View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20866_high_5 (Length: 284)

Name: NF20866_high_5
Description: NF20866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20866_high_5
NF20866_high_5
[»] chr5 (47 HSPs)
chr5 (37-124)||(40324990-40325077)
chr5 (124-284)||(40324777-40324931)
chr5 (18-61)||(31198709-31198752)
chr5 (15-62)||(40056605-40056652)
chr5 (18-61)||(11647197-11647240)
chr5 (18-61)||(22498942-22498985)
chr5 (18-61)||(31545871-31545914)
chr5 (18-56)||(43108574-43108612)
chr5 (18-55)||(20258551-20258588)
chr5 (15-55)||(2642778-2642818)
chr5 (18-62)||(11720893-11720937)
chr5 (1-61)||(30893933-30893993)
chr5 (21-61)||(34702490-34702530)
chr5 (18-62)||(38495141-38495185)
chr5 (18-61)||(3671218-3671261)
chr5 (18-61)||(5107263-5107306)
chr5 (18-61)||(6898021-6898064)
chr5 (18-61)||(8545007-8545050)
chr5 (18-61)||(11844456-11844499)
chr5 (18-61)||(13906702-13906745)
chr5 (18-61)||(16133083-16133126)
chr5 (18-61)||(17046334-17046377)
chr5 (18-61)||(27679498-27679541)
chr5 (18-61)||(33654748-33654791)
chr5 (18-61)||(36321512-36321555)
chr5 (18-61)||(36623192-36623235)
chr5 (18-61)||(39914901-39914944)
chr5 (18-61)||(41650957-41651000)
chr5 (15-61)||(5485186-5485232)
chr5 (18-56)||(5846034-5846072)
chr5 (18-56)||(19068457-19068495)
chr5 (21-55)||(21308975-21309009)
chr5 (21-55)||(21316888-21316922)
chr5 (21-62)||(9123866-9123907)
chr5 (18-51)||(11017186-11017219)
chr5 (18-55)||(12672259-12672296)
chr5 (18-55)||(18278277-18278314)
chr5 (21-62)||(27651551-27651592)
chr5 (18-55)||(34206233-34206270)
chr5 (18-55)||(40445989-40446026)
chr5 (18-62)||(1745978-1746022)
chr5 (18-54)||(3389169-3389205)
chr5 (21-61)||(5614765-5614805)
chr5 (18-50)||(16531293-16531325)
chr5 (18-50)||(16752520-16752552)
chr5 (13-61)||(20211280-20211328)
chr5 (21-61)||(23118072-23118112)
[»] chr4 (42 HSPs)
chr4 (10-62)||(38416056-38416108)
chr4 (18-62)||(19908691-19908735)
chr4 (18-61)||(29908056-29908099)
chr4 (18-61)||(54151643-54151686)
chr4 (18-51)||(8027415-8027448)
chr4 (18-55)||(20096288-20096325)
chr4 (21-62)||(30135139-30135180)
chr4 (18-55)||(56204953-56204990)
chr4 (21-61)||(39842033-39842073)
chr4 (1-61)||(43034343-43034403)
chr4 (18-62)||(50442765-50442809)
chr4 (18-61)||(5360298-5360341)
chr4 (18-61)||(6520071-6520114)
chr4 (18-61)||(7230280-7230323)
chr4 (22-61)||(24488422-24488461)
chr4 (18-61)||(42845025-42845068)
chr4 (18-57)||(56551610-56551649)
chr4 (19-61)||(5179907-5179949)
chr4 (18-56)||(21318271-21318309)
chr4 (18-56)||(22279538-22279576)
chr4 (18-56)||(33900742-33900780)
chr4 (21-55)||(34595957-34595991)
chr4 (18-56)||(44689497-44689535)
chr4 (18-56)||(46409499-46409537)
chr4 (18-56)||(46676516-46676554)
chr4 (18-56)||(49949339-49949377)
chr4 (21-66)||(8464096-8464141)
chr4 (18-51)||(12058329-12058362)
chr4 (18-51)||(14577525-14577558)
chr4 (18-63)||(20383486-20383531)
chr4 (10-51)||(21052567-21052608)
chr4 (18-55)||(30380536-30380573)
chr4 (18-51)||(34247450-34247483)
chr4 (21-62)||(34968341-34968382)
chr4 (18-51)||(53190305-53190338)
chr4 (18-55)||(55430602-55430639)
chr4 (18-62)||(6087746-6087790)
chr4 (18-62)||(16743302-16743346)
chr4 (18-62)||(19854564-19854608)
chr4 (22-62)||(20131426-20131466)
chr4 (18-62)||(31780744-31780788)
chr4 (18-62)||(42756124-42756168)
[»] chr1 (64 HSPs)
chr1 (18-61)||(47719125-47719168)
chr1 (10-56)||(18056726-18056772)
chr1 (18-55)||(24631845-24631882)
chr1 (18-62)||(28039878-28039922)
chr1 (18-61)||(29800533-29800576)
chr1 (18-61)||(49875617-49875660)
chr1 (18-56)||(1408440-1408478)
chr1 (18-51)||(9872123-9872156)
chr1 (18-55)||(19396209-19396246)
chr1 (18-55)||(40618916-40618953)
chr1 (19-56)||(41972749-41972786)
chr1 (18-63)||(43843889-43843934)
chr1 (15-55)||(29935989-29936029)
chr1 (18-62)||(51067912-51067956)
chr1 (18-61)||(2889944-2889987)
chr1 (18-61)||(8266204-8266247)
chr1 (18-61)||(9639835-9639878)
chr1 (18-61)||(10843339-10843382)
chr1 (18-61)||(12212295-12212338)
chr1 (18-61)||(13794526-13794569)
chr1 (18-61)||(17283951-17283994)
chr1 (18-61)||(26256107-26256150)
chr1 (21-60)||(30248055-30248094)
chr1 (21-56)||(31092666-31092701)
chr1 (18-61)||(34733400-34733443)
chr1 (18-61)||(35473952-35473995)
chr1 (18-61)||(38448884-38448927)
chr1 (18-61)||(52267764-52267807)
chr1 (1-55)||(3431336-3431390)
chr1 (15-61)||(6809814-6809860)
chr1 (19-61)||(10356202-10356244)
chr1 (21-55)||(12852223-12852257)
chr1 (18-56)||(30548109-30548147)
chr1 (18-56)||(31061921-31061959)
chr1 (1-55)||(49868017-49868071)
chr1 (18-56)||(50263385-50263423)
chr1 (18-56)||(50638934-50638972)
chr1 (18-55)||(6000161-6000198)
chr1 (18-55)||(7574136-7574173)
chr1 (24-61)||(10489803-10489840)
chr1 (23-56)||(13135778-13135811)
chr1 (18-55)||(25365014-25365051)
chr1 (18-55)||(29987130-29987167)
chr1 (21-62)||(33153901-33153942)
chr1 (21-62)||(41926821-41926862)
chr1 (18-51)||(42416813-42416846)
chr1 (18-47)||(45418081-45418110)
chr1 (18-51)||(51370583-51370616)
chr1 (15-55)||(5279385-5279425)
chr1 (21-61)||(6094422-6094462)
chr1 (18-62)||(8253738-8253782)
chr1 (18-54)||(9427427-9427463)
chr1 (18-50)||(10132462-10132494)
chr1 (21-61)||(10480714-10480754)
chr1 (22-62)||(15764031-15764071)
chr1 (18-62)||(28832189-28832233)
chr1 (21-61)||(30678834-30678874)
chr1 (18-62)||(34032370-34032414)
chr1 (18-62)||(34808581-34808625)
chr1 (21-61)||(37944151-37944191)
chr1 (18-54)||(48264489-48264525)
chr1 (22-62)||(50466345-50466385)
chr1 (21-61)||(50849094-50849134)
chr1 (15-51)||(52043283-52043319)
[»] chr3 (58 HSPs)
chr3 (15-61)||(19126549-19126595)
chr3 (15-56)||(38094632-38094673)
chr3 (12-56)||(21914083-21914127)
chr3 (21-61)||(53633638-53633678)
chr3 (18-61)||(17588362-17588405)
chr3 (18-61)||(48315042-48315085)
chr3 (18-55)||(35126287-35126324)
chr3 (18-62)||(552173-552217)
chr3 (18-62)||(19468450-19468494)
chr3 (18-62)||(38130977-38131021)
chr3 (15-51)||(52904158-52904194)
chr3 (18-61)||(1149087-1149130)
chr3 (18-61)||(7974530-7974573)
chr3 (18-61)||(8113580-8113623)
chr3 (18-61)||(8127463-8127506)
chr3 (18-61)||(10922326-10922369)
chr3 (22-61)||(11574253-11574292)
chr3 (18-61)||(16980372-16980415)
chr3 (18-61)||(21967556-21967599)
chr3 (18-61)||(21989992-21990035)
chr3 (18-61)||(22486683-22486726)
chr3 (18-61)||(23525139-23525182)
chr3 (18-61)||(33771690-33771733)
chr3 (22-61)||(47377371-47377410)
chr3 (18-61)||(51250251-51250294)
chr3 (18-61)||(51882218-51882261)
chr3 (19-62)||(55066619-55066662)
chr3 (18-56)||(10926474-10926512)
chr3 (15-61)||(22462312-22462358)
chr3 (18-56)||(25505719-25505757)
chr3 (19-61)||(29373474-29373516)
chr3 (15-61)||(34325998-34326044)
chr3 (18-56)||(35191835-35191873)
chr3 (18-56)||(52119381-52119419)
chr3 (18-63)||(13800665-13800710)
chr3 (18-51)||(16663254-16663287)
chr3 (23-56)||(29535252-29535285)
chr3 (22-55)||(39869829-39869862)
chr3 (22-55)||(48673869-48673902)
chr3 (18-51)||(54230117-54230150)
chr3 (18-62)||(4402104-4402148)
chr3 (21-61)||(7464512-7464552)
chr3 (10-62)||(9321415-9321467)
chr3 (18-50)||(10594688-10594720)
chr3 (18-61)||(12043114-12043158)
chr3 (18-50)||(14741805-14741837)
chr3 (21-61)||(21160052-21160092)
chr3 (18-62)||(21513287-21513331)
chr3 (18-62)||(25441518-25441562)
chr3 (18-50)||(28266727-28266759)
chr3 (18-62)||(30200825-30200869)
chr3 (15-51)||(36431819-36431855)
chr3 (18-62)||(37465359-37465403)
chr3 (15-51)||(37921013-37921049)
chr3 (1-61)||(43334513-43334573)
chr3 (15-51)||(46298070-46298106)
chr3 (21-61)||(48376835-48376875)
chr3 (18-62)||(53996298-53996342)
[»] chr2 (58 HSPs)
chr2 (18-64)||(18324912-18324958)
chr2 (18-62)||(4897542-4897586)
chr2 (18-62)||(4944936-4944980)
chr2 (18-62)||(27152352-27152396)
chr2 (18-56)||(7772478-7772516)
chr2 (18-56)||(22359010-22359048)
chr2 (18-56)||(26133538-26133576)
chr2 (18-62)||(16204835-16204879)
chr2 (18-62)||(20120739-20120783)
chr2 (18-62)||(23250338-23250382)
chr2 (2-50)||(30263273-30263321)
chr2 (15-51)||(31963081-31963117)
chr2 (18-62)||(36547253-36547297)
chr2 (1-61)||(40967372-40967432)
chr2 (18-61)||(2256971-2257014)
chr2 (22-61)||(2661070-2661109)
chr2 (18-61)||(5676739-5676782)
chr2 (18-61)||(15654887-15654930)
chr2 (18-61)||(18231491-18231534)
chr2 (18-61)||(19179068-19179111)
chr2 (18-61)||(24593376-24593419)
chr2 (18-61)||(31815905-31815948)
chr2 (18-61)||(32091189-32091232)
chr2 (18-61)||(34977204-34977247)
chr2 (18-61)||(35727437-35727480)
chr2 (18-61)||(37320535-37320578)
chr2 (18-61)||(39088817-39088860)
chr2 (22-61)||(42372173-42372212)
chr2 (18-56)||(5168597-5168635)
chr2 (18-64)||(6141217-6141263)
chr2 (19-61)||(7379625-7379667)
chr2 (18-56)||(12124689-12124727)
chr2 (18-56)||(15462882-15462920)
chr2 (18-52)||(26400760-26400794)
chr2 (18-64)||(27314864-27314910)
chr2 (18-56)||(40099401-40099439)
chr2 (1-51)||(43117191-43117241)
chr2 (18-51)||(12124555-12124588)
chr2 (18-47)||(12231891-12231920)
chr2 (21-62)||(13000684-13000725)
chr2 (18-55)||(14925250-14925287)
chr2 (18-51)||(21482537-21482570)
chr2 (18-55)||(22267519-22267556)
chr2 (21-62)||(28644524-28644565)
chr2 (18-51)||(28771592-28771625)
chr2 (18-51)||(35685079-35685112)
chr2 (18-62)||(4056789-4056833)
chr2 (1-61)||(10723939-10723999)
chr2 (19-55)||(12353662-12353698)
chr2 (22-62)||(13100286-13100326)
chr2 (18-50)||(19095130-19095162)
chr2 (1-61)||(22608527-22608587)
chr2 (18-54)||(34376893-34376929)
chr2 (18-62)||(36264497-36264541)
chr2 (18-62)||(38835258-38835302)
chr2 (1-61)||(41165435-41165495)
chr2 (23-55)||(42778625-42778657)
chr2 (1-61)||(45032693-45032753)
[»] chr7 (45 HSPs)
chr7 (18-63)||(37230046-37230091)
chr7 (9-61)||(35763705-35763757)
chr7 (1-56)||(3584209-3584264)
chr7 (18-61)||(21322175-21322218)
chr7 (18-56)||(44941431-44941469)
chr7 (18-55)||(39458562-39458599)
chr7 (17-61)||(5833042-5833086)
chr7 (18-62)||(8615022-8615066)
chr7 (18-62)||(22991409-22991453)
chr7 (18-62)||(24991780-24991824)
chr7 (21-61)||(28012635-28012675)
chr7 (21-61)||(34000262-34000302)
chr7 (18-61)||(2916102-2916145)
chr7 (18-61)||(7872766-7872809)
chr7 (18-61)||(21050240-21050283)
chr7 (22-61)||(21164780-21164819)
chr7 (18-57)||(23413064-23413103)
chr7 (18-61)||(26816682-26816725)
chr7 (18-61)||(27263341-27263384)
chr7 (18-61)||(27270235-27270278)
chr7 (18-61)||(46987086-46987129)
chr7 (18-61)||(48007565-48007608)
chr7 (18-64)||(6384848-6384894)
chr7 (18-56)||(10362322-10362360)
chr7 (18-56)||(18714453-18714491)
chr7 (18-56)||(34568351-34568389)
chr7 (15-61)||(35666303-35666349)
chr7 (19-61)||(37930044-37930086)
chr7 (15-61)||(39926553-39926599)
chr7 (18-56)||(48837872-48837910)
chr7 (18-51)||(2618689-2618722)
chr7 (18-51)||(4340137-4340170)
chr7 (19-56)||(6567416-6567453)
chr7 (18-55)||(19599151-19599188)
chr7 (24-61)||(20103478-20103515)
chr7 (18-62)||(21105602-21105646)
chr7 (18-62)||(25888899-25888943)
chr7 (18-62)||(25923390-25923434)
chr7 (19-55)||(29461840-29461876)
chr7 (18-62)||(30296332-30296376)
chr7 (10-50)||(34773242-34773282)
chr7 (18-62)||(37864424-37864468)
chr7 (20-56)||(39043760-39043796)
chr7 (13-61)||(40762220-40762268)
chr7 (10-38)||(41425245-41425273)
[»] chr8 (32 HSPs)
chr8 (13-61)||(37999433-37999481)
chr8 (18-61)||(23816790-23816833)
chr8 (18-56)||(8442505-8442543)
chr8 (10-55)||(42575972-42576017)
chr8 (15-55)||(989592-989632)
chr8 (1-61)||(13357442-13357502)
chr8 (1-61)||(17704013-17704073)
chr8 (18-62)||(30623292-30623336)
chr8 (18-61)||(15079170-15079213)
chr8 (19-62)||(18942917-18942960)
chr8 (18-61)||(19778065-19778108)
chr8 (10-53)||(29186510-29186553)
chr8 (18-61)||(33451367-33451410)
chr8 (18-56)||(8146136-8146174)
chr8 (21-63)||(8910002-8910044)
chr8 (18-56)||(8984512-8984550)
chr8 (15-61)||(13477900-13477946)
chr8 (21-55)||(19701365-19701399)
chr8 (18-55)||(6447195-6447232)
chr8 (18-55)||(7553685-7553722)
chr8 (18-55)||(7869659-7869696)
chr8 (18-55)||(7968958-7968995)
chr8 (18-55)||(13105100-13105137)
chr8 (18-55)||(17806480-17806517)
chr8 (18-51)||(34968565-34968598)
chr8 (18-51)||(37938505-37938538)
chr8 (18-51)||(42208487-42208520)
chr8 (18-62)||(56822-56866)
chr8 (18-50)||(9067093-9067125)
chr8 (9-61)||(13272531-13272583)
chr8 (18-62)||(28219862-28219906)
chr8 (18-62)||(30427730-30427774)
[»] scaffold0238 (1 HSPs)
scaffold0238 (18-61)||(25389-25432)
[»] scaffold0126 (1 HSPs)
scaffold0126 (18-61)||(34906-34949)
[»] chr6 (32 HSPs)
chr6 (18-61)||(8831207-8831250)
chr6 (15-61)||(404163-404209)
chr6 (18-56)||(31971534-31971572)
chr6 (1-61)||(3808119-3808179)
chr6 (21-61)||(24438303-24438343)
chr6 (18-62)||(28757042-28757086)
chr6 (21-61)||(28898856-28898896)
chr6 (19-62)||(361753-361796)
chr6 (18-61)||(788866-788909)
chr6 (21-56)||(6196552-6196587)
chr6 (18-61)||(8834930-8834973)
chr6 (18-61)||(13583549-13583592)
chr6 (18-61)||(13654224-13654267)
chr6 (18-61)||(14679125-14679168)
chr6 (18-61)||(33824881-33824924)
chr6 (18-56)||(2726435-2726473)
chr6 (10-56)||(4922418-4922464)
chr6 (18-56)||(9977062-9977100)
chr6 (23-56)||(12319250-12319283)
chr6 (22-55)||(13655167-13655200)
chr6 (18-63)||(21047740-21047785)
chr6 (18-63)||(21095525-21095570)
chr6 (22-63)||(26522470-26522511)
chr6 (1-61)||(331887-331947)
chr6 (19-63)||(361164-361208)
chr6 (18-61)||(3863351-3863395)
chr6 (18-61)||(7273050-7273094)
chr6 (21-61)||(9987081-9987121)
chr6 (21-61)||(10497173-10497213)
chr6 (18-62)||(18254119-18254163)
chr6 (12-56)||(24212551-24212595)
chr6 (15-51)||(26521130-26521166)
[»] scaffold0027 (1 HSPs)
scaffold0027 (21-61)||(61591-61631)
[»] scaffold0533 (1 HSPs)
scaffold0533 (18-61)||(8869-8912)
[»] scaffold0007 (1 HSPs)
scaffold0007 (18-61)||(1571-1614)
[»] scaffold0004 (1 HSPs)
scaffold0004 (18-61)||(91580-91623)
[»] scaffold0070 (1 HSPs)
scaffold0070 (18-56)||(42950-42988)
[»] scaffold0012 (1 HSPs)
scaffold0012 (18-56)||(119972-120010)
[»] scaffold0006 (1 HSPs)
scaffold0006 (18-56)||(210096-210134)
[»] scaffold0088 (1 HSPs)
scaffold0088 (18-55)||(48027-48064)
[»] scaffold0074 (1 HSPs)
scaffold0074 (24-61)||(44995-45032)
[»] scaffold0026 (1 HSPs)
scaffold0026 (18-51)||(75335-75368)
[»] scaffold0005 (1 HSPs)
scaffold0005 (18-51)||(239817-239850)
[»] scaffold0044 (1 HSPs)
scaffold0044 (18-62)||(42352-42396)
[»] scaffold0021 (1 HSPs)
scaffold0021 (18-62)||(161140-161184)
[»] scaffold0015 (1 HSPs)
scaffold0015 (25-61)||(75183-75219)


Alignment Details
Target: chr5 (Bit Score: 72; Significance: 8e-33; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 72; E-Value: 8e-33
Query Start/End: Original strand, 37 - 124
Target Start/End: Complemental strand, 40325077 - 40324990
Alignment:
Q  37 tccttaccaactgagttaagatcacatatacagataattgttttgtttgataagggacataattggaaaattaaaaaatagttaggaa 124  Q
    |||||||||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  40325077 tccttaccaactgagttaagatcagatagacaaataattgttttgtttgataagggacataattgaaaaattaaaaaatagttaggaa 40324990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 124 - 284
Target Start/End: Complemental strand, 40324931 - 40324777
Alignment:
Q  124 aaaactatgtatcttttgtatatagctagcatattaacttcnnnnnnnntcatcaatattttgcatgtattaacaaaatttgcacaagaccggcnnnnnn 223  Q
    ||||||||||||||||||||||||||||| ||||||||||         |||| ||||| |||||||||||||||||||||||||||||| |||          
T  40324931 aaaactatgtatcttttgtatatagctaggatattaacttaaaaaaaaatcattaatatcttgcatgtattaacaaaatttgcacaagactggcagcagt 40324832  T
Q  224 nnnnnnnnnnnngaatgaataaaaggaagaaatttgaagtgaaatgaagaagagaatttac 284  Q
                ||||||||||||||||||||||||||||||||| |||||||||||||||    
T  40324831 agtagt------gaatgaataaaaggaagaaatttgaagtgaaataaagaagagaatttac 40324777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 31198752 - 31198709
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31198752 ttgcatatattatgcattatccttaccaactgagttaagatcac 31198709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 15 - 62
Target Start/End: Original strand, 40056605 - 40056652
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||||||||| |||||||||||||||||||| |||||    
T  40056605 acattgcatatattatgcattgtccttaccaactgagttaagctcaca 40056652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 11647240 - 11647197
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  11647240 ttgcatatattatgcattgtccttaccaactgagttaagttcac 11647197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 22498985 - 22498942
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  22498985 ttgcatatattatgcattgtccttaccaactgagttaagctcac 22498942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 31545914 - 31545871
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||| ||||||||||||||| ||||    
T  31545914 ttgcatatattatgcattatcctaaccaactgagttaagctcac 31545871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 43108612 - 43108574
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  43108612 ttgcatatattatgcattgtccttaccaactgagttaag 43108574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 20258588 - 20258551
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||||| |||||||||||||||    
T  20258588 ttgcatatattatgcattatccataccaactgagttaa 20258551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 2642778 - 2642818
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||||||||||| |||||||| ||||||    
T  2642778 acattgcatatattatgcattatccctaccaactaagttaa 2642818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 11720937 - 11720893
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||    
T  11720937 ttgcatatattatgcattgtccctaccaactgagttaagctcaca 11720893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 30893993 - 30893933
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||  ||||||| |||||||||||||||||| || |||| |||||||||||| ||||    
T  30893993 ggtttgaacctcataccttgcatatattatgcattgtctttacaaactgagttaagctcac 30893933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 34702530 - 34702490
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  34702530 catatattatgcattgtccttaccaactgagttaagctcac 34702490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 38495185 - 38495141
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||| ||||||||||||| |||||||||||||||| |||||    
T  38495185 ttgcatattttatgcattatccataccaactgagttaagttcaca 38495141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 3671261 - 3671218
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||| ||||||||||| ||||||||||||| ||||    
T  3671261 ttgcatatattatacattatccttatcaactgagttaagctcac 3671218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 5107263 - 5107306
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||| | |||||||||||||||| ||||    
T  5107263 ttgcatatattatgcattattcataccaactgagttaagctcac 5107306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 6898064 - 6898021
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| ||||||||| ||||||| ||||    
T  6898064 ttgcatatattatgcattatctttaccaactaagttaagctcac 6898021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8545007 - 8545050
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||| ||||||||||||| ||||    
T  8545007 ttgcatatattatgcattgtccttatcaactgagttaagctcac 8545050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 11844456 - 11844499
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  11844456 ttgcatatattatgcattgtccttaccaactgagctaagttcac 11844499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 13906702 - 13906745
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||| ||||||||||||| |||||||||||||||||||| ||||    
T  13906702 ttgcttatattatgcattgtccttaccaactgagttaagctcac 13906745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 16133083 - 16133126
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  16133083 ttgcatatattatgcattgtccttaccaactgagctaagctcac 16133126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17046377 - 17046334
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  17046377 ttgcatatattatgcattgtccataccaactgagttaagctcac 17046334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 27679541 - 27679498
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| |||||||||||| |||| ||||    
T  27679541 ttgcatatattatgcattatctttaccaactgagctaagctcac 27679498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33654791 - 33654748
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  33654791 ttgcatatattatgcattgtccctaccaactgagttaagctcac 33654748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 36321512 - 36321555
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  36321512 ttgcatatattatgcattgtccttaccaactgagctaagctcac 36321555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 36623192 - 36623235
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||| |||| ||||||||||||| ||||    
T  36623192 ttgcatatattatgcattattcttatcaactgagttaagctcac 36623235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 39914944 - 39914901
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||    
T  39914944 ttgcatatattatgcattgtccttaccaattgagttaagctcac 39914901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 41650957 - 41651000
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  41650957 ttgcatatattatgcattgtccataccaactgagttaagctcac 41651000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 5485232 - 5485186
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| ||| ||||||||||| |||| ||||    
T  5485232 acattgcatatattatgcattgtccctaccaactgagctaagctcac 5485186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 5846072 - 5846034
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  5846072 ttgcatatattatgcattgtccttaccaactgagctaag 5846034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 19068457 - 19068495
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||||||| ||||||||||| ||||    
T  19068457 ttgcatatattatgcattatccataccaactgagctaag 19068495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 21309009 - 21308975
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||| |||||||||||||||||||    
T  21309009 catatattatgcattgtccttaccaactgagttaa 21308975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Complemental strand, 21316922 - 21316888
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||| |||||||||||||||||||    
T  21316922 catatattatgcattgtccttaccaactgagttaa 21316888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 9123866 - 9123907
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||| || ||||||||||||||||| |||||    
T  9123866 catatattatgcattgtctttaccaactgagttaagctcaca 9123907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 11017219 - 11017186
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||||||| |||||||||||    
T  11017219 ttgcatatattatgcattatccctaccaactgag 11017186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 12672259 - 12672296
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||||||||||| ||||| ||||||    
T  12672259 ttgcatatattatgcattatccttatcaacttagttaa 12672296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 18278277 - 18278314
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| | |||||||||||||||||    
T  18278277 ttgcatatattatgcattgttcttaccaactgagttaa 18278314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 27651551 - 27651592
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||| |||||||||||| ||||||| |||||    
T  27651551 catatattatgcattgtccttaccaactaagttaagctcaca 27651592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 34206270 - 34206233
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| || ||||||||||||||||    
T  34206270 ttgcatatattatgcattgtctttaccaactgagttaa 34206233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 40446026 - 40445989
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  40446026 ttgcatatattatgcattgtccttatcaactgagttaa 40445989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 1746022 - 1745978
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||| ||||||| ||| ||||||||||||| |||||    
T  1746022 ttgcatatattatacattatctttaacaactgagttaagctcaca 1745978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 3389205 - 3389169
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagtta 54  Q
    |||||||||||||||||| ||| ||||||||||||||    
T  3389205 ttgcatatattatgcattgtccataccaactgagtta 3389169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 5614805 - 5614765
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||| || ||||||||||||| ||||    
T  5614805 catatattatgcattatccatatcaactgagttaagttcac 5614765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 16531293 - 16531325
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    |||||||||||||||||| ||||||||||||||    
T  16531293 ttgcatatattatgcattgtccttaccaactga 16531325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 16752520 - 16752552
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    |||||||||||||||||| ||||||||||||||    
T  16752520 ttgcatatattatgcattgtccttaccaactga 16752552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Complemental strand, 20211328 - 20211280
Alignment:
Q  13 atacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||| |||||||||||||| ||||||| ||||||||||| |||| ||||    
T  20211328 ataccttgcatatattatgtattatccctaccaactgagataagctcac 20211280  T

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Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 23118072 - 23118112
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| |||||| ||||||||||||| ||||    
T  23118072 catatattatgcattgtccttatcaactgagttaagctcac 23118112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 10 - 62
Target Start/End: Complemental strand, 38416108 - 38416056
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||| |||||||||||||||||||||||||||||||||| |||| |||||    
T  38416108 ctcataccttgcatatattatgcattatccttaccaactgagctaagctcaca 38416056  T

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Target: chr4; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 19908735 - 19908691
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  19908735 ttgcatatattatgcattgtccttaccaactgagttaagctcaca 19908691  T

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Target: chr4; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 29908099 - 29908056
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  29908099 ttgcatatattatgcattgtccttaccaactgagttaagctcac 29908056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 54151643 - 54151686
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||| ||||||||||||||||||||||||| ||||    
T  54151643 ttgcatatattatacattatccttaccaactgagttaagctcac 54151686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 8027415 - 8027448
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||||||||||||||||||||    
T  8027415 ttgcatatattatgcattatccttaccaactgag 8027448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 20096288 - 20096325
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||||| |||||||||||||||    
T  20096288 ttgcatatattatgcattatccctaccaactgagttaa 20096325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 30135180 - 30135139
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||||||| ||||||||||||| |||||    
T  30135180 catatattatgcattatccttatcaactgagttaagctcaca 30135139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 56204990 - 56204953
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| |||||||||||||||||||    
T  56204990 ttgcatatattatgcattgtccttaccaactgagttaa 56204953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 39842033 - 39842073
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| |||||| ||||||||||||||||||    
T  39842033 catatattatgcattgtccttatcaactgagttaagatcac 39842073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43034343 - 43034403
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||  |||| || |||||||||||||||||| ||| |||||||||||||||| ||||    
T  43034343 ggtttgaacctcagaccttgcatatattatgcattgtccataccaactgagttaagctcac 43034403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 50442765 - 50442809
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||||||| ||||||||||| |||| |||||    
T  50442765 ttgcatatattatgcattatccctaccaactgagctaagctcaca 50442809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 5360298 - 5360341
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| ||||||||| ||||||||||||||||||||| ||||    
T  5360298 ttgcatacattatgcatgatccttaccaactgagttaagttcac 5360341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 6520114 - 6520071
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| || |||| |||||||||||||||||    
T  6520114 ttgcatatattatgcattgtctttactaactgagttaagatcac 6520071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 7230323 - 7230280
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  7230323 ttgcatatattatgcattgtccttaccaactgagctaagctcac 7230280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 24488461 - 24488422
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||| || ||||||||||||||||||||||    
T  24488461 atatattatgcattgtcattaccaactgagttaagatcac 24488422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 42845068 - 42845025
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||    
T  42845068 ttgcatatattatgcattgtcctttccaactgagttaagctcac 42845025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 56551610 - 56551649
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaaga 57  Q
    |||||||||||||||||| ||||||||||||||| |||||    
T  56551610 ttgcatatattatgcattgtccttaccaactgagctaaga 56551649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 5179907 - 5179949
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| |||||| |||||||||||||||||||||| ||||    
T  5179907 tgcatataatatgcaatatccttaccaactgagttaagttcac 5179949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 21318271 - 21318309
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  21318271 ttgcatatattatgcattgtccctaccaactgagttaag 21318309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 22279538 - 22279576
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  22279538 ttgcatatattatgcattgtccttaccaactgagctaag 22279576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 33900742 - 33900780
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  33900742 ttgcatatattatgcattgtccttaccaactgagataag 33900780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 34595957 - 34595991
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||| |||||||||||||||||||    
T  34595957 catatattatgcattgtccttaccaactgagttaa 34595991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 44689535 - 44689497
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  44689535 ttgcatatattatgcattgttcttaccaactgagttaag 44689497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 46409499 - 46409537
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| || |||||||||||||||||    
T  46409499 ttgcatatattatgcattgtctttaccaactgagttaag 46409537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 46676516 - 46676554
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  46676516 ttgcatatattatgcattgtccttaccaactgagctaag 46676554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 49949377 - 49949339
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  49949377 ttgcatatattatgcattgtccttaccaactgagctaag 49949339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 66
Target Start/End: Original strand, 8464096 - 8464141
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcacatata 66  Q
    ||||||||||| ||| ||||||||||||||| |||| |||||||||    
T  8464096 catatattatgtattgtccttaccaactgagctaagctcacatata 8464141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 12058362 - 12058329
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||||||||||||| ||||||    
T  12058362 ttgcatatattatgcattatccttaccgactgag 12058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 14577525 - 14577558
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  14577525 ttgcatatattatgcattgtccttaccaactgag 14577558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 20383531 - 20383486
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacat 63  Q
    |||||||||||||||||| ||| ||||||||||| |||| ||||||    
T  20383531 ttgcatatattatgcattgtccataccaactgagctaagctcacat 20383486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 10 - 51
Target Start/End: Original strand, 21052567 - 21052608
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactgag 51  Q
    ||||||| |||||||||||||| ||||||| |||||||||||    
T  21052567 ctcataccttgcatatattatgtattatccataccaactgag 21052608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 30380573 - 30380536
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  30380573 ttgcatatattatacattgtccttaccaactgagttaa 30380536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 34247483 - 34247450
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  34247483 ttgcatatattatgcattgtccttaccaactgag 34247450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 34968382 - 34968341
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||  ||||||||||||||||| |||||    
T  34968382 catatattatgcattatttttaccaactgagttaagctcaca 34968341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 53190338 - 53190305
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||||||| |||||||||||    
T  53190338 ttgcatatattatgcattatccataccaactgag 53190305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 55430639 - 55430602
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||| | |||||||||||||||    
T  55430639 ttgcatatattatgcattattcctaccaactgagttaa 55430602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 6087790 - 6087746
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||||||  ||||||||||| |||| |||||    
T  6087790 ttgcatatattatgcattatctataccaactgagctaagctcaca 6087746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 16743302 - 16743346
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||||||| || |||||||| |||| |||||    
T  16743302 ttgcatatattatgcattatccatatcaactgagctaagctcaca 16743346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 19854608 - 19854564
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||||    
T  19854608 ttgcatatattatgcattgtccataccaactgagctaagctcaca 19854564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 20131466 - 20131426
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||| ||||| |||||||||||||| |||||    
T  20131466 atatattatgcattgtccttgccaactgagttaagttcaca 20131426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 31780788 - 31780744
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||| ||||||||| ||||||||||||||| |||| |||||    
T  31780788 ttgcatattttatgcattgtccttaccaactgagctaagctcaca 31780744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42756124 - 42756168
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||| |||||||| |||| |||||    
T  42756124 ttgcatatattatgcattgtccttatcaactgagctaagttcaca 42756168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 40; Significance: 0.0000000000001; HSPs: 64)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 47719125 - 47719168
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||||||||||||||||| ||||    
T  47719125 ttgcatatattatgcattatccttaccaactgagttaagctcac 47719168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 18056726 - 18056772
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||    
T  18056726 ctcacacattgcatatattatgcattgtccttaccaactgagttaag 18056772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 24631882 - 24631845
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||||||||||||||||||||||||    
T  24631882 ttgcatatattatgcattatccttaccaactgagttaa 24631845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 28039878 - 28039922
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  28039878 ttgcatatattatgcattgtccttaccaactgagttaagctcaca 28039922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 29800576 - 29800533
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| |||||||||||||||||||||||||||||| ||||    
T  29800576 ttgcatattttatgcattatccttaccaactgagttaagctcac 29800533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 49875617 - 49875660
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  49875617 ttgcatatattatgcattgtccttaccaactgagttaagctcac 49875660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 1408478 - 1408440
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  1408478 ttgcatatattatgcattgtccttaccaactgagttaag 1408440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 9872123 - 9872156
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||||||||||||||||||||    
T  9872123 ttgcatatattatgcattatccttaccaactgag 9872156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 19396209 - 19396246
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||||| |||||||||||||||    
T  19396209 ttgcatatattatgcattatccctaccaactgagttaa 19396246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 40618953 - 40618916
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  40618953 ttgcatatattatgcattatctttaccaactgagttaa 40618916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 41972749 - 41972786
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||||||||||| ||||||||||||||||    
T  41972749 tgcatatattatgcattatccctaccaactgagttaag 41972786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 43843934 - 43843889
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacat 63  Q
    |||||||||||||||||| |||||||||||| ||||||| ||||||    
T  43843934 ttgcatatattatgcattgtccttaccaactaagttaagctcacat 43843889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 29936029 - 29935989
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||||||| ||| |||||||||||||||    
T  29936029 acattgcatatattatgcattgtccataccaactgagttaa 29935989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 51067912 - 51067956
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||| ||||| |||||||||||||||||| |||||    
T  51067912 ttgcatatattatgtattattcttaccaactgagttaagctcaca 51067956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 2889944 - 2889987
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  2889944 ttgcatatattatgcattgtccctaccaactgagttaagctcac 2889987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8266204 - 8266247
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| |||||||||| ||| |||||||||||||||||||||    
T  8266204 ttgcatacattatgcattgtccataccaactgagttaagatcac 8266247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 9639835 - 9639878
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||    
T  9639835 ttgcatatattatgcattgtccttaccaagtgagttaagctcac 9639878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 10843339 - 10843382
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||    
T  10843339 ttgcatatattatgcattatccttatcaactgagctaagttcac 10843382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 12212338 - 12212295
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||| |||||| ||||||||| ||||    
T  12212338 ttgcatatattatgcattatccctaccaaatgagttaagctcac 12212295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 13794526 - 13794569
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||    
T  13794526 ttgcatatattatgcattatccttatcaactgagctaagctcac 13794569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17283994 - 17283951
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  17283994 ttgcatatattatgcattgtccttaccaactgagctaagctcac 17283951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 26256107 - 26256150
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||| ||||| ||||||||||||| ||||    
T  26256107 ttgcatatattatgcattacccttatcaactgagttaagctcac 26256150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 60
Target Start/End: Complemental strand, 30248094 - 30248055
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatca 60  Q
    ||||||||||||||||||| | ||||||||||||||||||    
T  30248094 catatattatgcattatccctgccaactgagttaagatca 30248055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 56
Target Start/End: Complemental strand, 31092701 - 31092666
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||||||||||| |||||||||    
T  31092701 catatattatgcattatccttaccaaatgagttaag 31092666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 34733443 - 34733400
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  34733443 ttgcatatattatgcattgtccttaccaactgagctaagctcac 34733400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35473995 - 35473952
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||||||| |||| |||| ||||    
T  35473995 ttgcatatattatgcattatccttaccaattgagctaagctcac 35473952  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 38448884 - 38448927
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  38448884 ttgcatatattatgcattgtccttaccaactgagctaagctcac 38448927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 52267807 - 52267764
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  52267807 ttgcatattttatgcattgtccttaccaactgagttaagctcac 52267764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 3431390 - 3431336
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||  ||| |||||||||||||||||||||| | | |||||||||||||||    
T  3431390 ggtttgaacctcgtacattgcatatattatgcattcttcctaccaactgagttaa 3431336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 6809814 - 6809860
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| ||||||| ||||||| |||| ||||    
T  6809814 acattgcatatattatgcattgtccttacaaactgagctaagttcac 6809860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 10356202 - 10356244
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||| ||| |||||||||||||||| ||||    
T  10356202 tgcatatattatgcattgtccataccaactgagttaagctcac 10356244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 12852223 - 12852257
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||||| |||||||||||||||    
T  12852223 catatattatgcattatccctaccaactgagttaa 12852257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 30548109 - 30548147
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| |||||||||||| |||||||    
T  30548109 ttgcatatattatgcattgtccttaccaactaagttaag 30548147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 31061921 - 31061959
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||| |||||||| ||||||||||||||||||||    
T  31061921 ttgcatataatatgcattgtccttaccaactgagttaag 31061959  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 49868071 - 49868017
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||| ||||  || |||||||||||||||||||||| || ||||||||||||    
T  49868071 ggtttgaatctcggaccttgcatatattatgcattatccatatcaactgagttaa 49868017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 50263423 - 50263385
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||||||||||| |||||||||||| ||||    
T  50263423 ttgcatatattatgcattatcgttaccaactgagctaag 50263385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 50638934 - 50638972
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  50638934 ttgcatatattatgcattgtccttaccaactgagctaag 50638972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 6000161 - 6000198
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  6000161 ttgcatatattatgcattgtcctaaccaactgagttaa 6000198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7574136 - 7574173
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||| |||||||| |||||||||||||||||||    
T  7574136 ttgcatatactatgcattgtccttaccaactgagttaa 7574173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 10489840 - 10489803
Alignment:
Q  24 atattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||||| ||||| ||||    
T  10489840 atattatgcattatccttaccaactgaattaagttcac 10489803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 13135778 - 13135811
Alignment:
Q  23 tatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||| ||||||||||||||||||||||||    
T  13135778 tatattatggattatccttaccaactgagttaag 13135811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 25365014 - 25365051
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| | |||||||||||||||||    
T  25365014 ttgcatatattatgcattgttcttaccaactgagttaa 25365051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 29987130 - 29987167
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| ||||| |||||||||||||    
T  29987130 ttgcatatattatgcattgtccttgccaactgagttaa 29987167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Original strand, 33153901 - 33153942
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||| ||| |||||||||||||||| |||||    
T  33153901 catatattatgcattgtccctaccaactgagttaagctcaca 33153942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 41926862 - 41926821
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||| ||||||||||||||| |||| |||||    
T  41926862 catatattatgcattgtccttaccaactgagctaagctcaca 41926821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 42416846 - 42416813
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||||||||||| ||||||||    
T  42416846 ttgcatatattatgcattatccttatcaactgag 42416813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 47
Target Start/End: Original strand, 45418081 - 45418110
Alignment:
Q  18 ttgcatatattatgcattatccttaccaac 47  Q
    ||||||||||||||||||||||||||||||    
T  45418081 ttgcatatattatgcattatccttaccaac 45418110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 51370616 - 51370583
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||| ||||||||||||||||    
T  51370616 ttgcatatattatgcatcatccttaccaactgag 51370583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 5279385 - 5279425
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||||||| ||| |||| ||||||||||    
T  5279385 acattgcatatattatgcattgtccataccgactgagttaa 5279425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 6094462 - 6094422
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||| |||||||| |||||||||||||||| ||||    
T  6094462 catatattatacattatccataccaactgagttaagctcac 6094422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8253782 - 8253738
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||||    
T  8253782 ttgcatatattatgcattgtccataccaactgagctaagctcaca 8253738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 9427463 - 9427427
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagtta 54  Q
    |||||||| |||| |||||||||||||||||||||||    
T  9427463 ttgcatattttattcattatccttaccaactgagtta 9427427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Original strand, 10132462 - 10132494
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    |||||||||||||||||| ||||||||||||||    
T  10132462 ttgcatatattatgcattgtccttaccaactga 10132494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 10480754 - 10480714
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| ||||||||| |||||||||| ||||    
T  10480754 catatattatgcattgtccttaccatctgagttaagctcac 10480714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Complemental strand, 15764071 - 15764031
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||| ||||||||||||||| |||| |||||    
T  15764071 atatattatgcattgtccttaccaactgagataaggtcaca 15764031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 28832189 - 28832233
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| | | |||||||||||||||| |||||    
T  28832189 ttgcatatattatgcattgttcataccaactgagttaagctcaca 28832233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 30678834 - 30678874
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| ||| |||||||||||||||| ||||    
T  30678834 catatattatgcattgtccctaccaactgagttaagctcac 30678874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 34032370 - 34032414
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||  || |||||||||||||||||||| |||||    
T  34032370 ttgcatatattatggtttgtccttaccaactgagttaagttcaca 34032414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 34808581 - 34808625
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||| |||||||| |||| |||||    
T  34808581 ttgcatatattatgcattgtccttaacaactgagctaagctcaca 34808625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 37944151 - 37944191
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||||||| |||| |||| ||||    
T  37944151 catatattatgcattatccttaccaattgagataagctcac 37944191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Original strand, 48264489 - 48264525
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagtta 54  Q
    |||||||| ||||||||||||| ||||||||||||||    
T  48264489 ttgcatattttatgcattatccataccaactgagtta 48264525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 50466345 - 50466385
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||| ||||||||||||||| ||||||||| |||||    
T  50466345 atatattatacattatccttaccaattgagttaaggtcaca 50466385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 50849094 - 50849134
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| || ||||||||||||||||| ||||    
T  50849094 catatattatgcattgtcattaccaactgagttaagctcac 50849134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 52043319 - 52043283
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||| ||||||||||||| |||||||||||    
T  52043319 acattgcatattttatgcattatccataccaactgag 52043283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 19126595 - 19126549
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||    
T  19126595 acattgcatatattatgcattatccttactaactgagttaagctcac 19126549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 15 - 56
Target Start/End: Original strand, 38094632 - 38094673
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||| |||||||||||||||||||||||||||    
T  38094632 acattgcatatattttgcattatccttaccaactgagttaag 38094673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 21914083 - 21914127
Alignment:
Q  12 catacattgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||| |||||||||||||||||| ||||||||||||||||||||    
T  21914083 cataccttgcatatattatgcattgtccttaccaactgagttaag 21914127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 53633638 - 53633678
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||||||||||||||||| ||||    
T  53633638 catatattatgcattatccttaccaactgagttaagctcac 53633678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 17588405 - 17588362
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  17588405 ttgcatatattatgcattgtccttaccaactgagttaagctcac 17588362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 48315042 - 48315085
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  48315042 ttgcatatattatgcattatccttaccaactgagctaagctcac 48315085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 35126287 - 35126324
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||||| |||||||||||||||    
T  35126287 ttgcatatattatgcattatccctaccaactgagttaa 35126324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 552217 - 552173
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||| ||||| |||||||||||||||| |||||    
T  552217 ttgcatatattatgcaatatccctaccaactgagttaagctcaca 552173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 19468494 - 19468450
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||    
T  19468494 ttgcatatattatgcattgtccataccaactgagttaagctcaca 19468450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 38130977 - 38131021
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||    
T  38130977 ttgcatatattatgcattgtccataccaactgagttaagctcaca 38131021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 52904158 - 52904194
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||||||| |||||||||||||||    
T  52904158 acattgcatatattatgcattgtccttaccaactgag 52904194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 1149087 - 1149130
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  1149087 ttgcatatattatgcattgtccttaccaactgagctaagctcac 1149130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 7974530 - 7974573
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||    
T  7974530 ttgcatatattatgcattatccataccaactgagctaagctcac 7974573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8113580 - 8113623
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  8113580 ttgcatatattatgcattgtccttaccaactgagctaagctcac 8113623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 8127506 - 8127463
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| ||||||||| |||||||||||||||||||| ||||    
T  8127506 ttgcatattttatgcattgtccttaccaactgagttaagctcac 8127463  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 10922326 - 10922369
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  10922326 ttgcatatattatgcattgtccctaccaactgagttaagctcac 10922369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Complemental strand, 11574292 - 11574253
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| ||||||||||||| ||||    
T  11574292 atatattatgcattatccttatcaactgagttaagctcac 11574253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 16980372 - 16980415
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  16980372 ttgcatatattatgcattgtccttaccaactgagctaagctcac 16980415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 21967599 - 21967556
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||    
T  21967599 ttgcatatattatacattgtccttaccaactgagttaagctcac 21967556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 21990035 - 21989992
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||    
T  21990035 ttgcatatattatacattgtccttaccaactgagttaagctcac 21989992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 22486726 - 22486683
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| | |||||||||||||||||| ||||    
T  22486726 ttgcatatattatgcattgttcttaccaactgagttaagctcac 22486683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 23525139 - 23525182
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||| |||||||||||||| ||||    
T  23525139 ttgcatatattatgcattgtccttgccaactgagttaagctcac 23525182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33771733 - 33771690
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||    
T  33771733 ttgcatatattatacattgtccttaccaactgagttaagctcac 33771690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 47377371 - 47377410
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  47377371 atatattatgcattgtccttaccaactgagttaagctcac 47377410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 51250251 - 51250294
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||| |||| |||||||||||||||||||| ||||    
T  51250251 ttgcatatattatacattgtccttaccaactgagttaagctcac 51250294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 51882218 - 51882261
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  51882218 ttgcatatattatgcattgtccataccaactgagttaagctcac 51882261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 62
Target Start/End: Original strand, 55066619 - 55066662
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||    
T  55066619 tgcatatattatgcattatccgtaccaactgagctaagctcaca 55066662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 10926512 - 10926474
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  10926512 ttgcatatattatgcattgtccttaccaactgagctaag 10926474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 22462358 - 22462312
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||| ||||||||||||||| |||||| ||||||||||||| ||||    
T  22462358 acattacatatattatgcattgtccttatcaactgagttaagctcac 22462312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 25505719 - 25505757
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||| ||||||||||||    
T  25505719 ttgcatatattatgcattgtccttacaaactgagttaag 25505757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 29373474 - 29373516
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| |||||| |||||||||||||||||||||| ||||    
T  29373474 tgcatataatatgcaatatccttaccaactgagttaagctcac 29373516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 34325998 - 34326044
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| ||| |||||||||| ||||| ||||    
T  34325998 acattgcatatattatgcattgtccataccaactgaattaagttcac 34326044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 35191835 - 35191873
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  35191835 ttgcatatattatgcattgtccttaccaactgagctaag 35191873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 52119419 - 52119381
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  52119419 ttgcatatattatgcattgtccttaccaactgagctaag 52119381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 13800710 - 13800665
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacat 63  Q
    |||||||||||||||||| | ||||||||||||| |||| ||||||    
T  13800710 ttgcatatattatgcattgttcttaccaactgagctaagctcacat 13800665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 16663254 - 16663287
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||||||| |||||||||||    
T  16663254 ttgcatatattatgcattatccataccaactgag 16663287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Original strand, 29535252 - 29535285
Alignment:
Q  23 tatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||||| ||||||||||||||||||    
T  29535252 tatattatgcattatgcttaccaactgagttaag 29535285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 39869829 - 39869862
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||| |||||||||||||||||||    
T  39869829 atatattatgcattgtccttaccaactgagttaa 39869862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Original strand, 48673869 - 48673902
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||| |||||||||||||||||||||||    
T  48673869 atatattatgtattatccttaccaactgagttaa 48673902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 54230117 - 54230150
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  54230117 ttgcatatattatgcattgtccttaccaactgag 54230150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 4402148 - 4402104
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||||    
T  4402148 ttgcatatattatccattgtccttaccaactgagctaagctcaca 4402104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 7464512 - 7464552
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| ||| |||||||||||||||| ||||    
T  7464512 catatattatgcattgtccctaccaactgagttaagctcac 7464552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 62
Target Start/End: Original strand, 9321415 - 9321467
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||| |||||||||||||||||| |||  |||||||||| |||| |||||    
T  9321415 ctcataccttgcatatattatgcattgtccaaaccaactgagctaagctcaca 9321467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 10594720 - 10594688
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    |||||||||||||||||| ||||||||||||||    
T  10594720 ttgcatatattatgcattgtccttaccaactga 10594688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 12043114 - 12043158
Alignment:
Q  18 ttgcatatatta-tgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||    
T  12043114 ttgcatatattaatgcattgtccttaccaactgagttaagctcac 12043158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 14741837 - 14741805
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    |||||||||||||||||| ||||||||||||||    
T  14741837 ttgcatatattatgcattgtccttaccaactga 14741805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 21160092 - 21160052
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||| || ||||||||||||| ||||    
T  21160092 catatattatgcattatccatatcaactgagttaagttcac 21160052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21513331 - 21513287
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||| |||||||||| ||||||||||||||| |||| |||||    
T  21513331 ttgcataaattatgcattgtccttaccaactgagctaagctcaca 21513287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 25441518 - 25441562
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||||    
T  25441518 ttgcatatattatgcattgtccataccaactgagctaagttcaca 25441562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 28266759 - 28266727
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    |||||||||||||||||| ||||||||||||||    
T  28266759 ttgcatatattatgcattgtccttaccaactga 28266727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30200869 - 30200825
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||| |||||||| |||| |||||    
T  30200869 ttgcatatattatgcattgtccttagcaactgagctaagctcaca 30200825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Complemental strand, 36431855 - 36431819
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||| |||||||| |||||||||||    
T  36431855 acattgcatatattatacattatccctaccaactgag 36431819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 37465403 - 37465359
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||| ||||||| |||| |||||||||||| |||||    
T  37465403 ttgcatatattatacattatcgttacaaactgagttaagctcaca 37465359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 37921013 - 37921049
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||||||||||| || ||||||||    
T  37921013 acattgcatatattatgcattatccctatcaactgag 37921049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 43334513 - 43334573
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| ||||| || ||| |||||||||||||  ||||||||| |||||||||| ||||    
T  43334513 ggtttgaatctcagaccttgtatatattatgcatggtccttaccagctgagttaagctcac 43334573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 46298070 - 46298106
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||||||||||  ||||||||||    
T  46298070 acattgcatatattatgcattatccaaaccaactgag 46298106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 48376875 - 48376835
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||| |||| ||||    
T  48376875 catatattatgcattatctttaccaactgagctaagctcac 48376835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 53996342 - 53996298
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||||    
T  53996342 ttgcatatattatgcattgtccataccaactgagctaagctcaca 53996298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 58)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 64
Target Start/End: Original strand, 18324912 - 18324958
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacata 64  Q
    |||||||||||||||||| |||||||||||||||||||| |||||||    
T  18324912 ttgcatatattatgcattgtccttaccaactgagttaagctcacata 18324958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 4897586 - 4897542
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  4897586 ttgcatatattatgcattgtccttaccaactgagttaagctcaca 4897542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 4944980 - 4944936
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||||||||||||||||| |||||    
T  4944980 ttgcatatattatgcattgtccttaccaactgagttaagctcaca 4944936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 27152396 - 27152352
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||||||| |||||||||||||||| |||||    
T  27152396 ttgcatatattatgcattatccctaccaactgagttaagctcaca 27152352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 7772478 - 7772516
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||||||||||||||||||| |||||||||    
T  7772478 ttgcatatattatgcattatccttaccaattgagttaag 7772516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 22359048 - 22359010
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  22359048 ttgcatatattatgcattgtccttaccaactgagttaag 22359010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 26133538 - 26133576
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  26133538 ttgcatatattatgcattgtccttaccaactgagttaag 26133576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 16204835 - 16204879
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||| ||||||||||||| |||||    
T  16204835 ttgcatatattatgcattgtccttatcaactgagttaagctcaca 16204879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 20120739 - 20120783
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||    
T  20120739 ttgcatatattatgcattgtccttaccaactgagctaagctcaca 20120783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 23250338 - 23250382
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| | |||||||||||||||||| |||||    
T  23250338 ttgcatatattatgcattgttcttaccaactgagttaagctcaca 23250382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 2 - 50
Target Start/End: Complemental strand, 30263321 - 30263273
Alignment:
Q  2 gtttgagtctcatacattgcatatattatgcattatccttaccaactga 50  Q
    |||||| ||||| ||||||||||||||||| ||| ||||||||||||||    
T  30263321 gtttgaatctcaaacattgcatatattatggattgtccttaccaactga 30263273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 31963081 - 31963117
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||||||||||| |||||||||||||||    
T  31963081 acattgcatatattatgcattgtccttaccaactgag 31963117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 36547253 - 36547297
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||| |||||||||||||||||||| |||| |||||    
T  36547253 ttgcatatattatacattatccttaccaactgagctaagctcaca 36547297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 40967372 - 40967432
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||  |||| || |||||||||||||||||| |||||| ||||||||||||| ||||    
T  40967372 ggtttgaacctcaaaccttgcatatattatgcattgtccttatcaactgagttaagctcac 40967432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2257014 - 2256971
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  2257014 ttgcatatattatgcattgtccataccaactgagttaagctcac 2256971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 2661070 - 2661109
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||| |||||||||||||||||||| ||||    
T  2661070 atatattatgcattgtccttaccaactgagttaagctcac 2661109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 5676782 - 5676739
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  5676782 ttgcatatattatgcattgtcattaccaactgagttaagctcac 5676739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15654887 - 15654930
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| ||||||||||||||||||||||||| |||| ||||    
T  15654887 ttgcatattttatgcattatccttaccaactgagctaagctcac 15654930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 18231491 - 18231534
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  18231491 ttgcatatattatgcattgtccttaccaactgagctaagctcac 18231534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 19179068 - 19179111
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  19179068 ttgcatatattatgcattgtccttaccaactgagctaagctcac 19179111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 24593419 - 24593376
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  24593419 ttgcatatattatgcattgtccttaccaactgagctaagctcac 24593376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 31815905 - 31815948
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  31815905 ttgcatatattatgcattgtccctaccaactgagttaagctcac 31815948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 32091189 - 32091232
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||    
T  32091189 ttgcatatattatgcattttccttaccaattgagttaagctcac 32091232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 34977247 - 34977204
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  34977247 ttgcatatattatgcattgtccataccaactgagttaagctcac 34977204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 35727480 - 35727437
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| | |||||||||||||||||| ||||    
T  35727480 ttgcatatattatgcattgttcttaccaactgagttaagctcac 35727437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 37320535 - 37320578
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  37320535 ttgcatatattatgcattgtctttaccaactgagttaagctcac 37320578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 39088817 - 39088860
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  39088817 ttgcatatattatgcattgtctttaccaactgagttaagttcac 39088860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 42372173 - 42372212
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||| |||||| ||||||||||||||||    
T  42372173 atatattatgcattattcttaccgactgagttaagatcac 42372212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 5168597 - 5168635
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||||||| || |||||||||||||    
T  5168597 ttgcatatattatgcattatccctatcaactgagttaag 5168635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 6141263 - 6141217
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacata 64  Q
    |||||||||||||||||| ||||||||||||||| |||  |||||||    
T  6141263 ttgcatatattatgcattgtccttaccaactgagataaactcacata 6141217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Original strand, 7379625 - 7379667
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| |||||| |||||||||||||||||||||| ||||    
T  7379625 tgcatataatatgcaatatccttaccaactgagttaagctcac 7379667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 12124727 - 12124689
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  12124727 ttgcatatattatgcattgtccttaccaactgagctaag 12124689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 15462920 - 15462882
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  15462920 ttgcatatattatgcattgtccataccaactgagttaag 15462882  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 52
Target Start/End: Complemental strand, 26400794 - 26400760
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagt 52  Q
    |||||||||||||||||| ||||||||||||||||    
T  26400794 ttgcatatattatgcattgtccttaccaactgagt 26400760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 27314910 - 27314864
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacata 64  Q
    |||||||| ||||||||| | |||||||||||||||||| |||||||    
T  27314910 ttgcatattttatgcattgttcttaccaactgagttaagctcacata 27314864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 40099401 - 40099439
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  40099401 ttgcatatattatgcattgtccttaccaactgagctaag 40099439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 43117191 - 43117241
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgag 51  Q
    |||||||  |||| || |||||||||||||||||| |||||||||||||||    
T  43117191 ggtttgaacctcagaccttgcatatattatgcattgtccttaccaactgag 43117241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 12124588 - 12124555
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  12124588 ttgcatatattatgcattgtccttaccaactgag 12124555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 47
Target Start/End: Complemental strand, 12231920 - 12231891
Alignment:
Q  18 ttgcatatattatgcattatccttaccaac 47  Q
    ||||||||||||||||||||||||||||||    
T  12231920 ttgcatatattatgcattatccttaccaac 12231891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 13000725 - 13000684
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||||||||| |||| |||||    
T  13000725 catatattatgcattatctttaccaactgagctaagctcaca 13000684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 14925250 - 14925287
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||| |||| |||||||||||||||||||    
T  14925250 ttgcatatattatacattgtccttaccaactgagttaa 14925287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 21482537 - 21482570
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    ||||||||||||| ||||||||||||||||||||    
T  21482537 ttgcatatattatacattatccttaccaactgag 21482570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 22267556 - 22267519
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  22267556 ttgcatatattatgcattgtccgtaccaactgagttaa 22267519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 21 - 62
Target Start/End: Complemental strand, 28644565 - 28644524
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||| ||| |||||||||||||||| |||||    
T  28644565 catatattatgcattgtccctaccaactgagttaagctcaca 28644524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 28771625 - 28771592
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  28771625 ttgcatatattatgcattgtccttaccaactgag 28771592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 35685079 - 35685112
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  35685079 ttgcatatattatgcattgtccttaccaactgag 35685112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 4056833 - 4056789
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||||||||||| ||| |||| |||||    
T  4056833 ttgcatatattatgcattgtccttaccaaccgagctaagctcaca 4056789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 10723999 - 10723939
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||  |||| || ||||||||||||||||||| ||  ||||||||||||||| ||||    
T  10723999 ggtttgaacctcagaccttgcatatattatgcattacccaaaccaactgagttaagctcac 10723939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Complemental strand, 12353698 - 12353662
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||| |||||||||| ||||||||    
T  12353698 tgcatatattatgcattgtccttaccaattgagttaa 12353662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 22 - 62
Target Start/End: Original strand, 13100286 - 13100326
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||||||  ||||||||||||||| |||||    
T  13100286 atatattatgcattatccaaaccaactgagttaagctcaca 13100326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 19095162 - 19095130
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    ||||||||||| |||||||||||||||||||||    
T  19095162 ttgcatatattctgcattatccttaccaactga 19095130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 22608587 - 22608527
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||  ||||||| |||||||||||||||||| ||  ||||||||||| |||| ||||    
T  22608587 ggtttgaacctcataccttgcatatattatgcattgtctctaccaactgagctaagctcac 22608527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #53
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 54
Target Start/End: Complemental strand, 34376929 - 34376893
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagtta 54  Q
    |||||||| ||||||| ||||||||||||||||||||    
T  34376929 ttgcatattttatgcaatatccttaccaactgagtta 34376893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #54
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 36264497 - 36264541
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||||||| |||||| ||| ||||| |||||    
T  36264497 ttgcatatattatgcattatccataccaattgaattaagctcaca 36264541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #55
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 38835258 - 38835302
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| |||||||||||| || |||| |||||    
T  38835258 ttgcatatattatgcattgtccttaccaacttagctaagttcaca 38835302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #56
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 41165495 - 41165435
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||  ||||||| ||  |||||||||||||||||| || ||||||||||||| ||||    
T  41165495 ggtttgaacctcataccttatatatattatgcattatccataacaactgagttaagctcac 41165435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #57
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 23 - 55
Target Start/End: Complemental strand, 42778657 - 42778625
Alignment:
Q  23 tatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||| |||||||||||||||||||    
T  42778657 tatattatgcattgtccttaccaactgagttaa 42778625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #58
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 45032753 - 45032693
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| |||| |  |||||||||||||||||| ||| ||||||||||| |||| ||||    
T  45032753 ggtttgagcctcagatcttgcatatattatgcattgtccctaccaactgaggtaagctcac 45032693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 38; Significance: 0.000000000002; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 18 - 63
Target Start/End: Original strand, 37230046 - 37230091
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacat 63  Q
    |||||||||||||||||| |||||||||||||||||||| ||||||    
T  37230046 ttgcatatattatgcattttccttaccaactgagttaagctcacat 37230091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 9 - 61
Target Start/End: Complemental strand, 35763757 - 35763705
Alignment:
Q  9 tctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||| |||||||||||||||||| ||||||| |||||||||||| ||||    
T  35763757 tctcatactttgcatatattatgcattgtccttacgaactgagttaagctcac 35763705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 3584264 - 3584209
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||| |||| ||| |||||||||||||||||| |||||||||||| |||||||    
T  3584264 ggtttgaatctcgtaccttgcatatattatgcattgtccttaccaactaagttaag 3584209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 21322218 - 21322175
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| ||||||||||||||||||||||||||||||| ||||    
T  21322218 ttgcatacattatgcattatccttaccaactgagttaagctcac 21322175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 44941431 - 44941469
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||||||| ||||||||||||||||    
T  44941431 ttgcatatattatgcattatccctaccaactgagttaag 44941469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 39458562 - 39458599
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||||| |||||||||||||||    
T  39458562 ttgcatatattatgcattatccctaccaactgagttaa 39458599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 5833086 - 5833042
Alignment:
Q  17 attgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||| ||||||||||| |||| ||||    
T  5833086 attgcatatattatgcattatccctaccaactgagctaagctcac 5833042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 8615066 - 8615022
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||    
T  8615066 ttgcatatattatgcattgtccttaccaactgagctaagctcaca 8615022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 22991409 - 22991453
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| |||||||||||||||| |||||    
T  22991409 ttgcatatattatgcattgtccataccaactgagttaagctcaca 22991453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 24991824 - 24991780
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||    
T  24991824 ttgcatatattatgcattgtccttaccaactgagctaagctcaca 24991780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 28012635 - 28012675
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| |||||||||||||||||||| ||||    
T  28012635 catatattatgcattgtccttaccaactgagttaagctcac 28012675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 34000302 - 34000262
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||| ||||||||||||| ||||    
T  34000302 catatattatgcattatccttatcaactgagttaagctcac 34000262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 2916145 - 2916102
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  2916145 ttgcatatattatgcattgtccgtaccaactgagttaaggtcac 2916102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 7872766 - 7872809
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  7872766 ttgcatatattatgcattgtccttaccaactgagctaagttcac 7872809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 21050240 - 21050283
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  21050240 ttgcatatattatgcattgtccttaccaactgagctaagctcac 21050283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 22 - 61
Target Start/End: Original strand, 21164780 - 21164819
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||| ||||    
T  21164780 atatattatgcattatccataccaactgagttaagctcac 21164819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 57
Target Start/End: Original strand, 23413064 - 23413103
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaaga 57  Q
    |||||||||||||||||| ||| |||||||||||||||||    
T  23413064 ttgcatatattatgcattgtccataccaactgagttaaga 23413103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 26816682 - 26816725
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||    
T  26816682 ttgcatatattatgcattatccctaccaactgagctaagctcac 26816725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 27263384 - 27263341
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  27263384 ttgcatatattatgcattgtccataccaactgagttaagttcac 27263341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 27270278 - 27270235
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  27270278 ttgcatatattatgcattgtccataccaactgagttaagttcac 27270235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 46987129 - 46987086
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  46987129 ttgcatatattatgcattgtccttaccaactgagctaagctcac 46987086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 48007565 - 48007608
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| || ||||||||||||||||| ||||    
T  48007565 ttgcatatattatgcattgtcattaccaactgagttaagctcac 48007608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 64
Target Start/End: Complemental strand, 6384894 - 6384848
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacata 64  Q
    |||||||||||||||||| ||||||  |||||||||||| |||||||    
T  6384894 ttgcatatattatgcattgtccttattaactgagttaagctcacata 6384848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 10362322 - 10362360
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| |||||| |||||||||||||    
T  10362322 ttgcatatattatgcattctccttatcaactgagttaag 10362360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 18714491 - 18714453
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||| ||||    
T  18714491 ttgcatatattatgcattgtccttaccaactgagctaag 18714453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 34568351 - 34568389
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||||||||||||||| |||||||| ||||    
T  34568351 ttgcatatattatgcattatccttatcaactgagctaag 34568389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 35666349 - 35666303
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||| ||||||||||||||| ||||||||||| |||||||| ||||    
T  35666349 acattacatatattatgcattgtccttaccaaccgagttaagctcac 35666303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 19 - 61
Target Start/End: Complemental strand, 37930086 - 37930044
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||| ||||||||||||||| |||| ||||    
T  37930086 tgcatatattatgcattgtccttaccaactgagataagctcac 37930044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Original strand, 39926553 - 39926599
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| |||||| |||||||| |||| ||||    
T  39926553 acattgcatatattatgcattgtccttatcaactgagctaagctcac 39926599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 48837910 - 48837872
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  48837910 ttgcatatattatgcattatccataccaattgagttaag 48837872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 2618722 - 2618689
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  2618722 ttgcatatattatgcattgtccttaccaactgag 2618689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 4340170 - 4340137
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  4340170 ttgcatatattatgcattgtccttaccaactgag 4340137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 19 - 56
Target Start/End: Original strand, 6567416 - 6567453
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||| | ||||||||||||||||||||||    
T  6567416 tgcatatattatgtaatatccttaccaactgagttaag 6567453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 19599188 - 19599151
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  19599188 ttgcatatattatgcattgtccataccaactgagttaa 19599151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Original strand, 20103478 - 20103515
Alignment:
Q  24 atattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||| |||||||||||||||||||| ||||    
T  20103478 atattatgcattgtccttaccaactgagttaagctcac 20103515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 21105646 - 21105602
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||||    
T  21105646 ttgcatatattatgcattttccataccaactgagctaagctcaca 21105602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 25888943 - 25888899
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||  ||||||||||||||| |||| |||||    
T  25888943 ttgcatatattatgcatcgtccttaccaactgagctaagctcaca 25888899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 25923434 - 25923390
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||||||| ||| |||||| ||||| |||||    
T  25923434 ttgcatatattatgcattatccctactaactgatttaagctcaca 25923390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 55
Target Start/End: Original strand, 29461840 - 29461876
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||||| ||| |||||||||||||||    
T  29461840 tgcatatattatgcattgtccctaccaactgagttaa 29461876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30296376 - 30296332
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||| |||| ||||||||||||||| |||| |||||    
T  30296376 ttgcatatattatacattgtccttaccaactgagctaagctcaca 30296332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 50
Target Start/End: Complemental strand, 34773282 - 34773242
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactga 50  Q
    ||||||| |||||||||||||||||| ||| ||||||||||    
T  34773282 ctcataccttgcatatattatgcattgtccctaccaactga 34773242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 37864468 - 37864424
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| | ||||||||||||| |||| |||||    
T  37864468 ttgcatatattatgcattgtacttaccaactgagctaagctcaca 37864424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 20 - 56
Target Start/End: Complemental strand, 39043796 - 39043760
Alignment:
Q  20 gcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||| ||| ||||||||||||||||    
T  39043796 gcatatattatgcattgtccataccaactgagttaag 39043760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 40762220 - 40762268
Alignment:
Q  13 atacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||| |||||||||||||||||| ||||||||| ||||| |||| ||||    
T  40762220 ataccttgcatatattatgcattgtccttaccatctgagctaagctcac 40762268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 10 - 38
Target Start/End: Complemental strand, 41425273 - 41425245
Alignment:
Q  10 ctcatacattgcatatattatgcattatc 38  Q
    |||||||||||||||||||||||||||||    
T  41425273 ctcatacattgcatatattatgcattatc 41425245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 37; Significance: 0.000000000006; HSPs: 32)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 13 - 61
Target Start/End: Original strand, 37999433 - 37999481
Alignment:
Q  13 atacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||| |||||||||||||||||||||| |||||||||||||||| ||||    
T  37999433 ataccttgcatatattatgcattatccataccaactgagttaagctcac 37999481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 23816833 - 23816790
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||||||||||||||| |||| ||||    
T  23816833 ttgcatatattatgcattatccttaccaactgagctaagctcac 23816790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 8442505 - 8442543
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  8442505 ttgcatatattatgcattgtccttaccaactgagttaag 8442543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 55
Target Start/End: Original strand, 42575972 - 42576017
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||| ||||||||||||||||||||||||| |||| ||||||||||    
T  42575972 ctcaaacattgcatatattatgcattatccataccgactgagttaa 42576017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 15 - 55
Target Start/End: Original strand, 989592 - 989632
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||||||||||||| ||||||||| |||||||||||||||    
T  989592 acattgcatatattaggcattatccctaccaactgagttaa 989632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 13357442 - 13357502
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||  ||| ||| |||||||||||||||||| ||| |||||||||||||||| ||||    
T  13357442 ggtttgaacctcgtaccttgcatatattatgcattgtccataccaactgagttaagctcac 13357502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Complemental strand, 17704073 - 17704013
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| || || || |||||||||||||||||| ||||||||||||||| |||| ||||    
T  17704073 ggtttgaatcacagaccttgcatatattatgcattgtccttaccaactgagctaagctcac 17704013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30623336 - 30623292
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||||||||||||||| |||| |||||    
T  30623336 ttgcatatattatgcattgtccttaccaactgagctaagctcaca 30623292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 15079170 - 15079213
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||| |||||||||||||||| ||||    
T  15079170 ttgcatatattatgcattgtccctaccaactgagttaagctcac 15079213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 18942960 - 18942917
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||||||||| ||||||||||| |||| |||||    
T  18942960 tgcatatattatgcattatccctaccaactgagctaagctcaca 18942917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 19778108 - 19778065
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  19778108 ttgcatatattatgcattgtccttaccaactgagctaagctcac 19778065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 29186553 - 29186510
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactgagtt 53  Q
    ||||||| |||||||||||| ||||| |||||||||||||||||    
T  29186553 ctcataccttgcatatattacgcattgtccttaccaactgagtt 29186510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 33451367 - 33451410
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||||||| ||||||||||| |||| ||||    
T  33451367 ttgcatatattatgcattatccataccaactgagctaagctcac 33451410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 8146174 - 8146136
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||||||||||||||| ||||||| |||||    
T  8146174 ttgcatatattatgcattatccttatcaactgaattaag 8146136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 63
Target Start/End: Original strand, 8910002 - 8910044
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcacat 63  Q
    ||||||||||||||| ||||||||||||||| |||| ||||||    
T  8910002 catatattatgcattgtccttaccaactgagctaagctcacat 8910044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 8984512 - 8984550
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||| |||||||| ||||||||||||||||    
T  8984512 ttgcatatattatacattatccataccaactgagttaag 8984550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 13477946 - 13477900
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| |||||||||||| || |||| ||||    
T  13477946 acattgcatatattatgcattgtccttaccaactcagctaagctcac 13477900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 19701365 - 19701399
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||||| ||||||||||||    
T  19701365 catatattatgcattatccttatcaactgagttaa 19701399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 6447232 - 6447195
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  6447232 ttgcatatattatgcattgtccataccaactgagttaa 6447195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 7553722 - 7553685
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  7553722 ttgcatatattatgcattgtccctaccaactgagttaa 7553685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7869659 - 7869696
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| |||| ||||||||||||||    
T  7869659 ttgcatatattatgcattgtcctcaccaactgagttaa 7869696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 7968958 - 7968995
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| |||||||||||||| ||||    
T  7968958 ttgcatatattatgcattgtccttaccaactgaattaa 7968995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 13105137 - 13105100
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||| ||| |||||||||||||||    
T  13105137 ttgcatatattatgcattgtccctaccaactgagttaa 13105100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Original strand, 17806480 - 17806517
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    ||||| |||||||||||||| |||||||||||||||||    
T  17806480 ttgcaaatattatgcattattcttaccaactgagttaa 17806517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 34968598 - 34968565
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||||||| |||||||||||    
T  34968598 ttgcatatattatgcattatccataccaactgag 34968565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 37938538 - 37938505
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||||||| |||||||||||    
T  37938538 ttgcatatattatgcattatccataccaactgag 37938505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Original strand, 42208487 - 42208520
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  42208487 ttgcatatattatgcattgtccttaccaactgag 42208520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 56822 - 56866
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| |||||| ||||||||| |||||    
T  56822 ttgcatatattatgcattgtccataccaattgagttaagctcaca 56866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 50
Target Start/End: Complemental strand, 9067125 - 9067093
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactga 50  Q
    ||||||| |||||||||||||||||||||||||    
T  9067125 ttgcataaattatgcattatccttaccaactga 9067093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 9 - 61
Target Start/End: Original strand, 13272531 - 13272583
Alignment:
Q  9 tctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||| ||||| ||||||||||||||| ||| || ||||||||||||| ||||    
T  13272531 tctcagacattacatatattatgcattgtccatatcaactgagttaagttcac 13272583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 28219906 - 28219862
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||| ||||||||||||||||||| |||||||| |||| |||||    
T  28219906 ttgcaaatattatgcattatccttaacaactgagctaagctcaca 28219862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 30427774 - 30427730
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||| ||||||||||| |||| |||||    
T  30427774 ttgcatatattatgcattgtccataccaactgagctaagctcaca 30427730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0238 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 25432 - 25389
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  25432 ttgcatatattatgcattgtccttaccaactgagttaagctcac 25389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0126 (Bit Score: 36; Significance: 0.00000000003; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 34906 - 34949
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||||||||||||| ||||    
T  34906 ttgcatatattatgcattgtccttaccaactgagttaagctcac 34949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 36; Significance: 0.00000000003; HSPs: 32)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 8831250 - 8831207
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| |||||||||| |||||||||||||||||||||||||    
T  8831250 ttgcataaattatgcattgtccttaccaactgagttaagatcac 8831207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 15 - 61
Target Start/End: Complemental strand, 404209 - 404163
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||| |||||||||||| ||||||| ||||    
T  404209 acattgcatatattatgcattgtccttaccaactaagttaagctcac 404163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 31971572 - 31971534
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  31971572 ttgcatatattatgcattgtccttaccaactgagttaag 31971534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 3808119 - 3808179
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| ||||  || |||||||||||||||||| ||||||| |||||||||||| ||||    
T  3808119 ggtttgaatctcggaccttgcatatattatgcattgtccttactaactgagttaagttcac 3808179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 24438303 - 24438343
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||| |||||||||||||||||| ||||    
T  24438303 catatattatgcattattcttaccaactgagttaagttcac 24438343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 28757042 - 28757086
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||| |||| |||||||||||||||||||| |||||    
T  28757042 ttgcatatattatacattgtccttaccaactgagttaagctcaca 28757086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 28898896 - 28898856
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| |||||||||||| ||||||||||||    
T  28898896 catatattatgcattgtccttaccaactaagttaagatcac 28898856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 19 - 62
Target Start/End: Complemental strand, 361796 - 361753
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    ||||||||||||||||| ||| |||||||||||||||| |||||    
T  361796 tgcatatattatgcattgtccataccaactgagttaagctcaca 361753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 788909 - 788866
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||||||| |||| ||||    
T  788909 ttgcatatattatgcattgtccttaccaactgagataagctcac 788866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 21 - 56
Target Start/End: Original strand, 6196552 - 6196587
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||||| ||||||||||||||||||||    
T  6196552 catatattatgcattgtccttaccaactgagttaag 6196587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 8834973 - 8834930
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| ||||||||||||||||| ||||||||||||| ||||    
T  8834973 ttgcatacattatgcattatccttatcaactgagttaagctcac 8834930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 13583592 - 13583549
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||| |||||||||||||||| |||||||| ||||    
T  13583592 ttgcatatattatacattatccttaccaaccgagttaagctcac 13583549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 13654267 - 13654224
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| || |||||||||||||||||||| ||||    
T  13654267 ttgcatatattatgcgttgtccttaccaactgagttaagctcac 13654224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 14679168 - 14679125
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| ||||||||||| |||||||| ||||    
T  14679168 ttgcatatattatgcattgtccttaccaaccgagttaagttcac 14679125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 33824924 - 33824881
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||| |||||||| |||||||||    
T  33824924 ttgcatatattatgcattgtccttatcaactgagctaagatcac 33824881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 2726435 - 2726473
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||| ||||||||||||||||    
T  2726435 ttgcatatattatgcattgtccataccaactgagttaag 2726473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 56
Target Start/End: Original strand, 4922418 - 4922464
Alignment:
Q  10 ctcatacattgcatatattatgcattatccttaccaactgagttaag 56  Q
    ||||||| ||||||||||||| |||||||| |||||||| |||||||    
T  4922418 ctcatacgttgcatatattatacattatccctaccaactaagttaag 4922464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Complemental strand, 9977100 - 9977062
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||||||| |||||| |||||||||    
T  9977100 ttgcatatattatgcattatccataccaattgagttaag 9977062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 23 - 56
Target Start/End: Complemental strand, 12319283 - 12319250
Alignment:
Q  23 tatattatgcattatccttaccaactgagttaag 56  Q
    ||||||||||||| ||||||||||||||||||||    
T  12319283 tatattatgcattgtccttaccaactgagttaag 12319250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 55
Target Start/End: Complemental strand, 13655200 - 13655167
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||| |||||||||||||||||||    
T  13655200 atatattatgcattgtccttaccaactgagttaa 13655167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 21047785 - 21047740
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacat 63  Q
    ||||||||| ||||||||||||||||||  ||||||||| ||||||    
T  21047785 ttgcatatactatgcattatccttaccagatgagttaagctcacat 21047740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 21095570 - 21095525
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcacat 63  Q
    ||||||||| ||||||||||||||||||  ||||||||| ||||||    
T  21095570 ttgcatatactatgcattatccttaccagatgagttaagctcacat 21095525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 26522511 - 26522470
Alignment:
Q  22 atatattatgcattatccttaccaactgagttaagatcacat 63  Q
    |||||||||||||| ||||||||||||||| |||| ||||||    
T  26522511 atatattatgcattgtccttaccaactgagctaagctcacat 26522470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 1 - 61
Target Start/End: Original strand, 331887 - 331947
Alignment:
Q  1 ggtttgagtctcatacattgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||| || || || |||||||||||||||||| ||  |||||||||||||||| ||||    
T  331887 ggtttgaatcccaaaccttgcatatattatgcattgtctctaccaactgagttaagctcac 331947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 19 - 63
Target Start/End: Complemental strand, 361208 - 361164
Alignment:
Q  19 tgcatatattatgcattatccttaccaactgagttaagatcacat 63  Q
    |||||||| |||||| ||||| |||||||||||||||| ||||||    
T  361208 tgcatataatatgcaatatccctaccaactgagttaagctcacat 361164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 3863351 - 3863395
Alignment:
Q  18 ttgcatatatta-tgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||| |||||| |||||||||||||||||||| ||||    
T  3863351 ttgcatatattaatgcattgtccttaccaactgagttaagctcac 3863395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 7273094 - 7273050
Alignment:
Q  18 ttgcatatattatgcattatcc-ttaccaactgagttaagatcac 61  Q
    ||||||||||||| |||||||| ||||||||||||||||| ||||    
T  7273094 ttgcatatattattcattatcccttaccaactgagttaagctcac 7273050  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Complemental strand, 9987121 - 9987081
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||| |||||||| |||||||||||||||||||| ||||    
T  9987121 catataatatgcattgtccttaccaactgagttaagctcac 9987081  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 10497173 - 10497213
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| ||||||| |||||||||||| ||||    
T  10497173 catatattatgcattgtccttacaaactgagttaagttcac 10497213  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 18254119 - 18254163
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||| ||||||||||| ||||||||||||||| |||| |||||    
T  18254119 ttgcatgtattatgcattgtccttaccaactgagctaagctcaca 18254163  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 12 - 56
Target Start/End: Original strand, 24212551 - 24212595
Alignment:
Q  12 catacattgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||| ||||||||||||||| ||| || |||||||||||||    
T  24212551 catacattacatatattatgcattgtccatatcaactgagttaag 24212595  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 15 - 51
Target Start/End: Original strand, 26521130 - 26521166
Alignment:
Q  15 acattgcatatattatgcattatccttaccaactgag 51  Q
    |||||| |||||||||||||| |||||||||||||||    
T  26521130 acattgtatatattatgcattgtccttaccaactgag 26521166  T

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Target: scaffold0027 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0027
Description:

Target: scaffold0027; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 21 - 61
Target Start/End: Original strand, 61591 - 61631
Alignment:
Q  21 catatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||| ||||||||||||||||||||||||||||||| ||||    
T  61591 catacattatgcattatccttaccaactgagttaagctcac 61631  T

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Target: scaffold0533 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0533
Description:

Target: scaffold0533; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 8869 - 8912
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||||| |||||||||| ||||||||| ||||    
T  8869 ttgcatatattatgcattgtccttaccaattgagttaagctcac 8912  T

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Target: scaffold0007 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0007
Description:

Target: scaffold0007; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Complemental strand, 1614 - 1571
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||||||||| |||| ||||||||||||||||| ||||    
T  1614 ttgcatatattatgcactatcgttaccaactgagttaagctcac 1571  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 18 - 61
Target Start/End: Original strand, 91580 - 91623
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||||||||||||| |||||||| |||| ||||    
T  91580 ttgcatatattatgcattatccttaacaactgagctaagctcac 91623  T

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Target: scaffold0070 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 42950 - 42988
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||||| |||| |||||||||||||    
T  42950 ttgcatatattatgcattattcttatcaactgagttaag 42988  T

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Target: scaffold0012 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 119972 - 120010
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  119972 ttgcatatattatgcattgtccttaccaaccgagttaag 120010  T

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Target: scaffold0006 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 18 - 56
Target Start/End: Original strand, 210096 - 210134
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaag 56  Q
    |||||||||||||||||| ||||||||||| ||||||||    
T  210096 ttgcatatattatgcattgtccttaccaaccgagttaag 210134  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 55
Target Start/End: Complemental strand, 48064 - 48027
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaa 55  Q
    |||||||||||||||||||| |||| ||||||||||||    
T  48064 ttgcatatattatgcattatgcttatcaactgagttaa 48027  T

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Target: scaffold0074 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 24 - 61
Target Start/End: Complemental strand, 45032 - 44995
Alignment:
Q  24 atattatgcattatccttaccaactgagttaagatcac 61  Q
    |||||||||| |||||||||||||||||||||| ||||    
T  45032 atattatgcactatccttaccaactgagttaagctcac 44995  T

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Target: scaffold0026 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0026
Description:

Target: scaffold0026; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 75368 - 75335
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  75368 ttgcatatattatgcattgtccttaccaactgag 75335  T

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Target: scaffold0005 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 239850 - 239817
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgag 51  Q
    |||||||||||||||||| |||||||||||||||    
T  239850 ttgcatatattatgcattgtccttaccaactgag 239817  T

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Target: scaffold0044 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Original strand, 42352 - 42396
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||||||||||||| ||||| ||||||||| |||| |||||    
T  42352 ttgcatatattatgcattgtccttcccaactgagctaagctcaca 42396  T

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Target: scaffold0021 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 18 - 62
Target Start/End: Complemental strand, 161184 - 161140
Alignment:
Q  18 ttgcatatattatgcattatccttaccaactgagttaagatcaca 62  Q
    |||||||| ||||||||| ||| |||||||||||||||| |||||    
T  161184 ttgcatattttatgcattgtccataccaactgagttaagctcaca 161140  T

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Target: scaffold0015 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0015
Description:

Target: scaffold0015; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 25 - 61
Target Start/End: Complemental strand, 75219 - 75183
Alignment:
Q  25 tattatgcattatccttaccaactgagttaagatcac 61  Q
    ||||||||||||||| |||||||||||||||| ||||    
T  75219 tattatgcattatccataccaactgagttaagctcac 75183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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