View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20842_high_1 (Length: 467)

Name: NF20842_high_1
Description: NF20842
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20842_high_1
NF20842_high_1
[»] chr4 (50 HSPs)
chr4 (55-410)||(9770112-9770467)
chr4 (57-411)||(23064737-23065093)
chr4 (76-411)||(5361760-5362093)
chr4 (56-411)||(36120823-36121177)
chr4 (54-408)||(5375666-5376021)
chr4 (56-410)||(9911186-9911541)
chr4 (55-413)||(8889225-8889571)
chr4 (113-411)||(10142898-10143197)
chr4 (99-409)||(17466080-17466390)
chr4 (225-411)||(13023566-13023755)
chr4 (54-214)||(6346728-6346888)
chr4 (257-411)||(13551598-13551752)
chr4 (225-411)||(37240261-37240442)
chr4 (88-273)||(8010943-8011129)
chr4 (55-214)||(7045138-7045299)
chr4 (55-169)||(55476229-55476343)
chr4 (277-410)||(8011212-8011345)
chr4 (57-186)||(13551448-13551577)
chr4 (54-186)||(10394834-10394966)
chr4 (316-409)||(7044728-7044821)
chr4 (55-214)||(24719771-24719923)
chr4 (56-169)||(37240480-37240593)
chr4 (116-214)||(7044959-7045057)
chr4 (55-209)||(7452707-7452860)
chr4 (317-411)||(24719516-24719610)
chr4 (306-411)||(18459733-18459838)
chr4 (316-410)||(4156763-4156857)
chr4 (65-186)||(13023782-13023903)
chr4 (306-406)||(7815561-7815661)
chr4 (55-178)||(18459405-18459528)
chr4 (84-186)||(5943062-5943164)
chr4 (306-411)||(7452419-7452523)
chr4 (63-168)||(4157269-4157377)
chr4 (63-168)||(4157556-4157664)
chr4 (101-175)||(8367437-8367511)
chr4 (331-411)||(6347114-6347194)
chr4 (59-135)||(46664152-46664228)
chr4 (63-134)||(8409792-8409863)
chr4 (115-266)||(9149556-9149709)
chr4 (272-312)||(7044964-7045004)
chr4 (227-266)||(5846065-5846104)
chr4 (359-410)||(9149813-9149864)
chr4 (377-411)||(610686-610720)
chr4 (227-273)||(7825186-7825232)
chr4 (228-266)||(18403672-18403710)
chr4 (228-262)||(24719722-24719756)
chr4 (275-312)||(4157053-4157090)
chr4 (228-273)||(7045078-7045123)
chr4 (229-266)||(55476119-55476156)
chr4 (237-273)||(7815783-7815819)
[»] chr6 (46 HSPs)
chr6 (55-414)||(19748329-19748688)
chr6 (59-410)||(26053074-26053425)
chr6 (59-410)||(26073127-26073478)
chr6 (55-411)||(7223518-7223870)
chr6 (74-410)||(15527903-15528239)
chr6 (54-411)||(23897810-23898166)
chr6 (54-411)||(17543503-17543870)
chr6 (54-411)||(17103201-17103551)
chr6 (54-411)||(11327335-11327701)
chr6 (55-410)||(17250057-17250412)
chr6 (56-411)||(30912181-30912542)
chr6 (55-411)||(27233073-27233407)
chr6 (54-276)||(7918123-7918343)
chr6 (55-212)||(22498214-22498371)
chr6 (225-413)||(21354745-21354925)
chr6 (238-410)||(7918338-7918510)
chr6 (153-413)||(10508889-10509155)
chr6 (239-402)||(22498843-22499006)
chr6 (56-214)||(3573674-3573833)
chr6 (285-411)||(6943464-6943590)
chr6 (61-175)||(31108390-31108504)
chr6 (59-186)||(27614434-27614561)
chr6 (251-407)||(2912218-2912373)
chr6 (55-175)||(27890621-27890741)
chr6 (117-214)||(4841665-4841762)
chr6 (318-413)||(18491074-18491169)
chr6 (331-413)||(5422798-5422880)
chr6 (80-211)||(2912060-2912191)
chr6 (233-288)||(27614594-27614651)
chr6 (94-174)||(20432406-20432486)
chr6 (55-143)||(21354942-21355030)
chr6 (333-408)||(3573984-3574059)
chr6 (59-169)||(33583444-33583554)
chr6 (318-383)||(18490998-18491063)
chr6 (55-175)||(33592925-33593044)
chr6 (68-150)||(31407569-31407651)
chr6 (117-166)||(8275366-8275415)
chr6 (227-266)||(645417-645456)
chr6 (59-150)||(23506102-23506193)
chr6 (227-265)||(5422606-5422644)
chr6 (54-108)||(8275318-8275372)
chr6 (99-133)||(18490522-18490556)
chr6 (59-166)||(1179068-1179177)
chr6 (360-413)||(10958266-10958319)
chr6 (117-166)||(20981363-20981412)
chr6 (227-264)||(27890519-27890556)
[»] chr5 (29 HSPs)
chr5 (57-409)||(18843716-18844068)
chr5 (55-410)||(43234868-43235223)
chr5 (55-411)||(18051307-18051660)
chr5 (55-411)||(19578941-19579299)
chr5 (55-409)||(23172218-23172560)
chr5 (56-399)||(41688441-41688782)
chr5 (56-402)||(27339962-27340307)
chr5 (56-361)||(20320992-20321297)
chr5 (103-413)||(21058978-21059287)
chr5 (55-412)||(22645501-22645850)
chr5 (118-410)||(38158101-38158383)
chr5 (228-345)||(19979664-19979781)
chr5 (285-410)||(20923718-20923843)
chr5 (55-175)||(41427654-41427774)
chr5 (56-165)||(15051872-15051981)
chr5 (56-214)||(43005634-43005792)
chr5 (59-311)||(19042206-19042448)
chr5 (56-169)||(19377844-19377957)
chr5 (54-132)||(6852339-6852417)
chr5 (84-166)||(24648253-24648335)
chr5 (336-408)||(19042444-19042516)
chr5 (78-175)||(22984594-22984695)
chr5 (56-266)||(26021464-26021665)
chr5 (113-160)||(17624851-17624898)
chr5 (55-175)||(13341471-13341591)
chr5 (228-268)||(19377742-19377782)
chr5 (227-266)||(24648160-24648199)
chr5 (97-134)||(15446410-15446447)
chr5 (228-268)||(41427548-41427588)
[»] chr2 (50 HSPs)
chr2 (55-411)||(31237750-31238107)
chr2 (56-411)||(1404782-1405137)
chr2 (54-411)||(20063713-20064079)
chr2 (82-409)||(35565755-35566082)
chr2 (113-411)||(36429847-36430145)
chr2 (80-411)||(15588654-15588979)
chr2 (236-411)||(30432418-30432593)
chr2 (225-408)||(31578007-31578189)
chr2 (55-250)||(19262090-19262285)
chr2 (56-273)||(25538920-25539138)
chr2 (56-212)||(30433013-30433169)
chr2 (54-169)||(20033995-20034110)
chr2 (66-175)||(27523881-27523990)
chr2 (53-175)||(974573-974696)
chr2 (55-169)||(21869095-21869209)
chr2 (281-411)||(23863321-23863451)
chr2 (55-175)||(19245824-19245944)
chr2 (119-301)||(1690566-1690748)
chr2 (54-169)||(7302023-7302138)
chr2 (56-273)||(16766922-16767140)
chr2 (315-412)||(1690796-1690893)
chr2 (284-410)||(19491855-19491982)
chr2 (91-175)||(34578124-34578208)
chr2 (91-214)||(13502483-13502606)
chr2 (56-166)||(8428466-8428576)
chr2 (277-408)||(25539222-25539353)
chr2 (305-411)||(15266081-15266187)
chr2 (113-214)||(27406987-27407088)
chr2 (228-273)||(34841717-34841762)
chr2 (228-268)||(974467-974507)
chr2 (272-312)||(13502561-13502601)
chr2 (367-411)||(19245152-19245196)
chr2 (91-150)||(34167548-34167608)
chr2 (227-262)||(19492079-19492114)
chr2 (272-311)||(27406993-27407032)
chr2 (315-374)||(31023259-31023318)
chr2 (227-266)||(41002156-41002195)
chr2 (315-413)||(5395682-5395780)
chr2 (316-410)||(16766710-16766804)
chr2 (228-266)||(26251658-26251696)
chr2 (116-149)||(9323997-9324030)
chr2 (350-411)||(15627654-15627715)
chr2 (97-134)||(21869215-21869252)
chr2 (227-268)||(21869280-21869321)
chr2 (55-168)||(27749283-27749396)
chr2 (365-410)||(29660893-29660938)
chr2 (97-134)||(34578087-34578124)
chr2 (233-265)||(5395475-5395507)
chr2 (56-147)||(16767185-16767277)
chr2 (80-144)||(23863288-23863352)
[»] chr8 (41 HSPs)
chr8 (58-413)||(5922046-5922400)
chr8 (54-411)||(11879599-11879956)
chr8 (54-411)||(11897015-11897372)
chr8 (60-410)||(45403029-45403379)
chr8 (56-345)||(23142240-23142528)
chr8 (76-408)||(19704252-19704583)
chr8 (102-408)||(15294672-15294977)
chr8 (102-408)||(15475041-15475346)
chr8 (55-411)||(7489057-7489414)
chr8 (55-409)||(29384086-29384444)
chr8 (54-371)||(6810861-6811175)
chr8 (56-410)||(17646993-17647351)
chr8 (56-411)||(31424162-31424518)
chr8 (54-411)||(22909977-22910332)
chr8 (113-342)||(32424400-32424631)
chr8 (225-406)||(3094187-3094378)
chr8 (171-413)||(27836354-27836596)
chr8 (56-211)||(24414062-24414217)
chr8 (228-322)||(9212202-9212296)
chr8 (65-175)||(2040354-2040464)
chr8 (228-406)||(6292289-6292467)
chr8 (63-177)||(16752256-16752370)
chr8 (53-169)||(40541592-40541708)
chr8 (335-411)||(477101-477177)
chr8 (103-214)||(15761180-15761291)
chr8 (98-166)||(7262006-7262074)
chr8 (55-192)||(17566316-17566453)
chr8 (315-415)||(15761473-15761573)
chr8 (96-163)||(27836114-27836181)
chr8 (55-192)||(15231839-15231976)
chr8 (307-411)||(24056594-24056698)
chr8 (366-413)||(23136346-23136393)
chr8 (59-166)||(24056348-24056455)
chr8 (369-413)||(27672303-27672347)
chr8 (139-214)||(8582239-8582314)
chr8 (54-133)||(26879787-26879866)
chr8 (349-411)||(17788374-17788436)
chr8 (228-266)||(40541781-40541819)
chr8 (228-264)||(16752156-16752192)
chr8 (278-310)||(26879778-26879810)
chr8 (278-310)||(30240264-30240296)
[»] chr1 (44 HSPs)
chr1 (55-414)||(9351837-9352196)
chr1 (55-410)||(23528656-23529011)
chr1 (55-413)||(13100188-13100545)
chr1 (55-411)||(18304592-18304941)
chr1 (74-408)||(19009741-19010073)
chr1 (54-411)||(25146541-25146898)
chr1 (64-411)||(9954816-9955165)
chr1 (58-403)||(16125232-16125580)
chr1 (57-411)||(21846050-21846398)
chr1 (55-409)||(42179845-42180193)
chr1 (125-410)||(13276112-13276395)
chr1 (55-409)||(17869524-17869873)
chr1 (55-408)||(12513283-12513626)
chr1 (91-410)||(9128648-9128969)
chr1 (58-322)||(32881415-32881672)
chr1 (225-411)||(9327157-9327345)
chr1 (58-311)||(47785958-47786209)
chr1 (56-192)||(14074258-14074394)
chr1 (55-214)||(17055694-17055852)
chr1 (230-333)||(18228278-18228380)
chr1 (54-209)||(41032546-41032701)
chr1 (272-411)||(41032661-41032800)
chr1 (58-175)||(17197306-17197423)
chr1 (277-411)||(17055995-17056129)
chr1 (54-192)||(30619160-30619296)
chr1 (335-410)||(30619075-30619150)
chr1 (58-169)||(12002638-12002747)
chr1 (315-410)||(14074404-14074499)
chr1 (91-165)||(16434754-16434828)
chr1 (306-411)||(18337547-18337651)
chr1 (55-150)||(27502129-27502224)
chr1 (79-169)||(22789424-22789514)
chr1 (55-108)||(9954770-9954823)
chr1 (349-411)||(34478838-34478900)
chr1 (62-165)||(8773513-8773613)
chr1 (322-410)||(12800622-12800710)
chr1 (96-145)||(9321550-9321599)
chr1 (95-136)||(12002751-12002792)
chr1 (227-268)||(12002818-12002859)
chr1 (54-129)||(13276032-13276104)
chr1 (349-407)||(27917520-27917578)
chr1 (366-411)||(47785791-47785836)
chr1 (359-407)||(12003241-12003289)
chr1 (229-273)||(27917319-27917363)
[»] scaffold0186 (1 HSPs)
scaffold0186 (54-411)||(8442-8797)
[»] chr7 (62 HSPs)
chr7 (56-410)||(44944620-44944978)
chr7 (56-409)||(5058530-5058882)
chr7 (56-372)||(17811385-17811702)
chr7 (63-411)||(27221417-27221762)
chr7 (116-411)||(24725307-24725607)
chr7 (55-410)||(4247356-4247711)
chr7 (56-411)||(14055250-14055610)
chr7 (56-411)||(14365278-14365638)
chr7 (58-404)||(20570662-20571002)
chr7 (113-411)||(8329876-8330175)
chr7 (56-410)||(5715290-5715635)
chr7 (113-408)||(8346363-8346660)
chr7 (59-413)||(8343580-8343932)
chr7 (225-410)||(24990015-24990200)
chr7 (227-413)||(26281256-26281441)
chr7 (55-401)||(11324988-11325333)
chr7 (56-214)||(24989549-24989706)
chr7 (257-411)||(7730319-7730472)
chr7 (120-410)||(6916786-6917068)
chr7 (257-411)||(9685220-9685374)
chr7 (248-410)||(22687631-22687793)
chr7 (286-403)||(8571250-8571367)
chr7 (272-410)||(11326386-11326524)
chr7 (55-209)||(11326484-11326638)
chr7 (272-411)||(39182259-39182397)
chr7 (54-209)||(39182357-39182512)
chr7 (58-175)||(8304321-8304438)
chr7 (55-413)||(26617251-26617608)
chr7 (252-390)||(27509914-27510052)
chr7 (57-186)||(9685070-9685199)
chr7 (54-175)||(25842504-25842625)
chr7 (82-410)||(21846248-21846554)
chr7 (57-175)||(4574965-4575083)
chr7 (56-273)||(26565323-26565540)
chr7 (56-178)||(22687042-22687164)
chr7 (55-212)||(8572336-8572491)
chr7 (56-169)||(23618204-23618317)
chr7 (331-410)||(30294175-30294251)
chr7 (95-211)||(8329793-8329909)
chr7 (80-199)||(1977760-1977878)
chr7 (54-175)||(1981098-1981217)
chr7 (113-215)||(7730191-7730293)
chr7 (55-134)||(10285677-10285756)
chr7 (272-345)||(1977717-1977790)
chr7 (59-211)||(8346244-8346396)
chr7 (55-134)||(8253958-8254037)
chr7 (76-168)||(17741886-17741980)
chr7 (136-214)||(27509267-27509345)
chr7 (56-175)||(21157475-21157587)
chr7 (81-214)||(30294442-30294574)
chr7 (65-169)||(8629512-8629616)
chr7 (56-144)||(26281165-26281251)
chr7 (272-312)||(7730247-7730287)
chr7 (227-266)||(1981282-1981321)
chr7 (94-133)||(17809005-17809044)
chr7 (227-266)||(21157630-21157669)
chr7 (278-312)||(21157522-21157556)
chr7 (228-266)||(25842691-25842729)
chr7 (227-272)||(17809074-17809119)
chr7 (120-169)||(26340212-26340260)
chr7 (349-401)||(17809441-17809493)
chr7 (272-312)||(26565436-26565476)
[»] chr3 (64 HSPs)
chr3 (55-411)||(28745769-28746131)
chr3 (54-412)||(29067282-29067632)
chr3 (59-407)||(39427905-39428258)
chr3 (56-411)||(24619972-24620333)
chr3 (56-412)||(8155904-8156262)
chr3 (56-405)||(17064326-17064661)
chr3 (101-410)||(20756039-20756331)
chr3 (56-412)||(22355841-22356184)
chr3 (55-337)||(42696920-42697202)
chr3 (54-409)||(3449083-3449419)
chr3 (55-175)||(8592173-8592293)
chr3 (54-253)||(25870095-25870294)
chr3 (55-214)||(13286140-13286299)
chr3 (81-401)||(21963438-21963760)
chr3 (81-401)||(21985874-21986196)
chr3 (54-410)||(22137278-22137633)
chr3 (225-392)||(22494732-22494892)
chr3 (55-214)||(6136343-6136502)
chr3 (55-290)||(15515032-15515265)
chr3 (59-214)||(27676632-27676787)
chr3 (277-410)||(24649684-24649818)
chr3 (54-175)||(8560230-8560351)
chr3 (63-175)||(3041458-3041570)
chr3 (55-169)||(20766675-20766789)
chr3 (102-214)||(28135958-28136070)
chr3 (284-410)||(30727694-30727820)
chr3 (306-411)||(27676355-27676460)
chr3 (55-175)||(22971044-22971163)
chr3 (55-163)||(41671426-41671534)
chr3 (56-214)||(10872490-10872648)
chr3 (264-416)||(25870350-25870511)
chr3 (56-175)||(18014226-18014345)
chr3 (57-175)||(19348788-19348906)
chr3 (318-411)||(15806543-15806635)
chr3 (55-175)||(27090677-27090797)
chr3 (55-214)||(9152760-9152917)
chr3 (76-134)||(30727654-30727712)
chr3 (314-411)||(17796267-17796364)
chr3 (314-411)||(17796376-17796473)
chr3 (314-411)||(19104707-19104804)
chr3 (314-411)||(19104816-19104913)
chr3 (55-120)||(24649523-24649588)
chr3 (60-169)||(27055334-27055443)
chr3 (306-400)||(10872971-10873065)
chr3 (60-146)||(13006089-13006174)
chr3 (331-409)||(28135723-28135801)
chr3 (81-169)||(17796806-17796894)
chr3 (81-169)||(19105246-19105334)
chr3 (63-134)||(9169871-9169942)
chr3 (59-175)||(21553671-21553786)
chr3 (314-411)||(17796485-17796582)
chr3 (314-411)||(19104925-19105022)
chr3 (272-312)||(6136457-6136497)
chr3 (228-268)||(8592359-8592399)
chr3 (239-282)||(9152941-9152984)
chr3 (228-266)||(19348684-19348722)
chr3 (228-266)||(27676579-27676617)
chr3 (228-264)||(9169806-9169842)
chr3 (272-312)||(10872603-10872643)
chr3 (272-312)||(13286145-13286185)
chr3 (273-309)||(17796771-17796807)
chr3 (273-309)||(19105211-19105247)
chr3 (272-312)||(27676637-27676677)
chr3 (366-406)||(42696870-42696910)
[»] scaffold0417 (1 HSPs)
scaffold0417 (94-413)||(7268-7587)
[»] scaffold0042 (1 HSPs)
scaffold0042 (115-411)||(93539-93834)
[»] scaffold0016 (2 HSPs)
scaffold0016 (55-215)||(56199-56359)
scaffold0016 (235-289)||(58736-58790)
[»] scaffold0079 (1 HSPs)
scaffold0079 (54-175)||(14699-14820)
[»] scaffold0510 (2 HSPs)
scaffold0510 (272-411)||(91-231)
scaffold0510 (80-209)||(3-131)
[»] scaffold0603 (2 HSPs)
scaffold0603 (53-273)||(8731-8952)
scaffold0603 (315-411)||(9054-9150)
[»] scaffold0017 (2 HSPs)
scaffold0017 (54-175)||(38300-38420)
scaffold0017 (228-268)||(38491-38531)
[»] scaffold0061 (2 HSPs)
scaffold0061 (55-175)||(76083-76202)
scaffold0061 (228-263)||(76273-76308)
[»] scaffold0182 (1 HSPs)
scaffold0182 (63-175)||(24621-24733)
[»] scaffold2084 (1 HSPs)
scaffold2084 (54-157)||(81-184)
[»] scaffold0534 (1 HSPs)
scaffold0534 (55-192)||(888-1025)
[»] scaffold0027 (2 HSPs)
scaffold0027 (113-175)||(132947-133009)
scaffold0027 (228-265)||(133075-133112)
[»] scaffold0028 (1 HSPs)
scaffold0028 (56-169)||(145829-145942)
[»] scaffold0048 (3 HSPs)
scaffold0048 (56-186)||(61089-61219)
scaffold0048 (318-411)||(48825-48918)
scaffold0048 (116-210)||(48497-48591)
[»] scaffold0526 (1 HSPs)
scaffold0526 (55-175)||(8391-8511)
[»] scaffold0036 (1 HSPs)
scaffold0036 (306-411)||(37191-37296)
[»] scaffold0150 (1 HSPs)
scaffold0150 (102-169)||(33179-33246)
[»] scaffold0001 (1 HSPs)
scaffold0001 (116-175)||(142864-142923)
[»] scaffold0115 (1 HSPs)
scaffold0115 (325-410)||(35103-35188)


Alignment Details
Target: chr4 (Bit Score: 209; Significance: 1e-114; HSPs: 50)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 55 - 410
Target Start/End: Complemental strand, 9770467 - 9770112
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| ||||||||| |||||| |||||||||||||||||| || |||||||||||||||||||||| ||||||||||||||| | |    
T  9770467 caaggttgtcaaaatcgggactttactttaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggtc 9770368  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| ||| |||||||||||| ||||| |||||| ||| |||||||| |          ||||||||||||||||| ||||||||||||    
T  9770367 ttttgtagaatcgatatagcaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttatgaatggtatatag 9770268  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    |||||| | ||||||||||||||||||||||||||| |||||||||||||| |||||| ||||||||||||||||||||||||||||||||   ||||||    
T  9770267 tcataagtaacttagtttataagaaatcgtaaaatcgcaatcaaaattgatagattttgtctattttaggattctactatggatttgagtcgttgaaggt 9770168  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||| |||||||||||||||| |||||||| |||||||||| |||||| ||||||||    
T  9770167 gaaaaaagtcacaaaatcctagattttagaatttaagtcgagattttaacaacaat 9770112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 57 - 411
Target Start/End: Original strand, 23064737 - 23065093
Alignment:
Q  57 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactt 156  Q
    |||||||||||||||| |||||||||||||||| ||||||||| | ||||||  | |||||||||||||||||||||  |||||||||| |||| |||||    
T  23064737 aggttgtcaaaatcgggactttacttcaggtcgaaagggaataacgaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttattcaaggactt 23064836  T
Q  157 ttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtc 256  Q
    ||||||||||||| |||||||||||||||| ||||| |||||| |  |||||||||||          |||||||||||||||||||||| ||||  |||    
T  23064837 ttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgaatgattttaccaaaaaataataatactaaatatatgttataaatgatatagggtc 23064936  T
Q  257 ataaatgactta--gtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    ||||||||||||  |||||||||||||||||||||  |||| ||||| |||||||||   ||||||||| ||||||| |||||||||||||   ||| ||    
T  23064937 ataaatgacttatagtttataagaaatcgtaaaattgcaattaaaatcgatggatttgacctattttagaattctacaatggatttgagtcgttgaatgt 23065036  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||| ||||||| ||||||||||| |||||||||||| |||| |||||||||    
T  23065037 gaagaaagttacaaaatactggattttagaatttaagtcggggttttaacaacaatg 23065093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 76 - 411
Target Start/End: Original strand, 5361760 - 5362093
Alignment:
Q  76 tttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctagga 175  Q
    |||| ||||||||| ||| ||| |||||||| || | ||||||||| |||| ||||||| |||| ||||||||||  ||||||||||||||||| || ||    
T  5361760 tttatttcaggtcgaaagagaagagcaaaatagacaatcgtaaaattgcaaacaaaatcgaagggttttactcaactacttttgtagaatcgatatatga 5361859  T
Q  176 aattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttata 275  Q
    ||| ||||||| ||||| ||| || |||||||| |||||          |||||||||||||||| |||||||||||| |||||||||||||||||||||    
T  5361860 aatcgtaaaatcgcaatcaaagtcgatggatttgaccaa--aagaaaaatactaaatatatgttaaaaatggtatataatcataaatgacttagtttata 5361957  T
Q  276 agaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctg 375  Q
    |||||||||||||||||||||||||| ||||| ||||  ||||||| | |||||||||||||||||||||   |||| ||||||||||| ||||||||||    
T  5361958 agaaatcgtaaaatctcaatcaaaatcgatgggttttgcctattttggaattctactatggatttgagtcgttgaagatgaagaaagtcgcaaaatcctg 5362057  T
Q  376 gattttagtatttaagtcgggattttgacaacaatg 411  Q
     ||||||| |||||||||||||||||||||||||||    
T  5362058 aattttaggatttaagtcgggattttgacaacaatg 5362093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 157; E-Value: 3e-83
Query Start/End: Original strand, 56 - 411
Target Start/End: Complemental strand, 36121177 - 36120823
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||||||||||||  |||||||||| || | |||||||||||  ||||| || ||||||||||| |||||||||| || |||||||||||| ||||    
T  36121177 aaggttgtcaaaatcgggtctttacttcaagttgaaagggaatagcttaatcgggactcgtaaaatcggaatcaaaatcgaaagattttactcaaggact 36121078  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    ||||||| |||||| |||||||||||||||| ||||| |||||| ||||||||||||||          |||||||||||| ||||||||||||||||||    
T  36121077 tttgtagtatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaa-aaataataatactaaatatattttataaatggtatatagt 36120979  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| |||| |||||   |||||||| ||| || ||||||||| ||||   |||||||    
T  36120978 cataaatgacttagtatataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttattatggatttaagtcgttgaaggtg 36120879  T
Q  356 aagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||| || |||||||||  ||||||  |||||| |||| |||||||||||||||    
T  36120878 aagaaaatcgcaaaatcctaaattttaaaatttaaatcggaattttgacaacaatg 36120823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 54 - 408
Target Start/End: Complemental strand, 5376021 - 5375666
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||| || |||||||||||||||  ||   ||||| ||||||| || |||||||||||||||||||||| ||||||||||||||| ||    
T  5376021 ccaaggttgtcaaaattgggactttacttcaggtcaaaaataaatagtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaagga 5375922  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc-aacnnnnnnnnntactaaatatatgttataaatggtatat 252  Q
    ||| ||||||||| || ||||||||||||||||  |||| |||||| |||||||||||| ||          |||||||||||||||||||||| |||||    
T  5375921 cttctgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataaatgatatat 5375822  T
Q  253 agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
     ||||||||||||||||||||||||||||||||||||| |||||||| | |||| ||||| |||||||||  |||||| |||| |||| ||||   ||||    
T  5375821 ggtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaagtcgatgaattttgtctattttaaaattctattatgaattttagtcgttgaag 5375722  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 408  Q
    |||||||||||| ||||||| |  ||||||| ||||| || |||||||||||||||    
T  5375721 gtgaagaaagtcgcaaaatcttaaattttagaatttaggttgggattttgacaaca 5375666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 56 - 410
Target Start/End: Original strand, 9911186 - 9911541
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||| |||||||||  | |||||||||||  ||| |||||||||| ||||||| || ||||||||||||||| |||| | ||||||||||||| |  |||    
T  9911186 aagggtgtcaaaattaggactttacttcatatcgaaagggaatagtaaaatcgggactcgtaaaatcgcaataaaaaacgaaggattttactcgagaact 9911285  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    |||||||||||||| || ||||||||||||| ||||| |||||| ||||| ||||||||          |||| ||||||||||||||||||||||||||    
T  9911286 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatacttaatatatgttataaatggtatatagt 9911385  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||  | ||||||||||||||||||||||||  | |   |||||||    
T  9911386 cataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaggattctactatggatttaggccgttgaaggtg 9911485  T
Q  356 aagaaagtcacaaaatcctggattttagta-tttaagtcgggattttgacaacaat 410  Q
    ||||||||  ||||||| || ||||||| | ||||| ||||||||| |||||||||    
T  9911486 aagaaagttgcaaaatcttgaattttaggattttaaatcgggatttagacaacaat 9911541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 55 - 413
Target Start/End: Complemental strand, 8889571 - 8889225
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| | ||| |||||||||| ||| ||  |||||||| || | | |||||||||||| ||||||| |||||| ||||||||  ||    
T  8889571 caaggttgtcaaaatcgggattttgcttcaggtcgaaagagag-agcaaaattgacaattgtaaaatcgcaaccaaaatcgaaggatcttactcaactac 8889473  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    |||||||||||         |||||||||||| ||||| |||||| ||| |||||||||||         |||||||||||| |||||||||||||||||    
T  8889472 ttttgtagaat---------aaattgtaaaatcgcaatcaaaatcgatgaattttaccaacaaaaaaa--tactaaatatatattataaatggtatatag 8889384  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    ||||||| ||||| |||||||||||||||||||||| |||||||||| |||| |||||  ||||||| |||||||| |||| |||||||||   || |||    
T  8889383 tcataaacgacttggtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgggattctattatgaatttgagtcgttgatggt 8889284  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||    
T  8889283 gaagaaattcacaaaatcctggattttaggatttaagtcgggattttgacatcaatggt 8889225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 125; E-Value: 3e-64
Query Start/End: Original strand, 113 - 411
Target Start/End: Complemental strand, 10143197 - 10142898
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    |||||||||||||||||||||| |||||||||| ||||  | ||||||||||||||| || || |||||||||| ||||| |||||  |||||||||| |    
T  10143197 tcgtaaaatcgcaatcaaaatcgaaggattttattcaactaattttgtagaatcgatataagagattgtaaaatcgcaatcaaaattgatggattttatc 10143098  T
Q  213 aacnnnnnnnnn-tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattt 311  Q
    ||           |||||||||||| |||||| |||||||||||||||||||||||  ||||||||||||||||||||| |||||||||| |||||||||    
T  10143097 aaaaaaaaaataatactaaatatatattataattggtatatagtcataaatgacttgatttataagaaatcgtaaaatcacaatcaaaatcgatggattt 10142998  T
Q  312 tttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    | |||||||| | ||| ||||||||| ||||||||  ||||||| |||||||| ||||||  |  ||||||| ||||||||||||||||| |||||||||    
T  10142997 tgtctattttggaattatactatggacttgagtcattgaaggtggagaaagtcgcaaaatattaaattttagaatttaagtcgggattttcacaacaatg 10142898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 99 - 409
Target Start/End: Complemental strand, 17466390 - 17466080
Alignment:
Q  99 agcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaat 198  Q
    ||||||||||| | ||||||||| |||| ||||||  || |||| |||||||  |||||||| |||||||| || ||||||||||||| ||||| |||||    
T  17466390 agcaaaatcgacaatcgtaaaattgcaaacaaaattgaaagattatactcaactacttttgtggaatcgatataagaaattgtaaaattgcaatcaaaat 17466291  T
Q  199 caatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaa 298  Q
    | ||||||||||| |           || ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| |    
T  17466290 cgatggattttacaacaaaaaaataatattaaatatatgttataaatggtatatagtcataaatgacttagtttattagaaatcgtaaaatcgcaatcta 17466191  T
Q  299 aattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggat 398  Q
    ||| ||||||||||   ||||||||||||||| ||||||||||||||    ||| |||||||| || |||||||||  ||||||  |||||||| || ||    
T  17466190 aatcgatggattttgcttattttaggattctattatggatttgagtccttaaagatgaagaaaatcgcaaaatcctaaattttaagatttaagttggaat 17466091  T
Q  399 tttgacaacaa 409  Q
    |||||||||||    
T  17466090 tttgacaacaa 17466080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 225 - 411
Target Start/End: Complemental strand, 13023755 - 13023566
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttcta--tttta 322  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||| ||| |||||| ||||  ||||     
T  13023755 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcgattgattttatctattttttg 13023656  T
Q  323 ggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgga-ttttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||||||||||||||||  |||||||||||||||| |||||||||  | |||||| |||||||| ||||||||||||||||||    
T  13023655 ggattctactatggatttgagtcattgaaggtgaagaaagtcgcaaaatcctaaatttttaggatttaagttgggattttgacaacaatg 13023566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 54 - 214
Target Start/End: Original strand, 6346728 - 6346888
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||||| ||| |||||||||| ||||||| ||||||||||| | |||||||||| ||||||||||| |||||||||||||||  |    
T  6346728 ccaaggttgtcaaaatcggaaatttgcttcaggtcgaaagggaagagcaaaatcgaaaatcgtaaaatcacaatcaaaatcgaaggattttactcaacta 6346827  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||||||||  || || ||||||||||||| ||||| |||||| |||||||| |||||    
T  6346828 cttttgtagaatgaatataagaaattgtaaaatcgcaatcaaaatcgatggatttcaccaa 6346888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 257 - 411
Target Start/End: Original strand, 13551598 - 13551752
Alignment:
Q  257 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 356  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||   |||||| ||||||||||||||   ||||||||    
T  13551598 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 13551697  T
Q  357 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    | |||||| |||||||||  ||||||| || ||||||| ||||||||||||||||    
T  13551698 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatg 13551752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 225 - 411
Target Start/End: Complemental strand, 37240442 - 37240261
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagg 324  Q
    ||||||||||||| ||||||||||||| |||||||||||||||| ||||||||||||||||||||| |||||||||| |||| ||| |  ||||||| ||    
T  37240442 tactaaatatatgatataaatggtatagagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattatgcctatttt-gg 37240344  T
Q  325 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
     ||||||||||||||||||||   ||||||||| ||||||  ||    ||  ||||||| |||||||| |||||||| |||||||||    
T  37240343 gttctactatggatttgagtcgttgaaggtgaaaaaagtcgtaa----ctaaattttaggatttaagtagggattttaacaacaatg 37240261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 88 - 273
Target Start/End: Original strand, 8010943 - 8011129
Alignment:
Q  88 cggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaata 187  Q
    ||||||||||||||||||||| || |||||||||||||||||||||| |||||||||||||||  | |||| |||||||||| || |||||||||||||     
T  8010943 cggaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactatttttatagaatcgatataagaaattgtaaaatc 8011042  T
Q  188 gcaattaaaatcaatggattttacc-aacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagttta 273  Q
    ||||| |||||| ||| |||||||| ||          | ||||||||||||||||||| ||||||| | |||||||| ||||||||    
T  8011043 gcaatcaaaatcgatgtattttaccaaaacaaaaataatgctaaatatatgttataaattgtatataattataaatgaattagttta 8011129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 214
Target Start/End: Complemental strand, 7045299 - 7045138
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| |||| |||||||||||||| ||||||| ||||||||| | | || ||||||||||||||||||| |||||||||||||||   |    
T  7045299 caaggttgtcaaaataggaattttacttcaggtcgaaagggaagagcaaaatcaaaaatcataaaatcgcaatcaaaatcgaaggattttactcaactgc 7045200  T
Q  155 ttttgtagaatc--gatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||  ||||||  ||| || ||||| |||||||| |||| |||||| |||||| |||||||    
T  7045199 ttttcaagaatcgagatataagaaatcgtaaaatatcaatcaaaatctatggatcttaccaa 7045138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Complemental strand, 55476343 - 55476229
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||| |||||||||| ||||||||||| |||| |||||| ||  |||||||  | |||||||||||||||||||||| ||||||||||||||| |||    
T  55476343 caaggttatcaaaatcgggactttacttcaagtcgaaagggagtaataaaatcggtactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 55476244  T
Q  155 ttttgtagaatcgat 169  Q
    |||||||||||||||    
T  55476243 ttttgtagaatcgat 55476229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 277 - 410
Target Start/End: Original strand, 8011212 - 8011345
Alignment:
Q  277 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 376  Q
    ||||||| |||||| |||||||||| |||| |||||    ||||| |||||||||||||||||||||||   |||||||||||||||| ||||||||||     
T  8011212 gaaatcgcaaaatcgcaatcaaaatcgatgaattttgctcattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctga 8011311  T
Q  377 attttagtatttaagtcgggattttgacaacaat 410  Q
    ||||||| |||| ||| |||||||||||||||||    
T  8011312 attttaggatttgagttgggattttgacaacaat 8011345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 13551448 - 13551577
Alignment:
Q  57 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactt 156  Q
    ||||||| || ||| | |||||||||| ||||| || |||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||| | |||||    
T  13551448 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggactt 13551547  T
Q  157 ttgtagaatcgatctaggaaattgtaaaat 186  Q
    || |||||||||| ||| ||||| ||||||    
T  13551548 ttatagaatcgatttagaaaattttaaaat 13551577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 54 - 186
Target Start/End: Complemental strand, 10394966 - 10394834
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||| |||| ||| ||||| || | || | || ||||||||| | | |||||||||||||||||||||| ||||| |||||||||  |    
T  10394966 ccaaggttgtcaaaattggaattttgcttcaagttgaaaagaaagagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcgaaggactttactcaacta 10394867  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaat 186  Q
    |||||||||||||| | |||||||| |||||||    
T  10394866 cttttgtagaatcggtataggaaatcgtaaaat 10394834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 316 - 409
Target Start/End: Complemental strand, 7044821 - 7044728
Alignment:
Q  316 tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    |||||| ||||||| |||||||||||||||   ||||||||| |||||  ||||||| |||||||||| |||||||||||||||||||||||||    
T  7044821 tattttgggattctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcatggattttaggatttaagtcgggattttgacaacaa 7044728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 55 - 214
Target Start/End: Complemental strand, 24719923 - 24719771
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||  | ||| |||||||||| ||||||| |||||||||||       ||||||| ||||| |||| ||||||||||||| |  ||    
T  24719923 caaggttgtcaaaatcgagattttgcttcaggtcgaaagggaagagcaaaatcga-------aaaatcgaaatcacaatcgaaggattttactcgattac 24719831  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||||||||||| || ||||| ||||||| ||||| |||||| |||  |||||||||    
T  24719830 ttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaaatcgatgagttttaccaa 24719771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 37240593 - 37240480
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||  ||  ||| ||||||| || ||| ||| ||| ||||||| | |||||||||||||||||||||| |||||||||||||||  |||    
T  37240593 aaggttgtcaaaattagagttttgcttcaggacgaaagagaagagctaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 37240494  T
Q  156 tttgtagaatcgat 169  Q
    ||||||||||||||    
T  37240493 tttgtagaatcgat 37240480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 116 - 214
Target Start/End: Complemental strand, 7045057 - 7044959
Alignment:
Q  116 taaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||||||||||||||| || ||||||||||||  ||||||| | ||||||| || ||||| |||||||| |||| |||||| ||||||||||||||    
T  7045057 taaaatcgcaatcaaaatcgaatgattttactcaactacttttgaataatcgatataagaaatcgtaaaatatcaatcaaaatcgatggattttaccaa 7044959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 7452860 - 7452707
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||  | | ||| |||||||||| ||||||| || ||| | || | |||||||||||||||||||||| ||||| |||||||||  ||    
T  7452860 caaggttgtcaaaattaggattttgcttcaggtcgaaagggaagagaaaagttgaaaatcgtaaaatcgcaatcaaaatcgaagga-tttactcaactac 7452762  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggatttt 209  Q
    |||||||||||| || || ||||| ||||||   ||| ||||||| |||||||||    
T  7452761 ttttgtagaatcaatatacgaaatcgtaaaagcacaactaaaatcgatggatttt 7452707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 317 - 411
Target Start/End: Complemental strand, 24719610 - 24719516
Alignment:
Q  317 attttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||||| |||||||||||||||   ||||||||| |||||| ||||||| || ||||||| | |||||||| ||||||||||||||||    
T  24719610 attttaggattctgctatggatttgagtcgttgaaggtgaataaagtcgcaaaatcttgaattttagaaattaagtcgagattttgacaacaatg 24719516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 306 - 411
Target Start/End: Original strand, 18459733 - 18459838
Alignment:
Q  306 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 405  Q
    |||||||  ||||||||||||||| |||||||||||||||   ||| ||||| | |||| ||||||| |||||||||| |||| |||||||||||| |||    
T  18459733 ggattttgcctattttaggattctgctatggatttgagtcgttgaaagtgaatacagtcgcaaaatcttggattttaggattttagtcgggatttttaca 18459832  T
Q  406 acaatg 411  Q
    ||||||    
T  18459833 acaatg 18459838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 316 - 410
Target Start/End: Complemental strand, 4156857 - 4156763
Alignment:
Q  316 tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||||||||||||||||||  ||||||||||    |||||||| ||||||| ||||||||  ||||||  ||||||||||||||||||||||||||    
T  4156857 tattttaggattctactacagatttgagtcgttaaaggtgaataaagtcataaaatcctaaattttaagatttaagtcgggattttgacaacaat 4156763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 65 - 186
Target Start/End: Complemental strand, 13023903 - 13023782
Alignment:
Q  65 aaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaa 164  Q
    ||||| || ||||||||||| |||| ||| ||||||||||||||  | |||||||||| ||||||| ||  || |||||||| ||| || ||||||| ||    
T  13023903 aaaattgggactttacttcaagtcgaaagagaatagcaaaatcggaactcgtaaaatcacaatcaagatagaatgattttacccaaggaattttgtaaaa 13023804  T
Q  165 tcgatctaggaaattgtaaaat 186  Q
    ||||| ||||||||| ||||||    
T  13023803 tcgatataggaaattttaaaat 13023782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 306 - 406
Target Start/End: Complemental strand, 7815661 - 7815561
Alignment:
Q  306 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 405  Q
    |||||||  ||||||| |||||||||||||| ||||||||    ||| |||| ||||||||||||| ||| ||||||| ||||||||||||||||| |||    
T  7815661 ggattttgcctattttgggattctactatgggtttgagtcgcttaagctgaataaagtcacaaaatgctgtattttaggatttaagtcgggattttaaca 7815562  T
Q  406 a 406  Q
    |    
T  7815561 a 7815561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 178
Target Start/End: Original strand, 18459405 - 18459528
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||  | ||| |||||||| | |||| || ||||||||||| | ||||||||||||||| |||||| |||||||| ||| ||  |     
T  18459405 caaggttgtcaaaatcgagattttgcttcaggttgaaaggaaagagcaaaatcgacaatcgtaaaatcgcaattaaaatcgaaggatttgacttaactaa 18459504  T
Q  155 ttttgtagaatcgatctaggaaat 178  Q
    ||||||||||| ||| || |||||    
T  18459505 ttttgtagaattgatataagaaat 18459528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 84 - 186
Target Start/End: Original strand, 5943062 - 5943164
Alignment:
Q  84 aggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaa 183  Q
    |||||| ||||||| ||||||||| | | ||||||||||||||  |||||  |||||||||||||||  ||||||||||||||| | || ||||| ||||    
T  5943062 aggtcgaaagggaagagcaaaatcaaaaatcgtaaaatcgcaagtaaaattgaaggattttactcaactacttttgtagaatcggtttaagaaatcgtaa 5943161  T
Q  184 aat 186  Q
    |||    
T  5943162 aat 5943164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 306 - 411
Target Start/End: Complemental strand, 7452523 - 7452419
Alignment:
Q  306 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 405  Q
    |||||||  |||| |||||| || |||||||||| |||||   ||||||||| |||||  |||||| ||||||||||| ||||||||||||||||| |||    
T  7452523 ggattttgcctatattaggaatccactatggatt-gagtcgttgaaggtgaataaagttgcaaaattctggattttagaatttaagtcgggattttcaca 7452425  T
Q  406 acaatg 411  Q
    ||||||    
T  7452424 acaatg 7452419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 4157377 - 4157269
Alignment:
Q  63 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattc---gtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttg 159  Q
    |||||||||| | ||| ||| | |||| ||||||| ||||||||||| | ||   |||||||||||||||| ||| || ||||||||||||  |||||||    
T  4157377 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157278  T
Q  160 tagaatcga 168  Q
    |||||||||    
T  4157277 tagaatcga 4157269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 63 - 168
Target Start/End: Complemental strand, 4157664 - 4157556
Alignment:
Q  63 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattc---gtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttg 159  Q
    |||||||||| | ||| ||| | |||| ||||||| ||||||||||| | ||   |||||||||||||||| ||| || ||||||||||||  |||||||    
T  4157664 tcaaaatcgggattttgctttaagtcgaaagggaagagcaaaatcgaaaatcattgtaaaatcgcaatcaagatcgaaagattttactcaactacttttg 4157565  T
Q  160 tagaatcga 168  Q
    |||||||||    
T  4157564 tagaatcga 4157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 101 - 175
Target Start/End: Complemental strand, 8367511 - 8367437
Alignment:
Q  101 caaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctagga 175  Q
    |||||||| || ||||||||| |||||||||||| ||||||||||||||| |||||| |||  |||||| |||||    
T  8367511 caaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggactttggtaatatcgatatagga 8367437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 331 - 411
Target Start/End: Original strand, 6347114 - 6347194
Alignment:
Q  331 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||   |||||| || |||||  |||||||||||||||||| |||||||| || |||||||||| ||||    
T  6347114 ctatggatttgagtcgttgaaggtaaataaagttgcaaaatcctggattttaggatttaagttggaattttgacaataatg 6347194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 59 - 135
Target Start/End: Original strand, 46664152 - 46664228
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca 135  Q
    ||||||||||| || | ||| |||||||||| || | |||||||||||||| | ||| |||||||||||||||||||    
T  46664152 gttgtcaaaattgggattttgcttcaggtcgaaaagaaatagcaaaatcgaaaatcggaaaatcgcaatcaaaatca 46664228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 8409863 - 8409792
Alignment:
Q  63 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    |||||||||| ||||||||||| || | |||||| ||||||||| ||||||  |||||||| ||||||||||    
T  8409863 tcaaaatcgggactttacttcaagttgaaagggagtagcaaaattgagatttataaaatcgtaatcaaaatc 8409792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 115 - 266
Target Start/End: Original strand, 9149556 - 9149709
Alignment:
Q  115 gtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaata-gcaattaaaatcaatggattttacc- 212  Q
    |||||||  ||||||||||  |||||||||||||||  ||||| ||||||||||| || ||||| |||||| | ||||| |||||  || |||||||||     
T  9149556 gtaaaattccaatcaaaattgaaggattttactcaactactttcgtagaatcgatataagaaatcgtaaaaaacgcaatcaaaattgatagattttacca 9149655  T
Q  213 aacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||          | ||||||||||||||||||| ||||||||| ||||||||||    
T  9149656 aaagaaaaataatgctaaatatatgttataaattgtatatagttataaatgact 9149709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 7045004 - 7044964
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    |||||||||||||||||| ||||||||||| ||||||||||    
T  7045004 tataagaaatcgtaaaatatcaatcaaaatcgatggatttt 7044964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 5846065 - 5846104
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||||||||||||||||||| |||||| |||||||||||||    
T  5846065 ctaaatatatgttataaattgtatattgtcataaatgact 5846104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 359 - 410
Target Start/End: Original strand, 9149813 - 9149864
Alignment:
Q  359 aaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||| |||||||||  ||||||| |||||||||||||||||||| |||||    
T  9149813 aaagtcgcaaaatcctaaattttaggatttaagtcgggattttgaccacaat 9149864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 377 - 411
Target Start/End: Original strand, 610686 - 610720
Alignment:
Q  377 attttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| ||||||||||||||||||    
T  610686 attttagtatttaagttgggattttgacaacaatg 610720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 273
Target Start/End: Complemental strand, 7825232 - 7825186
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgacttagttta 273  Q
    ||||||| | ||||||||| |||||||||||||||||||| ||||||    
T  7825232 ctaaatacaagttataaattgtatatagtcataaatgactcagttta 7825186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 18403710 - 18403672
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgact 266  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  18403710 taaatatatgttataaattgtatatagtcatgaatgact 18403672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 262
Target Start/End: Complemental strand, 24719756 - 24719722
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaat 262  Q
    |||||||||||||||||| ||||||||||||||||    
T  24719756 taaatatatgttataaattgtatatagtcataaat 24719722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 275 - 312
Target Start/End: Complemental strand, 4157090 - 4157053
Alignment:
Q  275 aagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    |||||||||||||||| |||||||||| ||||||||||    
T  4157090 aagaaatcgtaaaatcgcaatcaaaatcgatggatttt 4157053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 7045123 - 7045078
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgacttagttta 273  Q
    |||||||||||||||| | ||||||||| |||||||||| ||||||    
T  7045123 taaatatatgttataatttgtatatagtgataaatgactcagttta 7045078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 229 - 266
Target Start/End: Complemental strand, 55476156 - 55476119
Alignment:
Q  229 aaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||||||||||||||||| | ||||||||||||||||||    
T  55476156 aaatatatgttataaattgcatatagtcataaatgact 55476119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 237 - 273
Target Start/End: Complemental strand, 7815819 - 7815783
Alignment:
Q  237 gttataaatggtatatagtcataaatgacttagttta 273  Q
    ||||||||| |||||||||||||||||||| ||||||    
T  7815819 gttataaattgtatatagtcataaatgactcagttta 7815783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 205; Significance: 1e-112; HSPs: 46)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 205; E-Value: 1e-112
Query Start/End: Original strand, 55 - 414
Target Start/End: Complemental strand, 19748688 - 19748329
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| |||||| ||||||| | |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| |||    
T  19748688 caaggttgtcaaaatcgggactttaattcaggttgaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 19748589  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||           |||||||||||| ||||||||| |||||||    
T  19748588 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccagaaaataataatactaaatatattttataaatgatatatag 19748489  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    || ||||||||||||||||||||||||||||||||| |||||||||| |||| |||||  |||||||| |||||||||| ||||||||||||   |||||    
T  19748488 tcttaaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcctattttaagattctactacggatttgagtcattaaaggt 19748389  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggtg 414  Q
    ||||||| || |||||||||||||| ||  ||||||||||||||||||| ||||||||||    
T  19748388 gaagaaaatctcaaaatcctggattgtaagatttaagtcgggattttgaaaacaatggtg 19748329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 59 - 410
Target Start/End: Original strand, 26053074 - 26053425
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| | || |||||||||| ||||||||||| || |||||||||||| |||||||    
T  26053074 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26053173  T
Q  159 gtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcat 258  Q
    ||||||||||| | |||||||||||||| ||||| |||||| ||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  26053174 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcat 26053273  T
Q  259 aaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaag 358  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||   |||||| |||||||| |||| ||||||||||  ||||||||||    
T  26053274 aaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaag 26053373  T
Q  359 aaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||| ||||||||| |||||||  ||||||||||||||||||||||||||    
T  26053374 aaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26053425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 193; E-Value: 1e-105
Query Start/End: Original strand, 59 - 410
Target Start/End: Original strand, 26073127 - 26073478
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    |||||||||||| | |||||||||||||||| |||| ||||||||||| | || |||||||||| ||||||||||| || |||||||||||| |||||||    
T  26073127 gttgtcaaaatcaggactttacttcaggtcgaaaggaaatagcaaaattgggactcgtaaaatcccaatcaaaatcgaatgattttactcaatgactttt 26073226  T
Q  159 gtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcat 258  Q
    ||||||||||| | |||||||||||||| ||||| |||||| ||||||||||||||          |||||| |||||||||||||||||||||||||||    
T  26073227 gtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaataataatactaactatatgttataaatggtatatagtcat 26073326  T
Q  259 aaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaag 358  Q
    |||| ||||||||||||||||||||||||||  |||||||||||||||||||||   |||||| |||||||| |||| ||||||||||  ||||||||||    
T  26073327 aaataacttagtttataagaaatcgtaaaatgacaatcaaaattgatggattttgcttattttgggattctattatgaatttgagtcattgaaggtgaag 26073426  T
Q  359 aaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||| ||||||||| |||||||  ||||||||||||||||||||||||||    
T  26073427 aaagtcgcaaaatcctagattttaagatttaagtcgggattttgacaacaat 26073478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 55 - 411
Target Start/End: Complemental strand, 7223870 - 7223518
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| |||||||||||||||| |||||||||||||||||| || ||||||||| |||||||||||| ||||||||||||||| |||    
T  7223870 caaggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaaggac 7223771  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntacta----aatatatgttataaatggtat 250  Q
    ||||||||||||||| |||||||||||||||| ||||| | |||||||||||||||||||          |||||    |||||||||||||||||||||    
T  7223770 ttttgtagaatcgatataggaaattgtaaaatcgcaatcagaatcaatggattttaccaa-acaaaataatactaaattaatatatgttataaatggtat 7223672  T
Q  251 atagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggga 350  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||   |||||| | |||||||||||||||| ||           
T  7223671 atagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttggaattctactatggatttaag------- 7223579  T
Q  351 aggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||| |||||||||  ||||||| |||||||||||||||||||||||||||    
T  7223578 aggtgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaatg 7223518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 74 - 410
Target Start/End: Original strand, 15527903 - 15528239
Alignment:
Q  74 actttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctag 173  Q
    |||||||||||||||| |||| |||||||||||||  | ||| |||||||||||||||||| ||||||||||||||| |||||||||||||||||| |||    
T  15527903 actttacttcaggtcgaaaggaaatagcaaaatcggaactcggaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaatcgatatag 15528002  T
Q  174 gaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagttta 273  Q
    ||||||||||||| |||||  ||||| ||||||||  || |          ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15528003 gaaattgtaaaatcgcaatcgaaatcgatggatttcccccaaaaaatttaatactaaatatatgttataaatggtatatagttataaatgacttagttta 15528102  T
Q  274 taagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcc 373  Q
    ||||||||||||||||| ||||| |||| |||||||||| ||||||||| |||||||||||| |||| ||||    ||||||||||||||| ||||||||    
T  15528103 taagaaatcgtaaaatcgcaatcgaaatcgatggattttgtctattttaagattctactatgaatttaagtcgttaaaggtgaagaaagtcgcaaaatcc 15528202  T
Q  374 tggattttagtatttaagtcgggattttgacaacaat 410  Q
    || ||||||| ||||||||||||||||||||||||||    
T  15528203 tgaattttaggatttaagtcgggattttgacaacaat 15528239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 54 - 411
Target Start/End: Complemental strand, 23898166 - 23897810
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||| ||||||||||||| | ||| |||||||||| | | ||| ||||||||||| | ||||||||||| || ||||||| |||||||||||||||  |    
T  23898166 ccaagattgtcaaaatcgggattttgcttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaacta 23898067  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    |||| ||||||||||| || |||||||||||||  |||| |||||| ||||||||||||||          |||||||||||||||||||||||||||||    
T  23898066 cttt-gtagaatcgatataagaaattgtaaaatctcaatcaaaatcgatggattttaccaaaaaaaaaaaatactaaatatatgttataaatggtatata 23897968  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||   ||||||||| ||| |||||||||||||||||   ||| |    
T  23897967 gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttcgcctattttagaattttactatggatttgagtcgttgaacg 23897868  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||| |||||||||| ||||||| |||||||||||||| ||  ||||||||    
T  23897867 tgaagaaagtcgcaaaatcctgcattttaggatttaagtcgggatcttatcaacaatg 23897810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 162; E-Value: 3e-86
Query Start/End: Original strand, 54 - 411
Target Start/End: Original strand, 17543503 - 17543870
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||| ||||| || |||||||||||||||| || ||||||||||||||| || || |||||||| |||||||||| ||||||||||||||| ||    
T  17543503 ccaaggttgttaaaattgggactttacttcaggtcgaaaaggaatagcaaaatcgggactcataaaatcgaaatcaaaatcgaaggattttactcaagga 17543602  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn----------tactaaatatatgttataa 243  Q
    |||||||||||||||| | |||||||||||||| ||||| |||||| ||||||||||||||                    |||||||||||||||||||    
T  17543603 cttttgtagaatcgatattggaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaataaaaaaaaaataataatactaaatatatgttataa 17543702  T
Q  244 atggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgag 343  Q
    ||||||||||||| |||||||||||||||||||||||| |||||||| ||||||||||  || ||||||   ||||||| ||||||||||||||||||||    
T  17543703 atggtatatagtcgtaaatgacttagtttataagaaatagtaaaatcgcaatcaaaatccatagattttgcttattttaagattctactatggatttgag 17543802  T
Q  344 tcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||   ||| ||||| |||||| |||||||||| ||||||| |||||||||| ||||||||||||||||    
T  17543803 tcgttgaaagtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgagattttgacaacaatg 17543870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 161; E-Value: 1e-85
Query Start/End: Original strand, 54 - 411
Target Start/End: Complemental strand, 17103551 - 17103201
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||| ||||||||||| |||| ||||||||| |||||||  || |||||||||||||||||| | | ||||||||||||||| ||    
T  17103551 ccaaggttgtcaaaatcgggactttacttcaagtcgaaagggaataacaaaatcaggactcgtaaaatcgcaatcaataccgaaggattttactcaagga 17103452  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    |||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||| |          || ||||||||||| ||||||| ||||||    
T  17103451 cttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacctaaaaaaattaataataaatatatgtcataaatgatatata 17103352  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    ||| ||||| |||||||||||||||||||||||||||  ||||||||| |||||||||| |||||||| ||||||||||||| |||||||||   ||| |    
T  17103351 gtcgtaaataacttagtttataagaaatcgtaaaatcgtaatcaaaatcgatggattttgtctattttgggattctactatgcatttgagtcgttgaaag 17103252  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |       ||| |||||||||| ||||||  |||||||||||||||||||||||||||    
T  17103251 t-------gtcgcaaaatcctgaattttaagatttaagtcgggattttgacaacaatg 17103201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 54 - 411
Target Start/End: Original strand, 11327335 - 11327701
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||    
T  11327335 ccaaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaagga 11327434  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc---------aacnnnnnnnnntactaaatatatgttataaa 244  Q
    |||||||||||||||| |||||||||||||||| ||||  |||||| ||||||||||||         ||           | |||||| |||| |||||    
T  11327435 cttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttaccaaaaaaaataaaataaataataaataaatacatgtgataaa 11327534  T
Q  245 tggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagt 344  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||||| |||| ||||| |||| |||||  ||||||| |||||||||||||||||| |||    
T  11327535 tggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagt 11327634  T
Q  345 cagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |   |||| ||||||||  | ||||| | ||||||||||  ||||||||||||||||||||||||||    
T  11327635 ccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 11327701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 55 - 410
Target Start/End: Complemental strand, 17250412 - 17250057
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaa--aggattttactcaaag 152  Q
    ||||||| |||||||||| |||||||||||||||| |||| ||| || || | | || ||||||||||||||||||||| ||  |||||||||||||| |    
T  17250412 caaggttatcaaaatcgggactttacttcaggtcgaaaggaaatggcgaattgg-gactcgtaaaatcgcaatcaaaataaagaaggattttactcaagg 17250314  T
Q  153 acttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatat 252  Q
     |||| |||||||||   ||| |||||||||| | ||||| |||||||||||||||||||||          || ||||||||| ||||||||  |||||    
T  17250313 tctttagtagaatcgccatagaaaattgtaaattcgcaatcaaaatcaatggattttaccaaaaaacaatagtaataaatatatattataaatt-tatat 17250215  T
Q  253 agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||  ||| |||||  ||||||| |||||||| ||||||||| ||||   ||||    
T  17250214 agtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatgaattttgcctattttgggattctagtatggatttaagtcgttgaag 17250115  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||||  |||||||||||||||||| ||||||||||||||||| ||||||||    
T  17250114 gtgaagaaagttgcaaaatcctggattttaggatttaagtcgggattttaacaacaat 17250057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 56 - 411
Target Start/End: Original strand, 30912181 - 30912542
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||||| ||| |||||||| | ||| ||||||||||||||| | |||||||||| ||| ||||||  |||||||||| ||||  |||    
T  30912181 aaggttgtcaaaatcggaattttgcttcaggttgaaagagaatagcaaaatcgataatcgtaaaatctcaaccaaaattgaaggattttattcaactact 30912280  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttac------caacnnnnnnnnntactaaatatatgttataaatggta 249  Q
    |||||| ||||||| || |||||  || ||| ||||| | |||| |||||||||||      ||           |||||||||||||| ||||||| ||    
T  30912281 tttgtaaaatcgatataagaaatcatagaatcgcaatcataatcgatggattttacttttaccacaaaaaaataatactaaatatatgtgataaatgata 30912380  T
Q  250 tatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggg 349  Q
    |||| |||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||  |||||||  ||||||| ||||||||||||||   |    
T  30912381 tataatcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatctatggattttgcctattttgtgattctattatggatttgagtcgttg 30912480  T
Q  350 aaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||||||| |||||||||  ||||||| |||||||| ||||||||||||||||||    
T  30912481 aaggtgaagaaagtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 30912542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 55 - 411
Target Start/End: Original strand, 27233073 - 27233407
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||   ||||||||||||||  ||||||||  |||||||| || || ||||||||||||||||||  ||||||||||||||| | |    
T  27233073 caaggttgtcaaaatcgagcctttacttcaggtcaaaagggaatgacaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcaaggtc 27233172  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||| ||||||||| | ||| |||||||||||| ||||| |||||| || ||||||||||           ||||||||||||||||||||||||||        
T  27233173 tttagtagaatcgctatagaaaattgtaaaatcgcaatcaaaatcgatagattttaccataaaacaataatactaaatatatgttataaatggtat---- 27233268  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
                      |||||||||| ||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||| ||||   ||||||    
T  27233269 ------------------ataagaaatcataaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatttaagtcgttgaaggt 27233350  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||||||||||||||||||||| ||||||||||| | |||||||||||||    
T  27233351 gaagaaagtcacaaaatcctggattttaggatttaagtcggtagtttgacaacaatg 27233407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 54 - 276
Target Start/End: Original strand, 7918123 - 7918343
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||||||  ||||||||||||||| |||||||||||| ||||  || ||||||||| |||||||||||| ||| ||||||||||| ||    
T  7918123 ccaaggttgtcaaaatcggggctttacttcaggtcgaaagggaatagcagaatcaggactcgtaaaattgcaatcaaaatcgaagaattttactcaagga 7918222  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    ||||||||||||| || |||||||||||||||| ||||| |||||| ||||||||||||||          |||||||| ||||||||||||| ||||||    
T  7918223 cttttgtagaatcaatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaa--aaaaataatactaaatttatgttataaatgatatata 7918320  T
Q  254 gtcataaatgacttagtttataa 276  Q
    ||||||||||||||| |||||||    
T  7918321 gtcataaatgacttaatttataa 7918343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 55 - 212
Target Start/End: Original strand, 22498214 - 22498371
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| || |||||||||||||||| |||||||||||||||| | || |||||||||||||||||||||  || ||||||||||||||||    
T  22498214 caaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaatcgcaatcaaaattgaacgattttactcaaagac 22498313  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||||    
T  22498314 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacc 22498371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 225 - 413
Target Start/End: Complemental strand, 21354925 - 21354745
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagg 324  Q
    |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |||| ||||  |||||||||| |||||||| ||    
T  21354925 tactaaatatatgttataaatggtatatagtcataaattacttagtttataagaaatcgtaaaatcgcaataaaaaacgatggattttgtctattttggg 21354826  T
Q  325 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||||| |||||||| ||||   |||||| |||||||        ||| ||||||||| |||||||| ||||||||||||||||||||    
T  21354825 attctaccatggatttaagtcgttgaaggtaaagaaag--------tccaggattttaggatttaagttgggattttgacaacaatggt 21354745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 93; E-Value: 4e-45
Query Start/End: Original strand, 238 - 410
Target Start/End: Original strand, 7918338 - 7918510
Alignment:
Q  238 ttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatgga 337  Q
    ||||||||| ||||||||||||||||||||| ||||||| |||||| |||||| |||||||||| ||| ||||||   ||| |||||||| |||||||||    
T  7918338 ttataaatgatatatagtcataaatgacttaatttataaaaaatcgcaaaatcccaatcaaaatcgattgattttgcttatgttaggattttactatgga 7918437  T
Q  338 tttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||| ||||   ||||||||| |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  7918438 tttaagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaat 7918510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 86; E-Value: 6e-41
Query Start/End: Original strand, 153 - 413
Target Start/End: Original strand, 10508889 - 10509155
Alignment:
Q  153 acttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn-tactaaatatatgttataaatg----- 246  Q
    ||||||||||||||||| || ||||||||||||| ||||| |||||  |||||||||| |||           || |||||||||||||||||||         
T  10508889 acttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaattgatggattttatcaaaataataataataataaatatatgttataaatgactta 10508988  T
Q  247 -gtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtc 345  Q
     ||||||||| |||||||||||||||||||| || ||||||||||  ||||||||| |||| |||||  ||||||| ||||||||||||  |||||||||    
T  10508989 ggtatatagt-ataaatgacttagtttataataagtcgtaaaatcgtaatcaaaatcgatgaattttgcctattttgggattctactataaatttgagtc 10509087  T
Q  346 agggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    |  ||| ||||||||||||||||| | ||| ||||||| ||||||||| |||||||||||| ||||||    
T  10509088 attgaatgtgaagaaagtcacaaatttctgaattttaggatttaagtctggattttgacaataatggt 10509155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 239 - 402
Target Start/End: Original strand, 22498843 - 22499006
Alignment:
Q  239 tataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggat 338  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||  |||| ||||| |||||||||| ||||||||  |||| ||||||||||    
T  22498843 tatagatggtatatagtcataaatgacttcgtttataagaaatcgtaaaattgcaattaaaatcgatggattttgtctattttgagattgtactatggat 22498942  T
Q  339 ttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttg 402  Q
    |||||||    ||||||||||||||| ||||||  |||| ||||| |||| ||| |||||||||    
T  22498943 ttgagtcgttcaaggtgaagaaagtcgcaaaattgtggaatttaggattttagttgggattttg 22499006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 3573674 - 3573833
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaa-gggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||||| |||||||||||||||| || |||||||||||||||  || ||||||||||||||||||||||  |||| |||||||||  ||    
T  3573674 aaggttgtcaaaatcgggactttacttcaggtcgaaaagggaatagcaaaatcaggactcgtaaaatcgcaatcaaaatcgtaggaatttactcaactac 3573773  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    | ||||||||| ||| || ||||||||||||| ||||| |||||| |||  |||||||||    
T  3573774 tcttgtagaatagatataagaaattgtaaaatcgcaatcaaaatcgatgagttttaccaa 3573833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 285 - 411
Target Start/End: Original strand, 6943464 - 6943590
Alignment:
Q  285 aaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagt 384  Q
    |||||| |||||||||| |||| ||||| ||||||||  ||||||||||| ||||||||||   |||||||||||||||| |||||||||| |||||||     
T  6943464 aaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatcgatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttagg 6943563  T
Q  385 atttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||||||||||||||    
T  6943564 atttaagtcgggattttgacaacaatg 6943590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 61 - 175
Target Start/End: Complemental strand, 31108504 - 31108390
Alignment:
Q  61 tgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgt 160  Q
    |||||||||| | |||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||| ||||||||| || |||||||||    
T  31108504 tgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaatcgagattcgtaaaaccgcaatcaaaatcaaaagattttactaaaggacttttgt 31108405  T
Q  161 agaatcgatctagga 175  Q
    | ||| ||| |||||    
T  31108404 acaatagatgtagga 31108390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 59 - 186
Target Start/End: Original strand, 27614434 - 27614561
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    |||||||||||  | | |||||||||||||| |||||||||| ||||||| || |||||||||| ||||||||||| ||||||||||||||| |||||      
T  27614434 gttgtcaaaattaggaatttacttcaggtcgaaagggaatagtaaaatcgggactcgtaaaatcacaatcaaaatcgaaggattttactcaatgacttga 27614533  T
Q  159 gtagaatcgatctaggaaattgtaaaat 186  Q
    |||||| | || ||||||||||||||||    
T  27614534 gtagaaacaatataggaaattgtaaaat 27614561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 251 - 407
Target Start/End: Original strand, 2912218 - 2912373
Alignment:
Q  251 atagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggga 350  Q
    ||||||||||||||||| |||||||| ||||||||||||  |||||||||| |||| |||||   ||||||| ||||||||||| ||||||| ||   ||    
T  2912218 atagtcataaatgactttgtttataaaaaatcgtaaaattgcaatcaaaatcgatgaattttgcttattttaagattctactat-gatttgaatcgttga 2912316  T
Q  351 aggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaac 407  Q
    || || |||||||  |||||||||  ||||||  |||||||||||||||||||||||    
T  2912317 agatggagaaagttgcaaaatcctaaattttaagatttaagtcgggattttgacaac 2912373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 27890741 - 27890621
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||| |||  ||||||||||| || | |||||| ||| ||||| |  | ||||||||||| |||||||||  ||||||||||||||| |||    
T  27890741 caaggttgtcaaattcgagactttacttcaagttgaaagggagtagtaaaattggaactcgtaaaatcgtaatcaaaattgaaggattttactcaaggac 27890642  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||||||||||| |||||    
T  27890641 ttttgtagaatcgatatagga 27890621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 117 - 214
Target Start/End: Original strand, 4841665 - 4841762
Alignment:
Q  117 aaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    |||||| |||||||||||||||||||||||||||  |||||||||||||||   || ||||| ||||||| ||||| |||||| ||| ||||||||||    
T  4841665 aaaatcacaatcaaaatcaaaggattttactcaactacttttgtagaatcgggataagaaatcgtaaaatcgcaatcaaaatcgatgtattttaccaa 4841762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 318 - 413
Target Start/End: Original strand, 18491074 - 18491169
Alignment:
Q  318 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    |||| ||||||| |||||||||||||||   ||||||||| ||||   |||||| ||||||||||| ||||||||||||||||||||| |||||||    
T  18491074 ttttgggattctgctatggatttgagtcgttgaaggtgaataaagatgcaaaattctggattttaggatttaagtcgggattttgacagcaatggt 18491169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 331 - 413
Target Start/End: Original strand, 5422798 - 5422880
Alignment:
Q  331 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    |||| ||||||||||   ||||||||| |||||  ||||||| || |||||||||||||||||||||||||||||||||||||    
T  5422798 ctatagatttgagtcgttgaaggtgaataaagttgcaaaatcatgaattttagtatttaagtcgggattttgacaacaatggt 5422880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 80 - 211
Target Start/End: Original strand, 2912060 - 2912191
Alignment:
Q  80 cttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaatt 179  Q
    |||||||| | ||| ||| ||| ||||||| | ||||||||||  |||| ||||  |||||||||||||||  ||||||||||||| | | || ||||||    
T  2912060 cttcaggttgaaagagaagagcgaaatcgataatcgtaaaatcataatcgaaattgaaggattttactcaactacttttgtagaattgttataagaaatt 2912159  T
Q  180 gtaaaatagcaattaaaatcaatggattttac 211  Q
    ||||||| ||||| |||||| | |||||||||    
T  2912160 gtaaaatcgcaatcaaaatcgacggattttac 2912191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 233 - 288
Target Start/End: Original strand, 27614594 - 27614651
Alignment:
Q  233 atatgttataaatggtatatagtcataaatgact--tagtttataagaaatcgtaaaa 288  Q
    |||||||||||||||||||||||||||||||| |  ||||||||||||||||||||||    
T  27614594 atatgttataaatggtatatagtcataaatgaattatagtttataagaaatcgtaaaa 27614651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 94 - 174
Target Start/End: Original strand, 20432406 - 20432486
Alignment:
Q  94 ggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctagg 174  Q
    |||||||||||||||| | |||||||||||||||||||||  ||| |||||||| ||  | ||||||||||||||| ||||    
T  20432406 ggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaattgaagaattttacttaactagttttgtagaatcgatatagg 20432486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 143
Target Start/End: Complemental strand, 21355030 - 21354942
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattt 143  Q
    ||||||||||||||| || | ||||||||| || | |||||||||| ||||||  || |||||||||||||||||||||| | ||||||    
T  21355030 caaggttgtcaaaattgggattttacttcaagttgaaagggaatagaaaaatcaggactcgtaaaatcgcaatcaaaatcgatggattt 21354942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 333 - 408
Target Start/End: Original strand, 3573984 - 3574059
Alignment:
Q  333 atggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 408  Q
    |||||||||||||   |||||||||||||||| | |||| ||||||||||| ||||||||||| ||||||| ||||    
T  3573984 atggatttgagtcgttgaaggtgaagaaagtcgcgaaattctggattttagaatttaagtcggaattttgaaaaca 3574059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 59 - 169
Target Start/End: Original strand, 33583444 - 33583554
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaa-aatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    |||||||||||||| | |||||||| ||||| |||||  |||||| |||||  | ||||||||||  |||||||||| ||| |||||||| || ||||||    
T  33583444 gttgtcaaaatcgggattttacttccggtcgaaaggggttagcaataatcgtaaatcgtaaaatcaaaatcaaaatcgaag-attttacttaaggacttt 33583542  T
Q  158 tgtagaatcgat 169  Q
    ||||||||||||    
T  33583543 tgtagaatcgat 33583554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 383
Target Start/End: Original strand, 18490998 - 18491063
Alignment:
Q  318 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttag 383  Q
    |||||||||||| ||||||||||||||||  ||||||||| |||||  |||||| |||||||||||    
T  18490998 ttttaggattctgctatggatttgagtcattgaaggtgaataaagttgcaaaatgctggattttag 18491063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 33592925 - 33593044
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||| ||||||||||||| | ||| |||||  ||| ||||||||| |||||| || | ||||||||| |||||| ||||| || || |||||||||  ||    
T  33592925 caagattgtcaaaatcgggattttgcttcatatcgaaagggaataacaaaattgaaaatcgtaaaattgcaatcgaaatcgaatga-tttactcaactac 33593023  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||||||| ||| |||||    
T  33593024 ttttgtagaattgatatagga 33593044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 68 - 150
Target Start/End: Complemental strand, 31407651 - 31407569
Alignment:
Q  68 atcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaa 150  Q
    ||||| ||||| ||| |||| | ||||||||| ||||||||| | |  ||||||| |||||||||||||| ||||||||||||    
T  31407651 atcggtactttgctttaggttgaaagggaataacaaaatcgaaaattataaaatcacaatcaaaatcaaaagattttactcaa 31407569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 117 - 166
Target Start/End: Original strand, 8275366 - 8275415
Alignment:
Q  117 aaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatc 166  Q
    ||||||||||| |||||| ||||||||||||||| |||||||||| ||||    
T  8275366 aaaatcgcaattaaaatcgaaggattttactcaaggacttttgtaaaatc 8275415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 645456 - 645417
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  645456 ctaaatatatgttataaattgcatatagtcataaatgact 645417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 59 - 150
Target Start/End: Complemental strand, 23506193 - 23506102
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaa 150  Q
    |||||| |||| || | ||||||| | |||| ||| ||||||||||||||| | | |||||||| |||| |||||| |||||||||| ||||    
T  23506193 gttgtcgaaatggggattttactttaagtcgaaagagaatagcaaaatcgaaaattgtaaaatcacaattaaaatcgaaggattttagtcaa 23506102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 227 - 265
Target Start/End: Original strand, 5422606 - 5422644
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgac 265  Q
    |||||||||||||||||||  ||||||||||||||||||    
T  5422606 ctaaatatatgttataaattatatatagtcataaatgac 5422644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 54 - 108
Target Start/End: Original strand, 8275318 - 8275372
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg 108  Q
    |||||| |||||||||||||| ||| |||| ||| | ||||||||||||||||||    
T  8275318 ccaaggctgtcaaaatcggaattttgcttctggttgaaagggaatagcaaaatcg 8275372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 99 - 133
Target Start/End: Original strand, 18490522 - 18490556
Alignment:
Q  99 agcaaaatcgagattcgtaaaatcgcaatcaaaat 133  Q
    ||||||||||| |||||||||||||||||||||||    
T  18490522 agcaaaatcgaaattcgtaaaatcgcaatcaaaat 18490556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 59 - 166
Target Start/End: Complemental strand, 1179177 - 1179068
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagg-gaatagcaaaatcgagattcgtaaaatcgcaatcaaaatca-aaggattttactcaaagactt 156  Q
    |||||||||||||| | ||| |||||||| | |||| |||| ||||  || | | || |||| ||||||||||||||  |||||||||||||||  ||||    
T  1179177 gttgtcaaaatcgggattttgcttcaggttgaaaggtgaatggcaatttcaaaaatcctaaagtcgcaatcaaaatctgaaggattttactcaactactt 1179078  T
Q  157 ttgtagaatc 166  Q
    ||||||||||    
T  1179077 ttgtagaatc 1179068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 360 - 413
Target Start/End: Original strand, 10958266 - 10958319
Alignment:
Q  360 aagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||| |||||||||| |||||   |||||||||| ||||||||||||||||||    
T  10958266 aagtcgcaaaatcctgaattttgagatttaagtcgcgattttgacaacaatggt 10958319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 117 - 166
Target Start/End: Complemental strand, 20981412 - 20981363
Alignment:
Q  117 aaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatc 166  Q
    ||||||| |||||||||||||| |||||||||||   |||||||||||||    
T  20981412 aaaatcgtaatcaaaatcaaagaattttactcaactgcttttgtagaatc 20981363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 264
Target Start/End: Complemental strand, 27890556 - 27890519
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatga 264  Q
    ||||||||||||||||||| | ||||||||||||||||    
T  27890556 ctaaatatatgttataaattgcatatagtcataaatga 27890519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 198; Significance: 1e-108; HSPs: 29)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 198; E-Value: 1e-108
Query Start/End: Original strand, 57 - 409
Target Start/End: Complemental strand, 18844068 - 18843716
Alignment:
Q  57 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactt 156  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||| || ||||||||||||||||||||||  || ||||||||||| |||||    
T  18844068 aggttgtcaaaatcggaactttacttcaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcggagtattttactcaaggactt 18843969  T
Q  157 ttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtc 256  Q
    |||||||||| || |||||||||||||||| ||||| |||||| |||||||||||| |          ||||||||||||||||||||||||||||| ||    
T  18843968 ttgtagaatccatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatactaaatatatgttataaatggtatataatc 18843869  T
Q  257 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 356  Q
    ||||||||||||||||||||||||||||| |||  |||||||||| |||| ||||| |||||||| ||||||||| |||||||||||||   ||||||||    
T  18843868 ataaatgacttagtttataagaaatcgtataattgcaatcaaaatcgatgaattttgtctattttgggattctacaatggatttgagtcgttgaaggtga 18843769  T
Q  357 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    |||||||| |||||||||| ||| ||| ||||||||||| ||||| |||||||    
T  18843768 agaaagtcgcaaaatcctgaattataggatttaagtcggaattttaacaacaa 18843716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 55 - 410
Target Start/End: Complemental strand, 43235223 - 43234868
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| || ||||||||||  | || |||||||||||||||||   | || ||||||||||||||||||| |||||||||||||||  ||    
T  43235223 caaggttgtcaaaattgggactttacttcgagacgaaagggaatagcaaaatcagtactcataaaatcgcaatcaaaatcgaaggattttactcaagaac 43235124  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| ||  |||||||||||| ||||| |||||| || |||||||||||          || ||| ||||||||||||||||| |||||    
T  43235123 ttttgtagaatcgatataaaaaattgtaaaatcgcaatcaaaatcgattgattttaccaaaagataataatagtaagtatatgttataaatggtttatag 43235024  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
     |||||||||||||||| |||||||||||||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||| ||||   ||||||    
T  43235023 acataaatgacttagttgataagaaatcgtaaaatcacaatcaaaatcgatggatttttcctattttaggattctactatggatttaagtcgttgaaggt 43234924  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||| |||||||||| ||||||| |||||||| |||||||||||||||||    
T  43234923 gaagaaagtcgcaaaatcctgaattttaggatttaagttgggattttgacaacaat 43234868  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 55 - 411
Target Start/End: Original strand, 18051307 - 18051660
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||| ||||||||||| | ||||||| |||||| |||||||||| ||||||| || | ||| |||||||||||||||||||| |||||| | || |||    
T  18051307 caaggtagtcaaaatcgggattttactttaggtcgaaagggaatagaaaaatcgggacttgtagaatcgcaatcaaaatcaaagaattttattgaaggac 18051406  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| |||||||||||||||| ||||  |||||| |||||||| |||||          |||||||||||||||||||||  ||||| |    
T  18051407 ttttgtagaatcgatataggaaattgtaaaatcgcaagcaaaatcgatggatttaaccaaaaaataataatactaaatatatgttataaat--tatat-g 18051503  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    ||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||  ||||||||| |||||||||| ||||||||||   |||| |    
T  18051504 tcataaatgacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggattttgcctattttagaattctactatagatttgagtcgttgaagtt 18051603  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||| |||||||||  ||||||| |||||||||||||||||||||||||||    
T  18051604 gaagaaagtcgcaaaatcctatattttaggatttaagtcgggattttgacaacaatg 18051660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 160; E-Value: 4e-85
Query Start/End: Original strand, 55 - 411
Target Start/End: Complemental strand, 19579299 - 19578941
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaata-gcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||| ||||||||||| | |||||||||||||| |||||| || ||||||| | || || ||||||||||||||||||| |||||||| |||||| ||    
T  19579299 caaggtagtcaaaatcgggattttacttcaggtcgaaagggagtaagcaaaattgggactcataaaatcgcaatcaaaatcgaaggatttcactcaagga 19579200  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn-tactaaatatatgttataaatggtatat 252  Q
    |||||||||||||| | ||| |||||||||||| ||||| |||||| ||||||||||||||           ||| ||||||||||||| ||||||| ||    
T  19579199 cttttgtagaatcgttatagaaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaataataccaaatatatgttatgaatggtaaat 19579100  T
Q  253 agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
    ||||||||||||||||||||||||||||||||||| || |||||||||| ||||||||||   |||||| |||||||||||||||||| ||||   ||||    
T  19579099 agtcataaatgacttagtttataagaaatcgtaaagtcgcaatcaaaatcgatggattttgcttattttgggattctactatggatttaagtcgttgaag 19579000  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||| || |||||||||||||||||  |||||||| || |||||||||||||||    
T  19578999 gtgaagaaaatcgcaaaatcctggattttatgatttaagttggaattttgacaacaatg 19578941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 55 - 409
Target Start/End: Original strand, 23172218 - 23172560
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||||||||||||||||||||| | ||||||||||||||                ||| |||||||||| ||| |||||||||||||||    
T  23172218 caaggttgtcaaaatcggaactttacttcaggttgaaagggaatagcaaa----------------tcgtaatcaaaatcgaagaattttactcaaagac 23172301  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||| ||| |||||||| |          || ||||||||||||| |||||||||||||    
T  23172302 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatgaattttacccaaaaaaattaatattaaatatatgttacaaatggtatatag 23172401  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggat----tttttctattttaggattctactatggatttgagtcaggga 350  Q
    |||||||||||||||||||||| ||||||||||||| | |||||||| ||| |||    ||| |||||||| |||||||||||||||||| ||||   ||    
T  23172402 tcataaatgacttagtttataaaaaatcgtaaaatcgcgatcaaaatcgatcgatgaattttgtctattttgggattctactatggatttaagtcgttga 23172501  T
Q  351 aggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    || ||||||||||| |||||||||  ||||||| |||||||||||||||||||||||||    
T  23172502 agatgaagaaagtcgcaaaatcctaaattttaggatttaagtcgggattttgacaacaa 23172560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 56 - 399
Target Start/End: Original strand, 41688441 - 41688782
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| ||||||||| ||| || |||||||||||||||||| || || ||||||||||| ||||||| |||||||||||| || ||||    
T  41688441 aaggttgtcaaaatcgggactttactttaggacgaaagggaatagcaaaatcgggactcctaaaatcgcaaccaaaatcgaaggattttacttaaggact 41688540  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    |||||||||||||| ||| |||||||||||| ||||| |||||| ||| ||||||||||          ||||||||||||||||| |||||||||||||    
T  41688541 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttaccaa-aaaaaataatactaaatatatgttatgaatggtatatagt 41688639  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
     |||||||| ||||||||||||||||||||||||| |||||||||| |||| |||||   |||||||| ||| ||||||  |||| ||||   |||||||    
T  41688640 tataaatgatttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcttattttagaattttactataaatttaagtcgttgaaggtg 41688739  T
Q  356 aagaaagtcacaaaatcctggattttagtatttaagtcgggatt 399  Q
    |||||| |  |||||||| | ||||||| |||||||| ||||||    
T  41688740 aagaaaattgcaaaatcc-gaattttaggatttaagttgggatt 41688782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 136; E-Value: 9e-71
Query Start/End: Original strand, 56 - 402
Target Start/End: Original strand, 27339962 - 27340307
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||||||||||||||| || | ||||||||||||||||||| | |||| ||||||||||||||||| ||||||||||||||  ||||    
T  27339962 aaggttgtcaaaatcggaactttacttcaagttgaaagggaatagcaaaatcgaaaatcgtgaaatcgcaatcaaaatcgaaggattttactcacggact 27340061  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnnta---ctaaatatatgttataaatggtatat 252  Q
    |||||||||| ||| || |||||  |||||| ||||| |||||| || |||||||| ||          ||   |||||||||||||| |||||||||||    
T  27340062 tttgtagaattgatataagaaatattaaaatcgcaatcaaaatcgatagattttacaaaaaaataataataatactaaatatatgttacaaatggtatat 27340161  T
Q  253 agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
    |||    ||||||||||||||||||||||  |||||||||||||||||| |||| |||||  |||||||| ||||||||||| ||||||||||   ||||    
T  27340162 agt----aatgacttagtttataagaaatattaaaatctcaatcaaaatcgatgaattttgcctattttaagattctactatagatttgagtcgttgaag 27340257  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttg 402  Q
     ||||||||||| ||||||| |  ||||||  ||||||||||||||||||    
T  27340258 atgaagaaagtcgcaaaatcataaattttatgatttaagtcgggattttg 27340307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 56 - 361
Target Start/End: Complemental strand, 20321297 - 20320992
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||||||||| || |||||||||||||||  || ||||||| ||||||| || || ||||||||||||||||||  |||||||||||| || ||||    
T  20321297 aaggttgtcaaaattgggactttacttcaggtcaaaaaggaatagtaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactgaaggact 20321198  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggatttta-ccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||| || |||||||||||||||| ||||| |||||| |||||||||| |||           || ||||||||||||||||||| ||||| |    
T  20321197 tttgtagaatctatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccagaaaaaattaatattaaatatatgttataaatgatatatgg 20321098  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    ||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||||| |||||||| | ||| |||||||||||| |||||  ||||||    
T  20321097 tcataaatgacttagtttataag-aatcgtaaaatcgcaatcaaagttgatgaattttatctattttggaattttactatggattttagtcattgaaggt 20320999  T
Q  355 gaagaaa 361  Q
    |||||||    
T  20320998 gaagaaa 20320992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 103 - 413
Target Start/End: Original strand, 21058978 - 21059287
Alignment:
Q  103 aaatcgagattcgtaaaatcgcaatcaaaatcaaaggatttt-actcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaa 201  Q
    ||||||| | |||||||||||||| ||||||| || |||||| ||| ||  |||||||||||||  || || |||||| |||||| ||||| |||||| |    
T  21058978 aaatcgacaatcgtaaaatcgcaaccaaaatcgaaagatttttacttaactacttttgtagaatttatataagaaattataaaatcgcaatcaaaatcga 21059077  T
Q  202 tggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaat 301  Q
    |||||||||| |||         |||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21059078 tggattttac-aacaaaaaaaaatactaaatatatgttataaatggtttatagtcataaatgacttcgtttataagaaatcgtaaaatcgcaatcaaaat 21059176  T
Q  302 tgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggatttt 401  Q
     |||| |||||  ||||||  ||||||||| |||||||||||||   ||| |||||||||||| ||||||||| |||||||| |||||| ||||||||||    
T  21059177 cgatgaattttgcctatttagggattctac-atggatttgagtcgttgaaagtgaagaaagtcgcaaaatcctagattttaggatttaaatcgggatttt 21059275  T
Q  402 gacaacaatggt 413  Q
    ||||||||||||    
T  21059276 gacaacaatggt 21059287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 55 - 412
Target Start/End: Original strand, 22645501 - 22645850
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||| ||||||||||||||| ||||  |||||||||||||||| |||| ||||||||| |||||||||||| |||||||||||||||||||    
T  22645501 caaggttgtcaaagtcggaactttacttctggtctaaagggaatagcaaaattgagactcgtaaaattgcaatcaaaatcgaaggattttactcaaagac 22645600  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnnt-actaaatatatgttataaatggtatata 253  Q
    || |  |      || ||||||||||||||||  |||| |||||| ||| ||||||||||            |||||| |||||||||    ||||||||    
T  22645601 ttctaca------atataggaaattgtaaaatcacaatcaaaatcgatgaattttaccaaaaaaaaaacaagactaaacatatgttat----ggtatata 22645690  T
Q  254 gtcataaatgac-ttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
    |||||||||||| |||||||||||||||| |||||||| |||||||||| |||||| |||   |||||| ||||| |||||||||||| | ||   ||||    
T  22645691 gtcataaatgacattagtttataagaaattgtaaaatcgcaatcaaaatagatggaatttacttattttgggattttactatggatttaaatcgttgaag 22645790  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatgg 412  Q
    |||||||||||| |||||| ||||||||||| ||||||||||||||||||||||||||||    
T  22645791 gtgaagaaagtcgcaaaatactggattttaggatttaagtcgggattttgacaacaatgg 22645850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 98; E-Value: 4e-48
Query Start/End: Original strand, 118 - 410
Target Start/End: Original strand, 38158101 - 38158383
Alignment:
Q  118 aaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnn 217  Q
    ||||||||| ||||||| |||||||||||||||  | |||||||||||| || || |||||||||||||  |||| |||||  ||||||||||||||       
T  38158101 aaatcgcaaccaaaatcgaaggattttactcaactatttttgtagaatctatgtaagaaattgtaaaatcacaatcaaaattgatggattttaccaa-aa 38158199  T
Q  218 nnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttcta 317  Q
           ||||||||||||||||||         ||||||||||||| ||||||||||||||||||||||||  ||| ||||||  ||||||||| ||||    
T  38158200 aaaataatactaaatatatgttata---------tagtcataaatgatttagtttataagaaatcgtaaaataacaaccaaaatcaatggattttgtcta 38158290  T
Q  318 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||| |||||||||| |||||||||||    ||| || ||||||||| ||||||||| |||||||| ||||||||||| ||||||||||||||    
T  38158291 ttttgggattctactctggatttgagttgttgaaagtcaagaaagtcgcaaaatcctagattttaggatttaagtcggaattttgacaacaat 38158383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 228 - 345
Target Start/End: Complemental strand, 19979781 - 19979664
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggatt 327  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||   | |||| |||||    
T  19979781 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatccatggattttgcgtgttttgggatt 19979682  T
Q  328 ctactatggatttgagtc 345  Q
    |||| ||| |||||||||    
T  19979681 ctaccatgaatttgagtc 19979664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 285 - 410
Target Start/End: Complemental strand, 20923843 - 20923718
Alignment:
Q  285 aaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagt 384  Q
    |||||| |||||||||| |||||| |||  ||||||||||||||||||||||||||  |||   |||||||||||||||| |||||| |||||||||||     
T  20923843 aaaatcgcaatcaaaatcgatggactttgcctattttaggattctactatggatttaggtcgttgaaggtgaagaaagtcgcaaaattctggattttagg 20923744  T
Q  385 atttaagtcgggattttgacaacaat 410  Q
    ||||||||||||||||||||||||||    
T  20923743 atttaagtcgggattttgacaacaat 20923718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 41427774 - 41427654
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||  ||||||||||  |||| |||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||| | |||    
T  41427774 caaggttgtcaaaatcgagactttacttcgagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcgaggac 41427675  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||||||||||| |||||    
T  41427674 ttttgtagaatcgatatagga 41427654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 56 - 165
Target Start/End: Original strand, 15051872 - 15051981
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||| |||||||||| ||||||||||| |||| || ||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||| ||||    
T  15051872 aaggttatcaaaatcgggactttacttcaagtcgaaaaggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 15051971  T
Q  156 tttgtagaat 165  Q
    ||||||||||    
T  15051972 tttgtagaat 15051981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 43005634 - 43005792
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| | ||| ||| || ||| |||| ||||| ||| |||| | | |||||||||||||||||||  || ||||||||||||   ||    
T  43005634 aaggttgtcaaaatcgggattttgctttagatcgaaaggaaatagaaaattcgaaaattgtaaaatcgcaatcaaaattgaaagattttactcaacttct 43005733  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    |||||||||||||| |||||||| ||||||| |||||||||||| ||||||| ||||||    
T  43005734 tttgtagaatcgatataggaaatcgtaaaatcgcaattaaaatcgatggattgtaccaa 43005792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 59 - 311
Target Start/End: Original strand, 19042206 - 19042448
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    |||||||| ||| | ||||| ||  |||||| |||| ||||||||||| | || |||||||||| |||| |||||| ||| |||||||| || |||||||    
T  19042206 gttgtcaatatcaggactttgctctaggtcgaaaggaaatagcaaaatagggactcgtaaaatcacaattaaaatcgaagaattttacttaaggactttt 19042305  T
Q  159 gtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcat 258  Q
    ||||||||||| |||||||||||||||| |||| | ||||  |||||||||| | |          |||||||||||||||| |||| |||||||||||     
T  19042306 gtagaatcgatataggaaattgtaaaatcgcaa-tcaaattgatggattttatccaaaaagattaatactaaatatatgttagaaattgtatatagtca- 19042403  T
Q  259 aaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattt 311  Q
            | |||||||||||||||||||||| |||||||||| ||| |||||    
T  19042404 --------tcgtttataagaaatcgtaaaatcgcaatcaaaatcgatagattt 19042448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 19377957 - 19377844
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||||||| || | ||||||||| | || | ||||||||||||||||||||| ||||||| |  ||||||||||| ||||||||||||||| ||||    
T  19377957 aaggttgtcaaagtcagtactttactttaagtggaaagggaatagcaaaatcgagaatcgtaaatttacaatcaaaatcgaaggattttactcaaggact 19377858  T
Q  156 tttgtagaatcgat 169  Q
    ||||||||||||||    
T  19377857 tttgtagaatcgat 19377844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 54 - 132
Target Start/End: Original strand, 6852339 - 6852417
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaa 132  Q
    ||||||||||||||||||| |||| ||||||||||| |||||||||||||||||| || || |||||| ||||||||||    
T  6852339 ccaaggttgtcaaaatcgggacttcacttcaggtcgaaagggaatagcaaaatcgggactcataaaattgcaatcaaaa 6852417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 84 - 166
Target Start/End: Complemental strand, 24648335 - 24648253
Alignment:
Q  84 aggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatc 166  Q
    |||||| ||||||| || |||||||| | ||||||||||| ||||||||||||||||||||||||||  ||||||||||||||    
T  24648335 aggtcgaaagggaagagtaaaatcgaaaatcgtaaaatcgtaatcaaaatcaaaggattttactcaactacttttgtagaatc 24648253  T

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Target: chr5; HSP #21
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 336 - 408
Target Start/End: Original strand, 19042444 - 19042516
Alignment:
Q  336 gatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 408  Q
    ||||||||||   |||||||||||||||||||||||| |  ||||||| |||||||| |||||||||||||||    
T  19042444 gatttgagtcgttgaaggtgaagaaagtcacaaaatcttaaattttagaatttaagttgggattttgacaaca 19042516  T

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Target: chr5; HSP #22
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 78 - 175
Target Start/End: Original strand, 22984594 - 22984695
Alignment:
Q  78 tacttcaggtcggaagggaatagcaaaatcgagattcgtaaaat----cgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctag 173  Q
    |||||||||| | || |||||||||||||||  | |||||||||     |||||||||||| ||||||||||||||| || ||||||||||||||| |||    
T  22984594 tacttcaggttgaaaaggaatagcaaaatcgtaaatcgtaaaattgcatgcaatcaaaatcgaaggattttactcaaggaattttgtagaatcgatatag 22984693  T
Q  174 ga 175  Q
    ||    
T  22984694 ga 22984695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 266
Target Start/End: Complemental strand, 26021665 - 26021464
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| | ||| ||||||| |  ||||||| |||||||||||        ||||| |||||||||||  ||||||||||||||  |||    
T  26021665 aaggttgtcaaaatcgggattttgcttcaggccaaaagggaagagcaaaatcga--------aaatcacaatcaaaatcgtaggattttactcaactact 26021574  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn-tactaaatatatgttataaatggtatatag 254  Q
    | ||||  |||||| || ||||| |||||||  ||||||||  | ||| ||||||||||           | ||||||||||||||||||| ||||||||    
T  26021573 tgtgtaacatcgatataagaaatcgtaaaatcacaattaaa--cgatgcattttaccaaaacaataataatgctaaatatatgttataaattgtatatag 26021476  T
Q  255 tcataaatgact 266  Q
    ||||||||||||    
T  26021475 tcataaatgact 26021464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 113 - 160
Target Start/End: Complemental strand, 17624898 - 17624851
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgt 160  Q
    ||||||||||||||||||||||||| ||||||||||||  ||||||||    
T  17624898 tcgtaaaatcgcaatcaaaatcaaaagattttactcaactacttttgt 17624851  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 13341471 - 13341591
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg-agattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||||| | ||| |||||  ||| |||||||||| ||||| | | | |||||||||||||| | ||||  ||||| ||||||| |  |    
T  13341471 caaggttgtcaaaatcgggattttgcttcaaatcgaaagggaatagaaaaattgaaaaatcgtaaaatcgcaaacgaaattgaagga-tttactcgacta 13341569  T
Q  154 cttttgtagaatcgatctagga 175  Q
    |||||||||||||||| |||||    
T  13341570 cttttgtagaatcgatatagga 13341591  T

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Target: chr5; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 19377782 - 19377742
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgactta 268  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  19377782 taaatatatgttataaattggatatagtcataaatgactta 19377742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 24648199 - 24648160
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgact 266  Q
    |||||||||| |||||||| ||||||||||||||||||||    
T  24648199 ctaaatatatattataaattgtatatagtcataaatgact 24648160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 15446447 - 15446410
Alignment:
Q  97 atagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  15446447 atagcaaaatcgaaactcgtaaaatcgcaatcaaaatc 15446410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 41427588 - 41427548
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgactta 268  Q
    ||||||||| |||||||| | ||||||||||||||||||||    
T  41427588 taaatatatattataaattgcatatagtcataaatgactta 41427548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 191; Significance: 1e-103; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 191; E-Value: 1e-103
Query Start/End: Original strand, 55 - 411
Target Start/End: Original strand, 31237750 - 31238107
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||| ||||||||||| | |||||||||||| ||  |||||||||| ||||||| || |||||||||||||||||| ||| ||||||||||||||| |||    
T  31237750 caagattgtcaaaatcaggactttacttcagttcaaaagggaatagtaaaatcgggactcgtaaaatcgcaatcaatatcgaaggattttactcaaggac 31237849  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntac-taaatatatgttataaatggtatata 253  Q
    ||||||| ||||||| ||| |||||||||||| ||||| |||||| ||||||||||||||          ||| | ||||||||||||||||||||||||    
T  31237850 ttttgtaaaatcgatatagaaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaataataatacatgaatatatgttataaatggtatata 31237949  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
     |||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||| |||||||| |||||||||||| |||||||||   |||||    
T  31237950 atcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggatttttcctattttaagattctactatgaatttgagtcgttgaagg 31238049  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||  ||||||||| |||||||| |||||||||||||||||||||||||||    
T  31238050 tgaagaaagtggcaaaatcctagattttaggatttaagtcgggattttgacaacaatg 31238107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 173; E-Value: 8e-93
Query Start/End: Original strand, 56 - 411
Target Start/End: Complemental strand, 1405137 - 1404782
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||  |||||| || |||||  ||||||||||||||||||  | || ||||||||||||||||||| |||||||||||||||  |||    
T  1405137 aaggttgtcaaaatcgagactttaatttaggtcaaaagggaatagcaaaatcggtactcataaaatcgcaatcaaaatcgaaggattttactcaagaact 1405038  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    |||||||||||||| |||||||||||||||| ||||| |||||| |||||||| |  ||          | |||| ||||||||||||||||| ||||||    
T  1405037 tttgtagaatcgatataggaaattgtaaaattgcaatcaaaatcgatggatttaaaaaaataataatattcctaagtatatgttataaatggtgtatagt 1404938  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||   || ||||||||||||| |||||||| ||||   |||||||    
T  1404937 cataaatgacttagtatataagaaatcgtaaaatcacaatcaaaatcgatggattttgcatagtttaggattctacaatggatttaagtcgttgaaggtg 1404838  T
Q  356 aagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||||||  ||||||| |||||||||||||||||||||||||||    
T  1404837 aagaaagtcacaaaatcctaaattttagaatttaagtcgggattttgacaacaatg 1404782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 54 - 411
Target Start/End: Complemental strand, 20064079 - 20063713
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||||||  ||||||||||||| | ||||||||||||||||||||| |||||||||||||||||||||| ||| ||||||||||| ||    
T  20064079 ccaaggttgtcaaaatcggggctttacttcaggttgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaagaattttactcaagga 20063980  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc---------aacnnnnnnnnntactaaatatatgttataaa 244  Q
    |||||||||||||||| |||||||||||||||| ||||  |||||| ||||||||||||         ||           | |||||| |||| |||||    
T  20063979 cttttgtagaatcgatataggaaattgtaaaatcgcaaccaaaatcgatggattttaccaaaaaaaataaaataaataataaataaatacatgtgataaa 20063880  T
Q  245 tggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagt 344  Q
    ||||||| |||||||||||| |||||| |||||||| ||||||||| |||| ||||| |||| |||||  ||||||| |||||||||||||||||| |||    
T  20063879 tggtatacagtcataaatgaattagttcataagaaaacgtaaaatcgcaattaaaatcgatgaattttgcctattttgggattctactatggatttaagt 20063780  T
Q  345 cagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |   |||| ||||||||  | ||||| | ||||||||||  ||||||||||||||||||||||||||    
T  20063779 ccttgaagatgaagaaaaccgcaaaaccttggattttaggttttaagtcgggattttgacaacaatg 20063713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 82 - 409
Target Start/End: Original strand, 35565755 - 35566082
Alignment:
Q  82 tcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggatttta---ctcaaagacttttgtagaatcgatctaggaaat 178  Q
    |||||||| | | ||| ||||||||||| | | ||||||||||||  |||||| ||||||||||   |||||  ||||||||||||||||| || |||||    
T  35565755 tcaggtcgaaggagaagagcaaaatcgataattgtaaaatcgcaactaaaatcgaaggattttattactcaactacttttgtagaatcgatataagaaat 35565854  T
Q  179 tgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataaga 278  Q
      ||||||  |||| |||||| ||||||||||||||          ||||||||||||||||||||| ||||||||||||||||||||| ||||||||||    
T  35565855 cataaaatcacaatcaaaatcgatggattttaccaa---aaaaaaatactaaatatatgttataaattgtatatagtcataaatgactttgtttataaga 35565951  T
Q  279 aatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggat 378  Q
    ||||||||||   |||||||||| ||||||||||  ||||||| ||||||||| ||||||||||||||  |||  ||||||||||| |||||||||| ||    
T  35565952 aatcgtaaaactgcaatcaaaatcgatggattttgcctattttgggattctaccatggatttgagtcattgaatatgaagaaagtcgcaaaatcctgaat 35566051  T
Q  379 tttagtatttaagtcgggattttgacaacaa 409  Q
    |||   |||||||| ||||||||||||||||    
T  35566052 tttgtgatttaagttgggattttgacaacaa 35566082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 113 - 411
Target Start/End: Complemental strand, 36430145 - 36429847
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    |||||||||||||||||||||| |||||| ||||||||  | |||||||||||||||  |  |||   |||||| ||||| |||||| ||||||||||||    
T  36430145 tcgtaaaatcgcaatcaaaatcgaaggatattactcaataatttttgtagaatcgataaaaaaaaaattaaaattgcaatcaaaatcgatggattttacc 36430046  T
Q  213 aacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
     |          |||||||||||||||| ||||| ||||||||||||||| |||||||||||||||||||||| |||| |||||||||| ||||||||||    
T  36430045 taaaaaaaaaaatactaaatatatgttagaaatgatatatagtcataaattacttagtttataagaaatcgtacaatcgcaatcaaaatcgatggatttt 36429946  T
Q  313 ttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
      |||||||  |||||| ||||| | |||||||   |||||||||||||||| ||||||||| |||| ||| |||||||| ||||||||||||||||||    
T  36429945 gcctattttgagattctcctatgaacttgagtcgttgaaggtgaagaaagtcgcaaaatcctagattataggatttaagttgggattttgacaacaatg 36429847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 110; E-Value: 3e-55
Query Start/End: Original strand, 80 - 411
Target Start/End: Original strand, 15588654 - 15588979
Alignment:
Q  80 cttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaatt 179  Q
    |||||||||| ||| ||| || |||||||| | || ||||||||||| ||||||| |||||||||||||||  ||||  |||| |||||| || ||||||    
T  15588654 cttcaggtcgaaagagaaaagaaaaatcgacaatcataaaatcgcaaccaaaatcgaaggattttactcaattacttc-gtaggatcgatataagaaatt 15588752  T
Q  180 gtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaa 279  Q
     |||||| ||||| |||||| ||||||||||||||          |||||||||||||  |||||||||||||| ||||||||||||||||||||| |||    
T  15588753 ataaaatcgcaatcaaaatcgatggattttaccaa--aaaaataatactaaatatatg--ataaatggtatataatcataaatgacttagtttatatgaa 15588848  T
Q  280 atcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggatt 379  Q
    ||||||||||| |||| ||||  ||| |||||| ||||||||  |||||||||||| ||||||||    |||||||||||||| | |||||||||| |||    
T  15588849 atcgtaaaatcgcaataaaaaacgattgattttgtctattttgagattctactatgtatttgagttgttgaaggtgaagaaagacgcaaaatcctgaatt 15588948  T
Q  380 ttagtatttaagtcgggattttgacaacaatg 411  Q
    |||  | ||||||||||||||||||| |||||    
T  15588949 ttaaga-ttaagtcgggattttgacagcaatg 15588979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 108; E-Value: 5e-54
Query Start/End: Original strand, 236 - 411
Target Start/End: Complemental strand, 30432593 - 30432418
Alignment:
Q  236 tgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatg 335  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||  |||||||||| |||||||||| ||||||||  ||||||||||||    
T  30432593 tgttataaatggtatatagtaataaatgacttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctattttgagattctactatg 30432494  T
Q  336 gatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||   ||||| ||||||||||  |||||||| |||||||| |||||| || |||||||||||||||||    
T  30432493 gatttgagtcgttgaaggcgaagaaagtcgaaaaatcctagattttagaatttaaatcaggattttgacaacaatg 30432418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 104; E-Value: 1e-51
Query Start/End: Original strand, 225 - 408
Target Start/End: Complemental strand, 31578189 - 31578007
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagg 324  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||  |||||||||||||||||||||   |||||||||    
T  31578189 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataataaatcgtaaaattgcaatcaaaattgatggattttgcttattttagg 31578090  T
Q  325 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 408  Q
    ||||||||| |||||| | ||   ||||||||||||| || ||||||| |  ||||||  ||||||||||||||||||||||||    
T  31578089 attctacta-ggatttaaatcgttgaaggtgaagaaaatcgcaaaatcttaaattttaacatttaagtcgggattttgacaaca 31578007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 55 - 250
Target Start/End: Original strand, 19262090 - 19262285
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||| ||||||||||||||||||| |||| | |||||||||||||||| || |||||||||||||||||||||| || |||||||||||| |||    
T  19262090 caaggttgtcgaaatcggaactttacttcaagtcgaatgggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaagattttactcaaggac 19262189  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtat 250  Q
    ||||||||||||||| || ||||||||||||| ||||| |||||| | ||| ||||||||          |||||| |||||||||||||||||||    
T  19262190 ttttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgacggactttaccaaaaaataataatactaactatatgttataaatggtat 19262285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 56 - 273
Target Start/End: Original strand, 25538920 - 25539138
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| ||||||| |||||||| |||||||||| ||||||| |  ||||||||||||||||||||| ||||||||||||| ||  |||    
T  25538920 aaggttgtcaaaatcggtactttacatcaggtcgaaagggaatagaaaaatcgggtctcgtaaaatcgcaatcaaaattaaaggattttactgaactact 25539019  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc-aacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    |||||||||||||| ||  |||||||||||| ||||| |||||| || ||||||||| ||          | |||||||||||||||| || ||||||||    
T  25539020 tttgtagaatcgatataaaaaattgtaaaattgcaatcaaaatcgatagattttaccaaaacagaaataatgctaaatatatgttatatattgtatatag 25539119  T
Q  255 tcataaatgacttagttta 273  Q
    |||||||||||| ||||||    
T  25539120 tcataaatgactcagttta 25539138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 212
Target Start/End: Complemental strand, 30433169 - 30433013
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| || ||||||||||||| || | ||||| ||||||| || || ||||||||||||||||||| || |||||||||||| ||||    
T  30433169 aaggttgtcaaaatcgggacattacttcaggtcgaaaagcaatagaaaaatcgggactcataaaatcgcaatcaaaatcgaatgattttactcaaggact 30433070  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    ||| |||||||||| |||||||||||||||| ||||| |||||  ||||||||||||    
T  30433069 tttatagaatcgatataggaaattgtaaaatcgcaatcaaaatagatggattttacc 30433013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 54 - 169
Target Start/End: Original strand, 20033995 - 20034110
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||| ||| |||||||||| ||||||||||| |||| |||||| |||||||||||||| |||||||||||||||||||||  ||||||||||||||| ||    
T  20033995 ccaaagttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaattgaaggattttactcaagga 20034094  T
Q  154 cttttgtagaatcgat 169  Q
    ||||||||||||||||    
T  20034095 cttttgtagaatcgat 20034110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 66 - 175
Target Start/End: Original strand, 27523881 - 27523990
Alignment:
Q  66 aaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaat 165  Q
    ||||||| ||||||||||| |||| |||||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||| ||||||||||||||    
T  27523881 aaatcgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtagaat 27523980  T
Q  166 cgatctagga 175  Q
    |||| |||||    
T  27523981 cgatgtagga 27523990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 53 - 175
Target Start/End: Complemental strand, 974696 - 974573
Alignment:
Q  53 cccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg-agattcgtaaaatcgcaatcaaaatcaaaggattttactcaaa 151  Q
    ||||||||| |||| ||||| ||||||||||| |||| |||||| ||||||||||| | | |||||||||||||||||||||| |||||||||||||||     
T  974696 cccaaggttatcaatatcgggactttacttcaagtcgaaagggagtagcaaaatcggaaactcgtaaaatcgcaatcaaaatcgaaggattttactcaag 974597  T
Q  152 gacttttgtagaatcgatctagga 175  Q
    |||||||||||||||||| |||||    
T  974596 gacttttgtagaatcgatatagga 974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 21869095 - 21869209
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||| ||||||||||| ||||||||||| |||| |||||||||| ||||||| || || |||||||||||| |||||| |||||||||| |||| |||    
T  21869095 caaggtcgtcaaaatcgggactttacttcaagtcgaaagggaatagaaaaatcgggactcttaaaatcgcaattaaaatcgaaggattttattcaatgac 21869194  T
Q  155 ttttgtagaatcgat 169  Q
    |||||||||||||||    
T  21869195 ttttgtagaatcgat 21869209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 281 - 411
Target Start/End: Original strand, 23863321 - 23863451
Alignment:
Q  281 tcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattt 380  Q
    |||||||||| ||| |||||| ||||||||||  |||||||  ||||||||||||||||| ||||   ||| |||||||||||| |||||| || |||||    
T  23863321 tcgtaaaatcgcaaccaaaatcgatggattttgcctattttgagattctactatggatttcagtcgttgaaagtgaagaaagtcgcaaaattctcgattt 23863420  T
Q  381 tagtatttaagtcgggattttgacaacaatg 411  Q
    ||| |||||||||||||||||||||||||||    
T  23863421 tagaatttaagtcgggattttgacaacaatg 23863451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 19245944 - 19245824
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| | ||| ||||| || | ||||||||||||||||| | | |||||||||||||||||||||| |||||||||||| ||  ||    
T  19245944 caaggttgtcaaaatcgggattttgcttcaagttgaaagggaatagcaaaatcaaaaatcgtaaaatcgcaatcaaaatctaaggattttacttaactac 19245845  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||||||||||| |||||    
T  19245844 ttttgtagaatcgatatagga 19245824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 119 - 301
Target Start/End: Original strand, 1690566 - 1690748
Alignment:
Q  119 aatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnn 218  Q
    |||||||| ||||| | ||||| |||||| ||  ||||||||  ||||||| || ||| | ||||||| ||||| |||||| ||  ||||||||||        
T  1690566 aatcgcaaccaaaagcgaaggaatttactgaactacttttgttaaatcgatataagaattcgtaaaatcgcaatcaaaatcgataaattttaccaaaaaa 1690665  T
Q  219 nnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaat 301  Q
          || ||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||    
T  1690666 taataatattaaatatattttataaatggtatatagtcataaaagacttagtttataagaaatcgtaaaatcgcaatcaaaat 1690748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 7302138 - 7302023
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||| |||||||||| ||||||||||| || | | |||  ||||||||||| || ||||||||| |||||||||||| ||||||||||||||| ||    
T  7302138 ccaaggttatcaaaatcgggactttacttcaagttgaaggggggtagcaaaatcgggactcgtaaaattgcaatcaaaatcgaaggattttactcaagga 7302039  T
Q  154 cttttgtagaatcgat 169  Q
    ||||||||||||||||    
T  7302038 cttttgtagaatcgat 7302023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 56 - 273
Target Start/End: Complemental strand, 16767140 - 16766922
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagat-tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||| |||| || |||| ||| |||||||||  || |||| ||||||||||| |  || ||||||||||||||||||  |||||||||||||||  ||    
T  16767140 aaggttttcaacattggaattttgcttcaggtcaaaaaggaagagcaaaatcgaaaaatcataaaatcgcaatcaaaattgaaggattttactcaactac 16767041  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    |||| |||||||||| || ||||| ||||||| ||||| |||||||| ||||||  | ||          | |||||||| |||||||||| ||||| ||    
T  16767040 ttttatagaatcgatataagaaatcgtaaaatcgcaatcaaaatcaaaggatttaccaaaacaaaaataatgctaaatatttgttataaattgtatacag 16766941  T
Q  255 tcataaatgacttagttta 273  Q
    |||||||||||| ||||||    
T  16766940 tcataaatgactcagttta 16766922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 315 - 412
Target Start/End: Original strand, 1690796 - 1690893
Alignment:
Q  315 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatgg 412  Q
    ||||||| ||||| |||||||||| ||||||   ||||||||||||||||||||||||||  ||||||  |||||||||||  |||||||||||||||    
T  1690796 ctattttgggattttactatggatctgagtcgtcgaaggtgaagaaagtcacaaaatcctaaattttaagatttaagtcggagttttgacaacaatgg 1690893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 284 - 410
Target Start/End: Complemental strand, 19491982 - 19491855
Alignment:
Q  284 taaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattt--t 381  Q
    ||||||| |||||||||| ||||||||||  ||||||| ||||||| |||||||||||||||    ||| ||||||||||| ||||||||| |||||  |    
T  19491982 taaaatcgcaatcaaaatcgatggattttacctatttt-ggattctgctatggatttgagtcgtttaagatgaagaaagtcgcaaaatcctagattttat 19491884  T
Q  382 agtatttaagtcgggattttgacaacaat 410  Q
    || |||||| ||| |||||||||||||||    
T  19491883 aggatttaattcgagattttgacaacaat 19491855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 91 - 175
Target Start/End: Complemental strand, 34578208 - 34578124
Alignment:
Q  91 aagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctagga 175  Q
    |||||| ||||||||||| || || ||||||||||||||||||  ||||||||||||||  |||||||||||||||||| |||||    
T  34578208 aagggagtagcaaaatcgggactcataaaatcgcaatcaaaattgaaggattttactcatggacttttgtagaatcgatgtagga 34578124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 91 - 214
Target Start/End: Original strand, 13502483 - 13502606
Alignment:
Q  91 aagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagca 190  Q
    ||||||| || |||||||| | ||||||||||| |||||||||  |||||| ||| ||||  | |||||||||||| || || ||||| ||||||| |||    
T  13502483 aagggaagagtaaaatcgaaaatcgtaaaatcgtaatcaaaattgaaggatattagtcaactatttttgtagaatctatataagaaatcgtaaaatcgca 13502582  T
Q  191 attaaaatcaatggattttaccaa 214  Q
    || |||||| ||||||||||||||    
T  13502583 atcaaaatcgatggattttaccaa 13502606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 56 - 166
Target Start/End: Complemental strand, 8428576 - 8428466
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| | ||| ||| |||||| |||||||||| |||||| | | |  ||||||||||||||||||| ||||||||| |||||  | |    
T  8428576 aaggttgtcaaaatcgggattttgctttaggtcgaaagggaatagaaaaatcaaaaattctaaaatcgcaatcaaaatcgaaggattttgctcaactatt 8428477  T
Q  156 tttgtagaatc 166  Q
    |||||||||||    
T  8428476 tttgtagaatc 8428466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 277 - 408
Target Start/End: Original strand, 25539222 - 25539353
Alignment:
Q  277 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 376  Q
    |||||||| ||||| || ||||||| ||||||||||   |||||| ||||||| |||||||||| ||||   ||||||||||||| |  |||| || ||     
T  25539222 gaaatcgttaaatcgcagtcaaaatcgatggattttgcttattttcggattctcctatggatttaagtcgttgaaggtgaagaaaattgcaaattcttga 25539321  T
Q  377 attttagtatttaagtcgggattttgacaaca 408  Q
    ||||||| |||||| |||||||||| ||||||    
T  25539322 attttaggatttaaatcgggattttaacaaca 25539353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 305 - 411
Target Start/End: Complemental strand, 15266187 - 15266081
Alignment:
Q  305 tggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgac 404  Q
    ||||||||| ||||||| | ||| ||  |||||||||| |||  |||| |||| ||||| ||||||||||| ||||||| |||||| ||  |||||||||    
T  15266187 tggatttttcctattttggaattataacatggatttgaatcattgaagatgaataaagttacaaaatcctgaattttaggatttaaatcatgattttgac 15266088  T
Q  405 aacaatg 411  Q
    |||||||    
T  15266087 aacaatg 15266081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 113 - 214
Target Start/End: Complemental strand, 27407088 - 27406987
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    |||||| ||||||||||||||| ||| |||||||||||  ||||||| | |||| || || |||||  |||||| ||||| |||||  |||||||| |||    
T  27407088 tcgtaatatcgcaatcaaaatccaagaattttactcaactacttttggataatcaatataagaaatcataaaatcgcaatcaaaattgatggatttcacc 27406989  T
Q  213 aa 214  Q
    ||    
T  27406988 aa 27406987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 228 - 273
Target Start/End: Complemental strand, 34841762 - 34841717
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgacttagttta 273  Q
    |||||||||||||||||| |||||||||||||||| ||| ||||||    
T  34841762 taaatatatgttataaattgtatatagtcataaataactcagttta 34841717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 268
Target Start/End: Complemental strand, 974507 - 974467
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgactta 268  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  974507 taaatatatgttataaattgcatatagtcataaatgactta 974467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 13502561 - 13502601
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  13502561 tataagaaatcgtaaaatcgcaatcaaaatcgatggatttt 13502601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 367 - 411
Target Start/End: Complemental strand, 19245196 - 19245152
Alignment:
Q  367 aaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||| ||||||  |||||||||||||||||||||||||||    
T  19245196 aaaatcctgaattttaaaatttaagtcgggattttgacaacaatg 19245152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 91 - 150
Target Start/End: Complemental strand, 34167608 - 34167548
Alignment:
Q  91 aagggaatagcaaaatcgagattcgtaaaatcgcaatc-aaaatcaaaggattttactcaa 150  Q
    ||||||||||||||||||| | |||||||||||||||| || ||| || ||||||||||||    
T  34167608 aagggaatagcaaaatcgaaaatcgtaaaatcgcaatctaacatcgaatgattttactcaa 34167548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 262
Target Start/End: Complemental strand, 19492114 - 19492079
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaat 262  Q
    ||||||||||||||||||| ||||||||||||||||    
T  19492114 ctaaatatatgttataaattgtatatagtcataaat 19492079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 272 - 311
Target Start/End: Complemental strand, 27407032 - 27406993
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggattt 311  Q
    ||||||||||| ||||||| ||||||||||||||||||||    
T  27407032 tataagaaatcataaaatcgcaatcaaaattgatggattt 27406993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 315 - 374
Target Start/End: Complemental strand, 31023318 - 31023259
Alignment:
Q  315 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcct 374  Q
    ||||||||||||||||||||| |||||||||   ||| ||||| |||||| |||||||||    
T  31023318 ctattttaggattctactatgaatttgagtcgttgaaagtgaataaagtcgcaaaatcct 31023259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Complemental strand, 41002195 - 41002156
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  41002195 ctaaatatatgttataaattgcatatagtcataaatgact 41002156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 315 - 413
Target Start/End: Original strand, 5395682 - 5395780
Alignment:
Q  315 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    |||||||  |||||| ||||||||||||||||   ||| |||| |||||| |||||||||  ||||||  ||||| |||   |||||||||||||||||    
T  5395682 ctattttgagattctgctatggatttgagtcatttaagatgaataaagtcgcaaaatcctatattttatgatttaggtcaaaattttgacaacaatggt 5395780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 316 - 410
Target Start/End: Complemental strand, 16766804 - 16766710
Alignment:
Q  316 tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||||||| |||||||||||| ||   ||||||||| ||| ||  ||||||||  ||||||  |||||||||   ||||||||||||||    
T  16766804 tattttaggattctgctatggatttgattcgttgaaggtgaataaaatcgtaaaatcctaaattttaagatttaagtcaaaattttgacaacaat 16766710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 26251696 - 26251658
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgact 266  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  26251696 taaatatatgttataaattgcatatagtcataaatgact 26251658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 116 - 149
Target Start/End: Complemental strand, 9324030 - 9323997
Alignment:
Q  116 taaaatcgcaatcaaaatcaaaggattttactca 149  Q
    ||||||||||||||||||||||||||| ||||||    
T  9324030 taaaatcgcaatcaaaatcaaaggattctactca 9323997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 350 - 411
Target Start/End: Complemental strand, 15627715 - 15627654
Alignment:
Q  350 aaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||| |||  ||||||||| |  ||||||| |||||||||||||||||||||| ||||    
T  15627715 aaggtgaataaaaccacaaaatcataaattttaggatttaagtcgggattttgacaataatg 15627654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Original strand, 21869215 - 21869252
Alignment:
Q  97 atagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    ||||||||||||||| |||||||||| |||||||||||    
T  21869215 atagcaaaatcgagactcgtaaaatcccaatcaaaatc 21869252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 21869280 - 21869321
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgactta 268  Q
    ||||||||||||||||||| | |||||||||||||| |||||    
T  21869280 ctaaatatatgttataaattgcatatagtcataaataactta 21869321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 55 - 168
Target Start/End: Original strand, 27749283 - 27749396
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||| ||||||||||| | | |||||||||| ||| |||| | ||| |||||    | |||||||||||||||| ||||  || || ||||||||| ||     
T  27749283 caagtttgtcaaaatcagtattttacttcagatcgaaaggaattagtaaaatgacaaatcgtaaaatcgcaatctaaattgaatgagtttactcaaggat 27749382  T
Q  155 ttttgtagaatcga 168  Q
    ||||||||||||||    
T  27749383 ttttgtagaatcga 27749396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 365 - 410
Target Start/End: Complemental strand, 29660938 - 29660893
Alignment:
Q  365 acaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||| |||||||| |||||||||||  |||||||||||||    
T  29660938 acaaaatcctagattttaggatttaagtcggatttttgacaacaat 29660893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 97 - 134
Target Start/End: Complemental strand, 34578124 - 34578087
Alignment:
Q  97 atagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    |||||||||||| || ||||||||||||||||||||||    
T  34578124 atagcaaaatcgggactcgtaaaatcgcaatcaaaatc 34578087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 233 - 265
Target Start/End: Original strand, 5395475 - 5395507
Alignment:
Q  233 atatgttataaatggtatatagtcataaatgac 265  Q
    ||||||||||||| |||||||||||||||||||    
T  5395475 atatgttataaattgtatatagtcataaatgac 5395507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 56 - 147
Target Start/End: Complemental strand, 16767277 - 16767185
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagat-tcgtaaaatcgcaatcaaaatcaaaggattttact 147  Q
    |||||| |||| || |||| ||| |||||||||  || |||| ||||||||||| |  || ||||||||||||||||||  ||||||||||||    
T  16767277 aaggttttcaacattggaattttgcttcaggtcaaaaaggaagagcaaaatcgaaaaatcataaaatcgcaatcaaaattgaaggattttact 16767185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 80 - 144
Target Start/End: Original strand, 23863288 - 23863352
Alignment:
Q  80 cttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggatttt 144  Q
    ||||| |||| ||| ||| ||||||||| | |||||||||||||||| ||||||| | |||||||    
T  23863288 cttcaagtcgaaagagaaaagcaaaatcaacattcgtaaaatcgcaaccaaaatcgatggatttt 23863352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 41)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 58 - 413
Target Start/End: Complemental strand, 5922400 - 5922046
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    ||||||||||||||| |||||||||||||||| |||||||||||||||||   |   ||| |||||||||||||||| |||||||||||||||  |||||    
T  5922400 ggttgtcaaaatcgggactttacttcaggtcgaaagggaatagcaaaatcagaacatgtacaatcgcaatcaaaatcgaaggattttactcaagaacttt 5922301  T
Q  158 tgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtca 257  Q
    |||||||||||| |||||||||||||||| |||||  || || |||||||||||| |          ||||||||||||||||| |||||||||||||||    
T  5922300 tgtagaatcgatataggaaattgtaaaatcgcaatctaa-tcgatggattttacccaaaaaatttaatactaaatatatgttatgaatggtatatagtca 5922202  T
Q  258 taaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaa 357  Q
    |||||||| || |||||||||||||| |||||| |||||||||| |||||||||| |||||||| |||||||||||||||| | ||||   |||||||||    
T  5922201 taaatgacctaatttataagaaatcgcaaaatcgcaatcaaaatcgatggattttgtctattttgggattctactatggatataagtcgttgaaggtgaa 5922102  T
Q  358 gaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  5922101 gaaagtcacaaaatcctggattttaggatttaagtcgggattttgacaacaatggt 5922046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 54 - 411
Target Start/End: Complemental strand, 11879956 - 11879599
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||| | |||||||||||||  |||||||||| |||||||  | |||||||||||||||||||||| |||||||||||  ||  |    
T  11879956 ccaaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaa 11879857  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    ||||| |||||||||| ||| |||||||||||| ||| | |||||| ||||||||||||||          |||||||||||||||||||||||||||||    
T  11879856 cttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatata 11879757  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||| ||||||||||   ||| |    
T  11879756 gtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaag 11879657  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||  |||||||||| ||||||| ||||||||| | |||||||||||||||    
T  11879656 tgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11879599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 54 - 411
Target Start/End: Complemental strand, 11897372 - 11897015
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||| | |||||||||||||  |||||||||| |||||||  | |||||||||||||||||||||| |||||||||||  ||  |    
T  11897372 ccaaggttgtcaaaatcgggattttacttcaggtcaaaagggaatagtaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttacctaagaa 11897273  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    ||||| |||||||||| ||| |||||||||||| ||| | |||||| ||||||||||||||          |||||||||||||||||||||||||||||    
T  11897272 cttttatagaatcgatatagaaaattgtaaaatcgcattcaaaatcgatggattttaccaaaaaataataatactaaatatatgttataaatggtatata 11897173  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    ||||||||| ||||||||||||||||||||||||||| |||||||||| |||| |||||| |||||||||||||||||||| ||||||||||   ||| |    
T  11897172 gtcataaattacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaatttttcctattttaggattctactatagatttgagtcgttgaaag 11897073  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||  |||||||||| ||||||| ||||||||| | |||||||||||||||    
T  11897072 tgaagaaagttgcaaaatcctgaattttaggatttaagtcagaattttgacaacaatg 11897015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 60 - 410
Target Start/End: Complemental strand, 45403379 - 45403029
Alignment:
Q  60 ttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttg 159  Q
    ||||||||||||| |||||| |||| |||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||| |||||||||||    
T  45403379 ttgtcaaaatcgggactttatttcacgtcgaaagggaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttacttaaagacttttg 45403280  T
Q  160 tagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc-aacnnnnnnnnntactaaatatatgttataaatggtatatagtcat 258  Q
    |||||||||| |||||||||||||||  ||||| |||||| || ||||||||| ||          || |||||||||||||||||||||||||  ||||    
T  45403279 tagaatcgatataggaaattgtaaaa-cgcaatcaaaatcgatagattttaccaaaaaaataataatattaaatatatgttataaatggtatattatcat 45403181  T
Q  259 aaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaag 358  Q
    ||||||||| ||| ||||| |||||||||||| |||||||||| ||||||||||   ||||||  |||||| |||||||||| ||||   |||||| |||    
T  45403180 aaatgacttggttgataaggaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgagattcttctatggatttaagtcgttgaaggtcaag 45403081  T
Q  359 aaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||| ||||||| |||||||||| |||||||||| |||||||||||||||    
T  45403080 aaagtcgcaaaatcttggattttagaatttaagtcgcgattttgacaacaat 45403029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 56 - 345
Target Start/End: Complemental strand, 23142528 - 23142240
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||| | |||||| ||||  ||| ||||||||||||||| ||  | |||||||||||||||  ||||| || ||||||| ||||| |||    
T  23142528 aaggttgtcaaaatcaggactttatttcaattcgaaagggaatagcaaaaccggtaatcgtaaaatcgcaatttaaatcgaatgattttagtcaaaaact 23142429  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    |||||||||||||| || ||||||||||||| ||||| |||||| ||||| ||||||||          |||||||||||||||||||||||||||||||    
T  23142428 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggactttaccaa-aaataataatactaaatatatgttataaatggtatatagt 23142330  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtc 345  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||| |||| |||||  |||||||||||||||||||||||||| ||||    
T  23142329 cataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttaggattctactatggatttcagtc 23142240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 76 - 408
Target Start/End: Original strand, 19704252 - 19704583
Alignment:
Q  76 tttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctagga 175  Q
    ||||||||| |||  |||||||||||||||||| || |||||||||||||||||||||||||||| ||||||||| |||| ||||||||||||| |  ||    
T  19704252 tttacttcaagtccaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggaatttactcaaggactgttgtagaatcgatatttga 19704351  T
Q  176 aattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttata 275  Q
    |||  ||||||  |||| |||||| |||||||||||| |           ||||||||||||||| ||||||||||||||||||||| |||| |||||||    
T  19704352 aatcttaaaatcacaatcaaaatcgatggattttacctaaaaaaaaaa--actaaatatatgttacaaatggtatatagtcataaataacttggtttata 19704449  T
Q  276 agaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcc-t 374  Q
    ||||||||||||||  |||||||||| ||||||||||  ||||| | | |||||||||||||||||||||   |||||||||||||||| ||||| || |    
T  19704450 agaaatcgtaaaattgcaatcaaaatcgatggattttgcctattatggaattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaaacctt 19704549  T
Q  375 ggattttagtatttaagtcgggattttgacaaca 408  Q
    | ||||||  |||||||| |||||||||||||||    
T  19704550 gaattttaagatttaagttgggattttgacaaca 19704583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 102 - 408
Target Start/End: Complemental strand, 15294977 - 15294672
Alignment:
Q  102 aaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaa 201  Q
    ||||||| || || ||||||||||||||||||| |||||||||||||||  |||||||||||||| || || |||||  |||||| ||||  |||||| |    
T  15294977 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15294878  T
Q  202 tggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaat 301  Q
    ||||||||||| |          |||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  15294877 tggattttaccta-aaaaaataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaat 15294779  T
Q  302 tgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggatttt 401  Q
     ||||||||||  ||||||| | |||||||||| ||||||||||   ||||||||| |||||| |||||||||| ||||||| |||||||||||||||||    
T  15294778 cgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttt 15294679  T
Q  402 gacaaca 408  Q
     ||||||    
T  15294678 tacaaca 15294672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 102 - 408
Target Start/End: Complemental strand, 15475346 - 15475041
Alignment:
Q  102 aaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaa 201  Q
    ||||||| || || ||||||||||||||||||| |||||||||||||||  |||||||||||||| || || |||||  |||||| ||||  |||||| |    
T  15475346 aaaatcgggactcctaaaatcgcaatcaaaatcgaaggattttactcaagaacttttgtagaatccatataagaaatcttaaaatcgcaagcaaaatcca 15475247  T
Q  202 tggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaat 301  Q
    ||||||||||| |          |||||||||||||||| |||| || |||||||||||||||||||||||||||||||| |||||||| ||||||||||    
T  15475246 tggattttaccta-aaaaaataatactaaatatatgttacaaatagtgtatagtcataaatgacttagtttataagaaattgtaaaatcgcaatcaaaat 15475148  T
Q  302 tgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggatttt 401  Q
     ||||||||||  ||||||| | |||||||||| ||||||||||   ||||||||| |||||| |||||||||| ||||||| |||||||||||||||||    
T  15475147 cgatggattttgcctattttggtattctactatcgatttgagtcgttgaaggtgaaaaaagtcgcaaaatcctgaattttaggatttaagtcgggatttt 15475048  T
Q  402 gacaaca 408  Q
     ||||||    
T  15475047 tacaaca 15475041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 55 - 411
Target Start/End: Original strand, 7489057 - 7489414
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||| | ||||||||||| |||| |||| |||||||||||   || ||||||||||||||||||||||  |||||||||||||| |||    
T  7489057 caaggttgtcaaaatcaggactttacttcaagtcgaaaggaaatagcaaaattaggactcgtaaaatcgcaatcaaaatcggaggattttactcaaggac 7489156  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| ||| |||||||||||| ||||| |||||| ||| |||||||  |          |||||||||||||||||||||| |||||||    
T  7489157 ttttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatgaattttactcaaaaatattaatactaaatatatgttataaatgatatatag 7489256  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctat----tttaggattctactatggatttgagtcaggga 350  Q
    |||||||||||||| ||||||||||||| ||||||  |||||||||| |||  ||||| |||||    ||||| ||||||||| |||||| ||||   ||    
T  7489257 tcataaatgacttaatttataagaaatcataaaattgcaatcaaaatcgataaattttgtctattttatttagaattctactacggattttagtcgttga 7489356  T
Q  351 aggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||||   |||||| ||| ||||||  |||||| | ||||||||||||| ||||    
T  7489357 aggtgaagaaag---caaaattctgtattttacgatttaattggggattttgacaataatg 7489414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 55 - 409
Target Start/End: Original strand, 29384086 - 29384444
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| | ||| |||||||||| |||  || || |||||||| | |||||||||||||| ||||||| |||||||||||||||  ||    
T  29384086 caaggttgtcaaaatcgggattttgcttcaggtcgaaagaaaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaactac 29384185  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn-----tactaaatatatgttataaatggta 249  Q
    |||||||||||  || || ||||| ||||||| ||||| |||||| ||||||||||||||               |||||||||||||||||||||||||    
T  29384186 ttttgtagaattaatataagaaatcgtaaaatcgcaatcaaaatcgatggattttaccaaaaaaaaaaatactaatactaaatatatgttataaatggta 29384285  T
Q  250 tatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggg 349  Q
    ||||||||||||||| ||  ||||||||||||||||||||| ||||| |||| |||| |||||  ||||||| ||||| |||||||||||||||||   |    
T  29384286 tatagtcataaatgaattgttttataagaaatcgtaaaatcgcaatc-aaatcgatgaattttgcctatttttggattatactatggatttgagtcgttg 29384384  T
Q  350 aaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    ||||||||||||||| |||||||   |||||||| ||||||  | |||||||||||||||    
T  29384385 aaggtgaagaaagtcgcaaaatctaagattttaggatttaaacctggattttgacaacaa 29384444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 127; E-Value: 2e-65
Query Start/End: Original strand, 54 - 371
Target Start/End: Complemental strand, 6811175 - 6810861
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||||||||||||  ||||  ||| ||| ||| ||||||||||| | |||||||||||||| ||||||| ||| |||||| ||||  |    
T  6811175 ccaaggttgtcaaaatcggaactttgtttcaaatcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaagaattttaatcaacta 6811076  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    |||||||||||| ||| || ||||||| ||||| ||||| |||||| ||||||||||||||          |||||||||||||||||||||| ||||||    
T  6811075 cttttgtagaatagatataagaaattg-aaaatcgcaatcaaaatcgatggattttaccaa-aaaaaataatactaaatatatgttataaatgatatata 6810978  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    || ||||||||||||||||||| ||||||||||||||  ||||||||| ||| ||||||  ||||||||  |||||||||||||||||||||   |||||    
T  6810977 gttataaatgacttagtttatatgaaatcgtaaaatcgtaatcaaaatcgat-gattttgcctattttaaaattctactatggatttgagtcgttgaagg 6810879  T
Q  354 tgaagaaagtcacaaaat 371  Q
    ||||||||||| ||||||    
T  6810878 tgaagaaagtcgcaaaat 6810861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 56 - 410
Target Start/End: Complemental strand, 17647351 - 17646993
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||| |||||||| | ||| |||||||||| ||| ||  ||||||||||| | || ||||||||||||||||||| |||||||||||||||  | |    
T  17647351 aaggttgttaaaatcgggattttgcttcaggtcgaaagagatgagcaaaatcgacaatcataaaatcgcaatcaaaatcgaaggattttactcaactagt 17647252  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntac--taaatatatgttataaatggtatata 253  Q
    |||||||||||||| || ||||||||||||| ||||| |||||| |||||||||| |||           ||  ||||||||| ||| ||||||||||||    
T  17647251 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaaaaaataataacattaaatatattttacaaatggtatata 17647152  T
Q  254 gt--cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaa 351  Q
     |   | ||||||||  |||||||||||||||| ||||  |||||||||| |||| |||||| ||||||| ||||||||||||| |||||||||   |||    
T  17647151 ataaaaaaaatgactaggtttataagaaatcgttaaataacaatcaaaatcgatgaatttttcctattttgggattctactatgaatttgagtcgttgaa 17647052  T
Q  352 ggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||||||||||||| |||||||||| ||||||  ||||||||||| ||||||||||||||    
T  17647051 ggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaat 17646993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 56 - 411
Target Start/End: Complemental strand, 31424518 - 31424162
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||  | |||||||||||||| ||| ||  ||||||||||| | ||||||||||||||||||||    ||||||||||||||  |||    
T  31424518 aaggttgtcaaaatcgagattttacttcaggtcgaaagagatgagcaaaatcgacaatcgtaaaatcgcaatcaaaac---aggattttactcaactact 31424422  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn----tactaaatatatgttataaatggtata 251  Q
     |||| |||| ||| || ||||| ||||||| |||||  ||||| || |||||||| ||              ||||||||||||||||||| |||||||    
T  31424421 cttgtggaattgatataagaaatagtaaaattgcaatccaaatcgatagattttacaaaaaaaaaaaaaaaaatactaaatatatgttataattggtata 31424322  T
Q  252 tagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaa 351  Q
    |||||||||| |||||||||||||||||||||||||||| ||||||||||  |||||||||  ||||||| ||||||| |||||||||||||||   |||    
T  31424321 tagtcataaacgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttgggattcttctatggatttgagtcgttgaa 31424222  T
Q  352 ggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
     | ||||||||||  ||||||||| ||||||| ||||||||| |||||||||||| ||||    
T  31424221 agggaagaaagtcgtaaaatcctgaattttagaatttaagtcaggattttgacaataatg 31424162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 54 - 411
Target Start/End: Original strand, 22909977 - 22910332
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||||  ||||| ||| |||| ||| ||| || |||||||| | |||||||||||||| | ||||  |||||||||| ||||  |    
T  22909977 ccaaggttgtcaaaatcggat-tttacatcatgtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccgaaattgaaggattttattcaacta 22910075  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
     ||||||||||||||| || ||||| ||||||| ||||| ||| || |||   |||| |||          |||||| ||||||||||||||||||||||    
T  22910076 tttttgtagaatcgatataagaaatcgtaaaatcgcaatcaaagtcgatgatgtttaacaa-aaaaagtagtactaagtatatgttataaatggtatata 22910174  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    ||||||||| ||||| ||||||||||||| ||||||| ||||||||||  |||||||||  |||||||| ||||||||||| ||||||||||   ||| |    
T  22910175 gtcataaattacttaatttataagaaatcttaaaatcgcaatcaaaatcaatggattttgcctattttaagattctactatagatttgagtcgttgaatg 22910274  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||  ||||||||  ||||||| |||||||||||||| || ||| |||||    
T  22910275 tgaagaaagtcgtaaaatcctaaattttaggatttaagtcgggatgtttacatcaatg 22910332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 113 - 342
Target Start/End: Complemental strand, 32424631 - 32424400
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    ||||||||||||||| |||||| ||||||||||||||| || ||||||||||||||  |||||||||||||||| ||||| |||||| || ||||||| |    
T  32424631 tcgtaaaatcgcaattaaaatcgaaggattttactcaaggagttttgtagaatcgagataggaaattgtaaaatcgcaataaaaatcgatagattttatc 32424532  T
Q  213 aacnnnnnnnnntactaaatatat--gttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatt 310  Q
     |          ||||||||||||  |||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||||||  ||  |||    
T  32424531 cagaaaaattaatactaaatatatatgttataaatggtatatagtcataaatgacttagtatataataaatcgtaaaatcgcaatcaaaatctataaatt 32424432  T
Q  311 ttttctattttaggattctactatggatttga 342  Q
    || |||||||||||||||||||||| ||||||    
T  32424431 ttgtctattttaggattctactatgaatttga 32424400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 97; E-Value: 2e-47
Query Start/End: Original strand, 225 - 406
Target Start/End: Original strand, 3094187 - 3094378
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttata----------agaaatcgtaaaatctcaatcaaaattgatggatttttt 314  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||          | ||||||||||||| |||||||||| ||||||||||      
T  3094187 tactaaatatatgttataaatggtatatagtcataaatgacttagtttatataaaaaaaaaaaaaatcgtaaaatcgcaatcaaaatcgatggattttgc 3094286  T
Q  315 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaa 406  Q
    |||||||||||||||||||||||||||||||   |||||||||||||||  |||||||||| ||||||  ||||||||||  ||||||||||    
T  3094287 ctattttaggattctactatggatttgagtcgttgaaggtgaagaaagtagcaaaatcctgaattttaagatttaagtcgaaattttgacaa 3094378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 96; E-Value: 7e-47
Query Start/End: Original strand, 171 - 413
Target Start/End: Original strand, 27836354 - 27836596
Alignment:
Q  171 taggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagt 270  Q
    ||||||||||||||||  |||| |||||| ||||||||||||| |         ||||||||| ||||||||||||||||||||||||||||||||||||    
T  27836354 taggaaattgtaaaatcacaatcaaaatcgatggattttaccagcaaaaaaaaatactaaatacatgttataaatggtatatagtcataaatgacttagt 27836453  T
Q  271 ttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaa 370  Q
    ||||||||||| |||||||   |||||||||||||| |||||   |||||||| |||||||||||||||| |||    ||||||||| |||  | |||||    
T  27836454 ttataagaaattgtaaaattgtaatcaaaattgatgaattttgcttattttagaattctactatggatttcagttgttgaaggtgaataaaaccgcaaaa 27836553  T
Q  371 tcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||| ||||||| || |||||  | |||||||||||||||||    
T  27836554 tcctgaattttaggatctaagtttgaattttgacaacaatggt 27836596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 88; E-Value: 4e-42
Query Start/End: Original strand, 56 - 211
Target Start/End: Original strand, 24414062 - 24414217
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||||||||| |||||||||||||| |||| ||||||||||||||||  ||| |||||||||||||||||||||| |||||||||||||||  | |    
T  24414062 aaggttgtcaaaattggaactttacttcatgtcgaaagggaatagcaaaatttagactcgtaaaatcgcaatcaaaatcgaaggattttactcaagaatt 24414161  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttac 211  Q
    |||||||||||||| ||||||||||||||||   ||| ||| |||||| |||||||    
T  24414162 tttgtagaatcgatataggaaattgtaaaatcctaatcaaattcaatgaattttac 24414217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 228 - 322
Target Start/End: Original strand, 9212202 - 9212296
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttta 322  Q
    |||||||| |||||||||||||||| ||||||||||| ||||||||||||||||| ||||||| |||||||||| ||||||||||| ||||||||    
T  9212202 taaatataggttataaatggtatatggtcataaatgatttagtttataagaaatcttaaaatcgcaatcaaaatcgatggatttttcctatttta 9212296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 65 - 175
Target Start/End: Complemental strand, 2040464 - 2040354
Alignment:
Q  65 aaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaa 164  Q
    |||||||| ||||||||||| |||| ||| || |||||||||||  | |||||||||||||||||||||| ||||||||||||||  |||||||||||||    
T  2040464 aaaatcgggactttacttcaagtcgaaagagagtagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggattttactcatggacttttgtagaa 2040365  T
Q  165 tcgatctagga 175  Q
    ||||| |||||    
T  2040364 tcgatgtagga 2040354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 228 - 406
Target Start/End: Original strand, 6292289 - 6292467
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggatt 327  Q
    ||||||||| |||||||||||||||||| ||||||||||||| |||||| |||| |||| | | |||||||||| | || ||||||  |||||||| |||    
T  6292289 taaatatattttataaatggtatatagtgataaatgacttagattataataaattgtaagaccgcaatcaaaatcgttgaatttttcttattttagaatt 6292388  T
Q  328 ctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaa 406  Q
     |||||||| ||||||||    ||| |||| |||||||||||||| |  ||||||  ||||||||||| ||||| ||||    
T  6292389 atactatgggtttgagtcgttaaagatgaaaaaagtcacaaaatcttaaattttaagatttaagtcggtattttaacaa 6292467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 63 - 177
Target Start/End: Complemental strand, 16752370 - 16752256
Alignment:
Q  63 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtag 162  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| | || |||||||||||||| ||||||| ||||||||||||||| || ||||||||    
T  16752370 tcaaaattggaactttacttcaagtcgaaagggagtagcaaaattgggactcgtaaaatcgcaaacaaaatcgaaggattttactcaaggaattttgtag 16752271  T
Q  163 aatcgatctaggaaa 177  Q
    ||| ||| |||||||    
T  16752270 aattgatgtaggaaa 16752256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 53 - 169
Target Start/End: Original strand, 40541592 - 40541708
Alignment:
Q  53 cccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaag 152  Q
    ||||||||| |||||||||| ||||||||||| |||| |||| | ||||||||||| || |||||||||||||||||||||  || ||||||| |||| |    
T  40541592 cccaaggttatcaaaatcgggactttacttcaagtcgaaaggaagtagcaaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttattcaagg 40541691  T
Q  153 acttttgtagaatcgat 169  Q
    |||| ||||||||||||    
T  40541692 acttctgtagaatcgat 40541708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 335 - 411
Target Start/End: Original strand, 477101 - 477177
Alignment:
Q  335 ggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||| |||||  ||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  477101 ggatttaagtcattgaaggtgaagaaagtcacaaaatcctggattttaggatttaagtcaggattttgacaacaatg 477177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 103 - 214
Target Start/End: Original strand, 15761180 - 15761291
Alignment:
Q  103 aaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaat 202  Q
    |||| |||| |||||||||||||||  ||||| |||||||||||||||  ||||||||||||||||| || ||| | ||||||| ||||| |||||| ||    
T  15761180 aaattgagaatcgtaaaatcgcaatataaatcgaaggattttactcaattacttttgtagaatcgatataagaagtagtaaaatcgcaatcaaaatcgat 15761279  T
Q  203 ggattttaccaa 214  Q
    ||||||||||||    
T  15761280 ggattttaccaa 15761291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 98 - 166
Target Start/End: Complemental strand, 7262074 - 7262006
Alignment:
Q  98 tagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatc 166  Q
    ||||||||||| || ||||||||||||||||||||| |||||||||||||||| |||||||||||||||    
T  7262074 tagcaaaatcgggactcgtaaaatcgcaatcaaaattaaaggattttactcaaggacttttgtagaatc 7262006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 17566453 - 17566316
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||| | |||||| | | ||| |||||||||  ||||||| |||||||| || | ||||||||| |||||||||||| ||| |||||||||||  ||    
T  17566453 caaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactac 17566354  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaat 192  Q
    ||||||||||  ||| || ||||||||||||| |||||    
T  17566353 ttttgtagaacagatataagaaattgtaaaatcgcaat 17566316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 315 - 415
Target Start/End: Original strand, 15761473 - 15761573
Alignment:
Q  315 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggtg 414  Q
    ||||||| ||||| | ||||| |||||||||   |||||| || ||| ||||||||||||||| ||||| |||||||||| |||||||||||||||||||    
T  15761473 ctattttgggattttgctatgaatttgagtcgttgaaggtaaataaactcacaaaatcctggagtttaggatttaagtcgagattttgacaacaatggtg 15761572  T
Q  415 t 415  Q
    |    
T  15761573 t 15761573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 96 - 163
Target Start/End: Original strand, 27836114 - 27836181
Alignment:
Q  96 aatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtaga 163  Q
    |||||||||||   ||||||||||||||||||||||||| ||||||||||||||| ||||||||||||    
T  27836114 aatagcaaaattaggattcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtaga 27836181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 15231976 - 15231839
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||| ||| |||  | ||| ||||| |||| ||| ||| ||||||||||| | ||||||||||||||  ||||||  | ||||||||||||  ||    
T  15231976 caaggttgttaaattcgagattttgcttcaagtcgaaagagaagagcaaaatcgacaatcgtaaaatcgcaactaaaatcgtacgattttactcaactac 15231877  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaat 192  Q
    ||||||||||||||| ||  |||||||||||| |||||    
T  15231876 ttttgtagaatcgatataaaaaattgtaaaatcgcaat 15231839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 411
Target Start/End: Original strand, 24056594 - 24056698
Alignment:
Q  307 gattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaa 406  Q
    |||||| |||||||| |||||   |||||||||||||||    || ||||| |||||| |||||||||||||||||| |||||||||  |||||||| ||    
T  24056594 gattttgtctattttgggatttcgctatggatttgagtcgttaaatgtgaataaagtcgcaaaatcctggattttaggatttaagtcaagattttgataa 24056693  T
Q  407 caatg 411  Q
    |||||    
T  24056694 caatg 24056698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 366 - 413
Target Start/End: Complemental strand, 23136393 - 23136346
Alignment:
Q  366 caaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    |||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  23136393 caaaatcctgaattttaggatttaagtcgggattttgacaataatggt 23136346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 59 - 166
Target Start/End: Original strand, 24056348 - 24056455
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    |||||||||| ||  | ||| |||||||||| ||||||| |||||||| ||   || |||||| | |||||||||| |||||||||||||||  | ||||    
T  24056348 gttgtcaaaaccgagattttgcttcaggtcgaaagggaagagcaaaattgaatatcataaaatggtaatcaaaatcgaaggattttactcaactagtttt 24056447  T
Q  159 gtagaatc 166  Q
    ||||||||    
T  24056448 gtagaatc 24056455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 369 - 413
Target Start/End: Original strand, 27672303 - 27672347
Alignment:
Q  369 aatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    |||| |||||||||| |||||||||||||||||| ||||||||||    
T  27672303 aatcttggattttagaatttaagtcgggattttggcaacaatggt 27672347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 139 - 214
Target Start/End: Complemental strand, 8582314 - 8582239
Alignment:
Q  139 gattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||||||||  ||||||||||||| ||| || ||||| |||||||  |||| |||||| ||| ||||||||||    
T  8582314 gattttactcaactacttttgtagaattgatataagaaatcgtaaaattacaatcaaaatcgatgaattttaccaa 8582239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 54 - 133
Target Start/End: Complemental strand, 26879866 - 26879787
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 133  Q
    |||||||||||||| |||  | |||| ||||||| | ||||||  ||||||||| | | |||||||||||||||||||||    
T  26879866 ccaaggttgtcaaagtcgtgattttagttcaggttgaaagggatcagcaaaatcaaaaatcgtaaaatcgcaatcaaaat 26879787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 411
Target Start/End: Original strand, 17788374 - 17788436
Alignment:
Q  349 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||  |||||| ||||||||| |||||||  |||||||| | ||||||||||||||||    
T  17788374 gaaggtgagtaaagtctcaaaatcctagattttaaaatttaagttgcgattttgacaacaatg 17788436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 40541781 - 40541819
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgact 266  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  40541781 taaatatatgttataaattgcatatagtcataaatgact 40541819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 16752192 - 16752156
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatga 264  Q
    |||||||||||||||||| | ||||||||||||||||    
T  16752192 taaatatatgttataaattgcatatagtcataaatga 16752156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 310
Target Start/End: Complemental strand, 26879810 - 26879778
Alignment:
Q  278 aaatcgtaaaatctcaatcaaaattgatggatt 310  Q
    ||||||||||||| |||||||||||||||||||    
T  26879810 aaatcgtaaaatcgcaatcaaaattgatggatt 26879778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 278 - 310
Target Start/End: Original strand, 30240264 - 30240296
Alignment:
Q  278 aaatcgtaaaatctcaatcaaaattgatggatt 310  Q
    ||||||||||||| |||||||||||||||||||    
T  30240264 aaatcgtaaaatcgcaatcaaaattgatggatt 30240296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 185; Significance: 1e-100; HSPs: 44)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 55 - 414
Target Start/End: Original strand, 9351837 - 9352196
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||||   |||||||||||||||| ||| |||||||||||||| || ||||||||||||||||||||||  |||||||||  ||| |||    
T  9351837 caaggttgtcaaaatcaagactttacttcaggtcgaaagcgaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgtaggattttatccaaggac 9351936  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    |||||||||||| || ||||||||||||||||  |||| |||||| ||| |||||||| |          ||||||||||||||||||||||||||||||    
T  9351937 ttttgtagaatctatataggaaattgtaaaatcacaatcaaaatcgatgaattttacccaaaaaaattaatactaaatatatgttataaatggtatatag 9352036  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    ||| |||||||||||||||||||||||| ||||||| |||||||||| || ||||||| |||||||| ||| ||| |||| ||||||||||   ||||||    
T  9352037 tcaaaaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgacggattttgtctattttgggactctgctatagatttgagtctttgaaggt 9352136  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggtg 414  Q
    |||||||||| ||||| |||||||||||| ||||||||||||||||||||||||||||||    
T  9352137 gaagaaagtcgcaaaaccctggattttaggatttaagtcgggattttgacaacaatggtg 9352196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 55 - 410
Target Start/End: Complemental strand, 23529011 - 23528656
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||||||||||||| |||||||   || |||| || || |||| || |||||||||||||||||||||| ||||||||||||||| |||    
T  23529011 caaggttgtcaaaatcggaactttatttcaggttaaaaaggaacagtaagatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 23528912  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||| |          || |||||||| ||||||||||||||||||    
T  23528911 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaataataataataataaatatacgttataaatggtatatag 23528812  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    ||||||||||||| |||||||||||||||||||||| || ||||||| ||| ||||||  |||||||||||||||||||||||||||||||   |||| |    
T  23528811 tcataaatgacttcgtttataagaaatcgtaaaatcgcattcaaaatcgatagattttgcctattttaggattctactatggatttgagtcgttgaagat 23528712  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||| |||||||||| ||||||  |||||||| |||||||||||||||||    
T  23528711 gaagaaagtcgcaaaatcctgaattttaagatttaagttgggattttgacaacaat 23528656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 184; E-Value: 2e-99
Query Start/End: Original strand, 55 - 413
Target Start/End: Complemental strand, 13100545 - 13100188
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| ||||||||||| |||| |||||||| |||||||||  | |||||||||||||||||||||||||||||||||||||| |||    
T  13100545 caaggttgtcaaaatcgggactttacttcaagtcgaaagggaatggcaaaatcggaactcgtaaaatcgcaatcaaaatcaaaggattttactcaaggac 13100446  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
     |||||||||||||| || |||||  |||||| ||||| |||||| |||||||||||| |          |||||||||||||||| |||||||||||||    
T  13100445 atttgtagaatcgatataagaaatcttaaaatcgcaatcaaaatcgatggattttaccca-aaaaataaatactaaatatatgttacaaatggtatatag 13100347  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    ||||||||||||| ||||||||||||| |||||||| |||||||||| ||||| ||||  |||||||||||||||||||||||||||||||   ||| ||    
T  13100346 tcataaatgacttggtttataagaaattgtaaaatcgcaatcaaaatcgatggtttttgcctattttaggattctactatggatttgagtcgttgaacgt 13100247  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||||||||  |||||||| |||||||| |||||||| ||||||||||||| ||||||    
T  13100246 gaagaaagtcgtaaaatcctcgattttagaatttaagttgggattttgacaataatggt 13100188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 55 - 411
Target Start/End: Original strand, 18304592 - 18304941
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| |||| ||||||||||| |||| || ||||||||||       |||||||||| |||||||| |||||||||||| || |||    
T  18304592 caaggttgtcaaaatcgggacttcacttcaggtcgaaaggaaaaagcaaaatcg-------taaaatcgcattcaaaatcgaaggattttactaaaggac 18304684  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||| |||          ||||||||||| ||||| ||||||||||||    
T  18304685 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttatcaaaaaaaattaatactaaatatacgttatgaatggtatatag 18304784  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtc-agggaagg 353  Q
    ||||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||| ||||||||  |||||||||||| |||||||||    |||||    
T  18304785 tcataaatgacttagcttataagaaatcgt-aaatcgcaatcaaaattgatggattttgtctattttgagattctactatgaatttgagtcgtttgaagg 18304883  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||| |||||| ||||||||||| |||||||| ||||||||||||||||||    
T  18304884 tgaagaaagtcgcaaaatactggattttaggatttaagttgggattttgacaacaatg 18304941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 169; E-Value: 2e-90
Query Start/End: Original strand, 74 - 408
Target Start/End: Original strand, 19009741 - 19010073
Alignment:
Q  74 actttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctag 173  Q
    |||||||||||| ||| |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||  ||||||||| ||||||| |||    
T  19009741 actttacttcagatcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaggattttactcaagaacttttgtaaaatcgatatag 19009840  T
Q  174 gaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagttta 273  Q
    ||||||||||||| ||||| ||||||| |||||||||||            || |||||||  ||||||||||||||||||| |||||||||||| ||||    
T  19009841 gaaattgtaaaatcgcaatcaaaatcattggattttaccccaaaaaaaaaatattaaatat--gttataaatggtatatagttataaatgacttaattta 19009938  T
Q  274 taagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcc 373  Q
    ||||||||||||||||| |||||||||| ||||||||||   |||||||| ||| |||||||||||| |||||  ||||||||| |||||| ||||||||    
T  19009939 taagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttagaattttactatggatttaagtcattgaaggtgaaaaaagtcgcaaaatcc 19010038  T
Q  374 tggattttagtatttaagtcgggattttgacaaca 408  Q
    || ||||||| ||||||||| ||||||||||||||    
T  19010039 tgaattttaggatttaagtccggattttgacaaca 19010073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 168; E-Value: 7e-90
Query Start/End: Original strand, 54 - 411
Target Start/End: Original strand, 25146541 - 25146898
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||| | |||||||||||||| | ||||||||||||||||||  | |||||||||||||||||||||| ||||||||||||||| |     
T  25146541 ccaaggttgtcaaaatcaggactttacttcaggttgaaagggaatagcaaaatcggaaatcgtaaaatcgcaatcaaaatcgaaggattttactcaaggt 25146640  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaa-tagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatat 252  Q
    |||| ||||||||||| ||| ||||| ||||| | ||||| |||||| |||||||||||| |          ||||||||||| ||||||||| ||||||    
T  25146641 ctttcgtagaatcgatatagaaaattctaaaaatcgcaatcaaaatcgatggattttacccaaaaaaattgatactaaatatacgttataaattgtatat 25146740  T
Q  253 agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
    |||||||||| |||||||||||||||||||||||| || |||| |||||||||| | ||| |||||||| ||||||||||||| |||||||||   ||||    
T  25146741 agtcataaataacttagtttataagaaatcgtaaa-tcgcaattaaaattgatgtactttgtctattttgggattctactatgaatttgagtcgttgaag 25146839  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||| |||||| ||| ||||||| ||||||||| |||||||||||||||||    
T  25146840 gtgaagaaagtcgcaaaattctgaattttaggatttaagtcaggattttgacaacaatg 25146898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 64 - 411
Target Start/End: Original strand, 9954816 - 9955165
Alignment:
Q  64 caaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtaga 163  Q
    ||||||||||||||||||| |||||| |||||||||||||||||| || |||||||||||||||||||||| |||||||||||  || |||||||  |||    
T  9954816 caaaatcggaactttacttaaggtcgaaagggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttaccaaaggacttttcaaga 9954915  T
Q  164 atcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc--aacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaa 261  Q
    ||| || |||||||||||||||| ||||| || ||| |||||||||||   ||          |||| ||||||||||||||||||||||||||||||||    
T  9954916 atccatataggaaattgtaaaatcgcaatcaagatcgatggattttacacaaaaaaataataatactgaatatatgttataaatggtatatagtcataaa 9955015  T
Q  262 tgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaa 361  Q
    |||| |||||||||||||||||||||||| |||||||||| ||||||||||   |||||| |||||||||  ||||||| ||||   |||||||||||||    
T  9955016 tgacctagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgcttattttgggattctacattggatttaagtcgttgaaggtgaagaaa 9955115  T
Q  362 gtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||| |||||||||  ||||||| |||||||| ||||||||||||||||||    
T  9955116 gtcgcaaaatcctaaattttaggatttaagttgggattttgacaacaatg 9955165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 58 - 403
Target Start/End: Original strand, 16125232 - 16125580
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    |||||| ||||||||||||||||||||||||| |||||||||| ||||| | || |||||||||||||||||||||| ||||||||||||||| ||| ||    
T  16125232 ggttgttaaaatcggaactttacttcaggtcgaaagggaatagtaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacatt 16125331  T
Q  158 tgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtca 257  Q
    |||||||||||| || ||||||||||||| ||||| |||||| |||||  ||||| |          ||||||||||||||||||||||||||||| |||    
T  16125332 tgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggacgttacccaaaaataataatactaaatatatgttataaatggtatatattca 16125431  T
Q  258 taaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg-- 355  Q
    ||||||||||||||||||| ||||||||||||| ||||||||||  |||||||||  |||||||| |||| ||||||||||||  |||   |||||||      
T  16125432 taaatgacttagtttataaaaaatcgtaaaatcgcaatcaaaatcaatggattttgcctattttaagattttactatggatttaggtcgttgaaggtgaa 16125531  T
Q  356 -aagaaagtcacaaaatcctggattttagtatttaagtcgggattttga 403  Q
     ||||||||| |||||||||| ||||||| ||||||||| |||||||||    
T  16125532 aaagaaagtcgcaaaatcctgaattttaggatttaagtcaggattttga 16125580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 164; E-Value: 2e-87
Query Start/End: Original strand, 57 - 411
Target Start/End: Original strand, 21846050 - 21846398
Alignment:
Q  57 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactt 156  Q
    |||||||||||||| | |||||||| ||||||| |||||||||||||||||| || || ||||||||||||||||||| ||||||||||||||| |||||    
T  21846050 aggttgtcaaaatcaggactttactccaggtcgaaagggaatagcaaaatcgggactcttaaaatcgcaatcaaaatcgaaggattttactcaaggactt 21846149  T
Q  157 ttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtc 256  Q
    ||||||||||||| || ||||||||||||| ||||| |||||  ||| |||||||| |          |||||||||||||||||||||  ||||||||     
T  21846150 ttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatagatgaattttacccaaaaaaattaatactaaatatatgttataaattatatatagtt 21846249  T
Q  257 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 356  Q
    |||||||||   |||||| | |||   ||||||| |||||||||| |||||||||||||||||||  ||||||||||||||||||||||   ||||||||    
T  21846250 ataaatgac---gtttatgaaaaa---taaaatcgcaatcaaaatcgatggattttttctattttgagattctactatggatttgagtcgttgaaggtga 21846343  T
Q  357 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    | |||||| |||||||||||||||||| |||||| ||||||||||||||||||||    
T  21846344 aaaaagtcgcaaaatcctggattttaggatttaactcgggattttgacaacaatg 21846398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 143; E-Value: 6e-75
Query Start/End: Original strand, 55 - 409
Target Start/End: Original strand, 42179845 - 42180193
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||| ||| |||||||| |||   |||||||||||| |||||| | |||||||||||||||||||||| |||||||||| || | |||    
T  42179845 caaggttgtcaaaatcagaaatttacttcgggttaaaagggaatagcataatcgaaactcgtaaaatcgcaatcaaaatcgaaggattttattcgaggac 42179944  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn-tactaaatatatgttataaatggtatata 253  Q
    |||||||||       |||||||||||||||   |||| |||||| ||||||||||||||           ||||| |||||||||||||||||||||||    
T  42179945 ttttgtaga-------taggaaattgtaaaaccacaatcaaaatcgatggattttaccaaaaaaaatataatactatatatatgttataaatggtatata 42180037  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    |||||||||||||||||||||||||||||||| |||| |||||||||| |||| |||||  |||||||   |||||||||||||||||| ||   |||||    
T  42180038 gtcataaatgacttagtttataagaaatcgtagaatcacaatcaaaatcgatgtattttgcctattttgaaattctactatggatttgactcgttgaagg 42180137  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
     |||||||||| |||||||||| ||||||| |||||||| ||||||||||||||||    
T  42180138 ggaagaaagtcgcaaaatcctgaattttagaatttaagttgggattttgacaacaa 42180193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 125 - 410
Target Start/End: Original strand, 13276112 - 13276395
Alignment:
Q  125 aatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn 224  Q
    |||||||||| |||||||  ||| || || ||||||||||||||| || ||||||||||||| ||||| |||||| ||||| | ||||||              
T  13276112 aatcaaaatcgaaggatt--acttaaggaattttgtagaatcgatataagaaattgtaaaattgcaatcaaaatcgatggactataccaaaaaataataa 13276209  T
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagg 324  Q
    |||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||| |||||||||| ||| ||||||  ||||||||||    
T  13276210 tactaaatatatgttataaatgatatatagtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgattgattttgcctattttagg 13276309  T
Q  325 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||||||||||||||||  |||   |||| ||||||||||| ||||||||| |||||||| |||||| |||||||||||||||||||    
T  13276310 attctactatggatttaggtcgttgaagatgaagaaagtcgcaaaatcctagattttaggatttaaatcgggattttgacaacaat 13276395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 55 - 409
Target Start/End: Original strand, 17869524 - 17869873
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||| ||||||||||||| ||| || ||||||||  ||||||| |||||||||| ||  ||||||||||||||||||||||||||||||||||||| |||    
T  17869524 caagattgtcaaaatcgggactctaattcaggtcaaaagggaagagcaaaatcgggacacgtaaaatcgcaatcaaaatcaaaggattttactcaaggac 17869623  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    |||| ||||||| || ||  |||||||||||| ||||| |||||| ||| ||||||||||          ||||||||||||||| ||||| |||||| |    
T  17869624 ttttatagaatcaatgtaaaaaattgtaaaatcgcaatcaaaatcgatgaattttaccaaaaaataataatactaaatatatgttgtaaatagtatatgg 17869723  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    | ||||| ||||||||||| |||||||||||||||  |||||||||| || | |||||  |||||||||||||||||| |||||||  |||   ||||||    
T  17869724 ttataaaagacttagtttaaaagaaatcgtaaaattgcaatcaaaatcgaagaattttgcctattttaggattctactgtggatttaggtcgtcgaaggt 17869823  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    |||||||||| ||||||||     ||||  ||||||||| |||||||||||||||    
T  17869824 gaagaaagtcgcaaaatcc-----tttaagatttaagtcaggattttgacaacaa 17869873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 55 - 408
Target Start/End: Complemental strand, 12513626 - 12513283
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| || | ||| |||||||||  ||| ||| ||||||||||| | | |||||||||||| |||||||||||||||||||||||  ||    
T  12513626 caaggttgtcaaaattgggattttgcttcaggtcaaaagagaagagcaaaatcgacaattgtaaaatcgcaaccaaaatcaaaggattttactcaactac 12513527  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    || ||||||       || ||||||||||||| ||||| |||||| || |||||||||||          || |||||||  |||||| |||||||||||    
T  12513526 ttctgtaga-------taagaaattgtaaaatcgcaatcaaaatcgatagattttaccaa-aaaatataatattaaatat--gttatatatggtatatag 12513437  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    || ||||||||||||||||||||||||||||||||| |||||||||| ||||||||||   ||||||| |||| |||||||||||||||||   |||| |    
T  12513436 tcgtaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgattattttatgattttactatggatttgagtcgttgaagct 12513337  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 408  Q
    |||||||||| ||||||||| |||| ||| ||||||||||||||||||||||||    
T  12513336 gaagaaagtcgcaaaatcctagattgtaggatttaagtcgggattttgacaaca 12513283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 116; E-Value: 8e-59
Query Start/End: Original strand, 91 - 410
Target Start/End: Original strand, 9128648 - 9128969
Alignment:
Q  91 aagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagca 190  Q
    |||||||||||||||||| || |||||||||| | ||||||||| |||||||||||| || || |||||||| |||||| ||| |||||||||||| |||    
T  9128648 aagggaatagcaaaatcgggactcgtaaaatcacgatcaaaatcgaaggattttactaaaggatttttgtaggatcgatatagaaaattgtaaaatcgca 9128747  T
Q  191 attaaaatcaatggattttaccaacnnnnnnnnn--tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaa 288  Q
    || |||||  ||| ||||||| ||            ||||||| ||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||    
T  9128748 atcaaaatttatgaattttacaaatgataataataatactaaagatatgttataaatggtatatagtcaaaaataacttagtttataagaaatcgtcaaa 9128847  T
Q  289 tctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtattt 388  Q
    || |||||||||| |||| ||||| ||||||||| |||||||||||  |||||||||    || |||||||||||| ||| |||||   |||||| ||||    
T  9128848 tcgcaatcaaaatcgatgaattttgtctattttaagattctactataaatttgagtcgttaaatgtgaagaaagtcgcaagatcctaatttttaggattt 9128947  T
Q  389 aagtcgggattttgacaacaat 410  Q
    |||||| |||||| ||||||||    
T  9128948 aagtcgtgattttaacaacaat 9128969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 106; E-Value: 7e-53
Query Start/End: Original strand, 58 - 322
Target Start/End: Complemental strand, 32881672 - 32881415
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    |||| |||||||||| | ||| |||||| | | ||| ||| ||||||||||| | ||||||||||||||   ||||| |||||||||||||||  || ||    
T  32881672 ggttttcaaaatcgggattttgcttcagattgaaagagaaaagcaaaatcgacaatcgtaaaatcgcaactgaaatcgaaggattttactcaactacgtt 32881573  T
Q  158 tgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtca 257  Q
    |||||||||||| || ||||||||||||| ||||| ||||||||||| |||||| ||          |||||||||||||||||||||||||||||||||    
T  32881572 tgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcaatggcttttacaaa-------aaatactaaatatatgttataaatggtatatagtca 32881480  T
Q  258 taaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttta 322  Q
    | ||||||||| ||||||||||||||||||||| |||||||||| |||| |||||  ||||||||    
T  32881479 tgaatgacttaatttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctatttta 32881415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 102; E-Value: 2e-50
Query Start/End: Original strand, 225 - 411
Target Start/End: Original strand, 9327157 - 9327345
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaa--tgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatttta 322  Q
    |||||||||||| |||||||||||||||||||| |||  ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||     
T  9327157 tactaaatatatattataaatggtatatagtcaaaaaaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctattttg 9327256  T
Q  323 ggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||| |||||| ||||||||||   ||||||| |||||||| ||||| |||  ||||||| ||||||||| ||||||| |||||||||    
T  9327257 ggattttactatagatttgagtcgttgaaggtgtagaaagtcgcaaaaccctaaattttaggatttaagtcaggattttaacaacaatg 9327345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 99; E-Value: 1e-48
Query Start/End: Original strand, 58 - 311
Target Start/End: Complemental strand, 47786209 - 47785958
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    ||||||||||||||| | ||| ||| |||| | ||| ||| ||||||||||| | |||||||||| ||| ||||||| |||||||||||||||  |||||    
T  47786209 ggttgtcaaaatcgggatttt-ctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcacaaccaaaatcgaaggattttactcaactacttt 47786111  T
Q  158 tgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtca 257  Q
    |||||||| ||| || |||||   ||||| | ||| |||||| ||||||||||||| |         |||||||||||||||||||||||||||||||||    
T  47786110 tgtagaattgatataagaaatcacaaaatcgaaataaaaatcgatggattttacca-caaaaaataatactaaatatatgttataaatggtatatagtca 47786012  T
Q  258 taaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattt 311  Q
    ||||||||||||||||||||||||||||||||  |||||||||  |||||||||    
T  47786011 taaatgacttagtttataagaaatcgtaaaattgcaatcaaaaccgatggattt 47785958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 56 - 192
Target Start/End: Original strand, 14074258 - 14074394
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||| | |||||||||||||||| |||||||||||||||| |  | || ||||||| ||||||||||| ||||||||||||||| ||||    
T  14074258 aaggttgtcaaaatcaggactttacttcaggtcgaaagggaatagcaaaattggaactcataaaatcacaatcaaaatcgaaggattttactcaaggact 14074357  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaat 192  Q
    |||||||||||||| |||||||||||||||| |||||    
T  14074358 tttgtagaatcgatataggaaattgtaaaatcgcaat 14074394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 55 - 214
Target Start/End: Original strand, 17055694 - 17055852
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||||||  |||||||| |||||| ||||| || | ||||||| || |||||||||||||||||||||| |||||||||||||||  ||    
T  17055694 caaggttgtcaaaatcgggtctttactt-aggtcgaaaggggattgtaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaactac 17055792  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    |||||||||||||||  | ||||||||||||| ||||| |||||  ||||||||||||||    
T  17055793 ttttgtagaatcgatacaagaaattgtaaaattgcaatcaaaatggatggattttaccaa 17055852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 230 - 333
Target Start/End: Complemental strand, 18228380 - 18228278
Alignment:
Q  230 aatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattct 329  Q
    ||||||||||||||||||||||||||||||||| ||||| ||||||||||||| ||||||| |||||||||||||||||||||  ||||||| |||||||    
T  18228380 aatatatgttataaatggtatatagtcataaataacttaatttataagaaatcataaaatc-caatcaaaattgatggattttgcctattttgggattct 18228282  T
Q  330 acta 333  Q
    ||||    
T  18228281 acta 18228278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 54 - 209
Target Start/End: Original strand, 41032546 - 41032701
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||| || | |||||||||||| | ||| ||| |||||||| || | ||||||||||||||  |||||| ||| |||||||||||  |    
T  41032546 ccaaggttgtcaaaatagggattttacttcaggttgaaagagaagagcaaaattgataatcgtaaaatcgcaactaaaatcgaagaattttactcaacta 41032645  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggatttt 209  Q
     ||||||||||||||| || ||||||||||||| |||||||||||| |||||||||    
T  41032646 gttttgtagaatcgatataagaaattgtaaaatcgcaattaaaatcgatggatttt 41032701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 272 - 411
Target Start/End: Original strand, 41032661 - 41032800
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 371  Q
    |||||||||| |||||||| |||| ||||| ||||||||||  ||||||||| |||||||||||||||||||||   ||||||||||||| || ||||||    
T  41032661 tataagaaattgtaaaatcgcaattaaaatcgatggattttgcctattttagaattctactatggatttgagtcgttgaaggtgaagaaaatcgcaaaat 41032760  T
Q  372 cctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||| ||| ||  |||||||||| ||||||||||||||||    
T  41032761 cctgaattctacgatttaagtcgagattttgacaacaatg 41032800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 58 - 175
Target Start/End: Original strand, 17197306 - 17197423
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    |||| |||||||||| ||||||||||| |||| |||||| |||||||||||  | ||||||||||||||  |||||| ||||||||||||||| ||||||    
T  17197306 ggttatcaaaatcgggactttacttcaagtcgaaagggagtagcaaaatcggaactcgtaaaatcgcaactaaaatcgaaggattttactcaaggacttt 17197405  T
Q  158 tgtagaatcgatctagga 175  Q
    ||||||||| || |||||    
T  17197406 tgtagaatcaatgtagga 17197423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 277 - 411
Target Start/End: Original strand, 17055995 - 17056129
Alignment:
Q  277 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 376  Q
    |||||||||||||| |||||||||| ||||||||||   |||||||  |||||||||||||| ||||||   ||||||| ||||| |  |||||||||||    
T  17055995 gaaatcgtaaaatcgcaatcaaaatcgatggattttacttattttaaaattctactatggatctgagtcgttgaaggtggagaaaattgcaaaatcctgg 17056094  T
Q  377 attttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||| |||||| || |||||||||| ||||||    
T  17056095 attttaggatttaaatcaggattttgactacaatg 17056129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 54 - 192
Target Start/End: Complemental strand, 30619296 - 30619160
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||| | ||| |||||||||| ||| ||| ||||||||||| | ||||||| ||||||  |||||| |||||||||||||||  |    
T  30619296 ccaaggttgtcaaaatcgggatttt-cttcaggtcgaaagagaagagcaaaatcgacaatcgtaaa-tcgcaacaaaaatcgaaggattttactcaacta 30619199  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaat 192  Q
    |||||||||||||||| |   |||||||||||| |||||    
T  30619198 cttttgtagaatcgatatgaaaaattgtaaaatcgcaat 30619160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 335 - 410
Target Start/End: Complemental strand, 30619150 - 30619075
Alignment:
Q  335 ggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||||   ||||||||||||| || |||||||||||||||||| ||||||||||||||||||||||||||    
T  30619150 ggatttgagtcgttgaaggtgaagaaaatcgcaaaatcctggattttaggatttaagtcgggattttgacaacaat 30619075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 58 - 169
Target Start/End: Original strand, 12002638 - 12002747
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    ||||||||||||||| |||||| || | |||| |||||| ||||||||| | || ||  |||||| |||| |||||| |||||||||||||| |||||||    
T  12002638 ggttgtcaaaatcgggactttaatttaagtcgaaagggagtagcaaaattgggactc--aaaatcacaataaaaatcgaaggattttactcatagacttt 12002735  T
Q  158 tgtagaatcgat 169  Q
    ||||||||||||    
T  12002736 tgtagaatcgat 12002747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 315 - 410
Target Start/End: Original strand, 14074404 - 14074499
Alignment:
Q  315 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||| ||||||||| ||||||||||||   |||  ||||||||||| |||||||||  ||||||| ||||||| ||||||||||||||||||    
T  14074404 ctattttaagattctactctggatttgagtcgttgaacatgaagaaagtcgcaaaatcctacattttaggatttaagacgggattttgacaacaat 14074499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 91 - 165
Target Start/End: Complemental strand, 16434828 - 16434754
Alignment:
Q  91 aagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaat 165  Q
    ||||||||||||||||||| | ||||||||| |||||||||||| ||||||||||||| |  |||||||||||||    
T  16434828 aagggaatagcaaaatcgaaaatcgtaaaattgcaatcaaaatcgaaggattttactcgacaacttttgtagaat 16434754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 306 - 411
Target Start/End: Original strand, 18337547 - 18337651
Alignment:
Q  306 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 405  Q
    |||||||  ||||||| || |||| |||||||||||||||   ||||||||| |||||  ||||||||||||||||||  | ||||||||||||||||||    
T  18337547 ggattttgcctattttggggttctgctatggatttgagtcgttgaaggtgaataaagttgcaaaatcctggattttag-gtataagtcgggattttgaca 18337645  T
Q  406 acaatg 411  Q
    ||||||    
T  18337646 acaatg 18337651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 150
Target Start/End: Original strand, 27502129 - 27502224
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaa 150  Q
    |||||||||||||||||| | ||||||||| |||   |  ||||||||||| ||||| || |||||| |||||||||||| |||||||||||||||    
T  27502129 caaggttgtcaaaatcgggaatttacttcaagtcaacatagaatagcaaaaccgagactcataaaattgcaatcaaaatcgaaggattttactcaa 27502224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 79 - 169
Target Start/End: Complemental strand, 22789514 - 22789424
Alignment:
Q  79 acttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgat 169  Q
    ||||||||||  |||||| ||| |||||||  | |||||||||| |||||||||||||||||||||||| |  |||||||||||| |||||    
T  22789514 acttcaggtcaaaagggattagaaaaatcgcaaatcgtaaaatcacaatcaaaatcaaaggattttactaatggacttttgtagactcgat 22789424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 108
Target Start/End: Original strand, 9954770 - 9954823
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcg 108  Q
    |||||||||||||||||| ||||||||| |||||| ||||||||||||||||||    
T  9954770 caaggttgtcaaaatcgggactttacttaaggtcgaaagggaatagcaaaatcg 9954823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 349 - 411
Target Start/End: Original strand, 34478838 - 34478900
Alignment:
Q  349 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||||||||||||   ||||||  ||||||||||||||||| |||||||||    
T  34478838 gaaggtgaagaaagtcacaaaatcccaaattttaagatttaagtcgggattttaacaacaatg 34478900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 62 - 165
Target Start/End: Complemental strand, 8773613 - 8773513
Alignment:
Q  62 gtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgta 161  Q
    ||||||||||  ||||||||| | |||| |||||||||||| |||   || ||||||||||||||| |||||  |||||||||||| || || |||||||    
T  8773613 gtcaaaatcgagactttacttaaagtcgaaagggaatagcagaat---gactcgtaaaatcgcaattaaaattgaaggattttacttaaggatttttgta 8773517  T
Q  162 gaat 165  Q
    ||||    
T  8773516 gaat 8773513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 322 - 410
Target Start/End: Original strand, 12800622 - 12800710
Alignment:
Q  322 aggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||| |||||| ||||||||||   ||| ||||||||||||  ||||||||  ||||||| |||||||| |||||||| ||||||||    
T  12800622 aggattttactatagatttgagtcgttgaatgtgaagaaagtcgtaaaatcctaaattttaggatttaagttgggattttcacaacaat 12800710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 96 - 145
Target Start/End: Original strand, 9321550 - 9321599
Alignment:
Q  96 aatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggatttta 145  Q
    |||||||||||||  | |||||||||||||||||||||| ||||||||||    
T  9321550 aatagcaaaatcggaactcgtaaaatcgcaatcaaaatcgaaggatttta 9321599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 136
Target Start/End: Original strand, 12002751 - 12002792
Alignment:
Q  95 gaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaa 136  Q
    |||||||||||||| || ||||||||||||||||||||||||    
T  12002751 gaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaa 12002792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 227 - 268
Target Start/End: Original strand, 12002818 - 12002859
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgactta 268  Q
    ||||||||||||||||||| | ||||||||||||||||||||    
T  12002818 ctaaatatatgttataaattgcatatagtcataaatgactta 12002859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 54 - 129
Target Start/End: Original strand, 13276032 - 13276104
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatca 129  Q
    ||||| ||||||||||||| ||||||||   ||||| ||| |||||||||||||  || |||||||||||||||||    
T  13276032 ccaagattgtcaaaatcgggactttact---ggtcgaaagagaatagcaaaatcaggactcgtaaaatcgcaatca 13276104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 349 - 407
Target Start/End: Original strand, 27917520 - 27917578
Alignment:
Q  349 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaac 407  Q
    |||||| || ||| || ||||||||| ||||| || |||||||||||||||||||||||    
T  27917520 gaaggtaaataaaatcgcaaaatcctagatttcagaatttaagtcgggattttgacaac 27917578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 366 - 411
Target Start/End: Complemental strand, 47785836 - 47785791
Alignment:
Q  366 caaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||| ||||||| ||||| || ||||||||||||||||||    
T  47785836 caaaatcctgaattttaggatttatgttgggattttgacaacaatg 47785791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 359 - 407
Target Start/End: Original strand, 12003241 - 12003289
Alignment:
Q  359 aaagtcacaaaatcctggattttagtatttaagtcgggattttgacaac 407  Q
    |||||||||||| |||| ||||||  | |||||||||||||||||||||    
T  12003241 aaagtcacaaaaacctgaattttaaaacttaagtcgggattttgacaac 12003289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 229 - 273
Target Start/End: Original strand, 27917319 - 27917363
Alignment:
Q  229 aaatatatgttataaatggtatatagtcataaatgacttagttta 273  Q
    |||||||| |||||||| |||||||||||||||| ||| ||||||    
T  27917319 aaatatatattataaatcgtatatagtcataaataactcagttta 27917363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0186 (Bit Score: 183; Significance: 8e-99; HSPs: 1)
Name: scaffold0186
Description:

Target: scaffold0186; HSP #1
Raw Score: 183; E-Value: 8e-99
Query Start/End: Original strand, 54 - 411
Target Start/End: Complemental strand, 8797 - 8442
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||| |||||||||| |||||||||||||||| ||||||||| ||||||||  | |||||||||||||||||||||  |||||||||||||||  |    
T  8797 ccaaggttctcaaaatcgggactttacttcaggtcgaaagggaataacaaaatcggaactcgtaaaatcgcaatcaaaattgaaggattttactcaagta 8698  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
     ||| ||||||||||| |||||||||||||||| ||||| |||||| ||||||||||||||          ||||||||||||| |||||||||||||||    
T  8697 ttttcgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaa--aaaaataatactaaatatatggtataaatggtatata 8600  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||  |||||||||   |||||| ||||||||| || ||||| ||||   |||||    
T  8599 gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcaatggattttgcttattttgggattctacaatagatttaagtcgttgaagg 8500  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||| ||||||| |||||||||| |||||||| ||||||||||||||||||    
T  8499 tgaagaaagtcgcaaaatcgtggattttaggatttaagtagggattttgacaacaatg 8442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 179; Significance: 2e-96; HSPs: 62)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 179; E-Value: 2e-96
Query Start/End: Original strand, 56 - 410
Target Start/End: Original strand, 44944620 - 44944978
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| |||||||||||| ||| |||| |||||||||  || || ||||||||||||||| |||||| ||  |||||||| || ||||    
T  44944620 aaggttgtcaaaatcgggactttacttcagatcgaaaggaaatagcaaatgcgggactcgtaaaatcgcaattaaaatcgaacaattttacttaaggact 44944719  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    |||||||||||||| || ||||||||||||| ||||| |||||| || || ||||||||          |||||||||||||||||||||||||||||||    
T  44944720 tttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatagactttaccaaaaaataataatactaaatatatgttataaatggtatatagt 44944819  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag--- 352  Q
    |||||||||||||||||||||||||| |||||||| |||||||||| ||||||||||  |||||||||||||||||||||||||||| ||   ||||       
T  44944820 cataaatgacttagtttataagaaatagtaaaatcccaatcaaaatcgatggattttgactattttaggattctactatggatttgaatcgttgaaggtg 44944919  T
Q  353 -gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
     |||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  44944920 agtgaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 44944978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 56 - 409
Target Start/End: Complemental strand, 5058882 - 5058530
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| |||||||||||| ||  ||||||||||||||||||  ||||||||||| |||||||||||| |||||||||| |||| || |    
T  5058882 aaggttgtcaaaatcgggactttacttcagatcaaaagggaatagcaaaatcggaattcgtaaaattgcaatcaaaatcgaaggattttaatcaaggaat 5058783  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    ||||| |||||||| ||  |||||||||||| ||||| |||||| ||||| ||||||||          |||||||||||||||||||||||||||||||    
T  5058782 tttgt-gaatcgatataaaaaattgtaaaatcgcaatcaaaatcgatggactttaccaaaaaataataatactaaatatatgttataaatggtatatagt 5058684  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |  |||||||  |||||||| |||||||||||||||||  |||   |||||||    
T  5058683 cataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgtaggattttgcctattttaagattctactatggatttaggtcgttgaaggtg 5058584  T
Q  356 aagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    |||||| || |||||| ||| ||||||| |||||||||||||||||||||||||    
T  5058583 aagaaaatcgcaaaattctgaattttaggatttaagtcgggattttgacaacaa 5058530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 56 - 372
Target Start/End: Complemental strand, 17811702 - 17811385
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| |||||||||||||||  |||||||||||||||||| ||||||||||||||||||||||||| || |||||||||||| ||||    
T  17811702 aaggttgtcaaaatcgggactttacttcaggtcaaaagggaatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaagattttactcaaggact 17811603  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggatttta-ccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    |||||||||||||| ||| |||||||||||| ||||| |||||| |||||||||| ||||          || ||||||||| ||||||||||||||||     
T  17811602 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaatattaatattaaatatattttataaatggtatataa 17811503  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    | |||||||||||||||||||||||||||||||||| |||||||||| ||| |||||| |||||||||  |||||||||||||||||||||   ||||||    
T  17811502 ttataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatcgattttgtctattttaaaattctactatggatttgagtcgttgaaggt 17811403  T
Q  355 gaagaaagtcacaaaatc 372  Q
    ||| ||||||||||||||    
T  17811402 gaaaaaagtcacaaaatc 17811385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 175; E-Value: 5e-94
Query Start/End: Original strand, 63 - 411
Target Start/End: Complemental strand, 27221762 - 27221417
Alignment:
Q  63 tcaaaatcggaactttacttc-aggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgta 161  Q
    |||||||||| |||||||||  |||||| ||| | |||||||||||| ||||||||||||||||||||||||| |||||||||||||  |||||||||||    
T  27221762 tcaaaatcgggactttacttttaggtcgaaagagtatagcaaaatcgggattcgtaaaatcgcaatcaaaatcgaaggattttactcggagacttttgta 27221663  T
Q  162 gaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaa 261  Q
    |||||||| |||||||||||||||| |||||||||||| |  |||| ||||||           |||| |||||||||||||||||||||||||||||||    
T  27221662 gaatcgatgtaggaaattgtaaaatcgcaattaaaatcgactgattgtaccaaaaaaaaa----actatatatatgttataaatggtatatagtcataaa 27221567  T
Q  262 tgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaa 361  Q
    ||||||||||||||||||||||||||||| |||||||||| ||||||||||  | |||||| |||||||||||| |||||||||   |||| ||||||||    
T  27221566 tgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgccaattttaagattctactatgtatttgagtcgttgaagatgaagaaa 27221467  T
Q  362 gtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||| |||||||||| ||||||| |||||||| |||||||| |||||||||    
T  27221466 gtcgcaaaatcctgaattttagaatttaagttgggattttaacaacaatg 27221417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 116 - 411
Target Start/End: Original strand, 24725307 - 24725607
Alignment:
Q  116 taaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc--- 212  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||||| ||||| |||||| ||||||||||||       
T  24725307 taaaatcgcaatcaaaatcaaaggattttactcaaggacttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaa 24725406  T
Q  213 --aacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatt 310  Q
      ||          |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  24725407 aaaaaataaaataatactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtcaaatcgtaatcaaaattgatggatt 24725506  T
Q  311 ttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||  |||||||  |||||||||||||||||||||    ||||||||||||||||  |||||| |||||||||| ||||||||| ||||||||||||||||    
T  24725507 ttgcctattttgcgattctactatggatttgagttgttgaaggtgaagaaagtcgtaaaatcttggattttaggatttaagtctggattttgacaacaat 24725606  T
Q  411 g 411  Q
    |    
T  24725607 g 24725607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 165; E-Value: 5e-88
Query Start/End: Original strand, 55 - 410
Target Start/End: Complemental strand, 4247711 - 4247356
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||| |||||||||| || ||||||||||| |||| |||||||||  ||||| | |||||||||||||||||||||| |||||||||||||||||| ||     
T  4247711 caagattgtcaaaattgggactttacttcaagtcgaaagggaatacaaaaattgggattcgtaaaatcgcaatcaaattcaaaggattttactcaaggat 4247612  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| || |||||  |||||| ||||| |||||| |||||||||||| |          |||||||||||||||| ||||| |||||||    
T  4247611 ttttgtagaatcgatataagaaatcataaaatcgcaatcaaaatcgatggattttacctaaaaaaaataatactaaatatatgttacaaatgatatatag 4247512  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggt 354  Q
    |||||||||||||||||||||||||||| ||||||| |||||||||| |||| |||||  ||||||| |||||||||||||||||| |||    ||| ||    
T  4247511 tcataaatgacttagtttataagaaatcataaaatcgcaatcaaaatcgatgaattttgcctattttgggattctactatggatttaagttgttgaaagt 4247412  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||||||||| ||||||||||| ||||||| |||||| | |||||||||||||||||    
T  4247411 gaagaaagttacaaaatcctgaattttaggatttaaattgggattttgacaacaat 4247356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 56 - 411
Target Start/End: Complemental strand, 14055610 - 14055250
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||||  ||| |||||||||| ||| ||  ||||||||||| | | |||||||||||| ||||||| |||||||||||||||  |||    
T  14055610 aaggttgtcaaaatcggat-tttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactact 14055512  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn------tactaaatatatgttataaatggta 249  Q
    ||||||||| |||| || ||||||| ||||| ||||| ||||||||||||||||||||||               || ||||||||||||||||||||||    
T  14055511 tttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaacaaaaaaaaaagataatattaaatatatgttataaatggta 14055412  T
Q  250 tatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggg 349  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||  ||||||||| |||||||||| ||||||||||   |    
T  14055411 tatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttg 14055312  T
Q  350 aaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||||||| ||||||| |||||||||| || ||||| |||||||| |||||||||    
T  14055311 aaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14055250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 156; E-Value: 1e-82
Query Start/End: Original strand, 56 - 411
Target Start/End: Complemental strand, 14365638 - 14365278
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||||  ||| |||||||||| ||| ||  ||||||||||| | | |||||||||||| ||||||| |||||||||||||||  |||    
T  14365638 aaggttgtcaaaatcggat-tttgcttcaggtcgaaagagatgagcaaaatcgacaatggtaaaatcgcaaccaaaatcgaaggattttactcaactact 14365540  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn------tactaaatatatgttataaatggta 249  Q
    ||||||||| |||| || ||||||| ||||| ||||| ||||||||||||||||||||||               || ||||||||||||||||||||||    
T  14365539 tttgtagaaacgatataagaaattgcaaaatcgcaatcaaaatcaatggattttaccaacaaaaaaaaaagataatattaaatatatgttataaatggta 14365440  T
Q  250 tatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggg 349  Q
    |||||||||||||||||||||||||||||| |||||||||| ||||||||||  |||||||||  ||||||||| |||||||||| ||||||||||   |    
T  14365439 tatagtcataaatgacttagtttataagaagtcgtaaaatcgcaatcaaaatctatggattttgcctattttagaattctactatagatttgagtcgttg 14365340  T
Q  350 aaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||||||||||||| ||||||| |||||||||| || ||||| |||||||| |||||||||    
T  14365339 aaggtgaagaaagtcgcaaaatcttggattttaggatataagtggggattttcacaacaatg 14365278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 153; E-Value: 7e-81
Query Start/End: Original strand, 58 - 404
Target Start/End: Original strand, 20570662 - 20571002
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    ||||||||||||||| ||| |||||||||| | ||||||||| |||||| |||| || ||||||||||||||||||  || |||||||||||| ||||||    
T  20570662 ggttgtcaaaatcgggactctacttcaggttgaaagggaataacaaaattgagactcataaaatcgcaatcaaaattgaaagattttactcaaggacttt 20570761  T
Q  158 tgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtca 257  Q
    |||||||||||| || |||||| ||||||  |||| |||||| ||||| ||||||||          |||||||||||||||||||||||||||||||||    
T  20570762 tgtagaatcgatataagaaattataaaatcacaatcaaaatcgatggactttaccaaaaaagaataatactaaatatatgttataaatggtatatagtca 20570861  T
Q  258 taaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaa 357  Q
    ||||||||||| ||||||||||||||||||||  |||||||||| |||||||||| ||||||||  ||||||||||| |||||       || || ||||    
T  20570862 taaatgacttattttataagaaatcgtaaaattgcaatcaaaatcgatggattttgtctatttttagattctactatagattt------aggtagatgaa 20570955  T
Q  358 gaaagtcacaaaatcctggattttagtatttaagtcgggattttgac 404  Q
    ||||||||||||||| ||||||| || ||||||||||||| ||||||    
T  20570956 gaaagtcacaaaatcttggatttcagaatttaagtcgggagtttgac 20571002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 113 - 411
Target Start/End: Original strand, 8329876 - 8330175
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||| ||| || ||||| ||||||| ||||| |||||||||||||||||||    
T  8329876 tcgtaaaatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaattgcaatcaaaatcaatggattttacc 8329975  T
Q  213 aacnnnnnnnnntactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattt 311  Q
    ||          || ||| ||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||| |||| |||||  ||| ||||    
T  8329976 aaaaaaaataaataataagtatatgttataaaatggtatatagtcataaatgacttagtttataaaaaatcgtaaaatcgcaattaaaatcaatgaattt 8330075  T
Q  312 tttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    || ||||||| |||||||||||||||||||| ||   |||||||||||||||| ||||||| || ||||||| ||||| ||| |||||||||||||||||    
T  8330076 ttcctattttgggattctactatggatttgaatcgttgaaggtgaagaaagtcgcaaaatcatgaattttagaatttaggtcaggattttgacaacaatg 8330175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 56 - 410
Target Start/End: Complemental strand, 5715635 - 5715290
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| ||||||||    |||| |||| ||||| ||||||| || |||||||||||||||||||||| | ||||||||||||| ||||    
T  5715635 aaggttgtcaaaatcgggactttact----gtcgaaaggaaatagaaaaatcgggactcgtaaaatcgcaatcaaaatcgagggattttactcaaggact 5715540  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    |||||||||||||| ||||||||| |||||| ||||| |||||| ||| ||||||||||           | | |||||||||||||||||||||||| |    
T  5715539 tttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatgaattttaccaaaaaaaaa----aatgaatatatgttataaatggtatataat 5715444  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
    ||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||   |||||| | ||||||||||| |||| |||    |||||||    
T  5715443 cataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatgaattttgcttattttggaattctactatgaatttaagttgttgaaggtg 5715344  T
Q  356 aagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
     | |||||| |||||||||| ||||||| ||||||||||||||||||||||||||    
T  5715343 ta-aaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaat 5715290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 113 - 408
Target Start/End: Original strand, 8346363 - 8346660
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    |||||| |||||||||||||||||||||||||||||||  ||||||||||||| ||| || |||||  ||||||  |||| | |||||||||||||||||    
T  8346363 tcgtaatatcgcaatcaaaatcaaaggattttactcaactacttttgtagaattgatataagaaatcataaaatctcaatcataatcaatggattttacc 8346462  T
Q  213 aacnnnnnnnnn-tactaaatatatgttataaa-tggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatt 310  Q
    ||           |||||||||||||||||||| || ||||||| |||| |||||||||||||||||||||||||||||| |||| ||||| ||||||||    
T  8346463 aaaaaaataataatactaaatatatgttataaaatgatatatagacatagatgacttagtttataagaaatcgtaaaatcgcaattaaaatcgatggatt 8346562  T
Q  311 ttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaaca 408  Q
    ||| ||||||| |||||||||||||||||||||||   |||||||||||||||| |||||||||  |||||| |||||| ||| ||||||||||||||    
T  8346563 tttcctattttgggattctactatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctaaattttaatatttaggtcaggattttgacaaca 8346660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 129; E-Value: 1e-66
Query Start/End: Original strand, 59 - 413
Target Start/End: Original strand, 8343580 - 8343932
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    ||||| |||||| ||| ||| |||||||||| ||| ||| | |||||| || | ||||||||  |||||||||||| ||| |||||||||||  ||||||    
T  8343580 gttgttaaaatcagaattttgcttcaggtcgaaagagaagaacaaaattgacaatcgtaaaaatgcaatcaaaatcgaagtattttactcaactactttt 8343679  T
Q  159 gtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaa-tggtatatagtca 257  Q
    ||||||| ||| ||  |||| ||||||| ||||| ||| |||||||||||||  ||          |||||||||||  ||||||| ||||||||| |||    
T  8343680 gtagaattgatataaaaaatcgtaaaatcgcaatcaaagtcaatggattttaaaaa---ataataatactaaatataacttataaaatggtatataatca 8343776  T
Q  258 taaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaa 357  Q
    || |||||||||||||||||||||||||||||| |||| |||||||||||||||||  |||||| |||||||||||||||||||||||   |||||||||    
T  8343777 tagatgacttagtttataagaaatcgtaaaatcgcaattaaaattgatggatttttcatattttgggattctactatggatttgagtcgttgaaggtgaa 8343876  T
Q  358 gaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||||| |||||||| ||||||||| ||||| | |  ||||||||||||||||||    
T  8343877 gaaagtcgcaaaatccaggattttaggatttaggccaagattttgacaacaatggt 8343932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 118; E-Value: 5e-60
Query Start/End: Original strand, 225 - 410
Target Start/End: Original strand, 24990015 - 24990200
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagg 324  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||    
T  24990015 tactaaatatatgttataaatagtatatagtcataaatgatttagtttataagaaatcgtaaaattgcaatcaaaatcgatggattttgcctattttagg 24990114  T
Q  325 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||||||||||||||   | |||| |||||||||||||||||||  ||||| | ||||||||||| ||||||||||||||    
T  24990115 attctactatggatttgagtcgttggaggtaaagaaagtcacaaaatcctaaatttttggatttaagtcggaattttgacaacaat 24990200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 107; E-Value: 2e-53
Query Start/End: Original strand, 227 - 413
Target Start/End: Original strand, 26281256 - 26281441
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggat 326  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||| ||||||||||   |||||| | ||    
T  26281256 ctaaatataagttataaatggtatatagtcataaatgacttagtttataagaaatcgttaaatcgcaa-caaaatcgatggattttgcttattttggaat 26281354  T
Q  327 tctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||| |||||||||||||   |||||||||||||||| |||||||||| ||||||  ||||||||||| |||||||||||||||||    
T  26281355 tctacaatggatttgagtcgttgaaggtgaagaaagtcgcaaaatcctgaattttatgatttaagtcggaattttgacaacaatggt 26281441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 100; E-Value: 3e-49
Query Start/End: Original strand, 55 - 401
Target Start/End: Complemental strand, 11325333 - 11324988
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| || |  || ||||| |||  ||| ||| ||||||||||| | |||||||||||||| |||| |  |||| ||||||||||  ||    
T  11325333 caaggttgtcaaaattgggatcttgcttcacgtcaaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaatttcaagggttttactcaactac 11325234  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaat----ggtat 250  Q
    || |||| ||| ||| ||| ||||||||||||  |||| |||||| ||||||||||||||           |||||||||  |||||||||    |||||    
T  11325233 ttctgtaaaattgatatag-aaattgtaaaattacaatcaaaatcgatggattttaccaaaaaaaaaaaa-actaaatat--gttataaataattggtat 11325138  T
Q  251 atagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcaggga 350  Q
    ||||||||||||||||||||||||||||||||||||| || ||||||||||| ||| |||||  ||||||||| |||||| ||||||||||||||   ||    
T  11325137 atagtcataaatgacttagtttataagaaatcgtaaattcgcaatcaaaatt-atgaattttgcctattttagaattctattatggatttgagtcgttga 11325039  T
Q  351 aggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggatttt 401  Q
    ||||||||||| || ||||||| || ||||||| |||||||||||||||||    
T  11325038 aggtgaagaaaatcccaaaatcatgaattttaggatttaagtcgggatttt 11324988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 24989549 - 24989706
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||| ||||||||| |||||| ||||||||| |||||||| || ||||||||| |||||||||||| |||||||||||| || ||||    
T  24989549 aaggttgtcaaaatcgggactttactttaggtcgaaagggaataacaaaatcgggactcgtaaaatggcaatcaaaatcgaaggattttact-aaggact 24989647  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    |||||||||||||| ||||||||| |||||| ||||| |||||| ||||||||||||||    
T  24989648 tttgtagaatcgatataggaaattataaaatcgcaatcaaaatcgatggattttaccaa 24989706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 91; E-Value: 7e-44
Query Start/End: Original strand, 257 - 411
Target Start/End: Original strand, 7730319 - 7730472
Alignment:
Q  257 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 356  Q
    |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||| |||||||||||     |||||||    
T  7730319 ataaatgatttagtttataagaaatcgtaaaatctcaatcaaaatcgatggatttttcctattttggaattctactgtggatttgagttgttaaaggtga 7730418  T
Q  357 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||| ||||| |||||||||||| ||||||||| |||||||||||||||||    
T  7730419 agaaagtcgcaaaa-cctggattttaggatttaagtcaggattttgacaacaatg 7730472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 120 - 410
Target Start/End: Complemental strand, 6917068 - 6916786
Alignment:
Q  120 atcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnn 219  Q
    ||||||||||||||  |||||||||||||||  |||||  || ||||||| || |||||| |||||| ||||| |||||| ||| |||||||||||        
T  6917068 atcgcaatcaaaattgaaggattttactcaactactttcata-aatcgatataagaaattataaaattgcaatcaaaatcgatgaattttaccaacaaaa 6916970  T
Q  220 nnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctatt 319  Q
         || |||||||||||||||| ||| ||| |||||||||||||||| ||||||||||||||||||||| |||||||||  ||||||||||  |  ||    
T  6916969 aaatatattaaatatatgttataactggaata-agtcataaatgacttaatttataagaaatcgtaaaatcgcaatcaaaaccgatggattttaac--tt 6916873  T
Q  320 ttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||| ||||||||||| ||||||||||||  |    || ||| || |||||||||  |||| |  |||||| |||||||||||||||||||    
T  6916872 ttagaattctactatgaatttgagtcaggtga----aaaaaaatcgcaaaatcctaaatttcaagatttaaatcgggattttgacaacaat 6916786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 257 - 411
Target Start/End: Original strand, 9685220 - 9685374
Alignment:
Q  257 ataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtga 356  Q
    |||||||||||||||||||||||||| ||||||| |||| ||||| |||||||||| ||||||||   |||||| ||||||||||||||   ||||||||    
T  9685220 ataaatgacttagtttataagaaatcataaaatcgcaattaaaatcgatggattttgtctattttgaaattctaatatggatttgagtcgttgaaggtga 9685319  T
Q  357 agaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    | |||||| |||||||||  ||||||| || ||||||| ||||||||||||||||    
T  9685320 aaaaagtcgcaaaatcctaaattttaggatataagtcgagattttgacaacaatg 9685374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 79; E-Value: 9e-37
Query Start/End: Original strand, 248 - 410
Target Start/End: Original strand, 22687631 - 22687793
Alignment:
Q  248 tatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcag 347  Q
    ||||||||||| || |  ||||||| ||||||||||||||||| |||||||||| ||||||||||  ||||||| ||||||| | ||||||||||||       
T  22687631 tatatagtcatcaaggttttagtttgtaagaaatcgtaaaatcgcaatcaaaatcgatggattttgcctattttgggattctgcgatggatttgagttgt 22687730  T
Q  348 ggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
     |||| ||||||||||| |||| ||||| ||||||| ||||||||||||||||||||||||||    
T  22687731 tgaagttgaagaaagtcgcaaattcctgaattttaggatttaagtcgggattttgacaacaat 22687793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 286 - 403
Target Start/End: Complemental strand, 8571367 - 8571250
Alignment:
Q  286 aaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagta 385  Q
    ||||| |||||||||| ||||| |||| ||||||||||||||||||||||||||||||||    ||||||||||||||| |||||||||||||||||  |    
T  8571367 aaatcgcaatcaaaatcgatggtttttctctattttaggattctactatggatttgagtcgttaaaggtgaagaaagtcgcaaaatcctggattttatga 8571268  T
Q  386 tttaagtcgggattttga 403  Q
    ||||||||||||||||||    
T  8571267 tttaagtcgggattttga 8571250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 272 - 410
Target Start/End: Complemental strand, 11326524 - 11326386
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 371  Q
    |||| ||||| |||||||| |||||||||| ||| ||||||  |||||||| ||||||||||||||||| ||||   |||||||||||||||| ||||||    
T  11326524 tataggaaattgtaaaatcgcaatcaaaatcgatagattttgcctattttaagattctactatggattttagtcgctgaaggtgaagaaagtcgcaaaat 11326425  T
Q  372 cctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||  ||||||| |||||||| |||||||||||||||||    
T  11326424 cctaaattttaggatttaagttgggattttgacaacaat 11326386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 71; E-Value: 6e-32
Query Start/End: Original strand, 55 - 209
Target Start/End: Complemental strand, 11326638 - 11326484
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||| |||||||| ||||||| | ||| |||||||||||| | || || ||||||| ||||||||||  ||| ||||||||||| |||    
T  11326638 caaggttgtcaaaatcagaactttatttcaggtggaaagagaatagcaaaattgggactcttaaaatcacaatcaaaattgaagtattttactcaaggac 11326539  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggatttt 209  Q
    |||||| ||||| || |||||||||||||||| ||||| |||||| || ||||||    
T  11326538 ttttgtggaatcaatataggaaattgtaaaatcgcaatcaaaatcgatagatttt 11326484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 272 - 411
Target Start/End: Complemental strand, 39182397 - 39182259
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaat 371  Q
    |||||||||| |||||||| ||| |||||| ||||||||||  ||||||| |||||||||||||||||| ||||   |||||||||| ||||| ||||||    
T  39182397 tataagaaattgtaaaatcgcaaccaaaatcgatggattttgcctattttgggattctactatggatttcagtcgttgaaggtgaag-aagtcgcaaaat 39182299  T
Q  372 cctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||| |||||||| ||||||||| |||||||| ||||||||    
T  39182298 cctagattttaggatttaagtcaggattttgtcaacaatg 39182259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 54 - 209
Target Start/End: Complemental strand, 39182512 - 39182357
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||  | ||| |||||| ||  ||| ||| || |||||||| | |||||||||||||| ||||||| |||||||||||||||  |    
T  39182512 ccaaggttgtcaaaatcgtgattttgcttcagttccaaagagaagagaaaaatcgacaatcgtaaaatcgcaaccaaaatcgaaggattttactcaacta 39182413  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggatttt 209  Q
    |||||||||||||||| || ||||||||||||| ||||  |||||| |||||||||    
T  39182412 cttttgtagaatcgatataagaaattgtaaaatcgcaaccaaaatcgatggatttt 39182357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 58 - 175
Target Start/End: Complemental strand, 8304438 - 8304321
Alignment:
Q  58 ggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttt 157  Q
    ||||||||||||||  ||||||||||| |||| ||| || ||||||||||| || |||||||||| ||||||||||| ||||||||||||||| ||||||    
T  8304438 ggttgtcaaaatcgagactttacttcaagtcgaaagagagtagcaaaatcgcgactcgtaaaatcacaatcaaaatcgaaggattttactcaaggacttt 8304339  T
Q  158 tgtagaatcgatctagga 175  Q
    |||||||| ||| |||||    
T  8304338 tgtagaattgatatagga 8304321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 55 - 413
Target Start/End: Original strand, 26617251 - 26617608
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| |||| ||| |||||||||  | |  ||| |||||| ||  | ||| ||||||||||  ||| |||||||||||| |||||  |     
T  26617251 caaggttgtcaaaattggaattttgcttcaggtcaaatgataattgcaaaaccgccaatcgaaaaatcgcaactaaattcaaaggattttgctcaattat 26617350  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||  ||| ||  |||||||||||| ||||| |||||| || |||||||| ||          ||||||||||||||||||||||    ||||    
T  26617351 ttttgtagaaaggatataaaaaattgtaaaatcgcaatcaaaatcgattgattttacaaa-aaaaaataatactaaatatatgttataaatg----atag 26617445  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggatttt--ttctattttaggattctac--tatggatttgagtcaggga 350  Q
    |||||||||||||||| || ||||  |||||||||| |||||||||| ||| ||||||   | |||||||| |||||||  |||| ||||  |||   ||    
T  26617446 tcataaatgacttagtctacaagatctcgtaaaatcgcaatcaaaatcgatagattttgcctatattttagaattctactatatgaatttatgtcgttga 26617545  T
Q  351 aggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggt 413  Q
    ||||||| |||||| |||||||||| ||||||| ||| ||||| | ||||| | |||||||||    
T  26617546 aggtgaaaaaagtcgcaaaatcctgaattttaggattaaagtcagaattttcaaaacaatggt 26617608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 252 - 390
Target Start/End: Original strand, 27509914 - 27510052
Alignment:
Q  252 tagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaa 351  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||  |||||||   |||||||||| ||||||| ||   | |    
T  27509914 tagtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattgatgaattttgcctatttttaaattctactatagatttgaatcgttgga 27510013  T
Q  352 ggtgaagaaagtcacaaaatcctggattttagtatttaa 390  Q
     ||||||||| || |||||||||  ||||||| ||||||    
T  27510014 tgtgaagaaaatcgcaaaatcctttattttagaatttaa 27510052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 57 - 186
Target Start/End: Original strand, 9685070 - 9685199
Alignment:
Q  57 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactt 156  Q
    ||||||| || ||| | |||||||||| ||||| || |||||||||||||| ||| ||||||||||||||| |||||| ||||||||||||| | |||||    
T  9685070 aggttgtaaagatccggactttacttctggtcgaaaaggaatagcaaaatcaagactcgtaaaatcgcaattaaaatcgaaggattttactcgaggactt 9685169  T
Q  157 ttgtagaatcgatctaggaaattgtaaaat 186  Q
    || |||||||||| ||| ||||| ||||||    
T  9685170 ttatagaatcgatttagaaaattttaaaat 9685199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 25842504 - 25842625
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||| ||||||| || ||||||||||| |||| |||||| ||||||||||| || |||||||||||||||||||||   |||||||||||||   |    
T  25842504 ccaaggttatcaaaattgggactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaatcgcaatcaaaattggaggattttactcatgaa 25842603  T
Q  154 cttttgtagaatcgatctagga 175  Q
    |||||||||||||||| |||||    
T  25842604 cttttgtagaatcgatgtagga 25842625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 82 - 410
Target Start/End: Original strand, 21846248 - 21846554
Alignment:
Q  82 tcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgt 181  Q
    |||||||| ||| | | ||||||||| | | || ||||||||||| ||||||| |||||||||| ||||  |||||| |||||||||| || ||||| ||    
T  21846248 tcaggtcgaaagaggagagcaaaatcaaaaatcctaaaatcgcaaccaaaatcgaaggattttaatcaactacttttatagaatcgatataagaaatcgt 21846347  T
Q  182 aaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaat 281  Q
    |||||  |||| |||||  |||||||||||| |          || ||||||||||||||||||| |||||||||||||||||||||                 
T  21846348 aaaatcacaatcaaaattgatggattttaccca-aataaataatattaaatatatgttataaatgatatatagtcataaatgactta------------- 21846433  T
Q  282 cgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggatttt 381  Q
           || |||||||||| ||| ||||||  || |||||| |||||||||||||| ||||||   ||| ||||| |||||| |||||||||| |||||    
T  21846434 -------tcgcaatcaaaatcgattgattttacctgttttagaattctactatggatgtgagtcgttgaatgtgaa-aaagtcgcaaaatcctgaatttt 21846525  T
Q  382 agtatttaagtcgggattttgacaacaat 410  Q
    || ||||||||||||||||||||||||||    
T  21846526 agaatttaagtcgggattttgacaacaat 21846554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 4575083 - 4574965
Alignment:
Q  57 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactt 156  Q
    ||||||||||||| |  | ||| |||||||| | |||||||||| |||||| | | |||||||||||||||||||||||||| ||| |||||||  ||||    
T  4575083 aggttgtcaaaattgagatttttcttcaggttgaaagggaatagtaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaagaattctactcaactactt 4574984  T
Q  157 ttgtagaatcgatctagga 175  Q
    ||||||||||||| |||||    
T  4574983 ttgtagaatcgatatagga 4574965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 273
Target Start/End: Original strand, 26565323 - 26565540
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||||||||| || |  || ||||||||   ||||||| | ||||| ||| | ||||||||||| |||||||||| |||||||||||||||  |||    
T  26565323 aaggttgtcaaaattgggatctttcttcaggttaaaagggaagaacaaaaacgaaaatcgtaaaatcgtaatcaaaatcgaaggattttactcaactact 26565422  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    ||||||||||| || ||  |||| ||||||| ||||| |||||  ||||||||||||||             | |||||||||||||||  |||||||||    
T  26565423 tttgtagaatcaatataaaaaatcgtaaaattgcaatcaaaattgatggattttaccaaaacaaaaataatgttaatatatgttataaactgtatatagt 26565522  T
Q  256 cataaatgacttagttta 273  Q
    ||||||||||| ||||||    
T  26565523 cataaatgactcagttta 26565540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 56 - 178
Target Start/End: Original strand, 22687042 - 22687164
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||| |||||||| | ||| |||||| ||| ||| ||| ||||||||||||| |||||||||| ||| ||||||  ||| |||||||||||  |||    
T  22687042 aaggttgttaaaatcgggattttgcttcagatcgaaagagaagagcaaaatcgagaatcgtaaaatcacaaccaaaattgaagaattttactcaactact 22687141  T
Q  156 tttgtagaatcgatctaggaaat 178  Q
    |||||||||||||| || |||||    
T  22687142 tttgtagaatcgatataagaaat 22687164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 212
Target Start/End: Complemental strand, 8572491 - 8572336
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| || ||||||  ||| |||| |||||||||| || || | || || |||| |||||||||||||| || ||| ||| |||| |||    
T  8572491 caaggttgtcaaaattgggactttatctcaagtcgaaagggaatagtaatattgggactcttaaa-tcgcaatcaaaatcgaaagatgttaatcaaggac 8572393  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
     |||||||||| ||| ||| ||||| |||||| ||||| |||||||||||||||||||    
T  8572392 atttgtagaattgatatag-aaattataaaattgcaatcaaaatcaatggattttacc 8572336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 56 - 169
Target Start/End: Original strand, 23618204 - 23618317
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||| ||||||||   ||||||||| | || | |||||| ||||||||||| || ||  |||||||||||||||||| ||| ||||||||||| ||||    
T  23618204 aaggttatcaaaatcaagactttactttaagttgaaagggagtagcaaaatcgggactccgaaaatcgcaatcaaaatcgaagaattttactcaaggact 23618303  T
Q  156 tttgtagaatcgat 169  Q
    ||||||||||||||    
T  23618304 tttgtagaatcgat 23618317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 331 - 410
Target Start/End: Complemental strand, 30294251 - 30294175
Alignment:
Q  331 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||||||||||   ||||||||| ||| ||||||||||||||||||||| |||||||| |||||||||||||||||    
T  30294251 ctatggatttgagtc---gaaggtgaataaaatcacaaaatcctggattttaggatttaagttgggattttgacaacaat 30294175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 95 - 211
Target Start/End: Original strand, 8329793 - 8329909
Alignment:
Q  95 gaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaatta 194  Q
    ||||| |||||| || | || |||||| |||||||||||  |||||||||||||||  ||||||||||||| ||| || ||||| ||||||| ||||| |    
T  8329793 gaataacaaaattgacaatcataaaattgcaatcaaaattgaaggattttactcaactacttttgtagaattgatataagaaatcgtaaaatcgcaatca 8329892  T
Q  195 aaatcaatggattttac 211  Q
    ||||||| |||||||||    
T  8329893 aaatcaaaggattttac 8329909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 80 - 199
Target Start/End: Complemental strand, 1977878 - 1977760
Alignment:
Q  80 cttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaatt 179  Q
    |||||||||| ||| ||| || |||||||| | |||||||||||||||||||||| |||||||||||||||  | |||| |||||||||| || |||||     
T  1977878 cttcaggtcgaaagagaagagaaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaatta-ttttttagaatcgatataagaaatc 1977780  T
Q  180 gtaaaatagcaattaaaatc 199  Q
     |||||| ||||| ||||||    
T  1977779 ctaaaatcgcaatcaaaatc 1977760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 1981098 - 1981217
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||| |||||||||| ||||||||||| |||| |||||| ||| ||||| |  | ||||||||||| |||||||||| |||||  |||||||| |     
T  1981098 ccaaggttatcaaaatcgggactttacttcaagtcgaaagggattagaaaaattggaactcgtaaaatcgtaatcaaaatcgaagga--ttactcaaggt 1981195  T
Q  154 cttttgtagaatcgatctagga 175  Q
    |||| ||||||||||| |||||    
T  1981196 ctttagtagaatcgatatagga 1981217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 215
Target Start/End: Original strand, 7730191 - 7730293
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc 212  Q
    |||||||||||||| ||||||| || | ||||||||||  ||||||||| ||| ||| || ||||||||||||| ||||| |||||  ||||||||||||    
T  7730191 tcgtaaaatcgcaaccaaaatcgaatggttttactcaactacttttgtataattgatataagaaattgtaaaatcgcaatcaaaattgatggattttacc 7730290  T
Q  213 aac 215  Q
    |||    
T  7730291 aac 7730293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 10285677 - 10285756
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    |||||||||||||||||| | |||||||||||||| ||| ||| || |||||| | | ||||||||||||||||||||||    
T  10285677 caaggttgtcaaaatcgggattttacttcaggtcgaaagagaagagaaaaatcaacaatcgtaaaatcgcaatcaaaatc 10285756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 272 - 345
Target Start/End: Complemental strand, 1977790 - 1977717
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtc 345  Q
    ||||||||||| ||||||| |||||||||| || | |||||   ||||||||||||||||||||||||||||||    
T  1977790 tataagaaatcctaaaatcgcaatcaaaatcgacgaattttgcatattttaggattctactatggatttgagtc 1977717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 59 - 211
Target Start/End: Original strand, 8346244 - 8346396
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    ||||| |||||| | | |||||||| ||||| ||| ||| | |||||| || | |||||| |  |||| ||||||| |||||||||||||||  ||||||    
T  8346244 gttgttaaaatcaggattttacttccggtcgaaagagaagaacaaaattgacaatcgtaagaatgcaaacaaaatcgaaggattttactcaactactttt 8346343  T
Q  159 gtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttac 211  Q
     |||||| ||| || ||||| |||| || ||||| |||||||| |||||||||    
T  8346344 atagaattgatataagaaatcgtaatatcgcaatcaaaatcaaaggattttac 8346396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 55 - 134
Target Start/End: Original strand, 8253958 - 8254037
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    ||||||| ||||||| |  ||||||||| |  ||| |||||| |||||||||||||| ||||||||||||||||||||||    
T  8253958 caaggttatcaaaattgatactttactttaaatcgaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatc 8254037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 76 - 168
Target Start/End: Complemental strand, 17741980 - 17741886
Alignment:
Q  76 tttacttcaggtcggaagg--gaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcga 168  Q
    |||||||||||||| |||   ||||||||||||||| | ||||||||| |||||||||||  |||||||||||| ||  |||||| |||||||||    
T  17741980 tttacttcaggtcgaaagaaagaatagcaaaatcgaaaatcgtaaaattgcaatcaaaattgaaggattttacttaactacttttttagaatcga 17741886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 136 - 214
Target Start/End: Original strand, 27509267 - 27509345
Alignment:
Q  136 aaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    |||||||||||||||  |||||| |||||||||| || ||||||||||||| ||||| ||| || || |||||||||||    
T  27509267 aaggattttactcaactacttttatagaatcgatataagaaattgtaaaatcgcaataaaattcgattgattttaccaa 27509345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 56 - 175
Target Start/End: Original strand, 21157475 - 21157587
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||| ||||| |||| |||||||||| ||  ||||||||||||||||||       ||||||| ||||||||||  |||||||||| ||||  |||    
T  21157475 aaggttgttaaaattggaattttacttcagatcaaaagggaatagcaaaatcg-------taaaatctcaatcaaaattgaaggattttattcaactact 21157567  T
Q  156 tttgtagaatcgatctagga 175  Q
    ||||||||||| || |||||    
T  21157568 tttgtagaatctatatagga 21157587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 81 - 214
Target Start/End: Complemental strand, 30294574 - 30294442
Alignment:
Q  81 ttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattg 180  Q
    |||||||||  |||||| ||||||||| | | ||||||| || ||||||||||| |||||||||||| ||  |||||| ||||||||||  | |||||      
T  30294574 ttcaggtcgagagggaagagcaaaatcaaaaatcgtaaa-tcacaatcaaaatcgaaggattttacttaactacttttatagaatcgataaaagaaatcc 30294476  T
Q  181 taaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||  |||| ||| || ||||||||||||||    
T  30294475 taaaatcacaatcaaactcgatggattttaccaa 30294442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 65 - 169
Target Start/End: Original strand, 8629512 - 8629616
Alignment:
Q  65 aaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaa 164  Q
    |||||||| |||| |||| |||| | |||||||||| ||||| | || || ||||| |||||||| ||||| ||  |||||||||| || ||||||||||    
T  8629512 aaaatcgggacttcactttaggttgaaagggaatagtaaaattgggactcataaaaacgcaatcacaatcagagagttttactcaaggaattttgtagaa 8629611  T
Q  165 tcgat 169  Q
    |||||    
T  8629612 tcgat 8629616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 56 - 144
Target Start/End: Original strand, 26281165 - 26281251
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggatttt 144  Q
    ||||||||||||||| | ||||||||| |||||| || |||||||| ||||| ||  |||||||||||||||||||||  |||||||||    
T  26281165 aaggttgtcaaaatcaggactttactttaggtcgaaaaggaatagc-aaatc-aggatcgtaaaatcgcaatcaaaattgaaggatttt 26281251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 7730247 - 7730287
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    |||||||||| |||||||| |||||||||||||||||||||    
T  7730247 tataagaaattgtaaaatcgcaatcaaaattgatggatttt 7730287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 1981282 - 1981321
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  1981282 ctaaatatatgttataaattgcatatagtcataaatgact 1981321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 94 - 133
Target Start/End: Original strand, 17809005 - 17809044
Alignment:
Q  94 ggaatagcaaaatcgagattcgtaaaatcgcaatcaaaat 133  Q
    |||||||||||||||| | |||||||||||||||||||||    
T  17809005 ggaatagcaaaatcgaaaatcgtaaaatcgcaatcaaaat 17809044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 227 - 266
Target Start/End: Original strand, 21157630 - 21157669
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||||||||||||||||||||||||||| || |||||||||    
T  21157630 ctaaatatatgttataaatggtatataatcgtaaatgact 21157669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 278 - 312
Target Start/End: Original strand, 21157522 - 21157556
Alignment:
Q  278 aaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    ||||||||||||||||||||||||||| |||||||    
T  21157522 aaatcgtaaaatctcaatcaaaattgaaggatttt 21157556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Original strand, 25842691 - 25842729
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgact 266  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  25842691 taaatatatgttataaattgcatatagtcataaatgact 25842729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 227 - 272
Target Start/End: Original strand, 17809074 - 17809119
Alignment:
Q  227 ctaaatatatgttataaatggtatatagtcataaatgacttagttt 272  Q
    ||||||||||||||||||| | ||||| |||||||||||| |||||    
T  17809074 ctaaatatatgttataaattgcatataatcataaatgactcagttt 17809119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 120 - 169
Target Start/End: Original strand, 26340212 - 26340260
Alignment:
Q  120 atcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgat 169  Q
    ||||||||||||||| ||| |||||||||||| |||||| ||||||||||    
T  26340212 atcgcaatcaaaatcgaagaattttactcaaa-acttttatagaatcgat 26340260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 349 - 401
Target Start/End: Original strand, 17809441 - 17809493
Alignment:
Q  349 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggatttt 401  Q
    ||||||||  ||||||||||||||||| ||||| | |||||||||| ||||||    
T  17809441 gaaggtgagtaaagtcacaaaatcctgaattttgggatttaagtcgcgatttt 17809493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 26565436 - 26565476
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    ||||| ||||||||||||  |||||||||||||||||||||    
T  26565436 tataaaaaatcgtaaaattgcaatcaaaattgatggatttt 26565476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 177; Significance: 3e-95; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 177; E-Value: 3e-95
Query Start/End: Original strand, 55 - 411
Target Start/End: Complemental strand, 28746131 - 28745769
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||| || |||||||||||||||| |||  ||||||||||||| || |||||||||||||||||||||| ||| |||||||||||  ||    
T  28746131 caaggttgtcaaaattgggactttacttcaggtcgaaagaaaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaagaattttactcaagaac 28746032  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||| |          || |||||||||||||||||| ||||||||    
T  28746031 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaattaatagtaaatatatgttataaatagtatatag 28745932  T
Q  255 tcataaatgacttagt------ttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagg 348  Q
    ||||||||||||||||      |||||||||||||||||||| |||||||||| |||| ||||| ||||||||  |||||||||||| |||||||||       
T  28745931 tcataaatgacttagtttataattataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgtctattttgagattctactatgaatttgagtcgtt 28745832  T
Q  349 gaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| |||||||||  ||||||| |||||| ||||||||||||||||||||    
T  28745831 gaaggtgaagaaagtcgcaaaatcctaaattttaggatttaaatcgggattttgacaacaatg 28745769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 167; E-Value: 3e-89
Query Start/End: Original strand, 54 - 412
Target Start/End: Complemental strand, 29067632 - 29067282
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||||||||||||||||||||||| | ||||||||||||||||  | || ||||||| |||||||| || ||||||||||||||| ||    
T  29067632 ccaaggttgtcaaaatcggaactttacttcaggtcgaatgggaatagcaaaatcggaactcataaaatctcaatcaaa-tcgaaggattttactcaagga 29067534  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc--aacnnnnnnnnntactaaatatatgttataaatggtata 251  Q
     ||||||||||| ||| | |||| ||||||||| ||||| |||||| ||||||||||||  ||           ||||||||||||         |||||    
T  29067533 tttttgtagaattgatattggaagttgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaaattaacactaaatatatg---------gtata 29067443  T
Q  252 tagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaa 351  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||| |||||||| |||||||||||||||||||||||   |||    
T  29067442 tagtcataaatgacttagtttataagaaatcgtaaaatcacaatcaaaatcgatggattttgtctattttgggattctactatggatttgagtcgttgaa 29067343  T
Q  352 ggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatgg 412  Q
    ||||||||||||| |||||||||| ||||||| ||||||||||||||||||||||||||||    
T  29067342 ggtgaagaaagtcgcaaaatcctgaattttagaatttaagtcgggattttgacaacaatgg 29067282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 59 - 407
Target Start/End: Complemental strand, 39428258 - 39427905
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaa----aggattttactcaaagac 154  Q
    |||||||||||||| |||||||||  ||| | |||||||||||||||||| || || |||||||||||||||||| ||    |||||||||||||||||     
T  39428258 gttgtcaaaatcgggactttacttgcggttgaaagggaatagcaaaatcgggactcataaaatcgcaatcaaaataaatcgaaggattttactcaaagat 39428159  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc-aacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    |||||| |||||||| |||||||||||||||| ||||| |||||| |||||||||||| ||          ||||||||||||||||||| | |||||||    
T  39428158 ttttgtggaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttacccaaaaaaaattaatactaaatatatgttataagtagtatata 39428059  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||| |||||||| |||||||||||| ||||||||||   ||| |    
T  39428058 gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggactttgtctattttgggattctactatcgatttgagtcgttgaacg 39427959  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaac 407  Q
    ||||||||||  |||||||| ||||||||  |||||| ||||||||||||||||    
T  39427958 tgaagaaagttgcaaaatccaggattttaaaatttaaatcgggattttgacaac 39427905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 155; E-Value: 4e-82
Query Start/End: Original strand, 56 - 411
Target Start/End: Original strand, 24619972 - 24620333
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||||||||||||||||| |||  |||||||||||||||| | || | |||||||||||||||||||| ||||||||||||||||||||    
T  24619972 aaggttgtcaaaatcggaactttacttcaagtcaaaagggaatagcaaaattgggacttgtaaaatcgcaatcaaaatcgaaggattttactcaaagact 24620071  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc---aacnnnnnnnnntactaaatatatgttataaatggtatat 252  Q
    |||||||||||||| ||| |||||||||||| ||||| |||||   |||||||||||   ||          |||||||||||| |||||||||||||||    
T  24620072 tttgtagaatcgatatagaaaattgtaaaatcgcaatcaaaattgttggattttaccaaaaaaaaataaaaatactaaatatattttataaatggtatat 24620171  T
Q  253 agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
    | |||||||||||||||||||||||||||||||||||  |||| ||||| |||| |||||  |||||||  ||||||||| || |||||||||   ||||    
T  24620172 aatcataaatgacttagtttataagaaatcgtaaaattgcaattaaaatcgatgaattttgcctattttgagattctactgtgaatttgagtcgttgaag 24620271  T
Q  353 gtgaagaaa---gtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||   ||| ||||||| |  ||||||| ||||||||||| |||||||||||||||    
T  24620272 gtgaagaaagtcgtcgcaaaatcttaaattttaggatttaagtcggaattttgacaacaatg 24620333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 126; E-Value: 8e-65
Query Start/End: Original strand, 56 - 412
Target Start/End: Original strand, 8155904 - 8156262
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||  ||| ||| |||||||| | ||| ||| |||||||| || | || |||||||||||  || ||| |||||||||||||||  |||    
T  8155904 aaggttgtcaaaattagaattttgcttcaggtggtaagagaagagcaaaatggacaatcataaaatcgcaactaagatcgaaggattttactcaactact 8156003  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn--tactaaatatatgttataaatggtatata 253  Q
    ||||||| || ||| || |||| |||||||| ||||| || |||  |||||||||||||            |||||||||||||||||||||||||||||    
T  8156004 tttgtagcattgatataagaaactgtaaaatcgcaatcaatatcg-tggattttaccaaaaataataataatactaaatatatgttataaatggtatata 8156102  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttct-attttaggattctactatggatttgagtcagggaag 352  Q
    || |||||| ||||||||||||||||||||||||||| |||||||||| |||||||||| ||| ||||| ||||| ||||||||||||||||||  ||||    
T  8156103 gttataaataacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatggattttgtctaattttgggattatactatggatttgagtcattgaag 8156202  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatgg 412  Q
    ||||| ||| ||  ||||| ||| ||||||| |||||||| |||||||||||||||||||    
T  8156203 gtgaaaaaaatcgtaaaattctgaattttagaatttaagttgggattttgacaacaatgg 8156262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 56 - 405
Target Start/End: Complemental strand, 17064661 - 17064326
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||||||||| || | ||| |||||||||| |||  || | ||||||||| | |||||||||||||||||||||| |||||||||||||||  |||    
T  17064661 aaggttgtcaaaattgggattttgcttcaggtcgaaagaaaagatcaaaatcgacaatcgtaaaatcgcaatcaaaatcgaaggattttactcaactact 17064562  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    ||||||||||| || || ||||||||||||| ||||| |||||| ||||||||||||||          ||||||||||||              |||||    
T  17064561 tttgtagaatcaatataagaaattgtaaaattgcaatcaaaatcgatggattttaccaaaaaaaaaaaatactaaatatat--------------atagt 17064476  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
    ||||||||||||||||||||||||||||||||||| |||| ||||| |||| ||||| |||||||||| ||||||||||| ||| |||||   |||||||    
T  17064475 cataaatgacttagtttataagaaatcgtaaaatcgcaataaaaatcgatgaattttgtctattttagaattctactatgaattggagtcgttgaaggtg 17064376  T
Q  356 aagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 405  Q
    || | | || |||||||||| ||||||  |||||||||||||||||||||    
T  17064375 aacacaatcgcaaaatcctgaattttaagatttaagtcgggattttgaca 17064326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 101 - 410
Target Start/End: Complemental strand, 20756331 - 20756039
Alignment:
Q  101 caaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatca 200  Q
    |||||||| || |||||||||||||||||||||  || |||||||||||| || ||||||||||||||| |||||||||||||||| ||||| ||||||     
T  20756331 caaaatcgggactcgtaaaatcgcaatcaaaattgaaagattttactcaaggatttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcg 20756232  T
Q  201 atggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaa 300  Q
    |||||||||||| |          ||||||||||||||||||||||                 ||||||||||||||||||||||||||  |||||||||    
T  20756231 atggattttacccaaaagaaataatactaaatatatgttataaatg-----------------acttagtttataagaaatcgtaaaattgcaatcaaaa 20756149  T
Q  301 ttgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattt 400  Q
    | ||| ||||||  |||||||| |||||||||||||||||||||||  ||||||||||||| || |||||||||| ||||||  ||||||||||||||||    
T  20756148 tcgattgattttgcctattttaagattctactatggatttgagtcattgaaggtgaagaaaatcgcaaaatcctgaattttataatttaagtcgggattt 20756049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 111; E-Value: 8e-56
Query Start/End: Original strand, 56 - 412
Target Start/End: Original strand, 22355841 - 22356184
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||| |||||||||||||||||| |||||||| || ||||||||||||||| || ||||||||||||||||||||||||| ||||||| |||| ||||    
T  22355841 aaggttctcaaaatcggaactttacatcaggtcgaaatggaatagcaaaatcgggactcgtaaaatcgcaatcaaaatcaaaagattttattcaaggact 22355940  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagt 255  Q
    |||||| |||||||     |||||||||||  ||||  |||||| ||||||||||||||          || ||||||||||||||||||||            
T  22355941 tttgtaaaatcgat----aaaattgtaaaaccgcaaacaaaatcgatggattttaccaaaaaataataataataaatatatgttataaatgg-------- 22356028  T
Q  256 cataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtg 355  Q
      ||||||||||||||||||||||||||||||||| ||||||||||| |||||||||   |||||||||||||||||||| |||  | |    |||| ||    
T  22356029 --taaatgacttagtttataagaaatcgtaaaatcgcaatcaaaattcatggattttgcttattttaggattctactatgaattcaaattgttgaagctg 22356126  T
Q  356 -aagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatgg 412  Q
     || ||| ||  ||||||||| ||||||| ||||||||||| ||||||| ||||||||    
T  22356127 aaaaaaaatcttaaaatcctgaattttaggatttaagtcggaattttgataacaatgg 22356184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 101; E-Value: 7e-50
Query Start/End: Original strand, 55 - 337
Target Start/End: Complemental strand, 42697202 - 42696920
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||| | | ||| |||||||||| | | ||| || |||||||| | | ||||||||||||  |||||  |||||||||| ||||  ||    
T  42697202 caaggttgtcaaaatcaggattttgcttcaggtcgaatgagaagag-aaaatcgacaattgtaaaatcgcaactaaaattgaaggattttattcaactac 42697104  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn-tactaaatatatgttataaatggtatata 253  Q
    ||||||||||||||| || |||||  |||| | ||||| |||||| ||||||||||||||           ||| |||||||||||||||||||||||||    
T  42697103 ttttgtagaatcgatataagaaatcataaactcgcaatcaaaatcgatggattttaccaaaaaaaaaaaaataccaaatatatgttataaatggtatata 42697004  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatgga 337  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||||  |||||||  ||||||||||||||    
T  42697003 gtcataaatgacttagtttataagaaatcgtaaaatcgcaatcaaaatcgatgaattttgcctattttgagattctactatgga 42696920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 54 - 409
Target Start/End: Original strand, 3449083 - 3449419
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||||||||||| || | ||| ||| |||| | ||| ||| ||||||||||| | |||||||||||||| ||||||| || ||||||| ||||  |    
T  3449083 ccaaggttgtcaaaattgggattttgctttaggttgaaagagaagagcaaaatcgacaatcgtaaaatcgcaaccaaaatcgaatgattttattcaacta 3449182  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
    |||||||||||||||| || |||| |||||||| ||||| |||||  ||||||||||||||          |||||||||||||| | |||||           
T  3449183 cttttgtagaatcgatataagaaaatgtaaaatcgcaatcaaaattgatggattttaccaa-aaaaaataatactaaatatatgtcacaaatg------- 3449274  T
Q  254 gtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaagg 353  Q
              ||||| ||||||||||||||||||||| |||| |||||  |||||||||  |||||||||||||||||||| ||||| || |   |||||    
T  3449275 ----------acttactttataagaaatcgtaaaatcgcaataaaaatctatggattttgcctattttaggattctactatagattttag-cgttgaagg 3449363  T
Q  354 tgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    | ||||||||| |||||||||| ||||||| |||||||||||||||||||||||||    
T  3449364 taaagaaagtcgcaaaatcctgaattttaggatttaagtcgggattttgacaacaa 3449419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 8592173 - 8592293
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||| ||||||| ||||||||||| |||| |||| |||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||    
T  8592173 caaggttgtcgaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 8592272  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||||||||||| |||||    
T  8592273 ttttgtagaatcgatatagga 8592293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 54 - 253
Target Start/End: Original strand, 25870095 - 25870294
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||  | ||| ||| |||||| ||| ||| || |||||||| | |||||||||||||| |||||||||||||||||||||||  |    
T  25870095 ccaaggttgtcaaaatcgagattttgctttaggtcgaaagagaagagtaaaatcgacaatcgtaaaatcgcaaccaaaatcaaaggattttactcaacta 25870194  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatata 253  Q
      |||||||||||||| || ||||||||||||| ||||| |||||| ||||||||||||||          |||||||||||||||||||||||||||||    
T  25870195 agtttgtagaatcgatataagaaattgtaaaatcgcaatcaaaatcgatggattttaccaaaaaacaataatactaaatatatgttataaatggtatata 25870294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 55 - 214
Target Start/End: Complemental strand, 13286299 - 13286140
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||||||||||  || ||| |||||||||||||||||| || |||||| | | ||||||||||||||||||||||||| ||||||||||||  ||    
T  13286299 caaggttgtcaaaatcacaattttgcttcaggtcggaagggaagagaaaaatcaaaactcgtaaaatcgcaatcaaaatcaaaagattttactcaactac 13286200  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||||||||||| || ||||| |||||||  |||| |||||| ||||||||||||||    
T  13286199 ttttgtagaatcgatataagaaatcgtaaaatcacaatgaaaatcgatggattttaccaa 13286140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 81 - 401
Target Start/End: Complemental strand, 21963760 - 21963438
Alignment:
Q  81 ttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattg 180  Q
    ||||||||| ||| ||| ||||||||||| | | |||||||| ||| |||||| |||| |||||||||||  |||||| |||||||||| || ||||| |    
T  21963760 ttcaggtcgaaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcg 21963661  T
Q  181 taaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn--tactaaatatatgttataaatggtatata--gtcataaatgacttagtttataa 276  Q
    |||||    ||| |||||  ||||||||||| ||            ||||||||||| ||||||||| |||||||  |||||||||||||||||  ||||    
T  21963660 taaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataa 21963562  T
Q  277 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 376  Q
    ||||||| |||||| | |||||||| ||||||||||   |||||||||||| |||||||||||||||||    |||||||||||||||  |||||| ||     
T  21963561 gaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttga 21963463  T
Q  377 attttagtatttaagtcgggatttt 401  Q
    ||||||| |||||||||||||||||    
T  21963462 attttaggatttaagtcgggatttt 21963438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 81 - 401
Target Start/End: Complemental strand, 21986196 - 21985874
Alignment:
Q  81 ttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattg 180  Q
    ||||||||| ||| ||| ||||||||||| | | |||||||| ||| |||||| |||| |||||||||||  |||||| |||||||||| || ||||| |    
T  21986196 ttcaggtcgaaagagaagagcaaaatcgacaatagtaaaatcacaaccaaaattaaagaattttactcaattacttttatagaatcgatataagaaatcg 21986097  T
Q  181 taaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn--tactaaatatatgttataaatggtatata--gtcataaatgacttagtttataa 276  Q
    |||||    ||| |||||  ||||||||||| ||            ||||||||||| ||||||||| |||||||  |||||||||||||||||  ||||    
T  21986096 taaaaccagaatcaaaattgatggattttacaaaaaaaattaataatactaaatata-gttataaatagtatatatagtcataaatgacttagtaaataa 21985998  T
Q  277 gaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctgg 376  Q
    ||||||| |||||| | |||||||| ||||||||||   |||||||||||| |||||||||||||||||    |||||||||||||||  |||||| ||     
T  21985997 gaaatcg-aaaatcgctatcaaaatcgatggattttgcatattttaggattttactatggatttgagtcgttcaaggtgaagaaagtcgtaaaatcttga 21985899  T
Q  377 attttagtatttaagtcgggatttt 401  Q
    ||||||| |||||||||||||||||    
T  21985898 attttaggatttaagtcgggatttt 21985874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 83; E-Value: 4e-39
Query Start/End: Original strand, 54 - 410
Target Start/End: Complemental strand, 22137633 - 22137278
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||| |||||||||||||  | |||  ||||||||| ||| ||| |||||||||   | | |||||||| ||| ||||||||||| |||||||||||  |    
T  22137633 ccaatgttgtcaaaatcgagattttgtttcaggtcgaaagagaagagcaaaatcagcaatagtaaaatcacaaccaaaatcaaagaattttactcaacta 22137534  T
Q  154 cttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnn-tactaaatatatgttataaatggtatat 252  Q
    |||||||||||||||| || ||||| ||||||    ||| |||||  ||||||||||| ||           ||||||||||| ||||||||| ||||||    
T  22137533 cttttgtagaatcgatataagaaatcgtaaaaccaaaatcaaaattgatggattttacaaaaaaattaataatactaaatata-gttataaatagtatat 22137435  T
Q  253 agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaag 352  Q
    ||||||||||||||||||  ||||||||||| |||||| |||| ||||| ||||||||||   |||||| ||||| ||||||||||||||| |    |||    
T  22137434 agtcataaatgacttagtaaataagaaatcg-aaaatcgcaattaaaatcgatggattttgcatattttgggattttactatggatttgaggcgttcaag 22137336  T
Q  353 gtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||||||||||||  || ||| || ||||||| ||||||||| ||||||| | ||||||    
T  22137335 gtgaagaaagtcgtaacatcttgaattttaggatttaagtcaggattttaaaaacaat 22137278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 225 - 392
Target Start/End: Original strand, 22494732 - 22494892
Alignment:
Q  225 tactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttttctattttagg 324  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||||       ||||||||| |||||||||| |||| ||||| | |||||||||    
T  22494732 tactaaatatatgttataaatggtatatagtcataactgacttagtttat-------cgtaaaatcgcaatcaaaatcgatgaattttgtttattttagg 22494824  T
Q  325 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagt 392  Q
    ||||||||||| |||| ||||   ||||||||| |||||| |||||||   |||||||| ||||||||    
T  22494825 attctactatgaattttagtcgttgaaggtgaaaaaagtcgcaaaatctcagattttaggatttaagt 22494892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 72; E-Value: 1e-32
Query Start/End: Original strand, 55 - 214
Target Start/End: Original strand, 6136343 - 6136502
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||| |||||||||||  || ||| |||||  ||||||||||| ||||||||| | | ||||||||||||||||||||||||| ||||||||||||  ||    
T  6136343 caagtttgtcaaaatcacaattttgcttcatatcggaagggaaaagcaaaatcaaaaatcgtaaaatcgcaatcaaaatcaaaagattttactcaactac 6136442  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    |||| |||||||||| || ||||| |||||||  |||| |||||| ||||||||||||||    
T  6136443 ttttatagaatcgatataagaaatcgtaaaatcacaatcaaaatcgatggattttaccaa 6136502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 55 - 290
Target Start/End: Original strand, 15515032 - 15515265
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||||| |||||||| | ||| |||||||| | ||| ||  | ||||||||| | | ||||||||  ||  |||||| ||| |||||||||||  ||    
T  15515032 caaggttgttaaaatcgggattttgcttcaggttgaaagagatgaccaaaatcgacaattgtaaaatcttaactaaaatcgaagtattttactcaactac 15515131  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatag 254  Q
    |||| |||||||  |  | |||||||||||||   ||| |||||| ||||||||||||||          ||||||||||||||||||||||||||||||    
T  15515132 ttttatagaatcattagaagaaattgtaaaattataataaaaatccatggattttaccaa--aaaaataatactaaatatatgttataaatggtatatag 15515229  T
Q  255 tcataaatgacttagtttataagaaatcgtaaaatc 290  Q
    |||||||||||||||||||||||||||||| |||||    
T  15515230 tcataaatgacttagtttataagaaatcgtgaaatc 15515265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 68; E-Value: 3e-30
Query Start/End: Original strand, 59 - 214
Target Start/End: Complemental strand, 27676787 - 27676632
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactttt 158  Q
    ||||| |||||| | | ||| ||||| |||| ||||||| ||||||||||| | || ||||||||||||||||||| || ||||||||||||  ||||||    
T  27676787 gttgttaaaatcaggattttgcttcaagtcgaaagggaagagcaaaatcgaaaatcttaaaatcgcaatcaaaatcgaaagattttactcaactactttt 27676688  T
Q  159 gtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||| ||||||| || ||||| |||||||  |||| |||||||||||||||||||||    
T  27676687 gtaaaatcgatataagaaatcgtaaaatcacaatcaaaatcaatggattttaccaa 27676632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 277 - 410
Target Start/End: Original strand, 24649684 - 24649818
Alignment:
Q  277 gaaatcgtaaaatctcaatcaaaattgatggattttt-tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctg 375  Q
    |||||||||||||| || |||||||||||| |||||  | |||||| | |||||||||||||||||||||   |||||||||| |||||| ||||||||     
T  24649684 gaaatcgtaaaatcacagtcaaaattgatgaattttgctttattttggaattctactatggatttgagtcgttgaaggtgaagcaagtcaaaaaatccta 24649783  T
Q  376 gattttagtatttaagtcgggattttgacaacaat 410  Q
    |||||||  ||||||||||||||||||||||||||    
T  24649784 gattttacgatttaagtcgggattttgacaacaat 24649818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 8560230 - 8560351
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||| |||||||||| ||||||||||| |||  |||||| |||||||||||||| |||| ||||||||||||||||| ||||||||||||||| |     
T  8560230 ccaaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgagactcgtgaaatcgcaatcaaaatcgaaggattttactcaaggt 8560329  T
Q  154 cttttgtagaatcgatctagga 175  Q
     |||||||||||| || |||||    
T  8560330 tttttgtagaatcaatatagga 8560351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 3041570 - 3041458
Alignment:
Q  63 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtag 162  Q
    |||||||||| | ||||||||| |||| || ||| ||||||||||| || |||||||||||||||||||||| ||||||||||||||| |||||||||||    
T  3041570 tcaaaatcgggattttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggacttttgtag 3041471  T
Q  163 aatcgatctagga 175  Q
    || |||| |||||    
T  3041470 aaacgatgtagga 3041458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 55 - 169
Target Start/End: Original strand, 20766675 - 20766789
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| |||||||||||  ||| ||| || |||||||||||||| |||||||||||||||||||||| ||  ||||||||||| | |    
T  20766675 caaggttgtcaaaatcgggactttacttcaactcgaaagagagtagcaaaatcgagactcgtaaaatcgcaatcaaaatcgaaaaattttactcaagggc 20766774  T
Q  155 ttttgtagaatcgat 169  Q
    ||||| |||||||||    
T  20766775 ttttggagaatcgat 20766789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 102 - 214
Target Start/End: Complemental strand, 28136070 - 28135958
Alignment:
Q  102 aaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaa 201  Q
    |||||||||| |||||||||||| ||||||||| |||||||||||||||  ||||||||| ||| ||| || ||||||||||||||| ||| ||||||||    
T  28136070 aaaatcgagaatcgtaaaatcgctatcaaaatcgaaggattttactcaactacttttgtaaaattgatataagaaattgtaaaataggaatcaaaatcaa 28135971  T
Q  202 tggattttaccaa 214  Q
    |  ||||||||||    
T  28135970 tatattttaccaa 28135958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 284 - 410
Target Start/End: Original strand, 30727694 - 30727820
Alignment:
Q  284 taaaatctcaatcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttag 383  Q
    ||||||| |||||||||| |||| ||||| |||||||| |||||||||||| ||||||||||   ||||||||||||||||  ||||| | ||||||||     
T  30727694 taaaatcgcaatcaaaatcgatgaattttgtctattttgggattctactatagatttgagtcgttgaaggtgaagaaagtcgtaaaattcaggattttaa 30727793  T
Q  384 tatttaagtcgggattttgacaacaat 410  Q
     ||||||||| ||||||||| ||||||    
T  30727794 gatttaagtcaggattttgataacaat 30727820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 58; E-Value: 3e-24
Query Start/End: Original strand, 306 - 411
Target Start/End: Complemental strand, 27676460 - 27676355
Alignment:
Q  306 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 405  Q
    |||||||  ||||||| ||||||| ||||||||||||||||  ||||||||| |||||| |||||||||| ||||||  ||||||||| |||||||||||    
T  27676460 ggattttacctattttgggattctgctatggatttgagtcatagaaggtgaataaagtcgcaaaatcctgcattttacgatttaagtcaggattttgaca 27676361  T
Q  406 acaatg 411  Q
    ||||||    
T  27676360 acaatg 27676355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 22971163 - 22971044
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||| ||||||| || ||||||||||| ||   |||| | ||||||||||| || |||||||||||||||||||||| ||||||||||||||| |||    
T  22971163 caaggttatcaaaattgggactttacttcaagttaaaagg-agtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggac 22971065  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||||||| ||| |||||    
T  22971064 ttttgtagaattgatgtagga 22971044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 55 - 163
Target Start/End: Complemental strand, 41671534 - 41671426
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| | ||| |||||||||| ||| ||| ||||||||||| | | |||||||||||| ||||||| |||||||||||||||  ||    
T  41671534 caaggttgtcaaaatcgggattttgcttcaggtcgaaagagaagagcaaaatcgataattgtaaaatcgcaaccaaaatcgaaggattttactcaactac 41671435  T
Q  155 ttttgtaga 163  Q
    |||||||||    
T  41671434 ttttgtaga 41671426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 56 - 214
Target Start/End: Original strand, 10872490 - 10872648
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||||||||||| | | |||||||||||||  ||||||| || |||||| | | || ||||||||||||||||||  |||||||||||| ||  |||    
T  10872490 aaggttgtcaaaatcaggattttacttcaggtcaaaagggaagagaaaaatcaaaaatcataaaatcgcaatcaaaattgaaggattttactaaactact 10872589  T
Q  156 tttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    |||| ||||||||| || ||||| |||||||   ||| |||||  ||||||||||||||    
T  10872590 tttgaagaatcgatataagaaatcgtaaaatcagaataaaaattgatggattttaccaa 10872648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 264 - 416
Target Start/End: Original strand, 25870350 - 25870511
Alignment:
Q  264 acttagtttataagaaatcgtaaaatctcaatcaaaatt-----gatggattttttctattttaggattctactatggatttgagtcagg----gaaggt 354  Q
    ||||| ||||||||||||||||||||| ||||||||||      ||||||||||  |||||||  | |||||||| | |||||||||       |||| |    
T  25870350 acttaatttataagaaatcgtaaaatcgcaatcaaaatcaaatcgatggattttgcctattttgaggttctactacgaatttgagtcgttcgttgaagat 25870449  T
Q  355 gaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatggtgta 416  Q
    |||||||||||||||||| |||||||||| |||||||||| |||||||||||||||| ||||    
T  25870450 gaagaaagtcacaaaatcttggattttaggatttaagtcgagattttgacaacaatgatgta 25870511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 56 - 175
Target Start/End: Complemental strand, 18014345 - 18014226
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||| |||||||||| ||||||||||| ||   || ||| ||||||||| | || |||||||||||||||||||||| ||||||||||||||| ||||    
T  18014345 aaggttatcaaaatcgggactttacttcaagttaaaatggagtagcaaaattgggactcgtaaaatcgcaatcaaaatcgaaggattttactcaaggact 18014246  T
Q  156 tttgtagaatcgatctagga 175  Q
    ||| || || |||| |||||    
T  18014245 tttataaaaccgatatagga 18014226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 57 - 175
Target Start/End: Complemental strand, 19348906 - 19348788
Alignment:
Q  57 aggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagactt 156  Q
    ||||| ||||||| |  ||||||||||| |||  |||||| |||||||||||||| |||||||||||||||||||||  |||||||||| | || |||||    
T  19348906 aggttatcaaaattgagactttacttcaagtcaaaagggagtagcaaaatcgagactcgtaaaatcgcaatcaaaatggaaggattttattgaaggactt 19348807  T
Q  157 ttgtagaatcgatctagga 175  Q
    || || ||||||| |||||    
T  19348806 ttataaaatcgatatagga 19348788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 15806543 - 15806635
Alignment:
Q  318 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||| ||||||| ||||||||||||||||  ||||||||| |||||| |||||| ||||||| ||| ||||||||| |||||||||||||||||    
T  15806543 ttttgggattctgctatggatttgagtcattgaaggtgaataaagtcgcaaaattctggattgtaggatttaagtc-ggattttgacaacaatg 15806635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 27090797 - 27090677
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||| ||||||  | ||||||| |||||| |||||||||| ||||| |  | |||||| |||||||| |||||| ||||||||||||||| ||     
T  27090797 caaggttgtcgaaatcgagattttactttaggtcgaaagggaatagaaaaattgcaaatcgtaagatcgcaataaaaatcgaaggattttactcaaggaa 27090698  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||| ||||||| |||||    
T  27090697 ttttgtataatcgatatagga 27090677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 55 - 214
Target Start/End: Original strand, 9152760 - 9152917
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||| | | ||| ||| |||||| ||| ||| || |||||| | | ||||||||||| || ||||||| || ||||| ||||||  |     
T  9152760 caaggttgtcaaaatcaggattttgctt-aggtcgaaagagaagagtaaaatcaacaatcgtaaaatcgtaaccaaaatcgaaagatttgactcaactat 9152858  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||||||||||| || |||||||||||||  |||| |||||| || |||||||||||    
T  9152859 ttttgtagaatcgat-tatgaaattgtaaaatcacaatcaaaatcgatagattttaccaa 9152917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 76 - 134
Target Start/End: Original strand, 30727654 - 30727712
Alignment:
Q  76 tttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    |||||||||||| | ||||||||||||||||||||| || |||||||||||||||||||    
T  30727654 tttacttcaggttgaaagggaatagcaaaatcgagactcctaaaatcgcaatcaaaatc 30727712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 17796364 - 17796267
Alignment:
Q  314 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| |||||||||||||||| |||||||  |||||||| || |||||||||| ||||    
T  17796364 tctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 17796267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 17796473 - 17796376
Alignment:
Q  314 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| ||||| ||||||||    |||| |||| ||||||  |||||||| |||||||  ||||||||||| |||||||||||||||    
T  17796473 tctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 17796376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 19104804 - 19104707
Alignment:
Q  314 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| |||||||||||||||| |||||||  |||||||| || |||||||||| ||||    
T  19104804 tctattttaggattctgctatgaattttagttgttgaaggtgaataaagtcacaaaatcctagattttatgatttaagttggaattttgacaataatg 19104707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 19104913 - 19104816
Alignment:
Q  314 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| ||||| ||||||||    |||| |||| ||||||  |||||||| |||||||  ||||||||||| |||||||||||||||    
T  19104913 tctattttaggattctgctatgaatttgagttgttgaagatgaataaagtcgtaaaatcctagattttatgatttaagtcggaattttgacaacaatg 19104816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 24649523 - 24649588
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaa 120  Q
    ||||||||||||||| || |||||||||||||||| |||||||||||||||| | || ||||||||    
T  24649523 caaggttgtcaaaattgggactttacttcaggtcgaaagggaatagcaaaattgggactcgtaaaa 24649588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 60 - 169
Target Start/End: Complemental strand, 27055443 - 27055334
Alignment:
Q  60 ttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttg 159  Q
    ||||||||||||||| ||||||||||||   |||| ||||| |||||||  | ||||||||||||||| |||||  || | ||||||| ||| || ||||    
T  27055443 ttgtcaaaatcggaattttacttcaggtaaaaaggaaatagtaaaatcgcaaatcgtaaaatcgcaattaaaattgaaaggttttactaaaaaacatttg 27055344  T
Q  160 tagaatcgat 169  Q
    ||||||||||    
T  27055343 tagaatcgat 27055334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 306 - 400
Target Start/End: Original strand, 10872971 - 10873065
Alignment:
Q  306 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattt 400  Q
    |||||||  |||||||  |||||| |||||||||||||||   ||||||||| ||  ||||||||||||||||||||| |||| | |||||||||    
T  10872971 ggattttgcctattttgagattctgctatggatttgagtcgttgaaggtgaataatatcacaaaatcctggattttaggatttcaatcgggattt 10873065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 60 - 146
Target Start/End: Complemental strand, 13006174 - 13006089
Alignment:
Q  60 ttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttac 146  Q
    ||||||||||||| | ||| ||| |||||| |||||||||||||||| || | |||||||||||||||||||||  || ||||||||    
T  13006174 ttgtcaaaatcggga-tttgctttaggtcgaaagggaatagcaaaattgaaaatcgtaaaatcgcaatcaaaattgaatgattttac 13006089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 331 - 409
Target Start/End: Complemental strand, 28135801 - 28135723
Alignment:
Q  331 ctatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaa 409  Q
    ||||||||||||||||  ||| ||||| |||||| |||||||||| ||||||  |||||| |||| |||||||||||||    
T  28135801 ctatggatttgagtcactgaaagtgaataaagtcgcaaaatcctgaattttacgatttaaatcggaattttgacaacaa 28135723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 17796894 - 17796806
Alignment:
Q  81 ttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgat 169  Q
    ||||||||| ||||||| || |||||  | | ||||||||| ||||| |||||| ||| |||||||||||  |||||||||||||||||    
T  17796894 ttcaggtcgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgat 17796806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 81 - 169
Target Start/End: Complemental strand, 19105334 - 19105246
Alignment:
Q  81 ttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgat 169  Q
    ||||||||| ||||||| || |||||  | | ||||||||| ||||| |||||| ||| |||||||||||  |||||||||||||||||    
T  19105334 ttcaggtcgaaagggaaaagaaaaataaaaaatcgtaaaattgcaattaaaatcgaagcattttactcaactacttttgtagaatcgat 19105246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 63 - 134
Target Start/End: Complemental strand, 9169942 - 9169871
Alignment:
Q  63 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatc 134  Q
    |||||||||||||||||||||| |||| |||| | ||||||||| | ||  |||||||| ||||||||||||    
T  9169942 tcaaaatcggaactttacttcaagtcgaaaggaagtagcaaaattgggacccgtaaaattgcaatcaaaatc 9169871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 59 - 175
Target Start/End: Original strand, 21553671 - 21553786
Alignment:
Q  59 gttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaagg-attttactcaaagacttt 157  Q
    ||||| |||||||| |||||||||||  ||| |||||| ||| ||||||| || | ||  |||||||||||||||| ||||  ||||| |||| ||||||    
T  21553671 gttgtaaaaatcgggactttacttcaaatcgaaagggagtagaaaaatcgggactggt--aatcgcaatcaaaatcgaaggttttttattcaaggacttt 21553768  T
Q  158 tgtagaatcgatctagga 175  Q
    |||||||| ||| |||||    
T  21553769 tgtagaattgatatagga 21553786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 17796582 - 17796485
Alignment:
Q  314 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| ||||||  |||||||| |||||||  |||||| |||  |||||||||||||||    
T  17796582 tctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 17796485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 314 - 411
Target Start/End: Complemental strand, 19105022 - 19104925
Alignment:
Q  314 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||||||||||||| ||||| |||| |||    ||||||||| ||||||  |||||||| |||||||  |||||| |||  |||||||||||||||    
T  19105022 tctattttaggattctgctatgaatttaagttgttgaaggtgaataaagtcgaaaaatcctagattttatgatttaattcgaaattttgacaacaatg 19104925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 6136457 - 6136497
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    ||||||||||||||||||| |||||||||| ||||||||||    
T  6136457 tataagaaatcgtaaaatcacaatcaaaatcgatggatttt 6136497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 8592359 - 8592399
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgactta 268  Q
    |||||||||||||||||| | ||||||||||||||||||||    
T  8592359 taaatatatgttataaattgcatatagtcataaatgactta 8592399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 239 - 282
Target Start/End: Original strand, 9152941 - 9152984
Alignment:
Q  239 tataaatggtatatagtcataaatgacttagtttataagaaatc 282  Q
    |||| ||| ||||||||||||||| |||||||||||||||||||    
T  9152941 tatacatgatatatagtcataaataacttagtttataagaaatc 9152984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 19348722 - 19348684
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgact 266  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  19348722 taaatatatgttataaattgcatatagtcataaatgact 19348684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 228 - 266
Target Start/End: Complemental strand, 27676617 - 27676579
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgact 266  Q
    ||||||||||||||||||  |||||||||||||||||||    
T  27676617 taaatatatgttataaattatatatagtcataaatgact 27676579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 228 - 264
Target Start/End: Complemental strand, 9169842 - 9169806
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatga 264  Q
    |||||||||||||||||| | ||||||||||||||||    
T  9169842 taaatatatgttataaattgcatatagtcataaatga 9169806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 312
Target Start/End: Original strand, 10872603 - 10872643
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    |||||||||||||||||||  ||| ||||||||||||||||    
T  10872603 tataagaaatcgtaaaatcagaataaaaattgatggatttt 10872643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 13286185 - 13286145
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    ||||||||||||||||||| |||| ||||| ||||||||||    
T  13286185 tataagaaatcgtaaaatcacaatgaaaatcgatggatttt 13286145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 17796807 - 17796771
Alignment:
Q  273 ataagaaatcgtaaaatctcaatcaaaattgatggat 309  Q
    ||||||||||||||||||  |||||||||||||||||    
T  17796807 ataagaaatcgtaaaatcgaaatcaaaattgatggat 17796771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 273 - 309
Target Start/End: Complemental strand, 19105247 - 19105211
Alignment:
Q  273 ataagaaatcgtaaaatctcaatcaaaattgatggat 309  Q
    ||||||||||||||||||  |||||||||||||||||    
T  19105247 ataagaaatcgtaaaatcgaaatcaaaattgatggat 19105211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 272 - 312
Target Start/End: Complemental strand, 27676677 - 27676637
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggatttt 312  Q
    ||||||||||||||||||| ||||||||||  |||||||||    
T  27676677 tataagaaatcgtaaaatcacaatcaaaatcaatggatttt 27676637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 366 - 406
Target Start/End: Complemental strand, 42696910 - 42696870
Alignment:
Q  366 caaaatcctggattttagtatttaagtcgggattttgacaa 406  Q
    |||||||||| ||||||  ||||||||||||||||||||||    
T  42696910 caaaatcctgaattttatgatttaagtcgggattttgacaa 42696870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0417 (Bit Score: 141; Significance: 9e-74; HSPs: 1)
Name: scaffold0417
Description:

Target: scaffold0417; HSP #1
Raw Score: 141; E-Value: 9e-74
Query Start/End: Original strand, 94 - 413
Target Start/End: Original strand, 7268 - 7587
Alignment:
Q  94 ggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaatt 193  Q
    |||||||||||||||||| | ||||||||| |||||||||| |||||||||||||||  |||||||| |||| ||| |||||||||||| ||| |||||     
T  7268 ggaatagcaaaatcgagacttgtaaaatcgtaatcaaaatcgaaggattttactcaagtacttttgttgaatagatataggaaattgtataatcgcaatc 7367  T
Q  194 aaaatcaatggattttaccaacnnnnnnnnntactaaatatatgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaatctca 293  Q
    |||||| ||| ||||||||||          ||||||||||||||| ||| ||||||||| |||||||| |||| |||||||||||||||||||||| ||    
T  7368 aaaatcgatgaattttaccaaaaaacaataatactaaatatatgttctaattggtatatattcataaattacttcgtttataagaaatcgtaaaatcgca 7467  T
Q  294 atcaaaattgatggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtc 393  Q
    || ||||| |||| |||||  ||||||||||||||||||||||||||   ||   |||||| ||||||||| |||||||||| ||||||| |||||||||    
T  7468 attaaaatcgatgaattttgcctattttaggattctactatggattttgttcgttgaaggtaaagaaagtcgcaaaatcctgaattttagaatttaagtc 7567  T
Q  394 gggattttgacaacaatggt 413  Q
    |||||| | |||||||||||    
T  7568 gggattctaacaacaatggt 7587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0042 (Bit Score: 120; Significance: 3e-61; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 120; E-Value: 3e-61
Query Start/End: Original strand, 115 - 411
Target Start/End: Original strand, 93539 - 93834
Alignment:
Q  115 gtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaa 214  Q
    ||||||||| |||||||||| |||||||||| ||||  ||||||||||||||||| ||  |||| ||||||| ||||| |||||| ||||||||||||||    
T  93539 gtaaaatcgtaatcaaaatcgaaggattttattcaactacttttgtagaatcgatataataaatcgtaaaatcgcaatcaaaatcgatggattttaccaa 93638  T
Q  215 cnnnnnnnnntactaaatatatgttataaatggtatat-agtcataaatgacttagtttataagaaatcgtaaaatctcaatcaaaattgatggattttt 313  Q
              ||||||||||||||||| ||| |||||| ||||||||| |||||| |||| |||||||||||||||| |||||||||| |||||||||      
T  93639 aaacaaatattactaaatatatgttatgaatcgtatattagtcataaacgacttaatttaaaagaaatcgtaaaatcgcaatcaaaatcgatggatttcg 93738  T
Q  314 tctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
     ||||||||| ||||| ||||||||||||||    || |||||||||| |  |||||| ||||||||||| |||||||||||||||||||||||||||    
T  93739 cctattttagaattcttctatggatttgagttgttgagggtgaagaaaat--caaaattctggattttaggatttaagtcgggattttgacaacaatg 93834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 109; Significance: 1e-54; HSPs: 2)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 109; E-Value: 1e-54
Query Start/End: Original strand, 55 - 215
Target Start/End: Original strand, 56199 - 56359
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||  |||||||||||||||| |||||||||||||||||||||    ||||||||||||||||||| ||||||||||||||| |||    
T  56199 caaggttgtcaaaatcgagactttacttcaggtcgaaagggaatagcaaaatcgagacatctaaaatcgcaatcaaaatcgaaggattttactcaaggac 56298  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttaccaac 215  Q
    ||||||||||||||| |||||||||||||||| ||||| |||||| |||||||||||||||    
T  56299 ttttgtagaatcgatataggaaattgtaaaatcgcaatcaaaatcgatggattttaccaac 56359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 235 - 289
Target Start/End: Original strand, 58736 - 58790
Alignment:
Q  235 atgttataaatggtatatagtcataaatgacttagtttataagaaatcgtaaaat 289  Q
    ||||||||| |||||||||||||||||||| ||||||||||||||||||||||||    
T  58736 atgttataagtggtatatagtcataaatgatttagtttataagaaatcgtaaaat 58790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0079 (Bit Score: 74; Significance: 9e-34; HSPs: 1)
Name: scaffold0079
Description:

Target: scaffold0079; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 14699 - 14820
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||| ||||||||||  |||||||||| |||| || ||| ||||||||||| || |||||||||||||||||||||| |||||||||| |||||||    
T  14699 ccaaggttatcaaaatcggggctttacttcaagtcgaaatggagtagcaaaatcgggactcgtaaaatcgcaatcaaaatcgaaggattttattcaaaga 14798  T
Q  154 cttttgtagaatcgatctagga 175  Q
    |||||||||||||||| |||||    
T  14799 cttttgtagaatcgatgtagga 14820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510 (Bit Score: 69; Significance: 9e-31; HSPs: 2)
Name: scaffold0510
Description:

Target: scaffold0510; HSP #1
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 272 - 411
Target Start/End: Original strand, 91 - 231
Alignment:
Q  272 tataagaaatcgtaaaatctcaatcaaaattgatggattttttc-tattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaa 370  Q
    |||||||||| ||||||||||||||||||| ||||||||||  | |||||||| ||| |||||||||||||||||   ||| |||||||||||| |||||    
T  91 tataagaaattgtaaaatctcaatcaaaatcgatggattttcgcctattttagaattttactatggatttgagtcgttgaacgtgaagaaagtcgcaaaa 190  T
Q  371 tcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    ||||| ||||||| |||||||||||||| ||  ||||||||    
T  191 tcctgcattttaggatttaagtcgggatcttatcaacaatg 231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0510; HSP #2
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 80 - 209
Target Start/End: Original strand, 3 - 131
Alignment:
Q  80 cttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaatt 179  Q
    |||||||||| | | ||| ||||||||||| | ||||||||||| || ||||||| |||||||||||||||  || |||||||||||||| || ||||||    
T  3 cttcaggtcgaatgagaagagcaaaatcgacaatcgtaaaatcgaaaccaaaatcgaaggattttactcaactac-tttgtagaatcgatataagaaatt 101  T
Q  180 gtaaaatagcaattaaaatcaatggatttt 209  Q
    |||||||  |||| |||||| |||||||||    
T  102 gtaaaatctcaatcaaaatcgatggatttt 131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603 (Bit Score: 67; Significance: 1e-29; HSPs: 2)
Name: scaffold0603
Description:

Target: scaffold0603; HSP #1
Raw Score: 67; E-Value: 1e-29
Query Start/End: Original strand, 53 - 273
Target Start/End: Original strand, 8731 - 8952
Alignment:
Q  53 cccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaag 152  Q
    ||||||||  |||||||||| | ||| ||| |||| | || || | ||||||||||| | || |||||||| |||||||||| |||||||||||||||      
T  8731 cccaaggtgttcaaaatcgggattttgctttaggttgaaaaggtagagcaaaatcgaaaatcataaaatcgtaatcaaaatcgaaggattttactcaact 8830  T
Q  153 acttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggattttacc-aacnnnnnnnnntactaaatatatgttataaatggtata 251  Q
    ||||||||||||| ||| || ||| ||||||||| ||||| |||||| |||||||||||| ||          | ||||||||||||||||| | |||||    
T  8831 acttttgtagaatagatataagaacttgtaaaatcgcaatcaaaatcgatggattttaccaaaacaaagataatgctaaatatatgttataagttgtata 8930  T
Q  252 tagtcataaatgacttagttta 273  Q
    ||||||||||||||| ||||||    
T  8931 tagtcataaatgactcagttta 8952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0603; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 315 - 411
Target Start/End: Original strand, 9054 - 9150
Alignment:
Q  315 ctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||||| |||||| | |||||||||||||||   ||||||||| ||| ||||||||||||  ||||||  |||||| || |||||||||||||||||    
T  9054 ctatttaaggattttgctatggatttgagtcgttgaaggtgaataaaatcacaaaatcctacattttaaaatttaaatcaggattttgacaacaatg 9150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017 (Bit Score: 66; Significance: 5e-29; HSPs: 2)
Name: scaffold0017
Description:

Target: scaffold0017; HSP #1
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 54 - 175
Target Start/End: Original strand, 38300 - 38420
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    ||||||||||||||||||| ||||||||||| |||| |||| ||||||||||||| || ||||||||| |||||| | ||| ||||||||||||||  ||    
T  38300 ccaaggttgtcaaaatcgggactttacttcaagtcgaaaggaaatagcaaaatcgggactcgtaaaattgcaatc-agatcgaaggattttactcatgga 38398  T
Q  154 cttttgtagaatcgatctagga 175  Q
    |||||||||||||||| |||||    
T  38399 cttttgtagaatcgatgtagga 38420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0017; HSP #2
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 228 - 268
Target Start/End: Original strand, 38491 - 38531
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgactta 268  Q
    |||||||||||||||||| ||||||||||||||| ||||||    
T  38491 taaatatatgttataaattgtatatagtcataaaggactta 38531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061 (Bit Score: 61; Significance: 5e-26; HSPs: 2)
Name: scaffold0061
Description:

Target: scaffold0061; HSP #1
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 55 - 175
Target Start/End: Original strand, 76083 - 76202
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    |||||||||||||||||| ||||||||||  |||| |||| |||||||||  || || ||||||||| ||||| || ||| |||||||||||||||||||    
T  76083 caaggttgtcaaaatcgggactttacttccagtcgaaaggaaatagcaaacccgggactcgtaaaattgcaat-aagatcgaaggattttactcaaagac 76181  T
Q  155 ttttgtagaatcgatctagga 175  Q
    ||||||||||||||| |||||    
T  76182 ttttgtagaatcgatgtagga 76202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0061; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 228 - 263
Target Start/End: Original strand, 76273 - 76308
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatg 263  Q
    |||||||||||||||||| |||||||||||||||||    
T  76273 taaatatatgttataaattgtatatagtcataaatg 76308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0182 (Bit Score: 57; Significance: 1e-23; HSPs: 1)
Name: scaffold0182
Description:

Target: scaffold0182; HSP #1
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 63 - 175
Target Start/End: Complemental strand, 24733 - 24621
Alignment:
Q  63 tcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtag 162  Q
    ||||||||  |||||||||||| |||| |||||| ||||||||||| || ||||||||| | ||||||||||||| |||||||||||||   ||||||||    
T  24733 tcaaaatcaaaactttacttcaagtcgaaagggagtagcaaaatcgggactcgtaaaattgtaatcaaaatcaaaagattttactcaaatttttttgtag 24634  T
Q  163 aatcgatctagga 175  Q
    ||||||| |||||    
T  24633 aatcgatgtagga 24621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2084 (Bit Score: 52; Significance: 1e-20; HSPs: 1)
Name: scaffold2084
Description:

Target: scaffold2084; HSP #1
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 54 - 157
Target Start/End: Complemental strand, 184 - 81
Alignment:
Q  54 ccaaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaaga 153  Q
    |||||||| |||||||||| ||||||||||| |||  |||||| ||||||||||| || ||||||||| | ||| |||||| ||||||||||||||| ||    
T  184 ccaaggttatcaaaatcgggactttacttcaagtcaaaagggagtagcaaaatcgggactcgtaaaattgtaattaaaatcgaaggattttactcaagga 85  T
Q  154 cttt 157  Q
    ||||    
T  84 cttt 81  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0534 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0534
Description:

Target: scaffold0534; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 55 - 192
Target Start/End: Complemental strand, 1025 - 888
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||| | |||||| | | ||| |||||||||  ||||||| |||||||| || | ||||||||| |||||||||||| ||| |||||||||||  ||    
T  1025 caaggtttttaaaatcaggattttgcttcaggtcaaaagggaagagcaaaattgaaaatcgtaaaattgcaatcaaaatcgaagaattttactcaactac 926  T
Q  155 ttttgtagaatcgatctaggaaattgtaaaatagcaat 192  Q
    ||||||||||  ||| || ||||||||||||| |||||    
T  925 ttttgtagaacagatataagaaattgtaaaatcgcaat 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027 (Bit Score: 47; Significance: 1e-17; HSPs: 2)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 113 - 175
Target Start/End: Original strand, 132947 - 133009
Alignment:
Q  113 tcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctagga 175  Q
    |||||||||||||||||||||| ||||||||| ||||| |||||||||||||||||| |||||    
T  132947 tcgtaaaatcgcaatcaaaatcgaaggattttcctcaaggacttttgtagaatcgatgtagga 133009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0027; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 228 - 265
Target Start/End: Original strand, 133075 - 133112
Alignment:
Q  228 taaatatatgttataaatggtatatagtcataaatgac 265  Q
    |||||||||||||||||| | |||||||||||||||||    
T  133075 taaatatatgttataaattgcatatagtcataaatgac 133112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 56 - 169
Target Start/End: Complemental strand, 145942 - 145829
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    |||||||||||||| |  | ||| |||||||||| |||  |||||  ||||||| | ||||||||| |||||||||||| ||||||||||||||   |||    
T  145942 aaggttgtcaaaattgagattttgcttcaggtcgaaagaaaatagttaaatcgaaaatcgtaaaatagcaatcaaaatcgaaggattttactcacttact 145843  T
Q  156 tttgtagaatcgat 169  Q
    ||||||||||||||    
T  145842 tttgtagaatcgat 145829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048 (Bit Score: 43; Significance: 0.000000000000003; HSPs: 3)
Name: scaffold0048
Description:

Target: scaffold0048; HSP #1
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 56 - 186
Target Start/End: Original strand, 61089 - 61219
Alignment:
Q  56 aaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagact 155  Q
    ||||||| ||||||||| | ||| |||||||||  ||| ||| || |||||  | | |||||||||| ||||||||||| ||| |||||||| ||  |||    
T  61089 aaggttgccaaaatcgggattttgcttcaggtcaaaagagaaaagtaaaatttaaaatcgtaaaatcacaatcaaaatcgaagaattttacttaactact 61188  T
Q  156 tttgtagaatcgatctaggaaattgtaaaat 186  Q
    |||||||||||||| || ||||| |||||||    
T  61189 tttgtagaatcgatatatgaaatcgtaaaat 61219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0048; HSP #2
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 318 - 411
Target Start/End: Original strand, 48825 - 48918
Alignment:
Q  318 ttttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaatg 411  Q
    |||| |||||||  ||||||||||||||   ||||||||| |||||  |||||| || |||||||| ||||||||||| ||||| |||||||||    
T  48825 ttttgggattctcatatggatttgagtcgttgaaggtgaataaagttgcaaaattctagattttaggatttaagtcggaattttcacaacaatg 48918  T

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Target: scaffold0048; HSP #3
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 116 - 210
Target Start/End: Original strand, 48497 - 48591
Alignment:
Q  116 taaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctaggaaattgtaaaatagcaattaaaatcaatggatttta 210  Q
    ||||||| ||||||||||| |||||||||||| ||  |||||||||||||||||  | ||| | ||||||| || || |||||| ||||| ||||    
T  48497 taaaatctcaatcaaaatcgaaggattttacttaactacttttgtagaatcgataaaagaagtcgtaaaatcgcgatcaaaatcgatggacttta 48591  T

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Target: scaffold0526 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0526
Description:

Target: scaffold0526; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 55 - 175
Target Start/End: Complemental strand, 8511 - 8391
Alignment:
Q  55 caaggttgtcaaaatcggaactttacttcaggtcggaagggaatagcaaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagac 154  Q
    ||||||| |||||||||| | ||||||| | |||| |||||| ||| ||||| | || || |||||| ||| |||||||| ||||||||||||||| ||     
T  8511 caaggttatcaaaatcgggagtttactttaagtcgaaagggagtagtaaaattgggactcataaaattgcagtcaaaatcgaaggattttactcaaggag 8412  T
Q  155 ttttgtagaatcgatctagga 175  Q
    || |||||||| ||| |||||    
T  8411 ttgtgtagaattgatatagga 8391  T

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Target: scaffold0036 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 306 - 411
Target Start/End: Original strand, 37191 - 37296
Alignment:
Q  306 ggattttttctattttaggattctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgaca 405  Q
    |||||||  |||||||| |||||| ||||||||||||||    ||||||||| ||| |  |||||| ||| ||||||  ||||||||||| |||||||||    
T  37191 ggattttacctattttaagattctgctatggatttgagttgttgaaggtgaataaaattgcaaaattctgaattttaaaatttaagtcggcattttgaca 37290  T
Q  406 acaatg 411  Q
    ||||||    
T  37291 acaatg 37296  T

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Target: scaffold0150 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 102 - 169
Target Start/End: Complemental strand, 33246 - 33179
Alignment:
Q  102 aaaatcgagattcgtaaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgat 169  Q
    |||||||| | | |||||||||||||||||||| ||| ||||||||||   |||||||||||||||||    
T  33246 aaaatcgaaaattgtaaaatcgcaatcaaaatcgaagaattttactcacttacttttgtagaatcgat 33179  T

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Target: scaffold0001 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 116 - 175
Target Start/End: Complemental strand, 142923 - 142864
Alignment:
Q  116 taaaatcgcaatcaaaatcaaaggattttactcaaagacttttgtagaatcgatctagga 175  Q
    |||||||||||| |||||  ||||||||||||||| || ||||||||||| ||| |||||    
T  142923 taaaatcgcaattaaaattgaaggattttactcaaggagttttgtagaatagatatagga 142864  T

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Target: scaffold0115 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0115
Description:

Target: scaffold0115; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 325 - 410
Target Start/End: Original strand, 35103 - 35188
Alignment:
Q  325 attctactatggatttgagtcagggaaggtgaagaaagtcacaaaatcctggattttagtatttaagtcgggattttgacaacaat 410  Q
    ||||||| ||| |||||||||    |||||||| |||||  ||||||  || ||||||| |||||||||| |||||||||||||||    
T  35103 attctacaatgaatttgagtcgttaaaggtgaataaagttccaaaattatgaattttagaatttaagtcgagattttgacaacaat 35188  T

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