View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20853_high_20 (Length: 317)

Name: NF20853_high_20
Description: NF20853
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20853_high_20
NF20853_high_20
[»] chr2 (63 HSPs)
chr2 (15-289)||(10458638-10458911)
chr2 (17-156)||(10513677-10513815)
chr2 (17-156)||(10855861-10856000)
chr2 (15-156)||(10458320-10458459)
chr2 (56-156)||(7465080-7465180)
chr2 (17-156)||(10502050-10502187)
chr2 (31-156)||(10484094-10484217)
chr2 (180-258)||(10539258-10539336)
chr2 (15-141)||(10539953-10540077)
chr2 (15-156)||(10502647-10502786)
chr2 (44-156)||(10468527-10468637)
chr2 (30-156)||(10484694-10484821)
chr2 (180-251)||(10855474-10855545)
chr2 (15-156)||(10484396-10484535)
chr2 (30-152)||(10540530-10540652)
chr2 (34-158)||(10467990-10468112)
chr2 (32-112)||(10894577-10894657)
chr2 (188-258)||(10468451-10468521)
chr2 (183-251)||(9078299-9078367)
chr2 (44-148)||(10468826-10468930)
chr2 (41-156)||(10513100-10513213)
chr2 (30-156)||(7468422-7468545)
chr2 (184-251)||(7468566-7468633)
chr2 (43-141)||(10468292-10468388)
chr2 (41-143)||(10855565-10855665)
chr2 (180-251)||(10856081-10856152)
chr2 (15-81)||(10502425-10502491)
chr2 (15-111)||(10855296-10855392)
chr2 (180-251)||(10468210-10468281)
chr2 (34-156)||(10513394-10513513)
chr2 (30-156)||(10539346-10539470)
chr2 (180-251)||(10539864-10539935)
chr2 (180-250)||(10458994-10459064)
chr2 (180-250)||(10484916-10484986)
chr2 (71-156)||(10501766-10501849)
chr2 (182-248)||(10513021-10513087)
chr2 (44-156)||(10539649-10539760)
chr2 (180-250)||(10540751-10540820)
chr2 (47-115)||(7465836-7465902)
chr2 (182-251)||(10501685-10501754)
chr2 (34-156)||(7465335-7465455)
chr2 (180-226)||(10444863-10444909)
chr2 (180-254)||(10468734-10468808)
chr2 (180-250)||(10469039-10469108)
chr2 (61-111)||(10483567-10483617)
chr2 (180-242)||(10540163-10540225)
chr2 (36-110)||(27963856-27963930)
chr2 (189-247)||(27964034-27964092)
chr2 (189-247)||(28107783-28107841)
chr2 (180-249)||(7464903-7464972)
chr2 (183-236)||(10484628-10484681)
chr2 (181-220)||(10484044-10484083)
chr2 (180-235)||(10513915-10513970)
chr2 (180-251)||(10539564-10539635)
chr2 (102-156)||(10483795-10483849)
chr2 (180-250)||(10502866-10502936)
chr2 (209-242)||(7468286-7468319)
chr2 (184-213)||(9082021-9082050)
chr2 (99-156)||(10540235-10540292)
chr2 (180-254)||(10540438-10540516)
chr2 (67-111)||(10458064-10458108)
chr2 (180-251)||(10467912-10467984)
chr2 (30-86)||(10540292-10540347)
[»] chr1 (5 HSPs)
chr1 (180-254)||(24050299-24050373)
chr1 (15-110)||(18488783-18488878)
chr1 (180-250)||(24050003-24050073)
chr1 (30-111)||(24050461-24050543)
chr1 (111-156)||(24049948-24049993)
[»] chr7 (1 HSPs)
chr7 (60-156)||(8670754-8670848)
[»] chr4 (1 HSPs)
chr4 (15-110)||(17733308-17733403)


Alignment Details
Target: chr2 (Bit Score: 222; Significance: 1e-122; HSPs: 63)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 15 - 289
Target Start/End: Complemental strand, 10458911 - 10458638
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaatttt 114  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||    
T  10458911 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttgaagaacttttgtattatttttctgcgatctctctttttaaattctaatttt 10458812  T
Q  115 agcttatactagtttaacgaggcatgaaaaatgattgaaaactagtgatttgagactagtaattttggtgtgcactcataagatcattttcatgtctctg 214  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| |||||||||||||||||||||||||    
T  10458811 agcttatactagtttaacgaggcatgaaaaatgattgaaaactagtgatttgaggcaagtaattttggtgtgcaatcataagatcattttcatgtctctg 10458712  T
Q  215 ttttcacttattccattttgagactagtaattttgtgactaaagnnnnnnnnctctccaaatataggttcctcat 289  Q
    ||||||||||||||||||||||||| ||||||||||||||||||        |||||||||||||||||||||||    
T  10458711 ttttcacttattccattttgagactggtaattttgtgactaaag-cttttttctctccaaatataggttcctcat 10458638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 10513815 - 10513677
Alignment:
Q  17 attttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttag 116  Q
    |||||| || |||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||||||| |||||||||||||| |||| ||||    
T  10513815 attttcttccagttttgtggatcctcccattaaa-caaatgtctttggagaacttttgtatgattgttctgccatatctctttttaaattttaatattag 10513717  T
Q  117 cttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||||||||||||| |||||||||||||||||||| |||||    
T  10513716 cttatactagtttgacgaggcatgaaaaatgattcaaaac 10513677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 10856000 - 10855861
Alignment:
Q  17 attttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttag 116  Q
    ||||||| || | ||||||||||  || |||||||| |||||||||||||||||||||||  | | ||||||||| ||||||||||||||| ||||||||    
T  10856000 attttcaccatgatttgtggatctcccaattaaatcgaatgtctttggagaacttttgtaaaactgttctgccatatctctttttaaattcaaattttag 10855901  T
Q  117 cttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||| ||||||||||  ||||||||||| ||||||||||||    
T  10855900 cttttactagtttagtgaggcatgaaacatgattgaaaac 10855861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 9e-30
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 10458459 - 10458320
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaatttt 114  Q
    ||||||||| || | |||||||||| |||||||||||  |||||||||||||||| ||||||| ||| ||||| ||| ||| |||  |||||||||||||    
T  10458459 agattttcaccatgatttgtggatcttcccattaaatttaatgtctttggagaacatttgtataattgttctgtcatatctattt--aaattctaatttt 10458362  T
Q  115 agcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||||| ||||||||||||||||||||||| |||  |||||||    
T  10458361 agcttttactagtttaacgaggcatgaaacatgtctgaaaac 10458320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 56 - 156
Target Start/End: Original strand, 7465080 - 7465180
Alignment:
Q  56 tgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatgaaaaatgattgaaaa 155  Q
    ||||||| ||||| |||||||||||||||||| ||| || ||||||||||||| |||||||||| ||||||||||||||||| ||||| |||||||||||    
T  7465080 tgtcttttgagaatttttgtattatttttctgtcatatccctttttaaattctgattttagcttttactagtttaacgaggcttgaaacatgattgaaaa 7465179  T
Q  156 c 156  Q
    |    
T  7465180 c 7465180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 17 - 156
Target Start/End: Complemental strand, 10502187 - 10502050
Alignment:
Q  17 attttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttag 116  Q
    ||||||| || | |||||||||| |||||||||||| | |||||||||||||||||||||| | | || |||||| ||| |||  |||||||||||||||    
T  10502187 attttcaccatgatttgtggatcttcccattaaatcgattgtctttggagaacttttgtataactgttttgccatatctattt--aaattctaattttag 10502090  T
Q  117 cttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||| ||||||||||| ||| ||||||| |||||| |||||    
T  10502089 cttttactagtttaatgagacatgaaacatgattaaaaac 10502050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 31 - 156
Target Start/End: Complemental strand, 10484217 - 10484094
Alignment:
Q  31 ttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagttta 130  Q
    ||||||||| |||||||||| | |||||||||||||||| ||| ||| ||| ||||||||| ||||  ||||||||||||||||||||| ||||| ||||    
T  10484217 ttgtggatcttcccattaaaccgaatgtctttggagaacatttatataattgttctgccatatctc--tttaaattctaattttagcttttactaattta 10484120  T
Q  131 acgaggcatgaaaaatgattgaaaac 156  Q
    | || ||| |||| ||||||||||||    
T  10484119 atgaagcaagaaatatgattgaaaac 10484094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 180 - 258
Target Start/End: Complemental strand, 10539336 - 10539258
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtgactaaag 258  Q
    ||||||||| ||||||||||||||||||||||||  |||||||||||||||||||||||| ||||||||||||| ||||    
T  10539336 tggtgtgcattcataagatcattttcatgtctcttctttcacttattccattttgagactcgtaattttgtgacaaaag 10539258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 15 - 141
Target Start/End: Complemental strand, 10540077 - 10539953
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaatttt 114  Q
    ||||||||| || | |||||||||| || ||||||||| |||||||||||||||||||||||| ||| |||| |||  | ||| |||||||| |||||||    
T  10540077 agattttcaccatgatttgtggatcttctcattaaatcgaatgtctttggagaacttttgtataattgttcttcca--tatctatttaaattgtaatttt 10539980  T
Q  115 agcttatactagtttaacgaggcatga 141  Q
    ||||| | ||||||||| |||||||||    
T  10539979 agcttttcctagtttaatgaggcatga 10539953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 10502786 - 10502647
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaatttt 114  Q
    ||||||||| || | |||||||||| ||   ||||||| ||||||||  ||||| ||||||||  || ||||||||| ||||| |||||||||| || ||    
T  10502786 agattttcaccatgatttgtggatcttcatcttaaatcgaatgtctt--gagaatttttgtatacttgttctgccatatctctctttaaattctgatatt 10502689  T
Q  115 agcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||||| ||||||||||| ||||||||||| ||||||||||||    
T  10502688 agcttttactagtttaatgaggcatgaaacatgattgaaaac 10502647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 10468637 - 10468527
Alignment:
Q  44 cattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatgaaa 143  Q
    |||||||| |||||| |||||||||||||||||| | | |||| |||  | ||  ||||||||||||||||||||| |||||||||||||| ||||||||    
T  10468637 cattaaattaaatgtttttggagaacttttgtataaatgttcttcca--tatccatttaaattctaattttagcttttactagtttaacgaagcatgaaa 10468540  T
Q  144 aatgattgaaaac 156  Q
     ||||||||||||    
T  10468539 catgattgaaaac 10468527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 10484821 - 10484694
Alignment:
Q  30 tttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactag-tt 128  Q
    |||||||||| ||| || ||||  ||||||||||||||||||||||||   | ||||||||| || ||||||||||||| |||||||  | |||||| ||    
T  10484821 tttgtggatcttcctataaaattgaatgtctttggagaacttttgtatatctgttctgccatgtcgctttttaaattctgattttagactttactagttt 10484722  T
Q  129 taacgaggcatgaaaaatgattgaaaac 156  Q
    ||| ||||||||||| ||||||||||||    
T  10484721 taatgaggcatgaaacatgattgaaaac 10484694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 10855545 - 10855474
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    ||||||||||||||||||||||||||||||||||| ||||| ||||| |||||| |||||||| ||||||||    
T  10855545 tggtgtgcactcataagatcattttcatgtctctgctttcatttattgcattttaagactagttattttgtg 10855474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 10484535 - 10484396
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaatttt 114  Q
    ||||||||| || | |||||||||| ||||||||||||||||||||||| ||||||||||||| | | |||  |||  | ||| | |||||| |||||||    
T  10484535 agattttcaccatgatttgtggatcttcccattaaatcaaatgtctttgcagaacttttgtataaatgttcatcca--tatctatataaattttaatttt 10484438  T
Q  115 agcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||||| ||||  ||||| |||||| |||| ||||||||||||    
T  10484437 agcttttacttatttaatgaggcacgaaacatgattgaaaac 10484396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 30 - 152
Target Start/End: Complemental strand, 10540652 - 10540530
Alignment:
Q  30 tttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagttt 129  Q
    ||||| |||| |||| ||||||||||||| ||||| |||||||||| | ||| |||||| ||  |  |||| |||||||||||||| ||| |||||||||    
T  10540652 tttgttgatcttccctttaaatcaaatgtttttggggaacttttgtgtaattgttctgcaataacaattttcaaattctaattttatcttttactagttt 10540553  T
Q  130 aacgaggcatgaaaaatgattga 152  Q
    || ||||||||| ||||||||||    
T  10540552 aatgaggcatgacaaatgattga 10540530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 34 - 158
Target Start/End: Complemental strand, 10468112 - 10467990
Alignment:
Q  34 tggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacg 133  Q
    |||||| |||||||||||  ||||||||||| |||||||||||||||| |||||||   | ||| |||||| |||||||||  ||| || |||||||| |    
T  10468112 tggatcttcccattaaattgaatgtctttggggaacttttgtattattgttctgcc--ttgtctatttaaaatctaatttttacttttattagtttaatg 10468015  T
Q  134 aggcatgaaaaatgattgaaaacta 158  Q
    |||||||||| ||||||||| ||||    
T  10468014 aggcatgaaacatgattgaacacta 10467990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 32 - 112
Target Start/End: Original strand, 10894577 - 10894657
Alignment:
Q  32 tgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaatt 112  Q
    |||| ||| |||||||||||| ||||||||||| ||||||||||||  || ||||||||| ||||||||||||||||||||    
T  10894577 tgtgtatcttcccattaaatctaatgtctttggggaacttttgtatagttgttctgccatatctctttttaaattctaatt 10894657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 8e-18
Query Start/End: Original strand, 188 - 258
Target Start/End: Complemental strand, 10468521 - 10468451
Alignment:
Q  188 actcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtgactaaag 258  Q
    ||||||||||||||||||| ||||||| ||||| ||||| ||||||||||||||| |||||||| ||||||    
T  10468521 actcataagatcattttcaagtctctgctttcatttattgcattttgagactagtgattttgtggctaaag 10468451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 183 - 251
Target Start/End: Original strand, 9078299 - 9078367
Alignment:
Q  183 tgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    |||||||||||||||||||||||||||||||| ||||| ||||| ||||||| | ||||| ||||||||    
T  9078299 tgtgcactcataagatcattttcatgtctctgctttcatttattgcattttgtgtctagtgattttgtg 9078367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 44 - 148
Target Start/End: Complemental strand, 10468930 - 10468826
Alignment:
Q  44 cattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatgaaa 143  Q
    ||||||||| |||  || |||||||||||||| | ||| ||||||||| ||| ||| |||||||| |||||||| | | ||||||||| |||||||||||    
T  10468930 cattaaatcgaattcctatggagaacttttgtctaattgttctgccatatctatttctaaattcttattttagcattttctagtttaatgaggcatgaaa 10468831  T
Q  144 aatga 148  Q
    |||||    
T  10468830 aatga 10468826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 10513213 - 10513100
Alignment:
Q  41 tcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatg 140  Q
    |||||||||||  |||||||| |||||| ||||||||||||||| |||||  | ||| ||||||||||||||||||||  || |||| ||| ||||||||    
T  10513213 tcccattaaattgaatgtcttgggagaaattttgtattatttttttgcca--tatctatttaaattctaattttagctcttagtagtctaaagaggcatg 10513116  T
Q  141 aaaaatgattgaaaac 156  Q
      | ||||||||||||    
T  10513115 gcacatgattgaaaac 10513100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 30 - 156
Target Start/End: Original strand, 7468422 - 7468545
Alignment:
Q  30 tttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagttt 129  Q
    |||||||||| ||||||||| || ||||||||||  |||||||||||| ||| ||||  ||  | ||| ||||||||||||||||||||| ||||| |||    
T  7468422 tttgtggatcttcccattaagtcgaatgtctttgctgaacttttgtataattgttctttca--tgtctatttaaattctaattttagcttttactaattt 7468519  T
Q  130 aacgaggcatgaaaaatgattgaaaac 156  Q
     ||||||||| ||| |||| |||||||    
T  7468520 -acgaggcataaaacatgagtgaaaac 7468545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 184 - 251
Target Start/End: Original strand, 7468566 - 7468633
Alignment:
Q  184 gtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    |||||||||||||||||||||||| | |||| ||||| ||||| ||||||||||||||| ||||||||    
T  7468566 gtgcactcataagatcattttcatatttctgctttcatttattgcattttgagactagtgattttgtg 7468633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 43 - 141
Target Start/End: Complemental strand, 10468388 - 10468292
Alignment:
Q  43 ccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatga 141  Q
    |||||||||| ||||||||||||||||||||| || ||| ||||  ||| ||| |||  |||||||||||| ||||| ||||||||||| |||||||||    
T  10468388 ccattaaatcgaatgtctttggagaacttttggataattgttctttcatatctattt--aaattctaatttcagcttttactagtttaatgaggcatga 10468292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 41 - 143
Target Start/End: Complemental strand, 10855665 - 10855565
Alignment:
Q  41 tcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatg 140  Q
    |||||||| |||||||||||||||||||||| ||||| ||| || || ||  |||||||  |||||| ||||||| ||| ||||||||||| ||||||||    
T  10855665 tcccattatatcaaatgtctttggagaacttctgtataattgttttgtcacatctcttt--aaattcgaattttaacttttactagtttaatgaggcatg 10855568  T
Q  141 aaa 143  Q
    |||    
T  10855567 aaa 10855565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 10856152 - 10856081
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    ||||||||||||||||||||||||||||||||||| |||   ||||| |||||| |||||||| ||||||||    
T  10856152 tggtgtgcactcataagatcattttcatgtctctgcttttgtttattgcattttaagactagtgattttgtg 10856081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 15 - 81
Target Start/End: Complemental strand, 10502491 - 10502425
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatt 81  Q
    ||||||||| || | |||||||||| |||||||||||| ||||||||||||||||||||| ||||||    
T  10502491 agattttcaccatgatttgtggatcttcccattaaatcgaatgtctttggagaacttttgcattatt 10502425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 15 - 111
Target Start/End: Complemental strand, 10855392 - 10855296
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaat 111  Q
    ||||||||| || | |||||| ||  || ||||||||| ||||| ||||||||||||||||||| || ||||||||| ||||||  |||||||||||    
T  10855392 agattttcaccatgatttgtgaattttctcattaaatcgaatgtttttggagaacttttgtattgttgttctgccatatctcttaataaattctaat 10855296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 10468281 - 10468210
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    ||||||||||||||||||| | ||||||||||||||||||| ||||    ||||||||||||| ||||||||    
T  10468281 tggtgtgcactcataagataactttcatgtctctgttttcatttatattgttttgagactagtgattttgtg 10468210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 34 - 156
Target Start/End: Complemental strand, 10513513 - 10513394
Alignment:
Q  34 tggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacg 133  Q
    |||||| || ||||||||||||||| | ||| ||||| ||| || ||| |||||||   |||||||  ||||||||||||||||||  |||||||||| |    
T  10513513 tggatcttctcattaaatcaaatgt-tatggtgaactcttgcataattgttctgccggatctcttt--aaattctaattttagctttaactagtttaatg 10513417  T
Q  134 aggcatgaaaaatgattgaaaac 156  Q
    ||||||||||||| || ||||||    
T  10513416 aggcatgaaaaattatcgaaaac 10513394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 30 - 156
Target Start/End: Complemental strand, 10539470 - 10539346
Alignment:
Q  30 tttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagttt 129  Q
    ||||| |||| ||||||||| |||||| |||||| |  ||||| |||| | | ||||||||| |||  ||  ||||||||||||||| |  |||||||||    
T  10539470 tttgttgatcttcccattaactcaaatatctttgaatcactttggtataagtgttctgccatatctaatt--aaattctaattttaggtattactagttt 10539373  T
Q  130 aacgaggcatgaaaaatgattgaaaac 156  Q
    || ||||||||||| ||||||||||||    
T  10539372 aatgaggcatgaaacatgattgaaaac 10539346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 10539935 - 10539864
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    ||||||| |||||| | |||||||||||||||||| ||||| ||||| ||||||||||| ||| ||||||||    
T  10539935 tggtgtgaactcattatatcattttcatgtctctgctttcatttattgcattttgagacaagtgattttgtg 10539864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 10459064 - 10458994
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgt 250  Q
    ||||||||||||||||||||||||||||||||||  ||||| || || || ||||||||| || |||||||    
T  10459064 tggtgtgcactcataagatcattttcatgtctcttctttcatttgttgcaatttgagacttgtgattttgt 10458994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 10484986 - 10484916
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgt 250  Q
    |||||||||||||||||||||||||||||| |||  ||||| |||||  ||||||||||| || |||||||    
T  10484986 tggtgtgcactcataagatcattttcatgtatcttctttcatttattgtattttgagacttgtgattttgt 10484916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 71 - 156
Target Start/End: Complemental strand, 10501849 - 10501766
Alignment:
Q  71 tttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||||||| ||| ||||||||| ||| |||  |||||||| ||||||||| || |||||||| ||||||||||| ||||||||||||    
T  10501849 tttgtatgattgttctgccatgtctattt--aaattctagttttagcttttaatagtttaatgaggcatgaaacatgattgaaaac 10501766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 182 - 248
Target Start/End: Complemental strand, 10513087 - 10513021
Alignment:
Q  182 gtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaatttt 248  Q
    |||||||||||||||||||| ||||||||||||  || | ||||| ||||||||||||||| |||||    
T  10513087 gtgtgcactcataagatcatattcatgtctctgcctttatttattgcattttgagactagtgatttt 10513021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 10539760 - 10539649
Alignment:
Q  44 cattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttat-actagtttaacgaggcatgaa 142  Q
    ||||||||  |||||||||||||||||||||||| ||| ||  ||||| ||||  ||| ||||||||||||||||| | |||||| ||   |||||||||    
T  10539760 cattaaattcaatgtctttggagaacttttgtataattgtttggccatatctc--tttcaattctaattttagcttttaactagtctagtaaggcatgaa 10539663  T
Q  143 aaatgattgaaaac 156  Q
    | ||||||||||||    
T  10539662 acatgattgaaaac 10539649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 10540820 - 10540751
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgt 250  Q
    ||||||||||| ||||||| ||||||||||||||| |||||  |||| ||||||||||||||| |||||||    
T  10540820 tggtgtgcacttataagatgattttcatgtctctgctttca-atattacattttgagactagtgattttgt 10540751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 47 - 115
Target Start/End: Original strand, 7465836 - 7465902
Alignment:
Q  47 taaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaatttta 115  Q
    ||||||||||||||||||||||||||||||| | | || |||||  | |||||||||||||||||||||    
T  7465836 taaatcaaatgtctttggagaacttttgtataaatgttttgcca--tatctttttaaattctaatttta 7465902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 182 - 251
Target Start/End: Complemental strand, 10501754 - 10501685
Alignment:
Q  182 gtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    ||||||||||| |||||||||||||||||||||  |||  ||||| ||||||| |||||||| |||||||    
T  10501754 gtgtgcactcacaagatcattttcatgtctctgccttcgtttattgcattttgtgactagtagttttgtg 10501685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 34 - 156
Target Start/End: Original strand, 7465335 - 7465455
Alignment:
Q  34 tggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacg 133  Q
    |||||| ||| |||||||||||||||||||||||||||||| |||||  |||  |||  |  || | |||||| |||||||||||| |||||  |||| |    
T  7465335 tggatcttcctattaaatcaaatgtctttggagaacttttgcattatcgttcatcca--tagctatgtaaattttaattttagcttttactaaattaatg 7465432  T
Q  134 aggcatgaaaaatgattgaaaac 156  Q
    || ||||||| |||||| |||||    
T  7465433 agccatgaaacatgattaaaaac 7465455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 226
Target Start/End: Complemental strand, 10444909 - 10444863
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttatt 226  Q
    ||||||||||||||||||||||||||||||||| | ||||| |||||    
T  10444909 tggtgtgcactcataagatcattttcatgtctccgctttcatttatt 10444863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 10468808 - 10468734
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtgact 254  Q
    |||||||| ||||||| ||||||||||  |||||| |||| |||||| ||| ||||||||||| ||| |||||||    
T  10468808 tggtgtgccctcataaaatcattttcacttctctgctttcgcttattgcatattgagactagtgattgtgtgact 10468734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 10469108 - 10469039
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgt 250  Q
    ||||||| ||||||||||||||||||||||||||| ||| | ||||| || ||||| |||||| |||||||    
T  10469108 tggtgtgtactcataagatcattttcatgtctctgctttaatttattgca-tttgaaactagtgattttgt 10469039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 61 - 111
Target Start/End: Complemental strand, 10483617 - 10483567
Alignment:
Q  61 ttggagaacttttgtattatttttctgccatctctctttttaaattctaat 111  Q
    ||||||||||||||||| ||| |||||| || |||||||||||||||||||    
T  10483617 ttggagaacttttgtatgattgttctgcaatatctctttttaaattctaat 10483567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 242
Target Start/End: Complemental strand, 10540225 - 10540163
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagt 242  Q
    ||||||||| |||||||||| |||| || |||||| ||||| ||||| |||||||||||||||    
T  10540225 tggtgtgcattcataagatcgttttgatttctctgctttcatttattgcattttgagactagt 10540163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 36 - 110
Target Start/End: Complemental strand, 27963930 - 27963856
Alignment:
Q  36 gatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaa 110  Q
    |||| ||| ||| |||| |||||||||||||||||||| ||  ||| ||||||||| |||||||| |||||||||    
T  27963930 gatcttcctattcaatcgaatgtctttggagaacttttttagaattgttctgccatatctcttttaaaattctaa 27963856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Complemental strand, 27964092 - 27964034
Alignment:
Q  189 ctcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattt 247  Q
    |||||||||||||||||||||||||| ||||| ||||| || ||||||| |||| ||||    
T  27964092 ctcataagatcattttcatgtctctgctttcatttattgcactttgagattagtgattt 27964034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 189 - 247
Target Start/End: Original strand, 28107783 - 28107841
Alignment:
Q  189 ctcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattt 247  Q
    |||||||||||||||||||||||||| ||||| ||||| || ||||||| |||| ||||    
T  28107783 ctcataagatcattttcatgtctctgctttcatttattgcactttgagattagtgattt 28107841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 180 - 249
Target Start/End: Original strand, 7464903 - 7464972
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttg 249  Q
    |||||||||||  |||||| |||||||||||| || ||||| ||||| |||||||||||| || ||||||    
T  7464903 tggtgtgcacttgtaagataattttcatgtctgtgctttcatttattgcattttgagacttgtgattttg 7464972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 236
Target Start/End: Complemental strand, 10484681 - 10484628
Alignment:
Q  183 tgtgcactcataagatcattttcatgtctctgttttcacttattccattttgag 236  Q
    ||||||| ||||||||||||| ||| ||||||||||| |||||| |||||||||    
T  10484681 tgtgcacgcataagatcatttacatttctctgttttcgcttattgcattttgag 10484628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 181 - 220
Target Start/End: Complemental strand, 10484083 - 10484044
Alignment:
Q  181 ggtgtgcactcataagatcattttcatgtctctgttttca 220  Q
    ||||||||||||||| |||||||||||||||||| |||||    
T  10484083 ggtgtgcactcataaaatcattttcatgtctctgctttca 10484044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 235
Target Start/End: Complemental strand, 10513970 - 10513915
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttga 235  Q
    ||||||||| |||||||||||||||| ||| |||| ||||| ||||| ||||||||    
T  10513970 tggtgtgcagtcataagatcattttcctgtttctgctttcatttattgcattttga 10513915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 10539635 - 10539564
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtg 251  Q
    ||||||||||||  ||||||||||||||||||||| ||||| |||||   |||| |||| ||| ||||||||    
T  10539635 tggtgtgcactctgaagatcattttcatgtctctgctttcatttattttgtttttagaccagtgattttgtg 10539564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 102 - 156
Target Start/End: Complemental strand, 10483849 - 10483795
Alignment:
Q  102 aaattctaattttagcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    |||||||||||||||||| ||||  ||||| |||||||||||  |||||||||||    
T  10483849 aaattctaattttagcttttacttctttaatgaggcatgaaacttgattgaaaac 10483795  T

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Target: chr2; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 180 - 250
Target Start/End: Complemental strand, 10502936 - 10502866
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgt 250  Q
    |||||||||||| ||||||||| ||||||| | || ||||| ||||| |||||||| ||| || |||||||    
T  10502936 tggtgtgcactcgtaagatcatcttcatgtttgtgctttcatttattgcattttgatactcgtgattttgt 10502866  T

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Target: chr2; HSP #57
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 209 - 242
Target Start/End: Original strand, 7468286 - 7468319
Alignment:
Q  209 tctctgttttcacttattccattttgagactagt 242  Q
    |||||||||||||||||| |||||||||||||||    
T  7468286 tctctgttttcacttattgcattttgagactagt 7468319  T

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Target: chr2; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 184 - 213
Target Start/End: Original strand, 9082021 - 9082050
Alignment:
Q  184 gtgcactcataagatcattttcatgtctct 213  Q
    ||||||||||||||||||||||||||||||    
T  9082021 gtgcactcataagatcattttcatgtctct 9082050  T

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Target: chr2; HSP #59
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 10540292 - 10540235
Alignment:
Q  99 tttaaattctaattttagcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    |||| ||||||| |||| ||| |||||||||| ||||||| | |||||||||||||||    
T  10540292 tttagattctaactttatcttttactagtttatcgaggcacggaaaatgattgaaaac 10540235  T

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Target: chr2; HSP #60
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 180 - 254
Target Start/End: Complemental strand, 10540516 - 10540438
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttga----gactagtaattttgtgact 254  Q
    ||||||||||||| | | ||||||||||||||||| ||||| |||||  ||||| |    |||||||||||||||||||    
T  10540516 tggtgtgcactcacatgctcattttcatgtctctgctttcatttattgaattttcagactgactagtaattttgtgact 10540438  T

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Target: chr2; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 67 - 111
Target Start/End: Complemental strand, 10458108 - 10458064
Alignment:
Q  67 aacttttgtattatttttctgccatctctctttttaaattctaat 111  Q
    ||||||||||| ||| |||||| || |||||||||||||||||||    
T  10458108 aacttttgtataattgttctgcaatatctctttttaaattctaat 10458064  T

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Target: chr2; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 180 - 251
Target Start/End: Complemental strand, 10467984 - 10467912
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccat-tttgagactagtaattttgtg 251  Q
    |||||||||||| ||||||||||||| |||| |||  |||| ||||| ||| |||||||||||| ||| ||||    
T  10467984 tggtgtgcactcttaagatcattttcctgtcactgccttcatttattgcatatttgagactagtgattctgtg 10467912  T

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Target: chr2; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 30 - 86
Target Start/End: Complemental strand, 10540347 - 10540292
Alignment:
Q  30 tttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttct 86  Q
    |||||||||| ||||||||| |||| |||||||| ||||||||||||| ||| ||||    
T  10540347 tttgtggatcttcccattaa-tcaattgtctttgcagaacttttgtataattattct 10540292  T

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Target: chr1 (Bit Score: 51; Significance: 3e-20; HSPs: 5)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 51; E-Value: 3e-20
Query Start/End: Original strand, 180 - 254
Target Start/End: Original strand, 24050299 - 24050373
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgtgact 254  Q
    |||||||||||||||||||||||| ||| |||||| ||||||||||| ||||||||||||||| ||| |||||||    
T  24050299 tggtgtgcactcataagatcatttacatttctctgctttcacttattgcattttgagactagtgattgtgtgact 24050373  T

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Target: chr1; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 18488878 - 18488783
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaa 110  Q
    |||||||||||| | ||| | |||| ||| |||| ||| |||||||||||||| ||||||||| ||| |||  |||| |||||||||||| |||||    
T  18488878 agattttcatcatgatttttagatcttcctattagatcgaatgtctttggagagcttttgtataattgttcgaccatatctctttttaaaatctaa 18488783  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 180 - 250
Target Start/End: Original strand, 24050003 - 24050073
Alignment:
Q  180 tggtgtgcactcataagatcattttcatgtctctgttttcacttattccattttgagactagtaattttgt 250  Q
    ||||||||||||||| ||| ||||||||||||||| ||||| ||||| ||||||  |||| || |||||||    
T  24050003 tggtgtgcactcataggataattttcatgtctctgctttcatttattgcattttatgacttgtgattttgt 24050073  T

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Target: chr1; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 30 - 111
Target Start/End: Original strand, 24050461 - 24050543
Alignment:
Q  30 tttgtggatcctcccattaaa-tcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaat 111  Q
    |||||||||| ||| |||||| |  |||||||||||||||||||| |||  || |||||| || |||||||||||||||||||    
T  24050461 tttgtggatcttcctattaaactggaatgtctttggagaacttttctatagttgttctgcaatatctctttttaaattctaat 24050543  T

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Target: chr1; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 156
Target Start/End: Original strand, 24049948 - 24049993
Alignment:
Q  111 ttttagcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    ||||||||| ||| ||||||| ||||||||||||||||||||||||    
T  24049948 ttttagcttttaccagtttaatgaggcatgaaaaatgattgaaaac 24049993  T

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Target: chr7 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 60 - 156
Target Start/End: Original strand, 8670754 - 8670848
Alignment:
Q  60 tttggagaacttttgtattatttttctgccatctctctttttaaattctaattttagcttatactagtttaacgaggcatgaaaaatgattgaaaac 156  Q
    |||||||||| ||||||| ||| ||||||||| |||||||  |||||||||||||||||| |||| |||||| ||||||||||| | ||||||||||    
T  8670754 tttggagaacatttgtataattgttctgccatatctcttt--aaattctaattttagcttttacttgtttaatgaggcatgaaacacgattgaaaac 8670848  T

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Target: chr4 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 1)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 110
Target Start/End: Complemental strand, 17733403 - 17733308
Alignment:
Q  15 agattttcatcaagttttgtggatcctcccattaaatcaaatgtctttggagaacttttgtattatttttctgccatctctctttttaaattctaa 110  Q
    |||||||||||| | ||| |||||| ||| |||||||| |||||||||||||| ||||||| | ||| |||  |||| |||||||||||| |||||    
T  17733403 agattttcatcatgatttttggatcttcctattaaatcgaatgtctttggagagcttttgtgtaattgttcgaccatatctctttttaaaatctaa 17733308  T

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