View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20843_high_4 (Length: 324)
Name: NF20843_high_4
Description: NF20843
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20843_high_4 |
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Alignment Details
Target: chr8 (Bit Score: 275; Significance: 1e-154; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 275; E-Value: 1e-154
Query Start/End: Original strand, 10 - 296
Target Start/End: Complemental strand, 10194265 - 10193979
Alignment:
| Q |
10 |
ccacagacccttcagctgctgttccagaataaaccttcacttgctctgtccacttaggcacggtttttctgcaccacaaaattccaaagaataatgaaaa |
109 |
Q |
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| T |
10194265 |
ccacagacccttcagctgctgttccagaataaaccttcacttgctctgtccacttaggcacggtttttctgcaccacaaaattccaaagaataatgaaaa |
10194166 |
T |
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| Q |
110 |
ttatgagatcgtgaaccttggaaattcaccactaagttcaaaaggaaacaataattttgtaatttagtccaatataccttttcttagacacatgtttgtg |
209 |
Q |
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| T |
10194165 |
ttatgagatagtgaaccttgaaaattcaccactaagttcaaaaggaaacaataattttgtaatttaatccaatataccttttcttagacacatgtttgtg |
10194066 |
T |
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| Q |
210 |
cttgaactttgagtcttggacctcacttttagggcttccatttgaacaatgagaatccatcatgttgacattgtttgtcttaatttt |
296 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
10194065 |
cttgaactttgagtcttggacctcacttttagggcttccatttgaacaatgagaatccatcatgttgacattgtttgtcttaatttt |
10193979 |
T |
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