View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2085-Insertion-9 (Length: 698)
Name: NF2085-Insertion-9
Description: NF2085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2085-Insertion-9 |
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Alignment Details
Target: chr7 (Bit Score: 555; Significance: 0; HSPs: 2)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 555; E-Value: 0
Query Start/End: Original strand, 8 - 629
Target Start/End: Complemental strand, 31627186 - 31626558
Alignment:
| Q |
8 |
ctattctcattctactttctaattccaaacactatccttctcagatctaaccttcatctctcttcacaaataaaacaaaaaaccccaaattcatttaatt |
107 |
Q |
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| T |
31627186 |
ctattctcattctactttctaattccaaacactatccttctcagatctaaccttcatctctcttcacaaataaaacaaaaaaccccaaattcatttaatt |
31627087 |
T |
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| Q |
108 |
ctatccctaaatgcacaaattcaagctcttagctacacaatgcgccatcgccaacagccccacacgcagtcccaccaccagtcccgtcatccacctccgc |
207 |
Q |
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| T |
31627086 |
ctatccctaaatgcacaaattcaagctcttagctacacaatgcgccatcgccaacagccccacacgcagtcccaccaccagtcccgtcatccacctccgc |
31626987 |
T |
|
| Q |
208 |
cgccgcaaaacccttcgcatgttcctcactcgtcctcacgaccgccgccgtttccatcctcctcccctagatccacctcctccttcctccgatgaagtca |
307 |
Q |
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|||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31626986 |
cgccgcaaaaccctccgcatgttcctcactcgtccgcacgaccgccgccgtttccatcctcctcccctagatccacctcctccttcctccgatgaagtca |
31626887 |
T |
|
| Q |
308 |
aagtccgccacaagcttaaagacctattcatctcactcgaccatctccgccgtcacttccgtctccgccgacgatgctacaagacgagaagaatatctcc |
407 |
Q |
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|||| |||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
31626886 |
aagttcgccacaagcttaaagacctattcgtctc-ctc-tccatctccgccgtcacttccgtctccgccgacgatgctacaagacgagaagaatatctcc |
31626789 |
T |
|
| Q |
408 |
---------caacagcagcagaattacgatcagaaagattgctccaccgtcgctgtccgattccgaactggatctccgttccgtcgatcttccgccgtcg |
498 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |
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| T |
31626788 |
caacagcagcaacagcagcagaattacgatcagaaagattgctccaccgtcgctgtccgattccgaactggatctccgttccgtcgatcttctgccgtcg |
31626689 |
T |
|
| Q |
499 |
cggctctccggccggtgtcatcagcgtttcgttacaggttactgagaagagcatggcggccggtattgttcactattcctgagtagcggttacagtttct |
598 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |
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| T |
31626688 |
cggctctccggccggtgtcatcagcgtttcgttacaggttactgagaagagcatggcggccggtattgttcactattcctgagtaacggttacagtttct |
31626589 |
T |
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| Q |
599 |
ctctactgttactgtacggttgaattcagat |
629 |
Q |
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||||||||||||||||||||||||||||||| |
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| T |
31626588 |
ctctactgttactgtacggttgaattcagat |
31626558 |
T |
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Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 665 - 698
Target Start/End: Complemental strand, 31626521 - 31626488
Alignment:
| Q |
665 |
ttattaataatcacgtttagttgtagccaaatga |
698 |
Q |
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|||||||||||||||||||||||||||||||||| |
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| T |
31626521 |
ttattaataatcacgtttagttgtagccaaatga |
31626488 |
T |
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