View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF2085_1D_low_48 (Length: 223)

Name: NF2085_1D_low_48
Description: NF2085_1D
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF2085_1D_low_48
NF2085_1D_low_48
[»] chr4 (7 HSPs)
chr4 (2-216)||(40813846-40814060)
chr4 (25-187)||(17416597-17416759)
chr4 (23-157)||(1799006-1799141)
chr4 (2-197)||(37707420-37707612)
chr4 (23-190)||(26500361-26500532)
chr4 (3-142)||(10388436-10388576)
chr4 (63-157)||(23040629-23040724)
[»] chr3 (6 HSPs)
chr3 (2-172)||(2782134-2782305)
chr3 (23-190)||(16284895-16285061)
chr3 (23-172)||(45181439-45181589)
chr3 (2-109)||(3968615-3968722)
chr3 (2-109)||(4000083-4000190)
chr3 (23-173)||(17324243-17324394)
[»] chr2 (8 HSPs)
chr2 (15-214)||(9560866-9561064)
chr2 (24-190)||(42048303-42048469)
chr2 (3-173)||(37128989-37129160)
chr2 (26-190)||(4397519-4397681)
chr2 (23-78)||(41958173-41958228)
chr2 (24-90)||(44888406-44888470)
chr2 (2-80)||(4162085-4162162)
chr2 (117-173)||(23665539-23665595)
[»] chr7 (6 HSPs)
chr7 (2-216)||(27993601-27993814)
chr7 (2-216)||(46262184-46262395)
chr7 (58-169)||(25153079-25153190)
chr7 (2-171)||(35206758-35206925)
chr7 (2-157)||(2570020-2570176)
chr7 (129-205)||(24931767-24931842)
[»] chr5 (7 HSPs)
chr5 (34-190)||(29685655-29685810)
chr5 (3-216)||(18557342-18557552)
chr5 (23-173)||(35846941-35847092)
chr5 (3-109)||(2706970-2707076)
chr5 (3-142)||(42742401-42742541)
chr5 (2-109)||(25341607-25341714)
chr5 (23-124)||(3204173-3204279)
[»] chr6 (2 HSPs)
chr6 (24-216)||(12129023-12129212)
chr6 (2-204)||(7546494-7546692)
[»] chr1 (6 HSPs)
chr1 (23-173)||(38709797-38709948)
chr1 (2-109)||(13987530-13987637)
chr1 (3-157)||(38564766-38564916)
chr1 (27-164)||(4391460-4391598)
chr1 (27-131)||(39908911-39909016)
chr1 (16-89)||(28887701-28887774)
[»] chr8 (6 HSPs)
chr8 (2-168)||(31179893-31180057)
chr8 (23-173)||(38387762-38387913)
chr8 (3-173)||(46292-46464)
chr8 (23-102)||(36796520-36796600)
chr8 (3-77)||(1579079-1579153)
chr8 (15-76)||(40531176-40531237)


Alignment Details
Target: chr4 (Bit Score: 179; Significance: 9e-97; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 179; E-Value: 9e-97
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 40813846 - 40814060
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  40813846 cagactcccgacgcaaatcataaaggcacccttcaattcacgaaccactagagcagacaccttaacctatccaaaaactcggcccaccataaaccagatg 40813945  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaagc 201  Q
    |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||||||| |||||||||     
T  40813946 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaacgaaccagctcgaatataaacaaaccaaaaacaagtcataaaatcaaccaccacaagt 40814045  T
Q  202 accgtcacgaacacc 216  Q
    ||| ||| |||||||    
T  40814046 accatcatgaacacc 40814060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 25 - 187
Target Start/End: Original strand, 17416597 - 17416759
Alignment:
Q  25 aggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgccaaatt-cgaaggcagagaaaa 123  Q
    |||||||| ||||||||||||||||||||| |||||| ||||||| |||||||||||||||||| |||||||| |||||||||| | ||| |||||||||    
T  17416597 aggcacccctcaactcacgaaccactagagtagacaccttaacctgtccaaaaactcggcccacaataaaccaaatgccaaattcctaagacagagaaaa 17416696  T
Q  124 ggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaat 187  Q
    |||| |||| |||||||||  ||||||||||||| | ||||||| | |||||||| ||||||||    
T  17416697 ggtgaaacaatagcgcaaagcgaaccagctcgaacacaaacaaatc-aaaacaagccacaaaat 17416759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 23 - 157
Target Start/End: Complemental strand, 1799141 - 1799006
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaa 121  Q
    |||||||||| ||||||||||||||||  |||||||||| |||||||||||||||||||| |||||||  |||| |||||| |||| | ||| |||||||    
T  1799141 aaaggcacccctcaactcacgaaccaccggagcagacaccttaacctatccaaaaactcgacccaccaataacccgatgccaaaatccaaagacagagaa 1799042  T
Q  122 aaggtggaacagtagcgcaaaatgaaccagctcgaa 157  Q
    ||||  ||||| ||||||||| ||||||||||||||    
T  1799041 aaggcagaacaatagcgcaaagtgaaccagctcgaa 1799006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 2 - 197
Target Start/End: Original strand, 37707420 - 37707612
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||||| || || | || |||||||||| |||||||||||||||| |||||||||||   || ||||||||||||||| ||||||| ||||||||||    
T  37707420 cagactcccgacacatagcaaaaaggcacccctcaactcacgaaccaccagagcagacaccaaaatctatccaaaaactcgacccaccaaaaaccagatg 37707519  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccac 197  Q
    ||||  || |||  | ||| | ||||||| |||||  ||||  || |||||||||| | ||||||| | ||| |||| ||||||||||| ||||||    
T  37707520 ccaagctcaaag--acagacacggtggaatagtagtacaaatcgatccagctcgaacagaaacaaatc-aaaccaagccacaaaatcaaccaccac 37707612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 23 - 190
Target Start/End: Original strand, 26500361 - 26500532
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaa--ctcggcccac--cataaaccagatgccaaa-ttcgaaggcag 117  Q
    |||||||||| ||||||||||||||||||||||| |||| ||||||| ||||||||  |||| |||||  ||  |||| ||||||||| ||| ||| |||    
T  26500361 aaaggcacccctcaactcacgaaccactagagcatacaccttaacctgtccaaaaaaactcgacccacaccaataacctgatgccaaaattcaaagacag 26500460  T
Q  118 agaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaa 190  Q
    |||||||| ||||||  ||| ||||  ||| ||||||||| | ||||||| | |||||||| ||| |||||||    
T  26500461 agaaaaggcggaacaaaagcacaaagcgaatcagctcgaacaaaaacaaatc-aaaacaagccaccaaatcaa 26500532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 3 - 142
Target Start/End: Complemental strand, 10388576 - 10388436
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgc 102  Q
    |||||| | |||||| ||| |||| || || |||||||||||| ||||||||||||||| || || | ||| |||||| | |||| ||  |||| |||||    
T  10388576 agactctcgacgcaagtcaaaaagacatccctcaactcacgaagcactagagcagacacctttacatgtcccaaaacttgacccatcaataacccgatgc 10388477  T
Q  103 c-aaattcgaaggcagagaaaaggtggaacagtagcgcaaa 142  Q
    | |||| | |||  |||||||||| ||||||||||||||||    
T  10388476 caaaatccaaagagagagaaaaggcggaacagtagcgcaaa 10388436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 63 - 157
Target Start/End: Original strand, 23040629 - 23040724
Alignment:
Q  63 ttaacctatccaaaaactcggcccaccataaaccagatgccaaattcga-aggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaa 157  Q
    ||||||| || ||||||||| ||| ||| ||| | ||||||||| || | || ||||||||||  ||||||||||||||||  |||||||||||||    
T  23040629 ttaacctgtctaaaaactcgaccctccaaaaatccgatgccaaaatccatagacagagaaaagacggaacagtagcgcaaagcgaaccagctcgaa 23040724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 84; Significance: 4e-40; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 2 - 172
Target Start/End: Original strand, 2782134 - 2782305
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||| | || |||||||| ||||||||| ||||||||| |||||| ||||||||||| ||||||| ||||||||||||||||||||| | | |||||    
T  2782134 cagactctcgacacaaatcattaaggcacccctcaactcacaaaccaccagagcagacaccttaacctgtccaaaaactcggcccaccattatctagatg 2782233  T
Q  102 ccaaattcg-aaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaa 172  Q
    ||||||||| ||| || |||||||||||||||  ||||||||  ||||||||||||  ||||||||||||||    
T  2782234 ccaaattcgtaagccaaagaaaaggtggaacaacagcgcaaatcgaaccagctcgagcataaacaaaccaaa 2782305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 190
Target Start/End: Complemental strand, 16285061 - 16284895
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgccaaattcgaaggcagagaaa 122  Q
    |||||||||| |||||||||||||||| ||||||||||| ||||||| |||||||||||| |||||||  | |  ||||||||| || ||| ||| ||||    
T  16285061 aaaggcacccctcaactcacgaaccacaagagcagacaccttaacctgtccaaaaactcgacccaccaatagctcgatgccaaaatcaaagacagcgaaa 16284962  T
Q  123 aggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaa 190  Q
    ||  | |||||||| ||||| |||||||||||||| | ||||||| | |||||||| ||| |||||||    
T  16284961 agacgaaacagtagtgcaaagtgaaccagctcgaacacaaacaaatc-aaaacaagccaccaaatcaa 16284895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 23 - 172
Target Start/End: Complemental strand, 45181589 - 45181439
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaa 121  Q
    |||||||||| |||||||||||||||| |||||||||||  |||||| |||||||||||| |||||||  ||||  ||||| |||| | ||| |||| ||    
T  45181589 aaaggcacccctcaactcacgaaccaccagagcagacaccctaacctgtccaaaaactcgacccaccaataacccaatgccaaaatccaaagacagaaaa 45181490  T
Q  122 aaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaa 172  Q
    ||||||||| |||||||||||| |||||| |||||| | ||||||| ||||    
T  45181489 aaggtggaatagtagcgcaaaacgaaccaactcgaacacaaacaaaacaaa 45181439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 109
Target Start/End: Original strand, 3968615 - 3968722
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||||| || |||||||| ||||||||| |||||||||||||||| |||||||||||   || ||||| ||||||||||| ||||| ||||||||||    
T  3968615 cagactcccgacacaaatcatcaaggcacccctcaactcacgaaccaccagagcagacaccaaaatctatctaaaaactcggctcaccaaaaaccagatg 3968714  T
Q  102 ccaaattc 109  Q
    ||||||||    
T  3968715 ccaaattc 3968722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 4000190 - 4000083
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||||| || |||||||| ||||||||| |||||||||||||||| |||||||||||   || ||||| ||||||||||| ||||| ||||||||||    
T  4000190 cagactcccgacacaaatcatcaaggcacccctcaactcacgaaccaccagagcagacaccaaaatctatctaaaaactcggctcaccaaaaaccagatg 4000091  T
Q  102 ccaaattc 109  Q
    ||||||||    
T  4000090 ccaaattc 4000083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 23 - 173
Target Start/End: Original strand, 17324243 - 17324394
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg-ccaaattcgaaggcagagaa 121  Q
    |||||||||| ||||||||||||||||  ||| |||||| | |||||||||||||||||| |||||||  |||| |||| | |||| | ||| | | |||    
T  17324243 aaaggcacccctcaactcacgaaccaccggagtagacacctaaacctatccaaaaactcgacccaccaataacccgatgtcaaaatccaaagacggggaa 17324342  T
Q  122 aaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaa 173  Q
    |||| |||| |||||| ||||  ||||||||||||| | ||||||| |||||    
T  17324343 aaggcggaatagtagcacaaagcgaaccagctcgaacacaaacaaatcaaaa 17324394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 80; Significance: 1e-37; HSPs: 8)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 15 - 214
Target Start/End: Original strand, 9560866 - 9561064
Alignment:
Q  15 caaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgccaaattcgaagg 114  Q
    |||||||| ||||||||| ||||||||||||| || |||||||||||  |||| ||||||||||||| |||||||| || | |||||||||||||  | |    
T  9560866 caaatcatcaaggcacccctcaactcacgaactaccagagcagacaccataacttatccaaaaactcagcccaccaaaatctagatgccaaattcataag 9560965  T
Q  115 cagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaagcaccgtcacgaaca 214  Q
     | ||||| | || || | |||||||||  || |||||||||| | |||||||||||||||||| ||||||||||| |||||||||||||| ||||||||    
T  9560966 -acagaaacgatgaaaaaatagcgcaaatcgatccagctcgaacaaaaacaaaccaaaaacaagccacaaaatcaaccaccacaagcaccgccacgaaca 9561064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 24 - 190
Target Start/End: Original strand, 42048303 - 42048469
Alignment:
Q  24 aaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgccaaatt-cgaaggcagagaaa 122  Q
    ||||||||  |||||||||||||||| ||||||||||| ||||| | ||||||||||||||||||||| | ||||| |||||||| | ||| |||||  |    
T  42048303 aaggcacctctcaactcacgaaccaccagagcagacaccttaacatgtccaaaaactcggcccaccattatccagaggccaaattcctaagacagaggga 42048402  T
Q  123 aggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaa 190  Q
    ||||||||||  |  |||||  ||||||||||||| ||||||||||| |||||||| |||||||||||    
T  42048403 aggtggaacaacaatgcaaatcgaaccagctcgaacataaacaaacc-aaaacaagccacaaaatcaa 42048469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 37128989 - 37129160
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg- 101  Q
    ||||||| ||| ||| ||| |||||||||  |||||||||||||||| ||||||||||| | ||||| |||||||||||  || |||| ||| | ||||     
T  37128989 agactcctaacacaagtcaaaaaggcacctatcaactcacgaaccaccagagcagacacctgaacctgtccaaaaactcaaccaaccaaaaatccgatgt 37129088  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaa 173  Q
    | |||| | ||| |||| |||||| ||||||||||||| ||| ||||||||||||| | ||||||| |||||    
T  37129089 caaaatccaaagacagaaaaaaggcggaacagtagcgccaaacgaaccagctcgaacacaaacaaatcaaaa 37129160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 26 - 190
Target Start/End: Original strand, 4397519 - 4397681
Alignment:
Q  26 ggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaaaag 124  Q
    ||||||| |||||||||||||||| | ||||||||||| ||| | |||||||||||| |||||||  |||   ||||| |||| | ||| ||||| ||||    
T  4397519 ggcacccctcaactcacgaaccaccatagcagacacataaacttgtccaaaaactcgacccaccaataactctatgccaaaatccaaagacagag-aaag 4397617  T
Q  125 gtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaa 190  Q
    | ||||||||||||||||  ||| ||||||||| | ||||||| | |||||||| ||| |||||||    
T  4397618 gcggaacagtagcgcaaagcgaa-cagctcgaacacaaacaaatc-aaaacaagccaccaaatcaa 4397681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 23 - 78
Target Start/End: Complemental strand, 41958228 - 41958173
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaa 78  Q
    |||||||||||||||||||| |||||| ||||||||||| ||||||| ||||||||    
T  41958228 aaaggcacccttcaactcacaaaccaccagagcagacaccttaacctgtccaaaaa 41958173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 24 - 90
Target Start/End: Original strand, 44888406 - 44888470
Alignment:
Q  24 aaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccacca 90  Q
    ||||||||| ||||||||||| |||| ||||||||||| | ||||| |||  |||||||||||||||    
T  44888406 aaggcacccctcaactcacgacccaccagagcagacacgtaaacctgtcc--aaactcggcccacca 44888470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 80
Target Start/End: Original strand, 4162085 - 4162162
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaact 80  Q
    |||||||||||| |||||||  | ||||||| ||||||| |||||||| |||||| |||| | ||||||||||| ||||    
T  4162085 cagactcccaacacaaatcacta-ggcacccctcaactctcgaaccaccagagcatacacctcaacctatccaacaact 4162162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 117 - 173
Target Start/End: Original strand, 23665539 - 23665595
Alignment:
Q  117 gagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaa 173  Q
    ||||||||||||||||  ||||||||   ||||| |||||| |||||||||||||||    
T  23665539 gagaaaaggtggaacaacagcgcaaatcaaaccaactcgaacataaacaaaccaaaa 23665595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 76; Significance: 3e-35; HSPs: 6)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 76; E-Value: 3e-35
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 27993601 - 27993814
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||||| || |||||||||||| ||||| |||||||||||||||| |||||| ||||  |||||||||||||||||||||||||||||| |||||||    
T  27993601 cagactcccgacacaaatcataaagacacccctcaactcacgaaccaccagagcaaacaccataacctatccaaaaactcggcccaccataatccagatg 27993700  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcg-aatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaag 200  Q
    ||||||||  | | | |||||  |||||| |||||| ||||  || | |||||| || | |  |||||| |||||||| ||||||||||| || ||||||    
T  27993701 ccaaattcacaag-acagaaacagtggaatagtagcacaaatcgatctagctcgaaacagattcaaacc-aaaacaagccacaaaatcaaacatcacaag 27993798  T
Q  201 caccgtcacgaacacc 216  Q
    ||||| ||||||||||    
T  27993799 caccgccacgaacacc 27993814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 2 - 216
Target Start/End: Original strand, 46262184 - 46262395
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    |||||||||||| | ||||| |||||||||| |||||||||||| |||  ||| ||||||  ||| ||||||||||||||||||||||| || |||||||    
T  46262184 cagactcccaacaccaatcaaaaaggcacccctcaactcacgaatcaccggagaagacaccataaactatccaaaaactcggcccaccaaaacccagatg 46262283  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaagc 201  Q
    ||||||| ||    | ||||| |||||||||||||| ||||  || ||||||| || | ||||||||| |||||||  |||| |||||| ||||||||||    
T  46262284 ccaaatt-gataagacagaaacggtggaacagtagctcaaatcgatccagctcaaacaaaaacaaacc-aaaacaa-ccacataatcaaccaccacaagc 46262380  T
Q  202 accgtcacgaacacc 216  Q
    |||| || |||||||    
T  46262381 accgccatgaacacc 46262395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 58 - 169
Target Start/End: Complemental strand, 25153190 - 25153079
Alignment:
Q  58 acacattaacctatccaaaaactcggcccaccataaaccagatgccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaa 157  Q
    |||| ||||||| ||||||||||||| ||||||| |  ||||||||||||||  |  || |||| ||||||||||| | || ||| ||||||||||||||    
T  25153190 acaccttaacctgtccaaaaactcggaccaccattattcagatgccaaattcataaacatagaataggtggaacagcaacgtaaattgaaccagctcgaa 25153091  T
Q  158 tataaacaaacc 169  Q
     |||||||||||    
T  25153090 cataaacaaacc 25153079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 2 - 171
Target Start/End: Original strand, 35206758 - 35206925
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    |||||||||||| ||||| | ||||| |||| |||||||| || |||| ||||||||||| ||||| | |||  ||| |||||||||||  | ||  |||    
T  35206758 cagactcccaacacaaataaaaaagggacccctcaactcatgacccaccagagcagacaccttaacttgtcc--aaattcggcccaccaatatcccaatg 35206855  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaa 171  Q
    ||||| || ||| |||||||||| |||||||  || |||||  || |||||||||| | |||||||||||    
T  35206856 ccaaactcaaagacagagaaaagatggaacaacagtgcaaaccgatccagctcgaacaaaaacaaaccaa 35206925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 2570176 - 2570020
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||||  || ||| ||| |||||||||| ||||||||||| | || |||||| |||| |||| ||  |||||| |||| |||||||  |||| ||||    
T  2570176 cagactcctgacacaagtcaaaaaggcacccctcaactcacgagcaaccagagcaaacaccttaatctgaccaaaacctcgacccaccaataacccgatg 2570077  T
Q  102 cc-aaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaa 157  Q
    || |||| | ||| ||||||||||| ||| ||||||| ||||  |||||||||||||    
T  2570076 ccaaaatccaaagacagagaaaaggcggatcagtagcacaaagcgaaccagctcgaa 2570020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 129 - 205
Target Start/End: Complemental strand, 24931842 - 24931767
Alignment:
Q  129 aacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaagcaccg 205  Q
    |||||||| ||||| ||| |||||||||| | ||||||| ||||| |||| ||||||||||| ||||||||||||||    
T  24931842 aacagtagtgcaaattgatccagctcgaacagaaacaaatcaaaa-caagccacaaaatcaaccaccacaagcaccg 24931767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 67; Significance: 6e-30; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 34 - 190
Target Start/End: Complemental strand, 29685810 - 29685655
Alignment:
Q  34 tcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgccaaattcgaagg-cagagaaaaggtggaaca 132  Q
    |||||||||||||||| ||||||||| | ||||||| | |||||||||  |||||||  ||||| ||||||||||| || | ||||||||||||||||||    
T  29685810 tcaactcacgaaccaccagagcagaccccttaacctgttcaaaaactcaacccaccaataaccatatgccaaattccaaagacagagaaaaggtggaaca 29685711  T
Q  133 gtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaa 190  Q
    ||| |||||| |||||||||||||| | |||||| |  |||||||| |||||||||||    
T  29685710 gtaacgcaaagtgaaccagctcgaacacaaacaatc--aaaacaagccacaaaatcaa 29685655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 3 - 216
Target Start/End: Complemental strand, 18557552 - 18557342
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgc 102  Q
    |||||||| || ||||||| || ||||||| ||||||||||| |||| |||| |||||| |||||||  ||  |||||||||||||||  | ||  ||||    
T  18557552 agactcccgacacaaatcaaaacggcacccctcaactcacgacccaccagagtagacaccttaacctgccc--aaactcggcccaccaatatcccaatgc 18557455  T
Q  103 caaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaagca 202  Q
    |||| |||||| || |||||||||||||||  ||||||||  || |||||||||| |  |||||||| || ||||| |||||| |||| |||||  ||||    
T  18557454 caaactcgaagacaaagaaaaggtggaacaacagcgcaaatcgatccagctcgaacaacaacaaacc-aacacaagccacaaactcaaccaccaatagca 18557356  T
Q  203 ccgtcacgaacacc 216  Q
    ||| | ||||||||    
T  18557355 ccgccccgaacacc 18557342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 35847092 - 35846941
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaa 121  Q
    |||||||||| ||||||||| |||||| ||||||||||| ||||| | |||||||||| | |||||||  |||| |||||| |||| | ||| || ||||    
T  35847092 aaaggcacccatcaactcacaaaccaccagagcagacaccttaacatgtccaaaaacttgacccaccaataacccgatgccaaaatccaaagacaaagaa 35846993  T
Q  122 aaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaa 173  Q
    ||||||||||| ||||  |||  ||||||||||||| | ||||||| |||||    
T  35846992 aaggtggaacaatagcataaagcgaaccagctcgaacacaaacaaatcaaaa 35846941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 3 - 109
Target Start/End: Complemental strand, 2707076 - 2706970
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgc 102  Q
    |||||||| || ||| |||| || |||||| ||||||||||||||||  |||||| ||| ||||||| ||||| |||||||| |||||  ||||||||||    
T  2707076 agactcccgacacaagtcattaaagcacccctcaactcacgaaccaccggagcaggcaccttaacctgtccaagaactcggcacaccaataaccagatgc 2706977  T
Q  103 caaattc 109  Q
    |||||||    
T  2706976 caaattc 2706970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 3 - 142
Target Start/End: Original strand, 42742401 - 42742541
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgc 102  Q
    |||||||| || ||| ||| ||||||||||  |||| |||||||||| ||||||||||| | ||||| | |||||||| | |||||||  |||| |||||    
T  42742401 agactcccgacacaagtcaaaaaggcaccccacaacccacgaaccaccagagcagacacctaaacctgttcaaaaacttgacccaccaataacccgatgc 42742500  T
Q  103 c-aaattcgaaggcagagaaaaggtggaacagtagcgcaaa 142  Q
    | |||| | ||  |||||||||| || ||||||||||||||    
T  42742501 caaaatccaaaaacagagaaaagttgaaacagtagcgcaaa 42742541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 25341714 - 25341607
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||||| || || ||||| ||||||||| | |||||||||| ||| |||||||| || ||||| | || ||||| ||||| | || | | |||||||    
T  25341714 cagactcccgacacacatcatcaaggcacccctgaactcacgaagcaccagagcagaaaccttaacatgtcgaaaaattcggcgcgcctttatccagatg 25341615  T
Q  102 ccaaattc 109  Q
    ||||||||    
T  25341614 ccaaattc 25341607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 23 - 124
Target Start/End: Complemental strand, 3204279 - 3204173
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacac----attaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcag 117  Q
    |||||||||| ||||||||||| |||| |||||| ||||    ||||||||  |||||| |||| |||||||  |||| |||||| |||||| ||| |||    
T  3204279 aaaggcacccctcaactcacgagccaccagagcatacaccttaattaacctgaccaaaacctcgacccaccaataacccgatgccaaaattcaaagacag 3204180  T
Q  118 agaaaag 124  Q
    |||||||    
T  3204179 agaaaag 3204173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 66; Significance: 2e-29; HSPs: 2)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 24 - 216
Target Start/End: Complemental strand, 12129212 - 12129023
Alignment:
Q  24 aaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgccaaattcgaaggcagagaaaa 123  Q
    ||||||||| ||||||||||| |||| |||| |||||| | ||| | ||||||  ||||||||||||| | || |||||||||||||||| | |||||||    
T  12129212 aaggcacccatcaactcacgacccaccagagaagacacctaaacttgtccaaa--ctcggcccaccattatcccgatgccaaattcgaagacggagaaaa 12129115  T
Q  124 ggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaagcaccgtcacgaacacc 216  Q
    ||||||||||| |||||||   |||||||||||| | ||||||| | |||||||| |||||  |||| |||||||||||| | | ||||||||    
T  12129114 ggtggaacagtggcgcaaatcaaaccagctcgaacaaaaacaaatc-aaaacaagccacaagctcaaccaccacaagcactgccccgaacacc 12129023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 2 - 204
Target Start/End: Original strand, 7546494 - 7546692
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    ||||||| |||| | ||| | |||||||||| |||||||||||||||| |||||||||||  ||||||||||||||||||| |||| || || ||| |||    
T  7546494 cagactctcaacaccaataaaaaaggcacccctcaactcacgaaccaccagagcagacaccataacctatccaaaaactcgaccca-caaaacccatatg 7546592  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaaacaagtcacaaaatcaatcaccacaagc 201  Q
    ||||||||  | | | ||||| ||||||||| |||||||||  || ||||||| || | |||||||||||||   || |||| |||||| ||||||||||    
T  7546593 ccaaattcataag-acagaaacggtggaacaatagcgcaaatcgatccagctcaaacagaaacaaaccaaaa--cagccacataatcaaccaccacaagc 7546689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 64; Significance: 4e-28; HSPs: 6)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 38709948 - 38709797
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaa 121  Q
    |||||||||| |||||||||||||||| ||| || |||| ||||||| |||||||||||| |||||||  |||| |||||| |||||| ||| |||||||    
T  38709948 aaaggcacccctcaactcacgaaccaccagaacaaacaccttaacctgtccaaaaactcgacccaccaataacccgatgccaaaattcaaagacagagaa 38709849  T
Q  122 aaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaa 173  Q
    |||| ||||||||||||||||   ||||||||| || | ||||||| |||||    
T  38709848 aaggcggaacagtagcgcaaagcaaaccagctcaaacacaaacaaatcaaaa 38709797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 2 - 109
Target Start/End: Complemental strand, 13987637 - 13987530
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    |||| |||| || |||||||| ||||||||| |||||||||||||||| |||||||||||   |||||||| ||||||||||| ||||| ||||| ||||    
T  13987637 cagattcccgacacaaatcatcaaggcacccctcaactcacgaaccaccagagcagacaccaaaacctatctaaaaactcggctcaccaaaaacctgatg 13987538  T
Q  102 ccaaattc 109  Q
    ||||||||    
T  13987537 ccaaattc 13987530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 3 - 157
Target Start/End: Complemental strand, 38564916 - 38564766
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgc 102  Q
    ||||||| ||| ||||||| |||||||||| ||||||||||| |||   ||||| |||| | ||||| ||||||  |||| ||||||| || || |||||    
T  38564916 agactcctaacacaaatca-aaaggcacccctcaactcacgacccatctgagcaaacacctaaacctgtccaaa--ctcg-cccaccaaaatcctgatgc 38564821  T
Q  103 caaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaa 157  Q
    ||||||||||| | ||||| |||||||| || ||| ||||| |||||||||||||    
T  38564820 caaattcgaagacggagaacaggtggaatagcagcacaaaacgaaccagctcgaa 38564766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 27 - 164
Target Start/End: Complemental strand, 4391598 - 4391460
Alignment:
Q  27 gcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaaaagg 125  Q
    |||||| |||||||||||||||| ||| ||||||| |||||||  |||||| |||| |||||||  |||| |||||| |||| | ||| |||||||||||    
T  4391598 gcacccctcaactcacgaaccaccagaacagacaccttaacctgaccaaaacctcgacccaccaagaacccgatgccaaaatccaaagacagagaaaagg 4391499  T
Q  126 tggaacagtagcgcaaaatgaaccagctcgaatataaac 164  Q
     |||| |||||| ||||   ||||| |||||| ||||||    
T  4391498 cggaatagtagcacaaagcaaaccatctcgaacataaac 4391460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 27 - 131
Target Start/End: Original strand, 39908911 - 39909016
Alignment:
Q  27 gcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatgcc-aaattcgaaggcagagaaaagg 125  Q
    |||||| |||||||||||||||| |||||| |||| | ||||| ||||||||||||  ||||||  |||| |||||| |||| | ||| |||||||||||    
T  39908911 gcacccctcaactcacgaaccaccagagcatacacctaaacctgtccaaaaactcgatccaccaataacccgatgccaaaatccaaagacagagaaaagg 39909010  T
Q  126 tggaac 131  Q
    ||||||    
T  39909011 tggaac 39909016  T

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Target: chr1; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 89
Target Start/End: Complemental strand, 28887774 - 28887701
Alignment:
Q  16 aaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccacc 89  Q
    ||||| ||||||||||| |||||||| ||||||| ||||||||  | ||||| |||||||||||| ||||||||    
T  28887774 aaatcctaaaggcacccctcaactcaagaaccaccagagcagatcccttaacttatccaaaaacttggcccacc 28887701  T

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Target: chr8 (Bit Score: 59; Significance: 4e-25; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 2 - 168
Target Start/End: Original strand, 31179893 - 31180057
Alignment:
Q  2 cagactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    |||| ||||||| |||||||| ||||||||||| |||||| ||||||||||||||||||| | |||||  | |||||||||||||||||| | ||| |||    
T  31179893 cagattcccaacacaaatcattaaggcaccctt-aactcatgaaccactagagcagacacct-aacctgcctaaaaactcggcccaccattatccaaatg 31179990  T
Q  102 ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaac 168  Q
    ||  |||| ||||||||||||||||||| || ||||| |||  ||| ||||| ||| | ||||||||    
T  31179991 ccttattcaaaggcagagaaaaggtggagcaatagcgaaaatcgaaacagcttgaacacaaacaaac 31180057  T

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Target: chr8; HSP #2
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 23 - 173
Target Start/End: Complemental strand, 38387913 - 38387762
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaaactcggcccaccataaaccagat-gccaaattcgaaggcagagaa 121  Q
    |||||||||| |||||||||||||||| |||||| |||| ||||||| |||||||||||| |||||||  |||| ||| || |||| | |||  ||||||    
T  38387913 aaaggcacccctcaactcacgaaccaccagagcaaacaccttaacctgtccaaaaactcgacccaccaataacctgatggcaaaatccaaagatagagaa 38387814  T
Q  122 aaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaa 173  Q
    || | |||||| ||| |||||  ||||||||||||| | ||||||| |||||    
T  38387813 aatggggaacaatagtgcaaagcgaaccagctcgaacacaaacaaaacaaaa 38387762  T

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Target: chr8; HSP #3
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 3 - 173
Target Start/End: Original strand, 46292 - 46464
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaacc-actagagcagacacattaacctatccaaaaactcggcccaccataaaccagatg 101  Q
    |||||||| || ||| ||| |||||||||| |||||||||||||| ||  |||||||||||| ||||| |||||||||||| |||||||  |||| ||||    
T  46292 agactcccgacacaagtcaaaaaggcacccctcaactcacgaacccaccggagcagacacataaacctgtccaaaaactcgacccaccaataacccgatg 46391  T
Q  102 -ccaaattcgaaggcagagaaaaggtggaacagtagcgcaaaatgaaccagctcgaatataaacaaaccaaaa 173  Q
     | |||| | ||| || |||| ||| ||||||||||| ||||  ||||| ||||||| | ||||||| |||||    
T  46392 tcaaaatccaaagacaaagaataggcggaacagtagcacaaagcgaaccggctcgaacacaaacaaatcaaaa 46464  T

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Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 23 - 102
Target Start/End: Complemental strand, 36796600 - 36796520
Alignment:
Q  23 aaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaa-actcggcccaccataaaccagatgc 102  Q
    |||||||| | |||||||||||||||| | || ||||||  ||| |||||||||| || ||||||||||||||||||||||    
T  36796600 aaaggcactcctcaactcacgaaccaccaaagtagacaccataatctatccaaaacacacggcccaccataaaccagatgc 36796520  T

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Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 3 - 77
Target Start/End: Complemental strand, 1579153 - 1579079
Alignment:
Q  3 agactcccaacgcaaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaaa 77  Q
    ||||||||||| ||| | | | ||||| || |||||||||||||||| ||||||||||| | |||||||||||||    
T  1579153 agactcccaacacaagtaaaagaggcatccctcaactcacgaaccaccagagcagacacctaaacctatccaaaa 1579079  T

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Target: chr8; HSP #6
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 76
Target Start/End: Complemental strand, 40531237 - 40531176
Alignment:
Q  15 caaatcataaaggcacccttcaactcacgaaccactagagcagacacattaacctatccaaa 76  Q
    ||||||| || ||||||| |||||||| || |||| ||||||||||| ||||||| ||||||    
T  40531237 caaatcaaaacggcacccctcaactcaagacccaccagagcagacaccttaacctgtccaaa 40531176  T

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