View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20854_high_5 (Length: 345)
Name: NF20854_high_5
Description: NF20854
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20854_high_5 |
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Alignment Details
Target: chr7 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 48 - 316
Target Start/End: Original strand, 22071554 - 22071822
Alignment:
| Q |
48 |
cgagcagaacctgtgctttggtgcaaaaacaaacactgatgaaatggaggtttggaaatgattttccattaaaagagagattcttgatggtaatgggtta |
147 |
Q |
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| T |
22071554 |
cgagctgaagctatgctttggtgcaaaaacaaacactgatgaaatggaggtttggaaatgattttccattaaaagagagattcttgatggtaatgggtta |
22071653 |
T |
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| Q |
148 |
gaaggagggcttccaaatcaacaacatgttaatgtttattttcatcagtcgaaaatgatgtggtttcggcttctgttaaaaaggttgtgttcttgacagt |
247 |
Q |
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| T |
22071654 |
gaaggagggcttccaaatcaacaacatgttaatgtttattttcatcagtcgaaaatgatgtggtttcggcttcttttaaaaaggttgtgttcttgacagt |
22071753 |
T |
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| Q |
248 |
ataccatcttttagttccattcactttcaagctcttagaaacactatatggttgcaacttgaaagcact |
316 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
22071754 |
ataccatcttttagttccattcactttcaagctcttagaaacactatatggttgcaatttgaaagcact |
22071822 |
T |
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