
T  12200562 attcaatgggtacacgaactacaacttacaaatgtagattttgagatggatgcgaagttagttgtagattattt 12200489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 175 - 211
Target Start/End: Complemental strand, 7414032 - 7413996
Alignment:
Q  175 tattttgaaaactctaagatggagtttagtcgaagac 211  Q
    ||||||||||||||||||||| |||||||||| ||||    
T  7414032 tattttgaaaactctaagatgaagtttagtcggagac 7413996  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0169 (Bit Score: 161; Significance: 7e-86; HSPs: 1)
Name: scaffold0169
Description:

Target: scaffold0169; HSP #1
Raw Score: 161; E-Value: 7e-86
Query Start/End: Original strand, 9 - 285
Target Start/End: Complemental strand, 22979 - 22704
Alignment:
Q  9 agcatagggtctttaccatgatattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaat 108  Q
    ||||| |||||||||||||| ||| |||||||||||||||||||||||||| || |||||||||||| |||| |||||||||||||||||||||||||||    
T  22979 agcattgggtctttaccatgctatgcaatgggtgcgagaattacaactttcgaatgtagattttgagttggatgccaagaaagttgtggattatttcaat 22880  T
Q  109 aagggtaggaatgatatatccgagtttggagccgtaatggacgaatgtaggaagaattccattgattattttgaaaactctaagatggagtttagtcgaa 208  Q
    |||||  |||||||||||||||||||||||||  ||||||| |||||||||||||||| || ||||| |||||||||||||||| || |||||||||| |    
T  22879 aagggcgggaatgatatatccgagtttggagctataatggatgaatgtaggaagaattgcaatgattgttttgaaaactctaaggtgaagtttagtcgga 22780  T
Q  209 gacaatcgaatgtggttgctcatgctcttactcgagaagccacttccctagctagtcaccatgttttttgatgatgt 285  Q
    ||||| |||||||||| |||||| ||||| |||||||  ||| |||||||||||||| ||||  |||||||||||||    
T  22779 gacaagcgaatgtggtcgctcatactcttgctcgagagaccatttccctagctagtccccat-atttttgatgatgt 22704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 3)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 154 - 287
Target Start/End: Complemental strand, 2274929 - 2274798
Alignment:
Q  154 tgtaggaagaattccattgattattttgaaaactctaagatggagtttagtcgaagacaatcgaatgtggttgctcatgctcttactcgagaagccactt 253  Q
    ||||||||||||| || ||||||||||||||||| |||| || |||||||||| |||||| |||||||||| ||||||  |||| |||||||  |||| |    
T  2274929 tgtaggaagaattgcaatgattattttgaaaactttaaggtgaagtttagtcggagacaagcgaatgtggtcgctcatattcttgctcgagagcccac-t 2274831  T
Q  254 ccctagctagtcaccatgttttttgatgatgtcc 287  Q
    ||||| | |||| | ||| |||||||||||||||    
T  2274830 ccctaaccagtccctatg-tttttgatgatgtcc 2274798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 9 - 102
Target Start/End: Complemental strand, 2276113 - 2276018
Alignment:
Q  9 agcatagggtctttaccatgatattcaatgggtgcgagaattacaact--ttcaaacgtagattttgagatggacgccaagaaagttgtggattat 102  Q
    ||||| |||||||||||||| |||||||||||||||||| |||  |||  ||| || ||||||||||   |||| |||||||||||||||||||||    
T  2276113 agcattgggtctttaccatgctattcaatgggtgcgagatttaacacttcttcgaatgtagattttggtttggatgccaagaaagttgtggattat 2276018  T

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Target: chr7; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 27804920 - 27804813
Alignment:
Q  30 tattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgatatatcc 129  Q
    |||||||||||| | |||| |||||||| |||| ||||||||||||||||| || ||||||||||| || | ||| || ||  |||| |||||| | |||    
T  27804920 tattcaatgggtacaagaactacaacttacaaatgtagattttgagatggatgcaaagaaagttgtagacttttttaacaaaagtagtaatgatgtgtcc 27804821  T
Q  130 gagtttgg 137  Q
    ||||||||    
T  27804820 gagtttgg 27804813  T

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Target: chr2 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 2)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 178 - 265
Target Start/End: Complemental strand, 32836007 - 32835920
Alignment:
Q  178 tttgaaaactctaagatggagtttagtcgaagacaatcgaatgtggttgctcatgctcttactcgagaagccacttccctagctagtc 265  Q
    ||||||||||||||| | ||||||||||| |||||| |||||| ||| ||||||  |||| | ||||| ||||||| |||||||||||    
T  32836007 tttgaaaactctaaggttgagtttagtcggagacaaacgaatgaggtagctcataatcttgcacgagaggccactttcctagctagtc 32835920  T

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Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 30 - 137
Target Start/End: Complemental strand, 14150542 - 14150435
Alignment:
Q  30 tattcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgatatatcc 129  Q
    |||||||||||| |  ||| |||||||| |||| ||||||||||||||||| || ||||||||||| || | ||| || || ||||| |||||| | ||     
T  14150542 tattcaatgggtacaggaactacaacttacaaatgtagattttgagatggatgcaaagaaagttgtagactgttttaacaaaggtagcaatgatgtgtct 14150443  T
Q  130 gagtttgg 137  Q
    ||||||||    
T  14150442 gagtttgg 14150435  T

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Target: chr1 (Bit Score: 33; Significance: 0.000000002; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 45 - 137
Target Start/End: Original strand, 3214922 - 3215014
Alignment:
Q  45 agaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgatatatccgagtttgg 137  Q
    |||| |||||||| |||| ||||||||||||||||| || ||||||||||| || | ||| || || ||||| ||||||   |||||||||||    
T  3214922 agaactacaacttccaaatgtagattttgagatggatgcaaagaaagttgtagagttttttaacaaaggtagcaatgatgagtccgagtttgg 3215014  T

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Target: chr1; HSP #2
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 253
Target Start/End: Complemental strand, 3158491 - 3158412
Alignment:
Q  174 ttattttgaaaactctaagatggagtttagtcgaagacaatcgaatgtggttgctcatgctcttactcgagaagccactt 253  Q
    ||||||||||||||||||| | ||||||||||| |||||| ||| ||  ||  ||||| ||||| ||||||| |||||||    
T  3158491 ttattttgaaaactctaaggtagagtttagtcggagacaagcgagtgaagtcactcatactcttgctcgagaggccactt 3158412  T

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Target: chr1; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 50 - 140
Target Start/End: Original strand, 12928514 - 12928604
Alignment:
Q  50 tacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgatatatccgagtttggagc 140  Q
    |||||||  |||| || ||||||||  |||| ||||||||||||||||||||||| ||||  || |  ||||||||| |||| ||||||||    
T  12928514 tacaactaacaaatgtggattttgaattggatgccaagaaagttgtggattattttaatagaggaaacaatgatataaccgaatttggagc 12928604  T

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Target: chr1; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 176 - 245
Target Start/End: Complemental strand, 46149379 - 46149310
Alignment:
Q  176 attttgaaaactctaagatggagtttagtcgaagacaatcgaatgtggttgctcatgctcttactcgaga 245  Q
    ||||||||||||||||| ||||||||||| ||| ||||  ||||||||| | |||  ||||| |||||||    
T  46149379 attttgaaaactctaaggtggagtttagttgaaaacaagggaatgtggtcgttcagactcttgctcgaga 46149310  T

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Target: chr5 (Bit Score: 32; Significance: 0.000000007; HSPs: 2)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 174 - 237
Target Start/End: Complemental strand, 14489400 - 14489337
Alignment:
Q  174 ttattttgaaaactctaagatggagtttagtcgaagacaatcgaatgtggttgctcatgctctt 237  Q
    |||||| |||||||||||| || |||||||||| |||||| |||||| ||| |||||| |||||    
T  14489400 ttatttcgaaaactctaaggtgaagtttagtcggagacaagcgaatgaggtcgctcatactctt 14489337  T

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Target: chr5; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 31 - 104
Target Start/End: Complemental strand, 14489543 - 14489470
Alignment:
Q  31 attcaatgggtgcgagaattacaactttcaaacgtagattttgagatggacgccaagaaagttgtggattattt 104  Q
    ||||||||||| |  ||| |||||||| |||| ||||||||||||||||| || |||  |||||| ||||||||    
T  14489543 attcaatgggtacacgaactacaacttacaaatgtagattttgagatggatgcgaagttagttgtagattattt 14489470  T

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Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 68 - 137
Target Start/End: Original strand, 11116054 - 11116123
Alignment:
Q  68 attttgagatggacgccaagaaagttgtggattatttcaataagggtaggaatgatatatccgagtttgg 137  Q
    |||||||| |||| || || || ||||| |||||||| ||||| ||||| |||||||| |||||||||||    
T  11116054 attttgagttggatgcaaaaaaggttgtagattattttaataacggtagtaatgatatttccgagtttgg 11116123  T

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