View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2085-Insertion-20 (Length: 700)

Name: NF2085-Insertion-20
Description: NF2085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2085-Insertion-20
NF2085-Insertion-20
[»] chr3 (31 HSPs)
chr3 (8-700)||(41080536-41081227)
chr3 (395-527)||(14623807-14623939)
chr3 (395-528)||(8076392-8076525)
chr3 (398-526)||(13898026-13898154)
chr3 (387-527)||(17470405-17470545)
chr3 (395-527)||(35536626-35536758)
chr3 (395-527)||(49607414-49607546)
chr3 (395-527)||(53982011-53982143)
chr3 (395-486)||(1758424-1758516)
chr3 (386-527)||(33644200-33644341)
chr3 (387-527)||(8956762-8956902)
chr3 (400-522)||(26754700-26754822)
chr3 (361-431)||(11140967-11141037)
chr3 (399-523)||(30801705-30801829)
chr3 (387-527)||(54868855-54868995)
chr3 (424-527)||(27714888-27714991)
chr3 (395-526)||(31456690-31456821)
chr3 (387-522)||(52629305-52629440)
chr3 (410-527)||(26141515-26141632)
chr3 (395-520)||(35093592-35093717)
chr3 (465-527)||(11095392-11095453)
chr3 (399-527)||(24699926-24700054)
chr3 (401-505)||(36331303-36331407)
chr3 (395-527)||(36707396-36707524)
chr3 (400-474)||(48375679-48375754)
chr3 (410-527)||(11907371-11907488)
chr3 (399-480)||(25395305-25395387)
chr3 (395-527)||(33118818-33118951)
chr3 (395-436)||(43746430-43746471)
chr3 (406-504)||(25407126-25407225)
chr3 (401-528)||(47531864-47531991)
[»] chr2 (31 HSPs)
chr2 (354-526)||(41575138-41575311)
chr2 (395-527)||(17819972-17820104)
chr2 (395-527)||(9058480-9058612)
chr2 (395-527)||(33436068-33436200)
chr2 (395-524)||(28863458-28863587)
chr2 (395-527)||(7465703-7465835)
chr2 (395-527)||(17473020-17473152)
chr2 (395-527)||(20700815-20700947)
chr2 (401-527)||(26891478-26891604)
chr2 (361-527)||(33436211-33436377)
chr2 (400-505)||(3440001-3440106)
chr2 (395-524)||(19930788-19930917)
chr2 (395-527)||(13438343-13438475)
chr2 (400-483)||(3737986-3738070)
chr2 (401-505)||(2997461-2997565)
chr2 (395-527)||(10249350-10249482)
chr2 (395-527)||(40701478-40701610)
chr2 (387-527)||(45097695-45097835)
chr2 (404-527)||(40613879-40614002)
chr2 (401-486)||(38732394-38732480)
chr2 (395-527)||(32505616-32505748)
chr2 (387-527)||(43490121-43490261)
chr2 (401-527)||(28381629-28381755)
chr2 (401-527)||(30915463-30915589)
chr2 (401-527)||(42257193-42257319)
chr2 (395-446)||(44152008-44152059)
chr2 (423-527)||(5574484-5574588)
chr2 (401-486)||(13365393-13365479)
chr2 (465-527)||(27864704-27864765)
chr2 (395-527)||(4060685-4060817)
chr2 (401-437)||(41758677-41758713)
[»] chr4 (37 HSPs)
chr4 (361-527)||(3481654-3481820)
chr4 (394-527)||(50052395-50052528)
chr4 (395-527)||(29239886-29240018)
chr4 (395-527)||(50526139-50526271)
chr4 (395-527)||(6034044-6034176)
chr4 (364-527)||(29234182-29234345)
chr4 (387-489)||(48647686-48647789)
chr4 (395-528)||(41236346-41236479)
chr4 (387-536)||(42044327-42044476)
chr4 (395-527)||(480415-480547)
chr4 (395-487)||(28480236-28480329)
chr4 (395-487)||(28481111-28481204)
chr4 (395-487)||(28481986-28482079)
chr4 (395-527)||(48183017-48183149)
chr4 (401-527)||(54473507-54473633)
chr4 (401-527)||(55475191-55475317)
chr4 (401-482)||(18769021-18769103)
chr4 (395-527)||(11511430-11511562)
chr4 (401-505)||(17983717-17983821)
chr4 (395-527)||(23608235-23608367)
chr4 (395-527)||(24995075-24995207)
chr4 (401-527)||(55079687-55079814)
chr4 (401-527)||(19670690-19670816)
chr4 (387-527)||(44536706-44536845)
chr4 (401-505)||(50813866-50813970)
chr4 (399-482)||(18769153-18769237)
chr4 (456-527)||(29547989-29548059)
chr4 (418-504)||(29977908-29977994)
chr4 (401-486)||(29589714-29589800)
chr4 (465-527)||(40574779-40574840)
chr4 (401-505)||(18924469-18924573)
chr4 (395-527)||(47104544-47104676)
chr4 (387-527)||(47986208-47986348)
chr4 (465-527)||(31910192-31910253)
chr4 (456-505)||(32766980-32767028)
chr4 (456-528)||(8343193-8343264)
chr4 (352-436)||(32939587-32939671)
[»] chr8 (29 HSPs)
chr8 (395-527)||(37038479-37038611)
chr8 (395-526)||(5957831-5957962)
chr8 (401-527)||(43414555-43414681)
chr8 (395-528)||(1179908-1180041)
chr8 (395-527)||(12831047-12831179)
chr8 (395-505)||(8841400-8841510)
chr8 (401-527)||(40423917-40424043)
chr8 (395-527)||(14547922-14548054)
chr8 (395-527)||(34012264-34012396)
chr8 (401-527)||(16383377-16383503)
chr8 (361-522)||(10621021-10621182)
chr8 (395-527)||(504089-504221)
chr8 (403-527)||(15197333-15197457)
chr8 (387-483)||(15258889-15258986)
chr8 (395-527)||(17443825-17443957)
chr8 (395-527)||(23122565-23122697)
chr8 (401-527)||(34307216-34307342)
chr8 (361-527)||(20074876-20075034)
chr8 (387-527)||(4854823-4854963)
chr8 (395-482)||(9122229-9122317)
chr8 (401-527)||(16056375-16056501)
chr8 (401-527)||(24307767-24307893)
chr8 (401-527)||(30479448-30479574)
chr8 (387-527)||(15048141-15048281)
chr8 (395-527)||(10284599-10284731)
chr8 (403-527)||(42221515-42221639)
chr8 (395-438)||(42354556-42354599)
chr8 (395-527)||(44507055-44507187)
chr8 (444-528)||(14055610-14055693)
[»] chr6 (17 HSPs)
chr6 (395-527)||(31952998-31953130)
chr6 (395-527)||(32869678-32869810)
chr6 (394-485)||(12732523-12732615)
chr6 (395-527)||(17598554-17598686)
chr6 (401-524)||(22880632-22880755)
chr6 (401-532)||(30341334-30341465)
chr6 (401-527)||(15507998-15508124)
chr6 (401-527)||(15990016-15990142)
chr6 (395-523)||(28536456-28536582)
chr6 (387-527)||(6209425-6209565)
chr6 (395-527)||(11427616-11427750)
chr6 (387-485)||(23128087-23128186)
chr6 (401-527)||(31976248-31976374)
chr6 (394-522)||(9379679-9379807)
chr6 (395-527)||(29857827-29857959)
chr6 (399-482)||(30870058-30870142)
chr6 (401-511)||(4231564-4231674)
[»] chr1 (26 HSPs)
chr1 (395-527)||(51898651-51898783)
chr1 (387-527)||(9474836-9474976)
chr1 (395-527)||(47452288-47452420)
chr1 (395-527)||(27564703-27564835)
chr1 (395-527)||(37649198-37649330)
chr1 (395-522)||(44453984-44454111)
chr1 (401-527)||(2581915-2582041)
chr1 (401-527)||(32813247-32813373)
chr1 (395-524)||(44548344-44548473)
chr1 (401-527)||(5958974-5959100)
chr1 (401-527)||(38595154-38595280)
chr1 (401-527)||(50590974-50591100)
chr1 (395-527)||(8346355-8346488)
chr1 (387-527)||(41608453-41608593)
chr1 (387-527)||(50630458-50630598)
chr1 (401-528)||(3000318-3000445)
chr1 (395-485)||(13414802-13414893)
chr1 (399-527)||(6260870-6260998)
chr1 (395-527)||(38632289-38632421)
chr1 (395-527)||(48716250-48716382)
chr1 (386-483)||(48489343-48489441)
chr1 (395-527)||(41758805-41758937)
chr1 (395-526)||(11152346-11152476)
chr1 (456-527)||(23597121-23597191)
chr1 (395-527)||(43132-43264)
chr1 (354-394)||(23597008-23597048)
[»] chr5 (24 HSPs)
chr5 (387-527)||(2740274-2740414)
chr5 (395-524)||(18520852-18520981)
chr5 (387-527)||(6679698-6679838)
chr5 (395-527)||(35943860-35943992)
chr5 (401-527)||(2252142-2252268)
chr5 (395-527)||(33149606-33149738)
chr5 (395-527)||(33825292-33825424)
chr5 (395-527)||(36732910-36733042)
chr5 (401-532)||(3921239-3921370)
chr5 (396-527)||(40145407-40145538)
chr5 (387-446)||(2177445-2177504)
chr5 (401-527)||(28177775-28177901)
chr5 (401-527)||(42414276-42414402)
chr5 (387-527)||(13811652-13811792)
chr5 (395-527)||(14831814-14831946)
chr5 (395-527)||(35785199-35785331)
chr5 (467-526)||(36875644-36875702)
chr5 (406-527)||(6259980-6260101)
chr5 (465-522)||(10356639-10356696)
chr5 (399-482)||(21370048-21370132)
chr5 (395-482)||(31009032-31009120)
chr5 (415-477)||(25831334-25831397)
chr5 (401-527)||(26720516-26720642)
chr5 (401-527)||(26990265-26990391)
[»] chr7 (32 HSPs)
chr7 (393-527)||(18207180-18207313)
chr7 (387-527)||(35137533-35137673)
chr7 (395-485)||(36208214-36208305)
chr7 (395-527)||(19329842-19329974)
chr7 (387-527)||(38267040-38267180)
chr7 (395-527)||(41423682-41423814)
chr7 (395-527)||(8080351-8080483)
chr7 (387-527)||(38837217-38837357)
chr7 (401-527)||(7389389-7389515)
chr7 (387-485)||(27744269-27744368)
chr7 (401-527)||(40846087-40846213)
chr7 (395-524)||(3783998-3784127)
chr7 (386-527)||(35468814-35468955)
chr7 (423-527)||(3434562-3434666)
chr7 (395-527)||(4999482-4999614)
chr7 (423-527)||(36361909-36362013)
chr7 (401-504)||(8238236-8238339)
chr7 (406-504)||(2318222-2318320)
chr7 (401-527)||(22343361-22343487)
chr7 (401-527)||(32564400-32564526)
chr7 (401-527)||(41915741-41915867)
chr7 (401-486)||(16374798-16374884)
chr7 (456-538)||(46374832-46374913)
chr7 (395-527)||(19436155-19436287)
chr7 (423-527)||(36362026-36362130)
chr7 (403-527)||(39255900-39256023)
chr7 (401-522)||(35522881-35523002)
chr7 (395-527)||(40957707-40957839)
chr7 (403-482)||(3694411-3694491)
chr7 (465-536)||(10343602-10343672)
chr7 (401-527)||(38044197-38044323)
chr7 (401-478)||(32951467-32951545)
[»] scaffold1268 (1 HSPs)
scaffold1268 (395-527)||(897-1029)
[»] scaffold1267 (1 HSPs)
scaffold1267 (395-527)||(897-1029)
[»] scaffold0321 (1 HSPs)
scaffold0321 (387-527)||(10069-10209)
[»] scaffold0237 (1 HSPs)
scaffold0237 (395-527)||(4029-4161)
[»] scaffold0018 (1 HSPs)
scaffold0018 (387-502)||(152523-152638)


Alignment Details
Target: chr3 (Bit Score: 566; Significance: 0; HSPs: 31)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 566; E-Value: 0
Query Start/End: Original strand, 8 - 700
Target Start/End: Complemental strand, 41081227 - 41080536
Alignment:
Q  8 ggatagctatccaatatttggccaattccttttagaagtttctacagagatttaagcctcaaatagttagatgcaactaatgaaaatttgaaatgctatt 107  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41081227 ggatagctatccaatatttggccaattccttttagaagtttctacagagatttaagcctcaaatagttagatgcaactaataaaaatttgaaatgctatt 41081128  T
Q  108 ttttaaaaatctcaattggccgttttcttgctctaccttaattttccaaacaataaatctgaacctatttaagaaagaaaaatattgaagtaggaaaata 207  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41081127 ttttaaaaatctcaattggccgttttcttgctctaccttaattttccaaacaataaatctgaacctatttaagaaagaaaaatattgaagtaggaaaata 41081028  T
Q  208 ccagcactagttcaccgggttttagtggaaattcctccatgcatgttattttgctgcaatatgcacacccgtttaataattactatagaagattaacatg 307  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  41081027 ccagcactagttcaccaggttttagtggaaattcctccatgcatgttattttgctgcaatatgcacactcgtttaataattactatagaagattaacatg 41080928  T
Q  308 tttagaatattaggatttatttaacca-tgaacacacgattttgttaagaaaagtgttacatagacagtctttattctcatacatcctatgcactaggaa 406  Q
    |||||||||||| |||||||||||||| ||||||||||||||||||||| ||| ||||||| | ||| |||||||||||||||| |||||| ||||||||    
T  41080927 tttagaatattatgatttatttaaccattgaacacacgattttgttaaggaaaatgttacacaaacactctttattctcatacaccctatgtactaggaa 41080828  T
Q  407 gagagaaaaggagatgaaagagaaaatgtgctcgtgtgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaa 506  Q
    ||||||| |||||||||||||||||||||||| |||||||||||||| ||||||| | ||||||||| ||||||||||| |||||||||||| | ||||     
T  41080827 gagagaagaggagatgaaagagaaaatgtgcttgtgtgggtccacatgaccacatatcagatttttgcgtgggtgtcaa-agggtgttttgcta-ctaag 41080730  T
Q  507 gatgtccatgtatcattactcgttgttaaagtcacacaaagctggcatatcataataatacctaataagaaatttcccttcaacttcttcaaacataaag 606  Q
    |||||| ||||||||||||||||||||||||||| | | || ||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  41080729 gatgtctatgtatcattactcgttgttaaagtcatagagagttggtatatcataataatacctaataagaaatttcccttcaacttcttcaaacgtaaag 41080630  T
Q  607 aatctgcatccatttgtgaagggtaacttcttttctttccacactgcaaatagttatgtgaagttaaacagacgtatgagtccgaataagctat 700  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41080629 aatctgcatccatttgtgaagggtaacttcttttctttccacactgcaaatagttatgtgaagttaaacagacgtatgagtccgaataagctat 41080536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 14623807 - 14623939
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||| ||||||||| || |||||||||||||| |||||| ||||| ||||||||| | ||||||| |||||||| ||||||||||||| ||||||    
T  14623807 atgcactagaaagagagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaag-gggtgt 14623905  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| |||||| ||||||||||||||    
T  14623906 attgccacctaaggatgtctatgtatcattactc 14623939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 395 - 528
Target Start/End: Complemental strand, 8076525 - 8076392
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| |||  |||||||| | || || ||||||||||||||||||||||||| |||||||    
T  8076525 atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaa-agggtgt 8076427  T
Q  494 tttgccacctaaagatgtccatgtatcattactcg 528  Q
      |||||||||| | |||  |||||||||||||||    
T  8076426 actgccacctaagggtgtttatgtatcattactcg 8076392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 398 - 526
Target Start/End: Original strand, 13898026 - 13898154
Alignment:
Q  398 cactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgtttt 496  Q
    ||||||| |||||||| || |||||||||||||| |||||| ||||| ||||||||| | ||| ||| |||||||| ||||||||||||| |||||| ||    
T  13898026 cactagggagagagaagagaagatgaaagagaaagtgtgcttgtgtgaggtccacatgaacacgtgtcagatttttatgtgggtgtcaag-gggtgtatt 13898124  T
Q  497 gccacctaaagatgtccatgtatcattact 526  Q
    ||||||||| |||||  || ||||||||||    
T  13898125 gccacctaaggatgtttatctatcattact 13898154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 17470545 - 17470405
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| | ||||  ||||||||| |||||| |||| |||||||| | || || ||| |||||||||||||||||| ||    
T  17470545 tacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgttaa 17470446  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     | ||||| ||||||||||||| |||| ||||||||||||||    
T  17470445 -aaggtgtattgccacctaaaggtgtctatgtatcattactc 17470405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 35536758 - 35536626
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| || ||||||||||| || |||||| ||||  ||||||||| ||||| ||| | |||||| |||||||||||| | |||||    
T  35536758 atgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaccacgtgtcacatttttatgtgggtgtcaa-atggtgt 35536660  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||| |||||| ||||||||||||||    
T  35536659 attgccacataaggatgtctatgtatcattactc 35536626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 49607546 - 49607414
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| |||||||||| || ||||||  ||||||||| |||||| ||||||| ||||| | || || ||| ||||||||||||||||||||| |||||||    
T  49607546 atgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 49607448  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  49607447 attgccacctaagggtgtctatgtatcattactc 49607414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 53982143 - 53982011
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| |||||||    
T  53982143 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 53982045  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  53982044 attgccacctaagggtgtctatgtatcattactc 53982011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 395 - 486
Target Start/End: Original strand, 1758424 - 1758516
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaag 486  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | |||||| |||||| | |||| |||| ||||||||||||||||||||||    
T  1758424 atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggagtccacgtaaccatatgtcagatttttgtgtgggtgtcaag 1758516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 386 - 527
Target Start/End: Complemental strand, 33644341 - 33644200
Alignment:
Q  386 atacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtca 484  Q
    ||||| || ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||    
T  33644341 atacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtca 33644242  T
Q  485 agagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | ||||||| |||||||| || | |||| ||||||||||||||    
T  33644241 a-agggtgtattgccacccaagggtgtctatgtatcattactc 33644200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 8956902 - 8956762
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| ||| |||||||||||||||||| || ||||||||||| || |||||| ||||  ||||||||| | ||| ||| | |||||| ||||||||||||    
T  8956902 tacaccctgtgcactaggaagagagaagagaagatgaaagaggaagtgtgcttgtgtaaggtccacatgaacacgtgtcacatttttatgtgggtgtcaa 8956803  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||| ||||||| ||| |||||| ||||||||||||||    
T  8956802 -aggatgtattgccacataaggatgtctatgtatcattactc 8956762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 400 - 522
Target Start/End: Complemental strand, 26754822 - 26754700
Alignment:
Q  400 ctaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgc 498  Q
    |||||||||||||| |||||| ||||||||||||||||| |||  |||||||  | ||||||||| |||||||||||||| |||| | ||||||| ||||    
T  26754822 ctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgtcagatttttgtgtggatgtcca-agggtgtattgc 26754724  T
Q  499 cacctaaagatgtccatgtatcat 522  Q
    ||||||| | |||| ||| |||||    
T  26754723 cacctaagggtgtctatgaatcat 26754700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 361 - 431
Target Start/End: Original strand, 11140967 - 11141037
Alignment:
Q  361 tgttacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaa 431  Q
    |||||||||||||  ||||| ||||||||| || ||| |||||||||||||||||||||||||||||||||    
T  11140967 tgttacatagacaccctttagtctcatacaccccatgtactaggaagagagaaaaggagatgaaagagaaa 11141037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 399 - 523
Target Start/End: Original strand, 30801705 - 30801829
Alignment:
Q  399 actaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttg 497  Q
    ||||||||||||||| | |||| ||||||||||||||||| |||| ||||||| || || |||||| | |||||||||||||| |||| ||||||| ||     
T  30801705 actaggaagagagaagatgagaggaaagagaaaatgtgcttgtgtggggtccatatgactacatgtcatatttttgtgtgggtatcaa-agggtgtatta 30801803  T
Q  498 ccacctaaagatgtccatgtatcatt 523  Q
     ||||||| | |||| ||||||||||    
T  30801804 tcacctaagggtgtctatgtatcatt 30801829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 54868855 - 54868995
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| |||||||| ||||||||||||| | ||||  ||||||||| |||| | ||| ||| ||||| | || || ||| |||||||||||||||||||||    
T  54868855 tacaccctatgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaa 54868954  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||| ||||||||||| | |||| ||||||||||||||    
T  54868955 aagg-tgtattgccacctaagggtgtctatgtatcattactc 54868995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 424 - 527
Target Start/End: Original strand, 27714888 - 27714991
Alignment:
Q  424 aagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcat 522  Q
    |||||||| |||||| ||| ||| ||||||| || || ||| ||||||||||||||||||||| ||||||| || |||||||||| |||| |||||||||    
T  27714888 aagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaa-agggtgtattaccacctaaaggtgtctatgtatcat 27714986  T
Q  523 tactc 527  Q
    |||||    
T  27714987 tactc 27714991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 395 - 526
Target Start/End: Complemental strand, 31456821 - 31456690
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| |||||||||| || ||||||  ||||||||| |||||| ||| ||| ||||||| || || ||| ||||||||||||||||||||| |||||||    
T  31456821 atgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 31456723  T
Q  494 tttgccacctaaagatgtccatgtatcattact 526  Q
     ||||| ||||  | |||| |||||||||||||    
T  31456722 attgccgcctatgggtgtctatgtatcattact 31456690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 387 - 522
Target Start/End: Complemental strand, 52629440 - 52629305
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgt-gtgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| | ||||  ||||||||| |||||| ||   |||||||| | || || ||| |||||||||||||||||||||    
T  52629440 tacatcccatgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 52629341  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcat 522  Q
     ||||||| ||||||||||| | |||| |||||||||    
T  52629340 -agggtgtattgccacctaagggtgtctatgtatcat 52629305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 410 - 527
Target Start/End: Original strand, 26141515 - 26141632
Alignment:
Q  410 agaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaaga 508  Q
    |||| ||||||  ||||||||| |||||| ||||||| ||||  | ||||| ||| |||||||||||||||||| || ||||||| ||||||||||| ||    
T  26141515 agaagaggagagaaaagagaaagtgtgcttgtgtggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaa-agggtgtattgccacctaagga 26141613  T
Q  509 tgtccatgtatcattactc 527  Q
    |||| ||||||||| ||||    
T  26141614 tgtctatgtatcataactc 26141632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 520
Target Start/End: Complemental strand, 35093717 - 35093592
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    |||||||||||||||||||||  ||||| |||||||| |||||| || ||| || ||||| ||||||||| ||||||||| |||| |||||| | | |||    
T  35093717 atgcactaggaagagagaaaaaaagatgcaagagaaagtgtgcttgtatggagttcacatgaccacatgtcagatttttgcgtggatgtcaa-atgttgt 35093619  T
Q  494 tttgccacctaaagatgtccatgtatc 520  Q
     ||| ||||||||| |||| |||||||    
T  35093618 attgtcacctaaagttgtctatgtatc 35093592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 465 - 527
Target Start/End: Original strand, 11095392 - 11095453
Alignment:
Q  465 agatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    ||||||||||||||||||||| ||||||| ||||||||||| | |||| ||||||||||||||    
T  11095392 agatttttgtgtgggtgtcaa-agggtgtattgccacctaagggtgtctatgtatcattactc 11095453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 527
Target Start/End: Original strand, 24699926 - 24700054
Alignment:
Q  399 actaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttg 497  Q
    ||||||||||||||| |||||| |||||||||| |||| | ||   |||||||| |  |||| ||  |||||||| |||||||||||| ||| ||| |||    
T  24699926 actaggaagagagaagaggagaggaaagagaaagtgtgtttgtacagggtccacgtggccacgtgccagatttttatgtgggtgtcaaaagg-tgtattg 24700024  T
Q  498 ccacctaaagatgtccatgtatcattactc 527  Q
    ||| |||| |||||| ||||||||||||||    
T  24700025 ccaactaaggatgtctatgtatcattactc 24700054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 505
Target Start/End: Original strand, 36331303 - 36331407
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||  |||||    
T  36331303 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgcattgcc 36331401  T
Q  500 acctaa 505  Q
    ||||||    
T  36331402 acctaa 36331407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 36707396 - 36707524
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgtt 494  Q
    ||||| ||||||||||||| ||||||  ||||||||| ||||| ||   || ||||| | || || ||| |||||||||||||| |||||| |||||||     
T  36707396 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcgcg---ggatccacgtaactacgtgtcagatttttgtgtggatgtcaa-agggtgta 36707491  T
Q  495 ttgccacctaaagatgtccatgtatcattactc 527  Q
    ||| ||||||| | | || ||||||||||||||    
T  36707492 ttgtcacctaagggtatctatgtatcattactc 36707524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 400 - 474
Target Start/End: Original strand, 48375679 - 48375754
Alignment:
Q  400 ctaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgt 474  Q
    |||||||||||||| |||||| ||||||||||||||||| |||  |||||||  | |||||| || ||||||||||    
T  48375679 ctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacacgtcagatttttgt 48375754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 410 - 527
Target Start/End: Complemental strand, 11907488 - 11907371
Alignment:
Q  410 agaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaaga 508  Q
    |||| ||||||  |||||||||||||||| ||| ||| |||| || ||||||||| ||||||||||||| ||||  || | |||| ||| ||||||| |     
T  11907488 agaagaggagagaaaagagaaaatgtgcttgtgcggggtccatatgaccacatgtcagatttttgtgtgagtgttcag-gtgtgtattgtcacctaaggg 11907390  T
Q  509 tgtccatgtatcattactc 527  Q
    |||| ||||||||| ||||    
T  11907389 tgtctatgtatcataactc 11907371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 399 - 480
Target Start/End: Original strand, 25395305 - 25395387
Alignment:
Q  399 actaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggt 480  Q
    ||||| |||||| || || ||||||||||||||||||| | |||| ||||| | ||  |||||||| ||||||||||||||||    
T  25395305 actagaaagagaaaagagaagatgaaagagaaaatgtgtttgtgtggggtctatatagccacatgtcagatttttgtgtgggt 25395387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 33118818 - 33118951
Alignment:
Q  395 atgcactaggaagagagaaa-aggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtg 492  Q
    |||||||||| ||||||||  |||||| |||||||||| |||| |  || ||| ||||| | || || ||| | ||||||||||||||||||| ||||||    
T  33118818 atgcactagggagagagaaggaggagaggaaagagaaagtgtgtttctgagggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaa-agggtg 33118916  T
Q  493 ttttgccacctaaagatgtccatgtatcattactc 527  Q
    | ||| ||||||| | |||| ||||||||| ||||    
T  33118917 tattgtcacctaagggtgtctatgtatcataactc 33118951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 436
Target Start/End: Complemental strand, 43746471 - 43746430
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtg 436  Q
    |||||||||||||| |||| ||||||||||||||||| ||||    
T  43746471 atgcactaggaagaaagaagaggagatgaaagagaaattgtg 43746430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 25407126 - 25407225
Alignment:
Q  406 agagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttaga-tttttgtgtgggtgtcaagagggtgttttgccacct 503  Q
    |||||||| ||||||||||||||||| |||| | ||||||| |||| || | ||| ||| ||| |||||||||| |||||||| |||| | |||||||||    
T  25407126 agagagaagaggagatgaaagagaaagtgtgtttgtgtgggatccatatgatcacgtgtcagattttttgtgtgtgtgtcaag-gggtatattgccacct 25407224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 401 - 528
Target Start/End: Complemental strand, 47531991 - 47531864
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||||||||| |||||| |||  |||| || ||  |||| ||| ||||| |||||||| ||| || | ||||| |||||    
T  47531991 taggaagagagaataggagagaaaagagaaagtgtgcttgtgcggggttcatatggccacgtgtcagattcttgtgtggatgttaa-aaggtgtattgcc 47531893  T
Q  500 acctaaagatgtccatgtatcattactcg 528  Q
    | |||| |||||| ||||||||| |||||    
T  47531892 atctaaggatgtctatgtatcataactcg 47531864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 76; Significance: 9e-35; HSPs: 31)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 76; E-Value: 9e-35
Query Start/End: Original strand, 354 - 526
Target Start/End: Complemental strand, 41575311 - 41575138
Alignment:
Q  354 agaaaagtgttacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt--gggtccac 451  Q
    |||||| ||||||||||||| | ||||||||||||||||  ||||| ||||| ||||||| ||||||||||||||||| |||||| ||||  ||||||||    
T  41575311 agaaaaatgttacatagacactatttattctcatacatctcatgcattaggacgagagaagaggagatgaaagagaaagtgtgcttgtgtaggggtccac 41575212  T
Q  452 attaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattact 526  Q
    || ||||||||| | |||||||||||  |||||| ||||||| || ||| |||| |||||| |||||||||||||    
T  41575211 atgaccacatgtcaaatttttgtgtgaatgtcaa-agggtgtattaccatctaaggatgtctatgtatcattact 41575138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 17819972 - 17820104
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| |||||||||||||||||||||| | |||| |||||||| | ||||||||| |||||||||||||||||||||| ||||||    
T  17819972 atgcattaggaagagagaagaggagatgaaagagaaaatgtgtttgtgtggggtccacgtaaccacatgtcagatttttgtgtgggtgtcaag-gggtgt 17820070  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||| || |||| ||||||||| ||||    
T  17820071 attgccacctatagttgtctatgtatcataactc 17820104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 9058612 - 9058480
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||||| || || ||| ||||||||||||||||||||| |||||||    
T  9058612 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 9058514  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  9058513 attgccacctaagggtgtctatgtatcattactc 9058480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 33436068 - 33436200
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | |||| |||||||||| |||||| ||| ||| ||||| | || || ||||||||||||||||||||||||| |||||||    
T  33436068 atgcattaggaagagagaagatgagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaa-agggtgt 33436166  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  33436167 attgccacctaagggtgtctatgtatcattactc 33436200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 395 - 524
Target Start/End: Complemental strand, 28863587 - 28863458
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||| ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| |||||||    
T  28863587 atgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 28863489  T
Q  494 tttgccacctaaagatgtccatgtatcatta 524  Q
     ||||||||||| | |||| |||||||||||    
T  28863488 attgccacctaagggtgtctatgtatcatta 28863458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 7465703 - 7465835
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||| ||||||||| |||||| |||| |||||||| | || || ||| ||||||||||||||||||||| |||||||    
T  7465703 atgcattaggaagagagaagaagagataaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 7465801  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||| |||| | |||| ||||||||||||||    
T  7465802 attgccatctaagggtgtctatgtatcattactc 7465835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 17473152 - 17473020
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| |||||||    
T  17473152 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 17473054  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||| |||| | |||| ||||||||||||||    
T  17473053 attgccatctaagggtgtctatgtatcattactc 17473020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 20700947 - 20700815
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||||||||| ||||||  ||  |||||||| | || || ||| |||||||||||| || ||||| |||||||    
T  20700947 atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtaggagtcaa-agggtgt 20700849  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||| |||||| ||||||||||||||    
T  20700848 attgccacataaggatgtctatgtatcattactc 20700815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 26891478 - 26891604
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| ||||||||||||||||| ||  | ||||||| | ||||||||| ||||||||||||||||||| || |||||| |||||    
T  26891478 taggaagagagaagagaagaggaaagagaaaatgtgcttgttcgaggtccacgtgaccacatgtcagatttttgtgtgggtgtctag-gggtgtattgcc 26891576  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | || | ||||||||| ||||    
T  26891577 acctaagggtggctatgtatcataactc 26891604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 361 - 527
Target Start/End: Complemental strand, 33436377 - 33436211
Alignment:
Q  361 tgttacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccac 459  Q
    |||||||||||||   |||||||||||||| |  ||| ||||||||||||||| |||| | |||||||||| |||||| |||    ||||||||   |||    
T  33436377 tgttacatagacaccttttattctcatacacctcatgaactaggaagagagaagaggataggaaagagaaagtgtgcttgtgcaaagtccacatggtcac 33436278  T
Q  460 atgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| |||||||| |||||||||||| | ||||| |||||| |||| |||||| ||||||||||||||    
T  33436277 gtgtcagatttttatgtgggtgtcaa-aaggtgtattgccatctaaggatgtctatgtatcattactc 33436211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 400 - 505
Target Start/End: Complemental strand, 3440106 - 3440001
Alignment:
Q  400 ctaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgc 498  Q
    |||| ||||||||| |||||| ||||||||||||||||| ||| ||| ||||| | | ||||||||||||||||||||||||||| || | |||| ||||    
T  3440106 ctagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccacgtaatcacatgttagatttttgtgtgggtgtccag-gagtgtattgc 3440008  T
Q  499 cacctaa 505  Q
    |||||||    
T  3440007 cacctaa 3440001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 524
Target Start/End: Original strand, 19930788 - 19930917
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||| | |||  |||||||||| || || ||| |||||||||||||| |||||| |||||||    
T  19930788 atgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaa-agggtgt 19930886  T
Q  494 tttgccacctaaagatgtccatgtatcatta 524  Q
     ||||||||||| | |||| |||||||||||    
T  19930887 attgccacctaagggtgtctatgtatcatta 19930917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 13438475 - 13438343
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| ||| |||    
T  13438475 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aggatgt 13438377  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| | |||| ||||||||||||||    
T  13438376 attgtcacctaagggtgtctatgtatcattactc 13438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 400 - 483
Target Start/End: Complemental strand, 3738070 - 3737986
Alignment:
Q  400 ctaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtc 483  Q
    ||||||||| |||| |||||| |||| |||||||||||| ||| ||| ||||||| ||||||||| |||||||||||||||||||    
T  3738070 ctaggaagaaagaagaggagaggaaaaagaaaatgtgcttgtgcggggtccacatgaccacatgtcagatttttgtgtgggtgtc 3737986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 505
Target Start/End: Original strand, 2997461 - 2997565
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  2997461 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 2997559  T
Q  500 acctaa 505  Q
    ||||||    
T  2997560 acctaa 2997565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 10249350 - 10249482
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| |||||||||| || ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| | |||||    
T  10249350 atgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aaggtgt 10249448  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| | |||| ||||||||||||||    
T  10249449 attgtcacctaagggtgtctatgtatcattactc 10249482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 40701610 - 40701478
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||  ||||||||| |||| | ||| ||| ||||| | || || ||| ||||||||||||||||||||| ||| |||    
T  40701610 atgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcggggtccacgtaactacgtgtcagatttttgtgtgggtgtcaaaagg-tgt 40701512  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  40701511 attgccacctaagggtgtctatgtatcattactc 40701478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 45097695 - 45097835
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||| | ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||| ||||||||||    
T  45097695 tacatccgatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtatgggtgtcaa 45097794  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | || ||| ||||||||||| |||||  ||||||||| ||||    
T  45097795 g-ggatgtattgccacctaaggatgtttatgtatcataactc 45097835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 404 - 527
Target Start/End: Original strand, 40613879 - 40614002
Alignment:
Q  404 gaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacc 502  Q
    ||||| |||| ||||||  ||||||||| |||||| ||| ||| ||||  |  |||| ||| ||||||||||||||||||||| ||||||| ||||||||    
T  40613879 gaagaaagaataggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttgtgtgggtgtcaa-agggtgtattgccacc 40613977  T
Q  503 taaagatgtccatgtatcattactc 527  Q
    ||| |||||| ||||||||| ||||    
T  40613978 taaggatgtctatgtatcataactc 40614002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 38732480 - 38732394
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaag 486  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| || ||||||||| ||||||||||||||||||||||    
T  38732480 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaag 38732394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 32505616 - 32505748
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| || |||||||||| ||||||  ||| ||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| | |||||    
T  32505616 atgcattaagaagagagaagaggagagaaaatagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aaggtgt 32505714  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| | |||| ||||||||||||||    
T  32505715 attgtcacctaagggtgtctatgtatcattactc 32505748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 43490261 - 43490121
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| |||||| | ||||||||||||| || ||| |||||| ||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||    
T  43490261 tacaccctatgtattaggaagagagaagagaagaagaaagataaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaa 43490162  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | |||||| ||| ||||||| | |||  ||||||||| ||||    
T  43490161 g-gggtgtattgtcacctaagggtgtttatgtatcataactc 43490121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 28381629 - 28381755
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| | ||||  ||||||||| |||||| ||| || |||||  | || || ||| ||||||||||||||||||| | ||| ||| |||||    
T  28381629 taggaagagagaagatgagagaaaagagaaagtgtgcttgtgcggagtccatgtgactacgtgtcagatttttgtgtgggtgtcgaaagg-tgtattgcc 28381727  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||| ||||||||||||||    
T  28381728 acctaagggtgtctatgtatcattactc 28381755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 30915589 - 30915463
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| | ||||  ||||||||| |||||| ||  ||| ||||| | || || ||| |||||||| |||||| ||||| ||||||| |||||    
T  30915589 taggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttatgtgggggtcaa-agggtgtattgcc 30915491  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||| ||||||||||||||    
T  30915490 acctaagggtgtctatgtatcattactc 30915463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 42257319 - 42257193
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    |||||||| |||| ||||||  ||||||||| |||||| ||| ||| ||||  |  |||| ||| |||||||| |||||||||||| | | ||| |||||    
T  42257319 taggaagaaagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtggccacgtgtcagatttttatgtgggtgtcaa-atgatgtattgcc 42257221  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    ||||||||||||| ||||||||| ||||    
T  42257220 acctaaagatgtctatgtatcataactc 42257193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 395 - 446
Target Start/End: Complemental strand, 44152059 - 44152008
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg 446  Q
    ||||| ||||||||||||| ||||||||||||||||| |||||| |||||||    
T  44152059 atgcattaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggg 44152008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 423 - 527
Target Start/End: Original strand, 5574484 - 5574588
Alignment:
Q  423 aaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatca 521  Q
    ||||||||| |||||| ||| ||| ||||| | || || ||| |||||||| |||||||||||| ||||||| |||||||||||   |||| ||||||||    
T  5574484 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaa-agggtgtattgccacctaagagtgtctatgtatca 5574582  T
Q  522 ttactc 527  Q
    ||||||    
T  5574583 ttactc 5574588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 486
Target Start/End: Complemental strand, 13365479 - 13365393
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaag 486  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||   ||||||| ||||||||||||||||||||||    
T  13365479 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaag 13365393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 527
Target Start/End: Complemental strand, 27864765 - 27864704
Alignment:
Q  465 agatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    |||||||||||||| |||||| ||||||| ||||||| ||| | |||| ||||||||||||||    
T  27864765 agatttttgtgtggatgtcaa-agggtgtattgccacataagggtgtctatgtatcattactc 27864704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 4060817 - 4060685
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||  ||| ||||| ||||||  || ||| ||||| | || || ||| |||||||||||||| |||||| ||| |||    
T  4060817 atgcattaggaagagagaagatgagagaaaaaagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtggatgtcaaaagg-tgt 4060719  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| | |||| ||||||||||||||    
T  4060718 attgtcacctaagggtgtctatgtatcattactc 4060685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 401 - 437
Target Start/End: Complemental strand, 41758713 - 41758677
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgc 437  Q
    ||||||||||||| ||||||| |||||||||||||||    
T  41758713 taggaagagagaagaggagataaaagagaaaatgtgc 41758677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 72; Significance: 2e-32; HSPs: 37)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 361 - 527
Target Start/End: Complemental strand, 3481820 - 3481654
Alignment:
Q  361 tgttacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccac 459  Q
    |||||||||||||  ||||||||||||||| |||||||||||| ||||||||| | | || |||||||||| |||||| |||| |||||||| | || |     
T  3481820 tgttacatagacaccctttattctcatacaccctatgcactagaaagagagaagatgggaggaaagagaaagtgtgcttgtgtggggtccacgtgactat 3481721  T
Q  460 atgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||||||||||||||||| || |||| ||||||||||||| |||| ||||||||||||||    
T  3481720 gtgtcagatttttgtgtgggtgtcaa-agagtgtattgccacctaaaggtgtctatgtatcattactc 3481654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 394 - 527
Target Start/End: Original strand, 50052395 - 50052528
Alignment:
Q  394 tatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtg 492  Q
    |||||||||||||||||||| |||||| |||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| ||||||    
T  50052395 tatgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtg 50052493  T
Q  493 ttttgccacctaaagatgtccatgtatcattactc 527  Q
    | ||||||||||| |||||| ||||||||||||||    
T  50052494 tattgccacctaaggatgtctatgtatcattactc 50052528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 29240018 - 29239886
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| |||| |||||||| | || || |||||||||||||||||| |||||| | |||||    
T  29240018 atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtggatgtcaa-atggtgt 29239920  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  29239919 attgccacctaagggtgtctatgtatcattactc 29239886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 50526139 - 50526271
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||| |||||  ||||| ||| ||  ||||| | ||||| ||| ||||||||||||||||||||| |||||||    
T  50526139 atgcactaggaagagagaagaggagaggaaatagaaagcgtgcttgtgcggaatccacgtgaccacgtgtcagatttttgtgtgggtgtcaa-agggtgt 50526237  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||||||||| ||||||||||||||    
T  50526238 attgccacctaaagatgtctatgtatcattactc 50526271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 6034176 - 6034044
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || |||||| ||||||||||||||||||||| |||||||    
T  6034176 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgtcaa-agggtgt 6034078  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  6034077 attgccacctaagggtgtctatgtatcattactc 6034044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 53; E-Value: 5e-21
Query Start/End: Original strand, 364 - 527
Target Start/End: Original strand, 29234182 - 29234345
Alignment:
Q  364 tacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatg 462  Q
    |||||||||| | |||||||||||||| || ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||    
T  29234182 tacatagacactatttattctcatacaccccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtg 29234281  T
Q  463 ttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | |||||||||||  ||| |||| ||||||| |||||| |||| | |||| ||||||||||||||    
T  29234282 tcagatttttgtgaaggtatcaa-agggtgtattgccatctaagggtgtctatgtatcattactc 29234345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 387 - 489
Target Start/End: Original strand, 48647686 - 48647789
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||| ||||||||||||||||||||| |||||| |||||||||| |||||| ||| || |||||| | ||||| |||||||||||| ||||||||| ||    
T  48647686 tacattctatgcactaggaagagagaagaggagaggaaagagaaattgtgcttgtgcggagtccacgtgaccacgtgttagatttttatgtgggtgttaa 48647785  T
Q  486 gagg 489  Q
    ||||    
T  48647786 gagg 48647789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 528
Target Start/End: Complemental strand, 41236479 - 41236346
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| |||||||||||||| |||||| ||| |||    
T  41236479 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaaaagg-tgt 41236381  T
Q  494 tttgccacctaaagatgtccatgtatcattactcg 528  Q
     ||||||||||| | |||| |||||||||||||||    
T  41236380 attgccacctaagggtgtctatgtatcattactcg 41236346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 387 - 536
Target Start/End: Original strand, 42044327 - 42044476
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| |||||||||||||||||| |     
T  42044327 tacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgt-ac 42044425  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactcgttgttaaa 536  Q
     ||| ||| ||||||||||| | |||| |||||||||||||| || |||||    
T  42044426 aaggatgtattgccacctaagggtgtctatgtatcattactcttttttaaa 42044476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 480415 - 480547
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgt-gtgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||   |||||||| | || || ||| ||||||||||||||||||||| |||||||    
T  480415 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 480513  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| | |||| ||||||||||||||    
T  480514 attgtcacctaagggtgtctatgtatcattactc 480547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 28480236 - 28480329
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaaga 487  Q
    ||||||||||||||||||| |||||||||| |||||| |||| | |||| |||||||||| || |||||| ||||||||||||| |||| ||||    
T  28480236 atgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaaga 28480329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 28481111 - 28481204
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaaga 487  Q
    ||||||||||||||||||| |||||||||| |||||| |||| | |||| |||||||||| || |||||| ||||||||||||| |||| ||||    
T  28481111 atgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaaga 28481204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 487
Target Start/End: Original strand, 28481986 - 28482079
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaaga 487  Q
    ||||||||||||||||||| |||||||||| |||||| |||| | |||| |||||||||| || |||||| ||||||||||||| |||| ||||    
T  28481986 atgcactaggaagagagaagaggagatgaaggagaaagtgtgtttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaaga 28482079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 48183017 - 48183149
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| || |||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| |||||||    
T  48183017 atgcattaagaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 48183115  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||| | |||| ||||||||||||||    
T  48183116 attgccacgtaagggtgtctatgtatcattactc 48183149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 54473507 - 54473633
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||||| ||| |||||| ||| ||| ||||| | || || ||||||||||||||||||||||||| | ||||| ||| |    
T  54473507 taggaagagagaagaggagagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaa-atggtgtattgtc 54473605  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||| ||||||||||||||    
T  54473606 acctaagggtgtctatgtatcattactc 54473633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 55475317 - 55475191
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| ||  ||  ||||||| ||  |||||||| ||||||||||||||||||||| ||||||| |||||    
T  55475317 taggaagagagaagagaagaagaaagagaaagtgtacttatgcagggtccatatggccacatgtcagatttttgtgtgggtgtcaa-agggtgtattgcc 55475219  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||  ||||||||| ||||    
T  55475218 acctaaggatgtttatgtatcataactc 55475191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 401 - 482
Target Start/End: Original strand, 18769021 - 18769103
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgt 482  Q
    |||||||||| |||| |||||||||||||||||||| | ||||||| |  |||| ||||||||| ||||||||||||||||||    
T  18769021 taggaagagaaaaaatgagatgaaagagaaaatgtgtttgtgtgggatttacatgaccacatgtcagatttttgtgtgggtgt 18769103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 11511430 - 11511562
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| || |||||||||| || |||  ||||||||| |||||| ||| ||| ||||| | || || ||| |||||||| |||||||||||| |||||||    
T  11511430 atgcattaagaagagagaagagaagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtgggtgtcaa-agggtgt 11511528  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  11511529 attgccacctaagggtgtctatgtatcattactc 11511562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 505
Target Start/End: Original strand, 17983717 - 17983821
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  17983717 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 17983815  T
Q  500 acctaa 505  Q
    ||||||    
T  17983816 acctaa 17983821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 23608367 - 23608235
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||| ||||||||| |||||| |||||| || ||| | || || ||| ||||||||||||||||||||| | |||||    
T  23608367 atgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgtggagttcacgtgactacgtgtcagatttttgtgtgggtgtcaa-atggtgt 23608269  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| || |||| | |||| || |||||||||||    
T  23608268 attgtcatctaagggtgtctatatatcattactc 23608235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 24995075 - 24995207
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| || |||||||||| ||||||  |||||||||||||||| |||  |||||||| | || || ||| | |||||| |||||||||||| |||||||    
T  24995075 atgcattaagaagagagaagaggagagaaaagagaaaatgtgcttgtgcggggtccacgtgactacgtgtcaaatttttatgtgggtgtcaa-agggtgt 24995173  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||| |||| | ||||||| |||||||||||    
T  24995174 attgccatctaagggtgtccatatatcattactc 24995207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 55079687 - 55079814
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg--tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgc 498  Q
    ||||||||||||| || ||| |||||||||| ||| || |||||||  |||| ||  |||||||| |||||||||| |||||||||||| ||||| ||||    
T  55079687 taggaagagagaagagaagaagaaagagaaagtgtacttgtgtgggggtccatatggccacatgtcagatttttgtatgggtgtcaaga-ggtgtattgc 55079785  T
Q  499 cacctaaagatgtccatgtatcattactc 527  Q
    ||||||| | |||  ||||||||| ||||    
T  55079786 cacctaagggtgtttatgtatcataactc 55079814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 19670690 - 19670816
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| ||||||||||||| |||||||| |||||| |||||    
T  19670690 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgagtgtcaag-gggtgtattgcc 19670788  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  19670789 acctaagggtgtttatgtatcataactc 19670816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 44536706 - 44536845
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| |||||| | ||||||||||||| || ||| |||||||||| ||| ||  |||||| || | || ||||||||| |||||||||||||| |||||     
T  44536706 tacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttatgtggggtctatatgaccacatgtcagatttttgtgtggatgtca- 44536804  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||||||||||||  |||  ||||||||| ||||    
T  44536805 -agggtgtattgccacctaaaagtgtttatgtatcataactc 44536845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 401 - 505
Target Start/End: Original strand, 50813866 - 50813970
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| | || || ||||||||| |||||||||||||||||||||| |||||| || ||    
T  50813866 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgaccacatgtcagatttttgtgtgggtgtcaag-gggtgtattacc 50813964  T
Q  500 acctaa 505  Q
    ||||||    
T  50813965 acctaa 50813970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 482
Target Start/End: Complemental strand, 18769237 - 18769153
Alignment:
Q  399 actaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgt 482  Q
    ||||| |||||| ||||||||||||||||||||||||  | |||| ||||  |||| ||||| ||| ||||||||||||||||||    
T  18769237 actagaaagagaaaaaaggagatgaaagagaaaatgtatttgtgtggggtttacatgaccacgtgtcagatttttgtgtgggtgt 18769153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 456 - 527
Target Start/End: Original strand, 29547989 - 29548059
Alignment:
Q  456 ccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    |||||||| |||||||||||||||||||||| || ||| ||||||||||| |||||  ||||||||| ||||    
T  29547989 ccacatgtcagatttttgtgtgggtgtcaag-ggatgtattgccacctaaggatgtttatgtatcataactc 29548059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 418 - 504
Target Start/End: Complemental strand, 29977994 - 29977908
Alignment:
Q  418 agatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccaccta 504  Q
    |||||||||||||| |||||| |||| ||||||| || || || ||| |||||||||||||||||| ||| |||||| ||||||||||    
T  29977994 agatgaaagagaaagtgtgcttgtgtggggtccatatgactacgtgtcagatttttgtgtgggtgttaag-gggtgtattgccaccta 29977908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 29589714 - 29589800
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaag 486  Q
    ||||||||||||| || ||| |||||||||| ||| || ||||||| |||| ||  |||||| | ||||||||||||||||||||||    
T  29589714 taggaagagagaagagaagaagaaagagaaagtgtacttgtgtggggtccatatggccacatatcagatttttgtgtgggtgtcaag 29589800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 465 - 527
Target Start/End: Complemental strand, 40574840 - 40574779
Alignment:
Q  465 agatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    ||||||||||||||||||||| ||||||| || |||||||| |||||| ||||||||| ||||    
T  40574840 agatttttgtgtgggtgtcaa-agggtgtattaccacctaaggatgtctatgtatcataactc 40574779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 401 - 505
Target Start/End: Original strand, 18924469 - 18924573
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| || || || ||| |||||||| |||||||||||||| | ||||| |||||| |||||    
T  18924469 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggagttcatattgccacatgtcagatttttgtgtggatatcaag-gggtgtattgcc 18924567  T
Q  500 acctaa 505  Q
    ||||||    
T  18924568 acctaa 18924573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 47104676 - 47104544
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| || |||||||||| ||||||||||||||||| |||| | |||| ||||| | |  ||||| ||| | ||||||||||||||||| |||| ||||    
T  47104676 atgcattaagaagagagaagaggagatgaaagagaaagtgtgtttgtgtggggtcaataaaaccacgtgtcaaatttttgtgtgggtgtc-agagagtgt 47104578  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| || ||||  ||||| || |||||||||||    
T  47104577 attgtcatctaagaatgtctatatatcattactc 47104544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 47986348 - 47986208
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||| | ||||||||||||| || | | |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||| ||||||    
T  47986348 tacatcccatgtattaggaagagagaagagaataagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtggatgtcaa 47986249  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | || ||| ||||||||||| | |||  ||||||||| ||||    
T  47986248 g-ggatgtattgccacctaagggtgtttatgtatcataactc 47986208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 465 - 527
Target Start/End: Complemental strand, 31910253 - 31910192
Alignment:
Q  465 agatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    ||||||||||||||||||||| || |||| ||| ||||||| |||||| ||||||||| ||||    
T  31910253 agatttttgtgtgggtgtcaa-agagtgtattgtcacctaaggatgtctatgtatcataactc 31910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 456 - 505
Target Start/End: Complemental strand, 32767028 - 32766980
Alignment:
Q  456 ccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaa 505  Q
    |||||||| |||||||||| ||||||||||| |||||| |||||||||||    
T  32767028 ccacatgtcagatttttgtatgggtgtcaag-gggtgtattgccacctaa 32766980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 456 - 528
Target Start/End: Original strand, 8343193 - 8343264
Alignment:
Q  456 ccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactcg 528  Q
    |||||||| |||||||| ||| |||||||| ||| ||| ||||||||||| |||||  ||||||||| |||||    
T  8343193 ccacatgtcagatttttatgtaggtgtcaa-aggatgtattgccacctaaggatgtttatgtatcataactcg 8343264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 352 - 436
Target Start/End: Original strand, 32939587 - 32939671
Alignment:
Q  352 taagaaaagtgttacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtg 436  Q
    |||| ||| |||||||||||||  |||||||  | ||||  | ||| |||| |||||||||| ||||||||||||||||| ||||    
T  32939587 taaggaaaatgttacatagacaccctttatttccgtacacacaatgtactaagaagagagaagaggagatgaaagagaaagtgtg 32939671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 8e-29; HSPs: 29)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 37038611 - 37038479
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||| ||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| |||||||    
T  37038611 atgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 37038513  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||||||||| ||||||||||||||    
T  37038512 attgccacctaaagatgtctatgtatcattactc 37038479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 395 - 526
Target Start/End: Complemental strand, 5957962 - 5957831
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||||||||| |||| | ||| ||| ||||| | || || ||| ||||||||||||||||||||| |||||||    
T  5957962 atgcactaggaagagagaagaggagaggaaagagaaagtgtgattgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 5957864  T
Q  494 tttgccacctaaagatgtccatgtatcattact 526  Q
     |||||||||||  ||||| |||||||||||||    
T  5957863 attgccacctaagaatgtctatgtatcattact 5957831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 43414555 - 43414681
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||  | ||||| ||||||||||||||||||||||||| ||||||| |||||    
T  43414555 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccatgtgaccacgtgttagatttttgtgtgggtgtcaa-agggtgtgttgcc 43414653  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    | |||| |||||| ||||||||| ||||    
T  43414654 atctaaggatgtctatgtatcataactc 43414681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 395 - 528
Target Start/End: Original strand, 1179908 - 1180041
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||  ||||||| || || ||| ||||||||||||||||||||| |||||||    
T  1179908 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggaatccacatgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 1180006  T
Q  494 tttgccacctaaagatgtccatgtatcattactcg 528  Q
     || |||||||| | |||| |||||||||||||||    
T  1180007 attaccacctaagggtgtctatgtatcattactcg 1180041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 12831179 - 12831047
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| |||||||    
T  12831179 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 12831081  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| | |||| ||||||||||||||    
T  12831080 attgtcacctaagggtgtctatgtatcattactc 12831047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 395 - 505
Target Start/End: Original strand, 8841400 - 8841510
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    |||||||||||| |||||| |||||| |||||||||| |||||| |||  |||||||| | || || ||||||||||||||||||||||||| |||||||    
T  8841400 atgcactaggaaaagagaagaggagaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaa-agggtgt 8841498  T
Q  494 tttgccacctaa 505  Q
      ||||||||||    
T  8841499 actgccacctaa 8841510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 40423917 - 40424043
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||||| || || ||| |||||||||||||| |||||| ||||||| |||||    
T  40423917 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtggatgtcaa-agggtgtattgcc 40424015  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | | || ||||||||||||||    
T  40424016 acctaagggtatctatgtatcattactc 40424043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 14548054 - 14547922
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| | |||||    
T  14548054 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-atggtgt 14547956  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||| ||||||    
T  14547955 attgccacctaagggtgtctatgtatctttactc 14547922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 34012264 - 34012396
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| | ||||||||||||||||||| |||||||    
T  34012264 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaa-agggtgt 34012362  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     || |||||||| | |||| ||||||||||||||    
T  34012363 attaccacctaagggtgtctatgtatcattactc 34012396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 16383503 - 16383377
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  16383503 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 16383405  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  16383404 acctaagggtgtttatgtatcataactc 16383377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 361 - 522
Target Start/End: Original strand, 10621021 - 10621182
Alignment:
Q  361 tgttacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccac 459  Q
    |||||||||||||   ||||||| ||||||||| ||  | ||||||||||||| ||||||  ||||||||| |||||| ||| ||| || |  |  | ||    
T  10621021 tgttacatagacatcttttattcccatacatcccatatattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatcgatgtggctac 10621120  T
Q  460 atgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcat 522  Q
     ||| ||||||||||||||||||||| ||||||| || |||||||| |||||| |||||||||    
T  10621121 gtgtcagatttttgtgtgggtgtcaa-agggtgtattaccacctaaggatgtctatgtatcat 10621182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 504089 - 504221
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||  ||||||||  |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| ||| |||    
T  504089 atgcattaggaagagagaagatgagagaaaagagaatgtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagg-tgt 504187  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  504188 attgccacctaagggtgtctatgtatcattactc 504221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 403 - 527
Target Start/End: Complemental strand, 15197457 - 15197333
Alignment:
Q  403 ggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccac 501  Q
    |||||||| || ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| ||||||| |||||||    
T  15197457 ggaagagaaaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgtattgccac 15197359  T
Q  502 ctaaagatgtccatgtatcattactc 527  Q
    ||||   |||| ||||||||||||||    
T  15197358 ctaagagtgtctatgtatcattactc 15197333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 483
Target Start/End: Original strand, 15258889 - 15258986
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtc 483  Q
    ||||||||||   |||||||||||||| |||||| ||||||||||||||||| |||  |||||||| | ||||||||| |||||||| ||||| ||||    
T  15258889 tacatcctatattctaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagatttttatgtggatgtc 15258986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 17443957 - 17443825
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||| ||||||||||| || |||||||||||||| |||  | |||| |||||||||| || |||||| ||||||||||||| |||| ||||  ||||    
T  17443957 atgcactgggaagagagaagagaagatgaaagagaaagtgtctttgtgtggggtccacatgactacatgtcagatttttgtgtgagtgttaaga-agtgt 17443859  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| | |||| ||||||||| ||||    
T  17443858 attgtcacctaaggttgtctatgtatcataactc 17443825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 23122565 - 23122697
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| ||||||  ||  |||||||| | || || ||| ||||||||||||||||||||| | |||||    
T  23122565 atgcattaggaagagagaacaggagagaaaagagaaagtgtgcttatgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aaggtgt 23122663  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||| | |||| ||||||||||||||    
T  23122664 attgccacttaagggtgtctatgtatcattactc 23122697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 34307342 - 34307216
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| | || ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  34307342 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggttcatatgtccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 34307244  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  34307243 acctaagggtgtttatgtatcataactc 34307216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 361 - 527
Target Start/End: Original strand, 20074876 - 20075034
Alignment:
Q  361 tgttacatagacagtctttattctcatacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccac 459  Q
    |||||||||||||   |||||||||||||| |  ||| ||||||||||||||| || ||| |||||||||| |||||| |||  ||||        ||||    
T  20074876 tgttacatagacacattttattctcatacacctcatgaactaggaagagagaagagaagaggaaagagaaagtgtgcttgtgcagggt--------ccac 20074967  T
Q  460 atgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| | |||||| |||||||||||| || |||| ||||||||||| |||||| ||||||||||||||    
T  20074968 gtgtcacatttttatgtgggtgtcaa-agagtgtattgccacctaaggatgtctatgtatcattactc 20075034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 4854823 - 4854963
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| || || ||| ||||||||| ||||||  ||||||||| |||||| |||  |||||||  |  |||||| | |||||||| ||| ||||| ||    
T  4854823 tacatcccatacattagtaagagagaagaggagagaaaagagaaagtgtgcttgtgcagggtccatgtggccacatatcagatttttatgtaggtgttaa 4854922  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||||||||||| |||||| ||||||||||||||    
T  4854923 -agggtgtattgccacctaaggatgtctatgtatcattactc 4854963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 9122317 - 9122229
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgt 482  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || |||||| ||||||||||||||||||    
T  9122317 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacatgtcagatttttgtgtgggtgt 9122229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 16056375 - 16056501
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| || ||| ||| |    
T  16056375 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-ggatgtattgtc 16056473  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    || ||| |||||  ||||||||| ||||    
T  16056474 acataaggatgtttatgtatcataactc 16056501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 24307767 - 24307893
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||| | |||||||||||||||||||||| || ||| |||||    
T  24307767 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatatcagatttttgtgtgggtgtcaag-ggatgtattgcc 24307865  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  24307866 acctaagggtgtttatgtatcataactc 24307893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 30479448 - 30479574
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| | |||||| ||  |||||||| |||||||| ||||| |||||| ||||||| |||||    
T  30479448 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcgaggtccatatagccacatgtcagatttttatgtggatgtcaa-agggtgtattgcc 30479546  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  30479547 acctaagggtgtttatgtatcataactc 30479574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 15048141 - 15048281
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaa-gagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtca 484  Q
    ||||||| || || ||||||||||||| ||||||| ||| |||||| |||||| ||| ||| ||||  |  | || ||| |||||||||||||| |||||    
T  15048141 tacatcccatacattaggaagagagaagaggagataaaaagagaaagtgtgcttgtgcggggtccatgtggctacgtgtcagatttttgtgtgg-tgtca 15048239  T
Q  485 agagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | ||||||| ||||||||||| |||||| ||||||||| ||||    
T  15048240 a-agggtgtattgccacctaaggatgtctatgtatcataactc 15048281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 10284599 - 10284731
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| | || | |||||||||| |||||| |||  |||||||| | || || ||| | ||||||||||||||||||| || ||||    
T  10284599 atgcactaggaagagagaagatgaaaggaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcaaatttttgtgtgggtgtcaa-agagtgt 10284697  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||| ||| | |||| ||||||||| ||||    
T  10284698 attgtcacttaagggtgtctatgtatcataactc 10284731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 403 - 527
Target Start/End: Complemental strand, 42221639 - 42221515
Alignment:
Q  403 ggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccac 501  Q
    ||||||||||| | ||||||||||||||| |||||| || | ||||||| || |  || ||| ||||||||||||||||||| || |  ||| ||| |||    
T  42221639 ggaagagagaagatgagatgaaagagaaagtgtgcttgtatggggtccatatgattacgtgtcagatttttgtgtgggtgtccag-gaatgtattgtcac 42221541  T
Q  502 ctaaagatgtccatgtatcattactc 527  Q
    |||| |||||  ||||||||||||||    
T  42221540 ctaaggatgtatatgtatcattactc 42221515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 395 - 438
Target Start/End: Original strand, 42354556 - 42354599
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgct 438  Q
    ||||||||||||||||||| || |||||||||||||| ||||||    
T  42354556 atgcactaggaagagagaagagaagatgaaagagaaagtgtgct 42354599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 44507055 - 44507187
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||  ||||||||| | |||| ||  ||| ||||| | || || ||| |||||||||||||||||| || || ||||    
T  44507055 atgcattaggaagagagaagatgagagaaaagagaaagtatgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgttaa-agagtgt 44507153  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     || |||||||| | |||| ||||||||||||||    
T  44507154 attaccacctaagggtgtctatgtatcattactc 44507187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 444 - 528
Target Start/End: Original strand, 14055610 - 14055693
Alignment:
Q  444 gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactcg 528  Q
    |||||||| | || |||||| |||||||||||||| ||||||| | |||| ||| ||||||| | |||| ||||||||| |||||    
T  14055610 gggtccacgtgactacatgtaagatttttgtgtggatgtcaag-gagtgtattgtcacctaagggtgtcaatgtatcataactcg 14055693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 8e-29; HSPs: 17)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 31952998 - 31953130
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| || |||||||||||||| |||| | ||||| ||||||||| | ||||||| |||||||| ||||||||||||| ||||||    
T  31952998 atgcactaggaagagagaagagaagatgaaagagaaagtgtgtttgtgtgaggtccacatgaacacatgtcagatttttatgtgggtgtcaag-gggtgt 31953096  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| |||||| || |||||||||||    
T  31953097 attgccacctaaggatgtctatctatcattactc 31953130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 32869810 - 32869678
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| |||||||    
T  32869810 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 32869712  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||| ||||||    
T  32869711 attgccacctaagggtgtctatgtatctttactc 32869678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 394 - 485
Target Start/End: Complemental strand, 12732615 - 12732523
Alignment:
Q  394 tatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| ||||| ||||||||| ||||||||||||||||||||||||  |||||| |||||||  |||| ||| |||||||||||||||||||||    
T  12732615 tatgtactagaaagagagaagaggagatgaaagagaaaatgtgcttatgtgggatccacatagccacgtgtcagatttttgtgtgggtgtcaa 12732523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 17598686 - 17598554
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| | | |||    
T  17598686 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgacaacgtgtcagatttttgtgtgggtgtcaa-aagatgt 17598588  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  17598587 attgccacctaagggtgtctatgtatcattactc 17598554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 524
Target Start/End: Original strand, 22880632 - 22880755
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||| ||||||||||||||||| ||||||| |||||    
T  22880632 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagaattttgtgtgggtgtcaa-agggtgtattgcc 22880730  T
Q  500 acctaaagatgtccatgtatcatta 524  Q
    |||||| | |||| |||||||||||    
T  22880731 acctaagggtgtctatgtatcatta 22880755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 532
Target Start/End: Original strand, 30341334 - 30341465
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  30341334 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 30341432  T
Q  500 acctaaagatgtccatgtatcattactcgttgt 532  Q
    |||||| | |||  ||||||||| |||| ||||    
T  30341433 acctaagggtgtttatgtatcataactctttgt 30341465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 15507998 - 15508124
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  15507998 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 15508096  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  15508097 acctaagggtgtttatgtatcataactc 15508124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 15990016 - 15990142
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  15990016 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 15990114  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  15990115 acctaagggtgtttatgtatcataactc 15990142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 523
Target Start/End: Original strand, 28536456 - 28536582
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||| ||| || |||| ||||||||| |||||| ||||||| ||||||| |||   ||| |||||||||||||||||||||| || |||    
T  28536456 atgcagtaggaagagggaagagaagataaaagagaaagtgtgcttgtgtggggtccacatgaccg--tgtcagatttttgtgtgggtgtcaag-ggttgt 28536552  T
Q  494 tttgccacctaaagatgtccatgtatcatt 523  Q
     ||||||||||| |||||  ||||||||||    
T  28536553 attgccacctaaggatgtttatgtatcatt 28536582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 6209425 - 6209565
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||  ||||||||||||| |||||||    
T  6209425 tacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgctagtgcggggtccacgtgactacgtgacagatttttgtgtgagtgtcaa 6209524  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     |  |||| ||||||||||| | |||| ||||||||||||||    
T  6209525 -atagtgtattgccacctaagggtgtctatgtatcattactc 6209565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 11427750 - 11427616
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| ||| |||    
T  11427750 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aggatgt 11427652  T
Q  494 tttgccaccta--aagatgtccatgtatcattactc 527  Q
     ||||||||||  | | |||| ||||||||||||||    
T  11427651 attgccacctaagagggtgtctatgtatcattactc 11427616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 387 - 485
Target Start/End: Original strand, 23128087 - 23128186
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| |||||||||| || ||||||  ||||||||| |||||| ||||||| ||||| | || || ||| |||||||||||||||||||||    
T  23128087 tacatcccatgcattaggaagagaaaagaggagagaaaagagaaagtgtgcttgtgtgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa 23128186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 31976374 - 31976248
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||||||||| |||||| |||  |||| ||  | ||||| ||| |||||||||||||||||| || ||||| | |||||    
T  31976374 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggttcatgtgaccacgtgtcagatttttgtgtgggtgttaa-agggtatattgcc 31976276  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||| ||||||||| ||||    
T  31976275 acctaaggatgtctatgtatcataactc 31976248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 394 - 522
Target Start/End: Original strand, 9379679 - 9379807
Alignment:
Q  394 tatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtg 492  Q
    |||||| |||||||||| || || ||||||||||||||||||| | ||||| | |||||||  |||| ||| | |||||||| ||||||||||| || ||    
T  9379679 tatgcattaggaagagaaaagagaagatgaaagagaaaatgtgtttgtgtgagatccacatggccacgtgtcaaatttttgtatgggtgtcaag-ggatg 9379777  T
Q  493 ttttgccacctaaagatgtccatgtatcat 522  Q
    | ||| || |||| |||||| |||||||||    
T  9379778 tattgtcatctaaggatgtctatgtatcat 9379807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 29857959 - 29857827
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| || |||  ||||||||| ||||||  || ||| ||||| | || || ||| |||||||||||||||||| || ||| |||    
T  29857959 atgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaagg-tgt 29857861  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||| |||||| |||| ||||||||||||||    
T  29857860 attgccatctaaaggtgtctatgtatcattactc 29857827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 399 - 482
Target Start/End: Complemental strand, 30870142 - 30870058
Alignment:
Q  399 actaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgt 482  Q
    ||||| ||||||||| |||||| ||||||||||||||||| |||  |||||||  | |||||||||||||||||| | |||||||    
T  30870142 actagaaagagagaagaggagaggaaagagaaaatgtgcttgtgcggggtccatgtgaccacatgttagatttttatatgggtgt 30870058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 401 - 511
Target Start/End: Complemental strand, 4231674 - 4231564
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||| ||| ||||||||||||||||| |||| |||||| |||||    
T  4231674 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacgtgtcagatttttgtgtgggtggcaag-gggtgtattgcc 4231576  T
Q  500 acctaaagatgt 511  Q
    |||||| |||||    
T  4231575 acctaatgatgt 4231564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 66; Significance: 8e-29; HSPs: 26)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 66; E-Value: 8e-29
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 51898651 - 51898783
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||| ||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| |||||||    
T  51898651 atgcactaggaagagagaagaggagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 51898749  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||||||||| ||||||||||||||    
T  51898750 attgccacctaaagatgtctatgtatcattactc 51898783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 9474836 - 9474976
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| ||||||  ||||||||| |||| | |||  |||||||| | || || ||| |||||||||||||||||||||    
T  9474836 tacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 9474935  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||||||||||| | |||| ||||||||||||||    
T  9474936 -agggtgtattgccacctaagggtgtctatgtatcattactc 9474976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 47452288 - 47452420
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||||||||||||||||||||||||| |||||||    
T  47452288 atgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgttagatttttgtgtgggtgtcaa-agggtgt 47452386  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     || |||||||| | |||| ||||||||||||||    
T  47452387 attaccacctaagggtgtctatgtatcattactc 47452420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 27564703 - 27564835
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | |  || ||| ||||||||||||||||||||| ||| |||    
T  27564703 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaagg-tgt 27564801  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| |||||| ||||||||||||||    
T  27564802 attgccacctaaggatgtctatgtatcattactc 27564835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 37649330 - 37649198
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  |||| |||| |||||| ||| ||  | ||| | ||||| ||| ||||||||||||||||||||| || ||||    
T  37649330 atgcattaggaagagagaagaggagagaaaagggaaagtgtgcttgtgcggaattcacgtgaccacgtgtcagatttttgtgtgggtgtcaa-agagtgt 37649232  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||||||||| ||||||||||||||    
T  37649231 attgccacctaaagatgtctatgtatcattactc 37649198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 395 - 522
Target Start/End: Complemental strand, 44454111 - 44453984
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | |||| |||||| ||| |||||| ||||||| ||||| | ||||||||| |||||||||||||||| |||||| | |||    
T  44454111 atgcattaggaagagagaagatgagaggaaagaaaaagtgtgcttgtgtgggatccacgtaaccacatgtcagatttttgtgtgggtatcaaga-gatgt 44454013  T
Q  494 tttgccacctaaagatgtccatgtatcat 522  Q
     ||||||| ||||| |||| |||||||||    
T  44454012 attgccacttaaaggtgtctatgtatcat 44453984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 2582041 - 2581915
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||| ||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| ||||||| |||||    
T  2582041 taggaagagagaagaggagagaaaaaagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgtattgcc 2581943  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||| ||||||||||||||    
T  2581942 acctaagggtgtctatgtatcattactc 2581915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 32813373 - 32813247
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||  | ||||| ||| |||||||||||||||||| || ||||||| |||||    
T  32813373 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgttaa-agggtgtattgcc 32813275  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||| ||||||||| ||||    
T  32813274 acctaaggatgtctatgtatcataactc 32813247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 395 - 524
Target Start/End: Original strand, 44548344 - 44548473
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||  ||||||||| |||||| ||| ||| ||||| | || || ||| |||||||||||||||| |||| | |||||    
T  44548344 atgcattaggaagagagaagaagagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtatcaa-atggtgt 44548442  T
Q  494 tttgccacctaaagatgtccatgtatcatta 524  Q
     |||||||||||||||||| |||||||||||    
T  44548443 attgccacctaaagatgtctatgtatcatta 44548473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 5958974 - 5959100
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| || ||||||||| ||||||||||||||||||||||| ||||| |||||    
T  5958974 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgaccacatgtcagatttttgtgtgggtgtcaaga-ggtgtattgcc 5959072  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    || ||| | |||  ||||||||| ||||    
T  5959073 acttaagggtgtttatgtatcataactc 5959100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 38595280 - 38595154
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| | ||||  ||||||||| |||||| ||  ||| ||||| | || || ||| ||||||||||||||||||||| ||||||| |||||    
T  38595280 taggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgtattgcc 38595182  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||||| |||  ||||||||||||||    
T  38595181 acctaaaggtgtttatgtatcattactc 38595154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 50590974 - 50591100
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  50590974 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 50591072  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  50591073 acctaagggtgtttatgtatcataactc 50591100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 8346355 - 8346488
Alignment:
Q  395 atgcactaggaagagagaaa-aggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtg 492  Q
    ||||| |||||||||| ||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| | ||||    
T  8346355 atgcattaggaagagaaaaagaggagagaaaagagaaagtgtgcttgtgcagggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-atggtg 8346453  T
Q  493 ttttgccacctaaagatgtccatgtatcattactc 527  Q
    | ||||||||||||| || | ||||||||||||||    
T  8346454 tattgccacctaaaggtgactatgtatcattactc 8346488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 41608453 - 41608593
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| |||||| | ||||||||||||| || ||| |||||||||| ||| || ||  ||| |||| ||  |||||||| ||||||||||||| |||||||    
T  41608453 tacaccctatgtattaggaagagagaagagaagaagaaagagaaagtgtacttgtacggggtccatatggccacatgtcagatttttgtgtgagtgtcaa 41608552  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | |||||| ||||||||||| |||||  ||||||||| ||||    
T  41608553 g-gggtgtattgccacctaaggatgtttatgtatcataactc 41608593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 50630598 - 50630458
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| |||||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||  |||    
T  50630598 tacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtaacaa 50630499  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||| ||||||||||| | | || ||||||||||||||    
T  50630498 -aggatgtattgccacctaagggtatctatgtatcattactc 50630458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 401 - 528
Target Start/End: Complemental strand, 3000445 - 3000318
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| | ||||  ||||||||| |||||| ||  ||| ||||| | || || ||| ||||||||||||||||||||| ||||||| |||||    
T  3000445 taggaagagagaagatgagagaaaagagaaagtgtgcttgtacggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgtattgcc 3000347  T
Q  500 acctaaagatgtccatgtatcattactcg 528  Q
    |||||| | |||  |||||||||||||||    
T  3000346 acctaagggtgtttatgtatcattactcg 3000318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 13414893 - 13414802
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||| ||||||||||||| | || |  |||||||||||||||| ||||||| ||||| | || || |||||||||||||||||||||||||    
T  13414893 atgcattaggaagagagaagatgatagaaaagagaaaatgtgcttgtgtggggtccacgtgactacgtgttagatttttgtgtgggtgtcaa 13414802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 399 - 527
Target Start/End: Complemental strand, 6260998 - 6260870
Alignment:
Q  399 actaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttg 497  Q
    ||||| ||||||||| |||||| |||| ||||||||||||  || ||| ||||| | |||||||||||||||||| |||||||||  || |||||| ||     
T  6260998 actagaaagagagaagaggagaagaaatagaaaatgtgcttatgcggggtccacgtgaccacatgttagatttttatgtgggtgttcag-gggtgtatta 6260900  T
Q  498 ccacctaaagatgtccatgtatcattactc 527  Q
    |||||||| ||| || || |||||| ||||    
T  6260899 ccacctaaggatatctatctatcataactc 6260870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 38632289 - 38632421
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||| ||| |||||| ||| ||| ||||| | || || ||| |||||||||||||| ||| || ||| |||    
T  38632289 atgcattaggaagagagaagaggagagaaaagaaaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaaaagg-tgt 38632387  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  38632388 attgccacctaagggtgtctatgtatcattactc 38632421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 48716250 - 48716382
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| |||| |  ||||| ||| |||||| ||| ||| ||||| | || || ||| |||||||||||||| |||||| | |||||    
T  48716250 atgcattaggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgtcaa-atggtgt 48716348  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  48716349 attgccacctaagggtgtctatgtatcattactc 48716382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 386 - 483
Target Start/End: Complemental strand, 48489441 - 48489343
Alignment:
Q  386 atacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtc 483  Q
    ||||| |||||  ||||||||||||||| ||| ||  ||| |||||||||||| ||| ||| ||||| | ||||||||| |||||||||||||| ||||    
T  48489441 atacaccctatatactaggaagagagaagaggtgagaaaatagaaaatgtgcttgtgcgggatccacgtgaccacatgtcagatttttgtgtggatgtc 48489343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 41758937 - 41758805
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||| | |||  |||||||  | || || ||| |||||||||||||| |||||| |||||||    
T  41758937 atgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgactacgtgtcagatttttgtgtggttgtcaa-agggtgt 41758839  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||  ||| | |||| ||||||||||||||    
T  41758838 attgccatttaatggtgtctatgtatcattactc 41758805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 526
Target Start/End: Original strand, 11152346 - 11152476
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||| ||||||||||| |||||| |||| |||||  ||||| |||  ||||| |||| || || ||| |||||||||||||| |||| | |||||||    
T  11152346 atgcactgggaagagagaagaggagaggaaaaagaaagcgtgcttgtgcggggtctacatgactacgtgtcagatttttgtgtggatgtcga-agggtgt 11152444  T
Q  494 tttgccacctaaagatgtccatgtatcattact 526  Q
     ||||||||| ||| |||| |||| ||||||||    
T  11152445 attgccacct-aaggtgtctatgtttcattact 11152476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 456 - 527
Target Start/End: Original strand, 23597121 - 23597191
Alignment:
Q  456 ccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    |||| ||| |||||||| ||||||| |||| || |||| ||||||||||| |||||| ||||||||||||||    
T  23597121 ccacgtgtcagatttttatgtgggtatcaa-agagtgtattgccacctaatgatgtctatgtatcattactc 23597191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 43264 - 43132
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||| ||||||||  ||||||  ||||||||| |||||| ||| || |||||| | || || ||| ||||||||||||||||||||| ||| |||    
T  43264 atgcattagaaagagagaggaggagagaaaagagaaagtgtgcttgtgcggagtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aggatgt 43166  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| | |||||   |||| ||||||||||||||    
T  43165 attgtctcctaagactgtctatgtatcattactc 43132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 29; E-Value: 0.000001
Query Start/End: Original strand, 354 - 394
Target Start/End: Original strand, 23597008 - 23597048
Alignment:
Q  354 agaaaagtgttacatagacagtctttattctcatacatcct 394  Q
    |||||| ||||||||||||| | ||||||||||||||||||    
T  23597008 agaaaaatgttacatagacattttttattctcatacatcct 23597048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 58; Significance: 5e-24; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 2740414 - 2740274
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| |||||||||||||  |||||  ||||||||| |||||| ||| ||| ||||| | || || ||| |||||||||||||||||||||    
T  2740414 tacatcccatgcattaggaagagagaaggggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa 2740315  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||||||||||| |||||| ||||||||||||||    
T  2740314 -agggtgtattgccacctaaggatgtctatgtatcattactc 2740274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 395 - 524
Target Start/End: Original strand, 18520852 - 18520981
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||| ||||||||| |||||| |||  |||||||| | || || ||| ||||||||||||||||||||| |||||||    
T  18520852 atgcattaggaagagagaagaggagataaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agggtgt 18520950  T
Q  494 tttgccacctaaagatgtccatgtatcatta 524  Q
     ||||||||||| | |||| |||||||||||    
T  18520951 attgccacctaagggtgtctatgtatcatta 18520981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 6679838 - 6679698
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| ||||| || ||||||||||||| ||||||  |||||||||||||| | ||| ||| ||||  | ||||| ||| |||||||||||||||||||||    
T  6679838 tacaccctatacattaggaagagagaagaggagagaaaagagaaaatgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaa 6679739  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||| |||||||||||||||||| ||||||||| ||||    
T  6679738 aagg-tgtattgccacctaaagatgtctatgtatcataactc 6679698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 35943860 - 35943992
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    |||||||||||||||| || |||||| |||||||||| |||||| ||||||| ||||| | || || ||| ||||||||||||||||||||| | | |||    
T  35943860 atgcactaggaagagaaaagaggagaggaaagagaaagtgtgcttgtgtgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaa-atgatgt 35943958  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||| ||||    
T  35943959 attgccacctaagggtgtctatgtatcataactc 35943992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 2252142 - 2252268
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  2252142 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 2252240  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||  ||||||||| ||||    
T  2252241 acctaaggatgtttatgtatcataactc 2252268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 33149606 - 33149738
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| | ||||||||||||||||||| |||||||    
T  33149606 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcaaatttttgtgtgggtgtcaa-agggtgt 33149704  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     || |||||||| | |||| ||||||||||||||    
T  33149705 attaccacctaagggtgtctatgtatcattactc 33149738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 33825292 - 33825424
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| || |||| ||||||||| |||||| ||||  ||| ||||| | ||| ||| |||||||| ||||||||||||| | ||||    
T  33825292 atgcactaggaagagagaagagaagataaaagagaaagtgtgcttgtgtaaggttcacatgaacacgtgtcagatttttatgtgggtgtcaag-gagtgt 33825390  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||  ||||| ||| ||||||||||    
T  33825391 attgccacctaagaatgtctatgcatcattactc 33825424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 36732910 - 36733042
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || |  ||| ||||||||||||||||||||| |||||||    
T  36732910 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactatgtgtcagatttttgtgtgggtgtcaa-agggtgt 36733008  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||| |||||| | |||| ||||||||||||||    
T  36733009 attgctacctaagggtgtctatgtatcattactc 36733042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 401 - 532
Target Start/End: Original strand, 3921239 - 3921370
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  3921239 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 3921337  T
Q  500 acctaaagatgtccatgtatcattactcgttgt 532  Q
    |||||| | |||  ||||||||| |||| ||||    
T  3921338 acctaagggtgtttatgtatcataactctttgt 3921370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 396 - 527
Target Start/End: Complemental strand, 40145538 - 40145407
Alignment:
Q  396 tgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgtt 494  Q
    |||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| |||||||||||||| ||| || |||||||     
T  40145538 tgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtggatgttaa-agggtgta 40145440  T
Q  495 ttgccacctaaagatgtccatgtatcattactc 527  Q
    ||||||||||| | |||| ||||||||||||||    
T  40145439 ttgccacctaagggtgtctatgtatcattactc 40145407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 446
Target Start/End: Complemental strand, 2177504 - 2177445
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg 446  Q
    ||||||| ||||||||||||||||||| |||||| ||||||||||||||||| |||||||    
T  2177504 tacatccaatgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgtggg 2177445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 28177901 - 28177775
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||| ||| ||||||  ||||||||| |||| | ||| ||| ||||  | ||||| ||| ||||||||||||||||||||| ||||||| |||||    
T  28177901 taggaagagggaagaggagagaaaagagaaagtgtgtttgtgcggggtccatgtgaccacgtgtcagatttttgtgtgggtgtcaa-agggtgtattgcc 28177803  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||| ||||||||| ||||    
T  28177802 acctaaggatgtctatgtatcataactc 28177775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 42414276 - 42414402
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| |||| |  ||||| ||| |||||| ||| ||| ||||||| || || ||| ||||||||||||||||||||| ||||||| |||||    
T  42414276 taggaagagagaagaggaaagaaaagataaagtgtgcttgtgcggggtccacatgactacgtgtcagatttttgtgtgggtgtcaa-agggtgtattgcc 42414374  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||  | |||| ||||||||||||||    
T  42414375 acctactggtgtctatgtatcattactc 42414402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 13811792 - 13811652
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| ||||||   |||||||| |||||| |||  |||||||| | || || ||| |||||||||||||||||||||    
T  13811792 tacatcccatgcattaggaagagagaagaggagagagaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 13811693  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     | | ||| ||||||||||| | |||| ||||||| ||||||    
T  13811692 -atgatgtattgccacctaagggtgtctatgtatctttactc 13811652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 14831946 - 14831814
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||| ||||| |||||| ||| ||| ||||| | || || ||| |||||||| |||||||||||| |||||||    
T  14831946 atgcattaggaagagagaagaggagaaaaaaaagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttatgtgggtgtcaa-agggtgt 14831848  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||   |||| ||||||||||||||    
T  14831847 attgccacctaagagtgtctatgtatcattactc 14831814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 35785331 - 35785199
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||  ||||||||| |||| | ||| ||| ||||| | || || ||| ||||||||||||||||||||| ||| |||    
T  35785331 atgcattaggaagagagaagatgagagaaaagagaaagtgtgattgtgcgggatccacgtaactacgtgtcagatttttgtgtgggtgtcaaaagg-tgt 35785233  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  35785232 attgccacctaagggtgtctatgtatcattactc 35785199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 467 - 526
Target Start/End: Original strand, 36875644 - 36875702
Alignment:
Q  467 atttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattact 526  Q
    ||||||||||||||||||| ||||||| ||||||||||| | |||| |||||||||||||    
T  36875644 atttttgtgtgggtgtcaa-agggtgtattgccacctaagggtgtctatgtatcattact 36875702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 406 - 527
Target Start/End: Original strand, 6259980 - 6260101
Alignment:
Q  406 agagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccaccta 504  Q
    |||||||| ||||||||||||||||| ||||||  |||| ||||||  | ||||  ||||||||||||| |||||||| || ||||||| ||| ||||||    
T  6259980 agagagaagaggagatgaaagagaaagtgtgcttctgtgaggtccatgtgaccatgtgttagatttttgcgtgggtgttaa-agggtgtattgtcaccta 6260078  T
Q  505 aagatgtccatgtatcattactc 527  Q
      | |||  ||||||||||||||    
T  6260079 tggttgtgtatgtatcattactc 6260101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 465 - 522
Target Start/End: Complemental strand, 10356696 - 10356639
Alignment:
Q  465 agatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcat 522  Q
    |||||||||||||||||||||  || ||| ||||||||||| |||||| |||||||||    
T  10356696 agatttttgtgtgggtgtcaatgggatgtattgccacctaaggatgtctatgtatcat 10356639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 399 - 482
Target Start/End: Complemental strand, 21370132 - 21370048
Alignment:
Q  399 actaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgt 482  Q
    |||||||||| |||| | |||| ||||||||||||||| | |||  |||||||| | ||||||||| ||||||||| ||||||||    
T  21370132 actaggaagaaagaagatgagaggaaagagaaaatgtgtttgtgcggggtccacgtgaccacatgtcagatttttgagtgggtgt 21370048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 395 - 482
Target Start/End: Complemental strand, 31009120 - 31009032
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgt 482  Q
    ||||||||||||||||||| || ||| |||| ||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||    
T  31009120 atgcactaggaagagagaagagaagaggaaatagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgt 31009032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 415 - 477
Target Start/End: Complemental strand, 25831397 - 25831334
Alignment:
Q  415 aggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtg 477  Q
    |||| ||||||||||||||||| | ||||||| ||||||| ||||| |||||||||||| ||||    
T  25831397 aggatatgaaagagaaaatgtgtttgtgtggggtccacatgaccacgtgttagatttttttgtg 25831334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 26720642 - 26720516
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || |||  ||||||||| |||||| ||| ||| ||||  |  |||| ||| |||||||| ||| ||||| || ||||||| |||||    
T  26720642 taggaagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaa-agggtgtattgcc 26720544  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||| ||||||||| ||||    
T  26720543 acctaaggatgtctatgtatcataactc 26720516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 26990391 - 26990265
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || |||  ||||||||| |||||| ||| ||| ||||  |  |||| ||| |||||||| ||| ||||| || ||||||| |||||    
T  26990391 taggaagagagaagagaagagaaaagagaaagtgtgcttgtgcgggatccatgtggccacgtgtcagatttttttgtaggtgttaa-agggtgtattgcc 26990293  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||| ||||||||| ||||    
T  26990292 acctaaggatgtctatgtatcataactc 26990265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 56; Significance: 8e-23; HSPs: 32)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 393 - 527
Target Start/End: Complemental strand, 18207313 - 18207180
Alignment:
Q  393 ctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggt 491  Q
    |||| |||||||||||||||| ||||||||||||||||| |||||| ||||||| | ||| |  |||| |||||||||||||| |||||||||||| |||    
T  18207313 ctatccactaggaagagagaagaggagatgaaagagaaagtgtgcttgtgtggggttcacgtg-ccacgtgttagatttttgtatgggtgtcaaga-ggt 18207216  T
Q  492 gttttgccacctaaagatgtccatgtatcattactc 527  Q
    || ||||||||||| | |||| ||||||||| ||||    
T  18207215 gtattgccacctaaggttgtctatgtatcataactc 18207180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 35137673 - 35137533
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| ||||||  ||||||||| |||| | ||| ||| ||||| | || || |||||||||||||||||||||||||    
T  35137673 tacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgtttgtgcggggtccacgtgactacgtgttagatttttgtgtgggtgtcaa 35137574  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||||||||||| | |||| || |||||||||||    
T  35137573 -agggtgtattgccacctaagggtgtctatttatcattactc 35137533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 395 - 485
Target Start/End: Complemental strand, 36208305 - 36208214
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||||||||||||||| |||||| ||||||||||||||||| |||  |||||||| | ||||||||| || ||||||||||||||||||    
T  36208305 atgcactaggaagagagaagaggagaggaaagagaaaatgtgcttgtgcagggtccacgtgaccacatgtcagctttttgtgtgggtgtcaa 36208214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 19329974 - 19329842
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | |  || ||| ||||||||||||||||||||| ||| |||    
T  19329974 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgattacgtgtcagatttttgtgtgggtgtcaaaagg-tgt 19329876  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| |||||| ||||||||||||||    
T  19329875 attgccacctaaggatgtctatgtatcattactc 19329842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 38267180 - 38267040
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| |||||||||||||||||||||    
T  38267180 tacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa 38267081  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||| ||| ||| | |||| ||||||||||||||    
T  38267080 -agggtgtattgtcacataagggtgtctatgtatcattactc 38267040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 41423814 - 41423682
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| ||||||||||||||||||| |||| ||  ||| || || | ||||||||| ||||||||||||  ||||||||| |||||    
T  41423814 atgcactaggaagagagaagaggagatgaaagagaaaatatgcttgtacgggatctacgtgaccacatgtcagatttttgtgtaagtgtcaaga-ggtgt 41423716  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     || ||| |||| |||||| ||||||||| ||||    
T  41423715 attaccatctaatgatgtctatgtatcataactc 41423682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 8080351 - 8080483
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| |||||||| ||| |||||||| |||||||    
T  8080351 atgcaataggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttatgtaggtgtcaa-agggtgt 8080449  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||||||| | |||| ||||||||||||||    
T  8080450 attgccacctaagggtgtctatgtatcattactc 8080483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 387 - 527
Target Start/End: Complemental strand, 38837357 - 38837217
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||| ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||| |||||||||||| ||||| |     
T  38837357 tacatcccatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtaggtgt-ac 38837259  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||||||| ||||||||||| | |||| ||||||||||||||    
T  38837258 aagggtgtattgccacctaagggtgtctatgtatcattactc 38837217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 7389515 - 7389389
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||  ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| || |||| |||||    
T  7389515 taggaagagagagtaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-agagtgtattgcc 7389417  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||| ||||||||||||||    
T  7389416 acctaagggtgtctatgtatcattactc 7389389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 387 - 485
Target Start/End: Original strand, 27744269 - 27744368
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||||||||||||||||||| |||||| || ||||||||||||||  || ||| ||||| |  |||||||| |||||||||||||||| ||||    
T  27744269 tacatcccatgcactaggaagagagaagaggagaggatagagaaaatgtgcttatgagggatccacgtggccacatgtcagatttttgtgtgggtatcaa 27744368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 40846087 - 40846213
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| |||  | ||| ||| |||| || || ||||||||||||||||||||| ||||||| |||||| |||||    
T  40846087 taggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatataactacatgttagatttttgtgtggatgtcaag-gggtgtattgcc 40846185  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| |||||  ||||||||| ||||    
T  40846186 acctaaggatgtttatgtatcataactc 40846213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 395 - 524
Target Start/End: Complemental strand, 3784127 - 3783998
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||| | || || ||| ||||||||||||||||||||| | | |||    
T  3784127 atgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aagatgt 3784029  T
Q  494 tttgccacctaaagatgtccatgtatcatta 524  Q
     ||||||||||| | |||| |||||||||||    
T  3784028 attgccacctaagggtgtctatgtatcatta 3783998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 386 - 527
Target Start/End: Original strand, 35468814 - 35468955
Alignment:
Q  386 atacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtca 484  Q
    |||||||  ||| ||||||||||||||| |||| | |||||||||| |||| | |||  ||||||||||   ||||| |||||||||| |||||||||||    
T  35468814 atacatctcatgaactaggaagagagaagaggataggaaagagaaagtgtgtttgtgcagggtccacatggtcacatattagatttttatgtgggtgtca 35468913  T
Q  485 agagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
    | | | ||| |||||| |||| |||||| ||||||||||||||    
T  35468914 a-atgatgtattgccatctaaggatgtctatgtatcattactc 35468955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 527
Target Start/End: Complemental strand, 3434666 - 3434562
Alignment:
Q  423 aaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatca 521  Q
    ||||||||| |||||| ||| ||| ||||| | || || ||| || |||||||||||||||||| ||||||| ||||||||||| |||||| ||||||||    
T  3434666 aaagagaaagtgtgcttgtgcgggatccacgtgactacgtgtcagttttttgtgtgggtgtcaa-agggtgtattgccacctaaggatgtctatgtatca 3434568  T
Q  522 ttactc 527  Q
    ||||||    
T  3434567 ttactc 3434562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 4999482 - 4999614
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| ||||||| ||||||||| |||| | |||  |||||||| | || || | | ||||||||||||||||||||| | |||||    
T  4999482 atgcattaggaagagagaagaggagataaaagagaaagtgtgtttgtgcggggtccacgtgactacgtatcagatttttgtgtgggtgtcaa-aaggtgt 4999580  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||| |||| | |||| ||||||||||||||    
T  4999581 attgccatctaagggtgtctatgtatcattactc 4999614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 423 - 527
Target Start/End: Original strand, 36361909 - 36362013
Alignment:
Q  423 aaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatca 521  Q
    ||||||||| |||||| ||||||| ||||| | || || ||| ||||||||||||||||||||| ||| ||| ||||||||||| | |||| ||||||||    
T  36361909 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aggatgtattgccacctaagggtgtctatgtatca 36362007  T
Q  522 ttactc 527  Q
    ||||||    
T  36362008 ttactc 36362013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 401 - 504
Target Start/End: Complemental strand, 8238339 - 8238236
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| || || |||||| ||||||||||||||||||||| ||||||| |||||    
T  8238339 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatgactacatgtcagatttttgtgtgggtgtcaa-agggtgtattgcc 8238241  T
Q  500 accta 504  Q
    |||||    
T  8238240 accta 8238236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 406 - 504
Target Start/End: Original strand, 2318222 - 2318320
Alignment:
Q  406 agagagaaaaggagatgaaagagaaaatgtgctcgtgt-gggtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccaccta 504  Q
    |||||||| | ||||||||||||||| | ||||  ||| |||||||| | |||||| || ||||||||||||||||||||||| ||||| ||||||||||    
T  2318222 agagagaagatgagatgaaagagaaagtatgcttatgtcgggtccacgtgaccacacgtcagatttttgtgtgggtgtcaaga-ggtgtcttgccaccta 2318320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 22343487 - 22343361
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||   ||||||| |||||||||||||||||||||| |||||| |||||    
T  22343487 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggtcacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 22343389  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  22343388 acctaagggtgtttatgtatcataactc 22343361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 527
Target Start/End: Original strand, 32564400 - 32564526
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| |||  | ||| ||| |||| ||  |||||||| |||||||||||||||||||||| |||||| |||||    
T  32564400 taggaagagagaagagaagaagaaagagaaagtgtatttgtgcggggtccatatagccacatgtcagatttttgtgtgggtgtcaag-gggtgtattgcc 32564498  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    ||||||  ||||  ||||||||| ||||    
T  32564499 acctaagaatgtttatgtatcataactc 32564526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 41915867 - 41915741
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| || ||| |||||||||| ||| || ||| ||| |||| ||  |||||||| |||||||||||| ||||||||| |||||| |||||    
T  41915867 taggaagagagaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggccacatgtcagatttttgtgtaggtgtcaag-gggtgtattgcc 41915769  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  41915768 acctaagggtgtttatgtatcataactc 41915741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 401 - 486
Target Start/End: Original strand, 16374798 - 16374884
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaag 486  Q
    ||||||||||||||| ||||||||||||||  |||||| ||||| | ||||| | ||||| ||| |||||||||||||| |||||||    
T  16374798 taggaagagagaaaaagagatgaaagagaatgtgtgcttgtgtgagatccacgtgaccacgtgtcagatttttgtgtggatgtcaag 16374884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 456 - 538
Target Start/End: Original strand, 46374832 - 46374913
Alignment:
Q  456 ccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactcgttgttaaagt 538  Q
    |||| ||| |||||||||||||||||| || ||||||| ||||||||||| |||||| ||||||||| ||||||  |||||||    
T  46374832 ccacgtgtcagatttttgtgtgggtgttaa-agggtgtgttgccacctaaggatgtctatgtatcataactcgtcattaaagt 46374913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 19436155 - 19436287
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| |||||||||| || || |||  ||||||||| ||||||  || ||| ||||| | || || ||| ||||||||||||||||||||| ||| |||    
T  19436155 atgcattaggaagagaaaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtgactacgtgtcagatttttgtgtgggtgtcaaaagg-tgt 19436253  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||||||| |||||| ||||||||||||||    
T  19436254 attgtcacctaaggatgtctatgtatcattactc 19436287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 423 - 527
Target Start/End: Complemental strand, 36362130 - 36362026
Alignment:
Q  423 aaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatca 521  Q
    ||||||||| |||||| ||||||| ||||| | || || ||| ||||||||||||||||||||| ||| ||| || |||||||| | |||| ||||||||    
T  36362130 aaagagaaagtgtgcttgtgtggggtccacgtgactacgtgtcagatttttgtgtgggtgtcaa-aggatgtattaccacctaagggtgtctatgtatca 36362032  T
Q  522 ttactc 527  Q
    ||||||    
T  36362031 ttactc 36362026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 403 - 527
Target Start/End: Original strand, 39255900 - 39256023
Alignment:
Q  403 ggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtgg-gtccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgccac 501  Q
    ||||||||||| ||||||||||||||||| ||| || |||||| ||||||  | |||| ||| |||||||||| ||||| |||||  ||||| |||||||    
T  39255900 ggaagagagaagaggagatgaaagagaaagtgttcttgtgtggagtccac-gtgccacgtgtcagatttttgtatgggtatcaag-tggtgtattgccac 39255997  T
Q  502 ctaaagatgtccatgtatcattactc 527  Q
    |||| | |||| ||||||||| ||||    
T  39255998 ctaaggttgtctatgtatcataactc 39256023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 401 - 522
Target Start/End: Complemental strand, 35523002 - 35522881
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    ||||||||||||| | ||||  ||||||||| |||||| ||| ||| |||| ||  |||| ||| |||||||||||||||||| || | ||||| |||||    
T  35523002 taggaagagagaagaagagagaaaagagaaagtgtgcttgtgcgggatccatatggccacgtgtcagatttttgtgtgggtgttaa-atggtgtattgcc 35522904  T
Q  500 acctaaagatgtccatgtatcat 522  Q
    || ||| |||||| |||||||||    
T  35522903 acttaaggatgtctatgtatcat 35522881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 40957839 - 40957707
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| | ||||  ||||||||| |||||| ||  ||| ||||| | || || ||| |||||||||||||||| |||| || ||||    
T  40957839 atgcattaggaagagagaagatgagagaaaagagaaagtgtgcttgtacgggatccacgtgactacgtgtcagatttttgtgtgggtatcaa-agagtgt 40957741  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||   |||| ||||||||||||||    
T  40957740 attgccacctaagagtgtctatgtatcattactc 40957707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 403 - 482
Target Start/End: Complemental strand, 3694491 - 3694411
Alignment:
Q  403 ggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgt 482  Q
    ||||||||||| ||||||  ||||||||| |||||| ||| ||| ||||||| || || ||| ||||||||||||||||||    
T  3694491 ggaagagagaagaggagagaaaagagaaagtgtgcttgtgcgggatccacatgactacgtgtcagatttttgtgtgggtgt 3694411  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 465 - 536
Target Start/End: Original strand, 10343602 - 10343672
Alignment:
Q  465 agatttttgtgtgggtgtcaagagggtgttttgccacctaaagatgtccatgtatcattactcgttgttaaa 536  Q
    |||||||||||||||||||||||  |||| || |||||||| | |||| |||||||||||||| ||| ||||    
T  10343602 agatttttgtgtgggtgtcaaga-tgtgtatttccacctaagggtgtctatgtatcattactctttggtaaa 10343672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 401 - 527
Target Start/End: Complemental strand, 38044323 - 38044197
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgttttgcc 499  Q
    |||||||||| || || ||| |||||||||| ||| || ||| ||| |||| ||  | |||||| |||||||||||||| ||||||| |||||| |||||    
T  38044323 taggaagagaaaagagaagaagaaagagaaagtgtacttgtgcggggtccatatggctacatgtcagatttttgtgtggatgtcaag-gggtgtattgcc 38044225  T
Q  500 acctaaagatgtccatgtatcattactc 527  Q
    |||||| | |||  ||||||||| ||||    
T  38044224 acctaagggtgtttatgtatcataactc 38044197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 401 - 478
Target Start/End: Original strand, 32951467 - 32951545
Alignment:
Q  401 taggaagagagaaaaggagatgaaagagaaaatgtgctcgtg-tgggtccacattaccacatgttagatttttgtgtgg 478  Q
    ||||||||||||| ||||||  ||||||||| |||||| |||  |||||||| | || || ||||||||||||||||||    
T  32951467 taggaagagagaagaggagagaaaagagaaagtgtgcttgtgcggggtccacgtgactacgtgttagatttttgtgtgg 32951545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1268 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold1268
Description:

Target: scaffold1268; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 897 - 1029
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| ||| ||| | ||| | || || ||| || ||||||||||| ||| || |||||||    
T  897 atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaa-agggtgt 995  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||||||||| ||||||||||||||    
T  996 attgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1267 (Bit Score: 54; Significance: 1e-21; HSPs: 1)
Name: scaffold1267
Description:

Target: scaffold1267; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 395 - 527
Target Start/End: Original strand, 897 - 1029
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||||||||||||||||| |||||| |||||||||| |||||| ||| ||| | ||| | || || ||| || ||||||||||| ||| || |||||||    
T  897 atgcactaggaagagagaagaggagaggaaagagaaagtgtgcttgtgcgggattcacgtgactacgtgtcagttttttgtgtggatgttaa-agggtgt 995  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||||||||||||||| ||||||||||||||    
T  996 attgccacctaaagatgtctatgtatcattactc 1029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0321 (Bit Score: 42; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 387 - 527
Target Start/End: Original strand, 10069 - 10209
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtg-ggtccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    |||| |||||||| ||||||||||||| ||||||  ||||||||| |||||| ||  | ||||||| | || || ||| |||||||| ||||| ||||||    
T  10069 tacaccctatgcattaggaagagagaagaggagagaaaagagaaagtgtgcttgtacgcggtccacgtgactacgtgtcagatttttatgtggatgtcaa 10168  T
Q  486 gagggtgttttgccacctaaagatgtccatgtatcattactc 527  Q
     ||| ||| ||||||||||||| |||| ||||||||| ||||    
T  10169 -aggatgtattgccacctaaaggtgtctatgtatcataactc 10209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0237 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 395 - 527
Target Start/End: Complemental strand, 4161 - 4029
Alignment:
Q  395 atgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaagagggtgt 493  Q
    ||||| ||||||||||||| || |||  ||||||||| ||||||  || ||| ||||| | || || ||| |||||||||||||||||| || ||| |||    
T  4161 atgcattaggaagagagaagagaagagaaaagagaaagtgtgcttatgcgggatccacgtaactacgtgtcagatttttgtgtgggtgttaaaagg-tgt 4063  T
Q  494 tttgccacctaaagatgtccatgtatcattactc 527  Q
     |||||| |||||| |||| ||||||||||||||    
T  4062 attgccatctaaaggtgtctatgtatcattactc 4029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0018 (Bit Score: 37; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 387 - 502
Target Start/End: Complemental strand, 152638 - 152523
Alignment:
Q  387 tacatcctatgcactaggaagagagaaaaggagatgaaagagaaaatgtgctcgtgtggg-tccacattaccacatgttagatttttgtgtgggtgtcaa 485  Q
    ||||||| ||| | ||| ||||||||| || ||| |||||||||| |||  | ||| ||| |||| || ||||||||| |||||||||||||||||||||    
T  152638 tacatcccatgtattagaaagagagaagagaagaagaaagagaaagtgtatttgtgcgggatccatatgaccacatgtcagatttttgtgtgggtgtcaa 152539  T
Q  486 gagggtgttttgccacc 502  Q
    | |||||| ||||||||    
T  152538 g-gggtgtattgccacc 152523  T

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