View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF2085R-Insertion-6 (Length: 320)
Name: NF2085R-Insertion-6
Description: NF2085R
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF2085R-Insertion-6 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 305; Significance: 1e-172; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 305; E-Value: 1e-172
Query Start/End: Original strand, 8 - 320
Target Start/End: Original strand, 38372193 - 38372505
Alignment:
| Q |
8 |
agttgtagtatccaacttactagtatatttttattacaagcacgtttctcaggttgaagcatggtagaaagactactaaaatagtcttgaaagtttccaa |
107 |
Q |
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| T |
38372193 |
agttgtagtatccaacttactagtatatttttattacaagcacgtttctcaggttgaagcatggtagaaagactactaaaatagtcttgaaagtttccaa |
38372292 |
T |
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| Q |
108 |
aaacctgccatgcaatgcaaattaaatgatgattccgttattcgtttatgcaactaccgacaaaaggtgttcctaaggtcaatttaagacatgaaaaatc |
207 |
Q |
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| T |
38372293 |
aaacctgccatgcaatgcaaattaaatgatgattccgttattcgtttatgcaactaccgacaaaaggtgttcctaaggtcaatttaagacatgaaaaatc |
38372392 |
T |
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| Q |
208 |
aatcttatttacatggtattgttgacattttcagtggcaggaaaggaaatttattacataaaagaatagaccatgtattctccccaagctttgaataagt |
307 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||| |
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| T |
38372393 |
aatcttatttacatggtattgttgacattttcagtggcaggaaaggaaatttatgacataaaagaatagaccatgaattctccccaagctttgaataagt |
38372492 |
T |
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| Q |
308 |
agtactagttcct |
320 |
Q |
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||||||||||||| |
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| T |
38372493 |
agtactagttcct |
38372505 |
T |
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