View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20846_high_7 (Length: 325)
Name: NF20846_high_7
Description: NF20846
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20846_high_7 |
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Alignment Details
Target: chr5 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 29 - 314
Target Start/End: Original strand, 32931352 - 32931641
Alignment:
| Q |
29 |
aagtactagaatttgtttatgtcagaagacatgtacttgtcatcattcattaaccattcacaaacacggttctttttcaactctttataatattcattca |
128 |
Q |
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| T |
32931352 |
aagtactagaatttgtttatgtcagaagacatgtacttgtcatcattcattaaccattcacaaacacggttctttttcaactctttataatattcattca |
32931451 |
T |
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| Q |
129 |
ttacgtaccattttaagaagtacgtgcaaattcaaatcatattatcaatttttaattcattttgttttctaaggaagtgtcgtggaaattccttcttctc |
228 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
32931452 |
ttacgtaccattttaagaagtacgtgcaaattcaaatcatattatcaatttttatttcattttgttttctaaggaattgtcgtggaaattccttcttctc |
32931551 |
T |
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| Q |
229 |
aaccactctcatcatgtacctatagg----aacaaacaaacaaacaacatagccattgcattttcattctgtgttttgttttgtgtctgt |
314 |
Q |
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|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
32931552 |
aaccactctcatcatgtacctataggaacaaacaaacaaacaaacaacatagccattgcattttcattctatgttttgttttgtgtctgt |
32931641 |
T |
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