View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20866_low_3 (Length: 325)

Name: NF20866_low_3
Description: NF20866
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20866_low_3
NF20866_low_3
[»] chr6 (20 HSPs)
chr6 (17-325)||(1794687-1794999)
chr6 (280-325)||(16125029-16125074)
chr6 (276-316)||(28758289-28758329)
chr6 (267-325)||(29069496-29069554)
chr6 (276-325)||(13496129-13496178)
chr6 (276-325)||(24623316-24623365)
chr6 (278-314)||(3358415-3358451)
chr6 (278-325)||(8138459-8138506)
chr6 (276-314)||(15187087-15187125)
chr6 (276-314)||(15473481-15473519)
chr6 (295-325)||(26611058-26611088)
chr6 (277-314)||(8637437-8637474)
chr6 (276-325)||(9111060-9111109)
chr6 (276-325)||(9392667-9392716)
chr6 (277-314)||(31971553-31971590)
chr6 (274-314)||(404187-404227)
chr6 (279-315)||(2105928-2105964)
chr6 (277-325)||(2692228-2692276)
chr6 (274-314)||(3808115-3808155)
chr6 (278-314)||(16390453-16390489)
[»] scaffold0160 (1 HSPs)
scaffold0160 (269-325)||(22924-22980)
[»] chr8 (23 HSPs)
chr8 (276-325)||(9192226-9192275)
chr8 (276-325)||(19260578-19260627)
chr8 (284-325)||(37750006-37750047)
chr8 (279-323)||(28436549-28436593)
chr8 (274-317)||(33105412-33105455)
chr8 (276-314)||(9241039-9241077)
chr8 (275-325)||(13284263-13284313)
chr8 (279-325)||(24195262-24195308)
chr8 (279-325)||(27134422-27134468)
chr8 (277-319)||(41603080-41603122)
chr8 (280-325)||(4263828-4263873)
chr8 (276-325)||(12748914-12748963)
chr8 (276-325)||(30218216-30218265)
chr8 (276-325)||(31085863-31085912)
chr8 (280-325)||(37938508-37938553)
chr8 (292-325)||(40316869-40316902)
chr8 (295-323)||(3456839-3456867)
chr8 (283-315)||(12701003-12701035)
chr8 (277-325)||(13272522-13272570)
chr8 (283-319)||(21557452-21557488)
chr8 (277-325)||(24696006-24696054)
chr8 (278-314)||(42208470-42208506)
chr8 (289-325)||(42367742-42367778)
[»] chr7 (16 HSPs)
chr7 (277-325)||(43539104-43539152)
chr7 (276-325)||(18773755-18773804)
chr7 (276-325)||(23198748-23198797)
chr7 (280-320)||(44868158-44868198)
chr7 (279-325)||(1261188-1261234)
chr7 (276-314)||(8237631-8237669)
chr7 (276-314)||(27833400-27833438)
chr7 (276-325)||(19599158-19599207)
chr7 (284-325)||(20205835-20205876)
chr7 (276-325)||(27462435-27462484)
chr7 (277-325)||(34722020-34722069)
chr7 (276-325)||(35142148-35142197)
chr7 (276-325)||(41250046-41250095)
chr7 (277-325)||(10244740-10244788)
chr7 (275-323)||(12167422-12167470)
chr7 (291-323)||(35751385-35751417)
[»] chr3 (14 HSPs)
chr3 (277-325)||(24428473-24428521)
chr3 (270-319)||(28965770-28965819)
chr3 (276-319)||(22722421-22722464)
chr3 (295-325)||(4033433-4033463)
chr3 (276-314)||(7464490-7464528)
chr3 (276-314)||(20296318-20296356)
chr3 (275-325)||(21160065-21160115)
chr3 (296-325)||(23332663-23332692)
chr3 (276-325)||(31463497-31463546)
chr3 (280-325)||(33404241-33404286)
chr3 (276-325)||(38130958-38131007)
chr3 (276-316)||(14160277-14160317)
chr3 (281-325)||(47040898-47040942)
chr3 (278-314)||(52453258-52453294)
[»] chr4 (35 HSPs)
chr4 (278-325)||(9783912-9783959)
chr4 (276-325)||(19479476-19479525)
chr4 (274-319)||(32923200-32923245)
chr4 (276-325)||(40070967-40071016)
chr4 (274-314)||(29568610-29568650)
chr4 (277-325)||(43722778-43722826)
chr4 (279-314)||(23160064-23160099)
chr4 (278-325)||(48223580-48223627)
chr4 (271-325)||(897438-897492)
chr4 (276-325)||(19587852-19587902)
chr4 (275-325)||(20383501-20383551)
chr4 (275-325)||(50668353-50668403)
chr4 (276-314)||(56551591-56551629)
chr4 (276-325)||(3936640-3936689)
chr4 (276-325)||(8607140-8607189)
chr4 (276-325)||(10564464-10564513)
chr4 (276-325)||(11300688-11300737)
chr4 (276-325)||(11949762-11949811)
chr4 (276-325)||(14202478-14202527)
chr4 (276-325)||(22164268-22164317)
chr4 (276-317)||(39606566-39606607)
chr4 (276-325)||(43034341-43034390)
chr4 (276-325)||(49041980-49042029)
chr4 (280-325)||(50380839-50380884)
chr4 (274-314)||(675942-675982)
chr4 (289-325)||(6459936-6459972)
chr4 (277-325)||(8415495-8415543)
chr4 (277-325)||(22040663-22040711)
chr4 (276-316)||(25198260-25198300)
chr4 (276-324)||(36479005-36479053)
chr4 (278-314)||(37735813-37735849)
chr4 (275-315)||(49281176-49281215)
chr4 (270-314)||(49473669-49473713)
chr4 (279-323)||(49952571-49952615)
chr4 (279-323)||(54677240-54677284)
[»] chr2 (13 HSPs)
chr2 (274-325)||(25186239-25186290)
chr2 (270-325)||(28202310-28202365)
chr2 (280-325)||(3196573-3196618)
chr2 (276-325)||(29734704-29734753)
chr2 (270-314)||(43117183-43117227)
chr2 (280-322)||(35728915-35728957)
chr2 (277-314)||(4557771-4557808)
chr2 (277-325)||(3904215-3904263)
chr2 (280-324)||(4509551-4509595)
chr2 (276-324)||(12413507-12413555)
chr2 (276-324)||(12425567-12425615)
chr2 (274-318)||(27889309-27889353)
chr2 (277-325)||(43356542-43356590)
[»] chr5 (17 HSPs)
chr5 (279-325)||(22394048-22394094)
chr5 (276-325)||(29695028-29695077)
chr5 (277-325)||(16579374-16579422)
chr5 (271-314)||(4763180-4763223)
chr5 (276-323)||(40715948-40715995)
chr5 (275-325)||(5614778-5614828)
chr5 (276-325)||(5107244-5107293)
chr5 (276-325)||(13864357-13864406)
chr5 (276-325)||(26409266-26409315)
chr5 (276-325)||(26655477-26655526)
chr5 (276-325)||(26927062-26927111)
chr5 (276-325)||(31602824-31602873)
chr5 (276-325)||(34767187-34767236)
chr5 (292-325)||(40730210-40730243)
chr5 (274-323)||(43406695-43406744)
chr5 (277-325)||(18589867-18589915)
chr5 (276-324)||(22522800-22522848)
[»] chr1 (23 HSPs)
chr1 (276-314)||(33153879-33153917)
chr1 (276-325)||(26803450-26803499)
chr1 (270-323)||(28798742-28798795)
chr1 (276-314)||(6000142-6000180)
chr1 (283-325)||(15382825-15382867)
chr1 (275-325)||(16475911-16475961)
chr1 (279-325)||(16967196-16967242)
chr1 (276-314)||(18166626-18166664)
chr1 (279-325)||(52262168-52262214)
chr1 (276-325)||(3693795-3693844)
chr1 (278-315)||(7996690-7996727)
chr1 (276-325)||(12268983-12269032)
chr1 (267-316)||(15668520-15668569)
chr1 (277-325)||(15892810-15892859)
chr1 (276-325)||(17221519-17221568)
chr1 (279-320)||(23045209-23045250)
chr1 (276-325)||(25532986-25533035)
chr1 (280-325)||(28832174-28832219)
chr1 (277-325)||(24695572-24695620)
chr1 (275-323)||(30799262-30799310)
chr1 (274-314)||(33020040-33020080)
chr1 (278-314)||(39492345-39492381)
chr1 (276-312)||(49431992-49432028)
[»] scaffold0053 (1 HSPs)
scaffold0053 (274-325)||(11858-11909)
[»] scaffold1127 (1 HSPs)
scaffold1127 (274-316)||(1162-1204)
[»] scaffold0181 (1 HSPs)
scaffold0181 (284-322)||(12268-12306)
[»] scaffold0334 (1 HSPs)
scaffold0334 (275-319)||(5201-5245)
[»] scaffold0019 (1 HSPs)
scaffold0019 (276-316)||(48669-48709)


Alignment Details
Target: chr6 (Bit Score: 140; Significance: 3e-73; HSPs: 20)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 140; E-Value: 3e-73
Query Start/End: Original strand, 17 - 325
Target Start/End: Original strand, 1794687 - 1794999
Alignment:
Q  17 attaactaccaaaagtggaatggtccactggtaagagacatgagtcccttaaatatgtggttaggggttcgatttttggctaatgcat--atnnnnnnnt 114  Q
    ||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||  |             
T  1794687 attaactaccaaaagtggaatggtccagtggcaagagacatgagtcccttaaatatgtggttaggggttcgatttttggctcatgcatacaaaaaaaaaa 1794786  T
Q  115 ttgattgagaaaagagaacccacctcatatcaatattatggtaatccaa-tnnnnnnngcatgcacttaactgttcaaacctca--tcttacatatttaa 211  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||          |||||||||||||||||||||||||  ||||||||||||||    
T  1794787 ttgattgagagaagagaacccacctcatatcaatattatggtaatccaacaaaaacaaacatgcacttaactgttcaaacctcatctcttacatatttaa 1794886  T
Q  212 tgtccttaccagctaaattatgttcaaaaagacaacattaataacnnnnnnnnnngtagtgactggggtttgaacctcggactttacatatattatgcat 311  Q
    ||||||||||||||||||| |||||||||||||||| ||||| |           |||||| ||||| ||| |||||||||| |||||||||||||||||    
T  1794887 tgtccttaccagctaaattttgttcaaaaagacaacgttaatga-ttttttttttgtagtggctgggttttaaacctcggaccttacatatattatgcat 1794985  T
Q  312 tgttcatatcaact 325  Q
    ||| ||||||||||    
T  1794986 tgtccatatcaact 1794999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 16125029 - 16125074
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||||||| |||||||||||||||||||||| |||||    
T  16125029 tttgaacctcggactttgcatatattatgcattgttcataccaact 16125074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 28758289 - 28758329
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttc 316  Q
    ||||||||||||||||||||| |||||||||||||||||||    
T  28758289 ggggtttgaacctcggactttgcatatattatgcattgttc 28758329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 267 - 325
Target Start/End: Complemental strand, 29069554 - 29069496
Alignment:
Q  267 gtagtgactggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| | |||||||||||||| |||||| ||||||||||||||||| | ||||||||    
T  29069554 gtagtggccggggtttgaacctcagacttttcatatattatgcattgtccctatcaact 29069496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 13496178 - 13496129
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||  ||||| || ||||||||||||||||||||||||||||    
T  13496178 ggggtttgaactccggaccttgcatatattatgcattgttcatatcaact 13496129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 24623316 - 24623365
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| || || |||||||||||||||||||| ||||||||||    
T  24623316 ggggtttgaaccccgaaccttacatatattatgcattgtccatatcaact 24623365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 3358451 - 3358415
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||||||||||| |||||||||||||||||    
T  3358451 ggtttgaacctcggactttgcatatattatgcattgt 3358415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 325
Target Start/End: Original strand, 8138459 - 8138506
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||| | ||| |||||||||||||||||||||| ||||||||    
T  8138459 ggtttgaaccccagaccttacatatattatgcattgttcttatcaact 8138506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 15187125 - 15187087
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||||| || |||||||||||||||||    
T  15187125 ggggtttgaacctcggaccttgcatatattatgcattgt 15187087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 15473481 - 15473519
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||||| || |||||||||||||||||    
T  15473481 ggggtttgaacctcggaccttgcatatattatgcattgt 15473519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Original strand, 26611058 - 26611088
Alignment:
Q  295 ttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||||||||||||||||||||    
T  26611058 ttacatatattatgcattgttcatatcaact 26611088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 8637437 - 8637474
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||||||||| || |||||||||||||||||    
T  8637437 gggtttgaacctcggaccttgcatatattatgcattgt 8637474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 9111109 - 9111060
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||| ||||| || |||||||||||||||||||||| |||||    
T  9111109 ggggttcgaaccccggaccttgcatatattatgcattgttcataccaact 9111060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 9392667 - 9392716
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||| |||||||||| || ||||||||||||||| |||||| |||||    
T  9392667 ggggtttaaacctcggaccttgcatatattatgcatttttcataacaact 9392716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Complemental strand, 31971590 - 31971553
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||||||||| || |||||||||||||||||    
T  31971590 gggtttgaacctcggaccttgcatatattatgcattgt 31971553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 404227 - 404187
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||| ||||||||||| || |||||||||||||||||    
T  404227 ctggggttcgaacctcggacattgcatatattatgcattgt 404187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 315
Target Start/End: Complemental strand, 2105964 - 2105928
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgtt 315  Q
    |||||||||||| || |||||||||||||||||||||    
T  2105964 gtttgaacctcgaaccttacatatattatgcattgtt 2105928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 2692276 - 2692228
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||| ||||||  || ||||||||||||||||| ||||||||||    
T  2692276 gggtttgaatctcggatcttgcatatattatgcattgtccatatcaact 2692228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 3808115 - 3808155
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||| ||||||| || |||||||||||||||||    
T  3808115 ctggggtttgaatctcggaccttgcatatattatgcattgt 3808155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 16390489 - 16390453
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||| ||||| ||||||||||||||||||||    
T  16390489 ggtttgaaccccggaccttacatatattatgcattgt 16390453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0160 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 1)
Name: scaffold0160
Description:

Target: scaffold0160; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 269 - 325
Target Start/End: Complemental strand, 22980 - 22924
Alignment:
Q  269 agtgactggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| |||||||||||||||||| || ||||| ||||||||||||||||||||||    
T  22980 agtgaccggggtttgaacctcggaccttgcatattttatgcattgttcatatcaact 22924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 23)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 9192226 - 9192275
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| | ||||||||||||||||||||||||||||| |||||    
T  9192226 ggggtttgaaccccagactttacatatattatgcattgttcataccaact 9192275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 19260578 - 19260627
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| |||||||||||||||||||| ||||||||||    
T  19260578 ggggtttgaaccccggaccttacatatattatgcattgtacatatcaact 19260627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 284 - 325
Target Start/End: Original strand, 37750006 - 37750047
Alignment:
Q  284 aacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  37750006 aaccccggactttgcatatattatgcattgttcatatcaact 37750047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 28436549 - 28436593
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    |||||||| | |||||||||||||||||||||||||| |||||||    
T  28436549 gtttgaactttggactttacatatattatgcattgttgatatcaa 28436593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 317
Target Start/End: Complemental strand, 33105455 - 33105412
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgttca 317  Q
    |||||||||||||| ||||| || ||||||||||||||||||||    
T  33105455 ctggggtttgaaccccggaccttgcatatattatgcattgttca 33105412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 9241077 - 9241039
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||| |||||| ||||||||||||||||||||    
T  9241077 ggggtttgaacatcggaccttacatatattatgcattgt 9241039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 13284263 - 13284313
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||||  || ||| ||||||||| |||||||||||||||||    
T  13284263 tggggtttgaacctcaaaccttatatatattatacattgttcatatcaact 13284313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 24195308 - 24195262
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||| ||||| || ||||||||||| ||||||||||||||||    
T  24195308 gtttgaaccccggaccttgcatatattatgtattgttcatatcaact 24195262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 27134422 - 27134468
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||| |||||||| |||||||||| ||||||||||| |||||    
T  27134422 gtttgaaccccggactttgcatatattatacattgttcataccaact 27134468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 277 - 319
Target Start/End: Complemental strand, 41603122 - 41603080
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcata 319  Q
    ||||||||||| | ||| |||||||||||||||||||||||||    
T  41603122 gggtttgaaccccagaccttacatatattatgcattgttcata 41603080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 4263873 - 4263828
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| || |||| |||||||||||||| ||||||||    
T  4263873 tttgaacctcggaccttgcatacattatgcattgttcttatcaact 4263828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 12748963 - 12748914
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  12748963 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 12748914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 30218265 - 30218216
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||| |||  ||||| || ||||||||||||||||||||||||||||    
T  30218265 ggggtttaaactccggacattgcatatattatgcattgttcatatcaact 30218216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 31085863 - 31085912
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||| || ||||||| ||||||| ||||| |||||||||||||||||    
T  31085863 ggggtttaaatctcggaccttacatacattatacattgttcatatcaact 31085912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 37938553 - 37938508
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||||||| ||||||||||||||| | |||| |||||    
T  37938553 tttgaacctcggactttgcatatattatgcattatccataccaact 37938508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Complemental strand, 40316902 - 40316869
Alignment:
Q  292 actttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||||||||||| ||||||||||||    
T  40316902 actttacatatattatgcattattcatatcaact 40316869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 295 - 323
Target Start/End: Original strand, 3456839 - 3456867
Alignment:
Q  295 ttacatatattatgcattgttcatatcaa 323  Q
    |||||||||||||||||||||||||||||    
T  3456839 ttacatatattatgcattgttcatatcaa 3456867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 315
Target Start/End: Original strand, 12701003 - 12701035
Alignment:
Q  283 gaacctcggactttacatatattatgcattgtt 315  Q
    |||||||||||||| ||||||||||||||||||    
T  12701003 gaacctcggactttgcatatattatgcattgtt 12701035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 13272522 - 13272570
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| || ||| ||| |||||||||||||||||||| ||||||||||    
T  13272522 gggtttaaatctcagacattacatatattatgcattgtccatatcaact 13272570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 283 - 319
Target Start/End: Complemental strand, 21557488 - 21557452
Alignment:
Q  283 gaacctcggactttacatatattatgcattgttcata 319  Q
    ||||||||||| |||||||||||||||||||| ||||    
T  21557488 gaacctcggaccttacatatattatgcattgtccata 21557452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 24696006 - 24696054
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||| ||||||  || ||||||||||||||||| ||||||||||    
T  24696006 gggtttgaatctcggatcttgcatatattatgcattgtccatatcaact 24696054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 42208470 - 42208506
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||| || |||||||||||||||||    
T  42208470 ggtttgaacctcggaccttgcatatattatgcattgt 42208506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 325
Target Start/End: Complemental strand, 42367778 - 42367742
Alignment:
Q  289 cggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||| ||||||||||||||||||| ||||||||    
T  42367778 cggacttttcatatattatgcattgttcttatcaact 42367742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 37; Significance: 0.000000000007; HSPs: 16)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 43539104 - 43539152
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| ||||| |||||||||||||||||||||| ||||||||    
T  43539104 gggtttgaaccccggaccttacatatattatgcattgttcctatcaact 43539152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 18773755 - 18773804
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| |||||||| ||||||||||| ||||||||||    
T  18773755 ggggtttgaaccccggaccttacatattttatgcattgtccatatcaact 18773804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 23198748 - 23198797
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| |||||||| ||||| |||||||||||||||| |||||    
T  23198748 ggggtttgaaccccggactttgcatattttatgcattgttcataccaact 23198797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 280 - 320
Target Start/End: Original strand, 44868158 - 44868198
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatat 320  Q
    |||||||||||||| |||||||||||||||||||| |||||    
T  44868158 tttgaacctcggaccttacatatattatgcattgtccatat 44868198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 1261234 - 1261188
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||  ||||||||||||||||||||| ||||| |||||||||    
T  1261234 gtttgaactccggactttacatatattatgctttgtttatatcaact 1261188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 8237631 - 8237669
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||||||||  ||||||||||||||||    
T  8237631 ggggtttgaacctcggactttgtatatattatgcattgt 8237669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 27833400 - 27833438
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  27833400 ggggtttgaaccccggaccttacatatattatgcattgt 27833438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 19599207 - 19599158
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  19599207 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 19599158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 284 - 325
Target Start/End: Complemental strand, 20205876 - 20205835
Alignment:
Q  284 aacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||| |||||||||||||||||||||||||| |||| |||||    
T  20205876 aaccccggactttacatatattatgcattgtccataccaact 20205835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 27462435 - 27462484
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  27462435 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 27462484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 34722020 - 34722069
Alignment:
Q  277 gggtttgaacctcggactttacatat-attatgcattgttcatatcaact 325  Q
    ||||| ||||||||||| |||||||| ||||||||||||||||| |||||    
T  34722020 gggttcgaacctcggaccttacatattattatgcattgttcataccaact 34722069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 35142148 - 35142197
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| |||||||  ||||| ||||||||||||||||| ||||||||||    
T  35142148 ggggttcgaacctcaaactttgcatatattatgcattgtccatatcaact 35142197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 41250046 - 41250095
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||| ||||||||||||| || |||||||||| |||||||| ||||||||    
T  41250046 ggggcttgaacctcggaccttgcatatattatacattgttcttatcaact 41250095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 10244788 - 10244740
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  10244788 gggtttgaaccccggaccttgcatatattatgcattgtccataccaact 10244740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 323
Target Start/End: Complemental strand, 12167470 - 12167422
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    ||||||||||| | ||||| ||  |||||||||||||||||||||||||    
T  12167470 tggggtttgaatcccggaccttgaatatattatgcattgttcatatcaa 12167422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 291 - 323
Target Start/End: Original strand, 35751385 - 35751417
Alignment:
Q  291 gactttacatatattatgcattgttcatatcaa 323  Q
    |||||||||||||||||||||| ||||||||||    
T  35751385 gactttacatatattatgcattattcatatcaa 35751417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.000000000007; HSPs: 14)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 24428473 - 24428521
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  24428473 gggtttgaacctcggactttgcatatattatgcattgtccataccaact 24428521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 319
Target Start/End: Original strand, 28965770 - 28965819
Alignment:
Q  270 gtgactggggtttgaacctcggactttacatatattatgcattgttcata 319  Q
    ||||| |||||||||||| || || |||||||||||||||||||||||||    
T  28965770 gtgaccggggtttgaaccccgaaccttacatatattatgcattgttcata 28965819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 319
Target Start/End: Complemental strand, 22722464 - 22722421
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcata 319  Q
    |||||||||||||||||| || ||||| ||||||||||||||||    
T  22722464 ggggtttgaacctcggaccttgcatattttatgcattgttcata 22722421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 295 - 325
Target Start/End: Complemental strand, 4033463 - 4033433
Alignment:
Q  295 ttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||||||||||||||||||||    
T  4033463 ttacatatattatgcattgttcatatcaact 4033433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 7464490 - 7464528
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||| ||||| ||||||||||||||||||||    
T  7464490 ggggtttgaaccccggaccttacatatattatgcattgt 7464528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 20296356 - 20296318
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  20296356 ggggtttgaacatcggactttgcatatattatgcattgt 20296318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 21160115 - 21160065
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||| | ||| |||||||||||||||||| | ||||||||||    
T  21160115 tggggtttgaacccccgaccttacatatattatgcattatccatatcaact 21160065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 296 - 325
Target Start/End: Complemental strand, 23332692 - 23332663
Alignment:
Q  296 tacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||||||||||||||||||||    
T  23332692 tacatatattatgcattgttcatatcaact 23332663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 31463546 - 31463497
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| ||| |||||||||||||||||| ||  ||||||||    
T  31463546 ggggtttgaacctcagaccttacatatattatgcattatttctatcaact 31463497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 33404286 - 33404241
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||  ||||||||||||||||| ||||| ||||||||||    
T  33404286 tttgaacctcaaactttacatatattatgtattgtccatatcaact 33404241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 38130958 - 38131007
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  38130958 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 38131007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 14160277 - 14160317
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttc 316  Q
    |||||| ||||| |||||||| |||||||||||||||||||    
T  14160277 ggggttcgaaccccggactttgcatatattatgcattgttc 14160317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 281 - 325
Target Start/End: Original strand, 47040898 - 47040942
Alignment:
Q  281 ttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||| || || ||||||| |||||||||||||||||||||||    
T  47040898 ttgaaccccgaaccttacatacattatgcattgttcatatcaact 47040942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 314
Target Start/End: Original strand, 52453258 - 52453294
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||||| ||||| |||||||||||||||||    
T  52453258 ggtttgaacctcgaactttgcatatattatgcattgt 52453294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 36; Significance: 0.00000000003; HSPs: 35)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 278 - 325
Target Start/End: Complemental strand, 9783959 - 9783912
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||| |||||||||||||||||||| ||||||||||    
T  9783959 ggtttgaacctcagaccttacatatattatgcattgtccatatcaact 9783912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 19479476 - 19479525
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||||||||| ||||    
T  19479476 ggggtttgaaccccggaccttgcatatattatgcattgttcatattaact 19479525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 274 - 319
Target Start/End: Original strand, 32923200 - 32923245
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgttcata 319  Q
    |||||||||||||| || || |||||||||||||||||||||||||    
T  32923200 ctggggtttgaaccccgaaccttacatatattatgcattgttcata 32923245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 40070967 - 40071016
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| |||||| || |||||||||||||||||||||| |||||    
T  40070967 ggggtttgaacttcggaccttgcatatattatgcattgttcataccaact 40071016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 29568650 - 29568610
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  29568650 ctggggttcgaacctcggaccttacatatattatgcattgt 29568610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 43722826 - 43722778
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| ||||| |||||||||||||||||||| |||| |||||    
T  43722826 gggtttgaaccccggaccttacatatattatgcattgtccataccaact 43722778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 279 - 314
Target Start/End: Complemental strand, 23160099 - 23160064
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||||||| ||||||||||||||||||||    
T  23160099 gtttgaacctcggaccttacatatattatgcattgt 23160064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 278 - 325
Target Start/End: Complemental strand, 48223627 - 48223580
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||||| |||| |||||||||||||||||| || |||||    
T  48223627 ggtttgaacctcggattttaaatatattatgcattgttcttaccaact 48223580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 271 - 325
Target Start/End: Complemental strand, 897492 - 897438
Alignment:
Q  271 tgactggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||| |||||||||||| ||||| ||||||||||||| |||||| |||| |||||    
T  897492 tgacaggggtttgaaccccggaccttacatatattatacattgtccataccaact 897438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 19587902 - 19587852
Alignment:
Q  276 ggggtttgaacctcggactttacatata-ttatgcattgttcatatcaact 325  Q
    |||||||||||| ||||||| ||||||| ||||||||||||| ||||||||    
T  19587902 ggggtttgaaccccggacttgacatatatttatgcattgttcctatcaact 19587852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 20383551 - 20383501
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  20383551 tggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 20383501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 50668403 - 50668353
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||| || || |||||||||||||| |||||||||| |||||    
T  50668403 tggggtttgaaccccgaaccttacatatattatgtattgttcataccaact 50668353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 56551591 - 56551629
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||||| || |||||||||||||||||    
T  56551591 ggggtttgaacctcggaccttgcatatattatgcattgt 56551629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 3936689 - 3936640
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||| ||||| || |||||||||||||||||||||| |||||    
T  3936689 ggggttcgaaccccggaccttgcatatattatgcattgttcataccaact 3936640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 8607189 - 8607140
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||  ||||| ||||||| |||||||||||| ||||||||||    
T  8607189 ggggtttgaactccggaccttacatacattatgcattgtccatatcaact 8607140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 10564464 - 10564513
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| ||| |||||||||||||| ||||| |||| |||||    
T  10564464 ggggtttgaacctcagaccttacatatattatgtattgtccataccaact 10564513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 11300737 - 11300688
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||||||| |||||||| ||||||||  | ||||||||||    
T  11300737 ggggtttgaacctcggaccttacatatgttatgcataatccatatcaact 11300688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 11949762 - 11949811
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  11949762 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 11949811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 14202478 - 14202527
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| |||||||||||||||||| | || |||||||    
T  14202478 ggggtttgaaccccggaccttacatatattatgcattatccaaatcaact 14202527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 22164268 - 22164317
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| | ||| |||||||||||||||||||||| || |||||    
T  22164268 ggggtttgaaccccagaccttacatatattatgcattgttcctaccaact 22164317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 317
Target Start/End: Original strand, 39606566 - 39606607
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttca 317  Q
    ||||||||||||||| ||||||||||| |||| |||||||||    
T  39606566 ggggtttgaacctcgaactttacatattttatacattgttca 39606607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 43034341 - 43034390
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| ||| || ||||||||||||||||| |||| |||||    
T  43034341 ggggtttgaacctcagaccttgcatatattatgcattgtccataccaact 43034390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 49041980 - 49042029
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || |||||||||||||||||  |||||||||    
T  49041980 ggggtttgaaccccggaccttgcatatattatgcattgtctatatcaact 49042029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 50380839 - 50380884
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||  ||||| ||||||||||||||||||||||||| |||||    
T  50380839 tttgaactccggaccttacatatattatgcattgttcataccaact 50380884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Complemental strand, 675982 - 675942
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||| ||||| || |||||||||||||||||    
T  675982 ctggggtttgaaccccggaccttgcatatattatgcattgt 675942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 289 - 325
Target Start/End: Original strand, 6459936 - 6459972
Alignment:
Q  289 cggactttacatatattatgcattgttcatatcaact 325  Q
    ||||| |||||||||||||||||||| ||||||||||    
T  6459936 cggaccttacatatattatgcattgtccatatcaact 6459972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 8415495 - 8415543
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| |||  |||||||||||||||||||| |||| |||||    
T  8415495 gggtttgaaccttggatcttacatatattatgcattgtccataccaact 8415543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 22040711 - 22040663
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| || || || ||||||||||||||||| ||||||||||    
T  22040711 gggtttgaaccccgaaccttgcatatattatgcattgtccatatcaact 22040663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Original strand, 25198260 - 25198300
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttc 316  Q
    |||||||||||||| ||| |||||||||||||| |||||||    
T  25198260 ggggtttgaacctccgaccttacatatattatgtattgttc 25198300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 36479053 - 36479005
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaac 324  Q
    |||||| |||||||| || |||||||||||||||||||| |||| ||||    
T  36479053 ggggttcgaacctcgaaccttacatatattatgcattgtccataccaac 36479005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 37735849 - 37735813
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||| ||| ||||||||||||||||||||    
T  37735849 ggtttgaacctcagaccttacatatattatgcattgt 37735813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 315
Target Start/End: Complemental strand, 49281215 - 49281176
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgtt 315  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  49281215 tggggtttgaac-tcggactttacatatattatgtattgtt 49281176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 270 - 314
Target Start/End: Complemental strand, 49473713 - 49473669
Alignment:
Q  270 gtgactggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||| ||||| ||||| || |||||||||||||||||    
T  49473713 gtgactggggttcgaaccccggaccttgcatatattatgcattgt 49473669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 323
Target Start/End: Original strand, 49952571 - 49952615
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    ||||||||| ||||| |||||||||||||||||||| || |||||    
T  49952571 gtttgaaccccggaccttacatatattatgcattgtccaaatcaa 49952615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 279 - 323
Target Start/End: Complemental strand, 54677284 - 54677240
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    ||||||| |||| || |||||||||||||||||||| ||||||||    
T  54677284 gtttgaatctcgaaccttacatatattatgcattgtccatatcaa 54677240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 36; Significance: 0.00000000003; HSPs: 13)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 25186239 - 25186290
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| ||||| || ||||||||||||||||| ||||||||||    
T  25186239 ctggggtttgaaccccggaccttgcatatattatgcattgtccatatcaact 25186290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 270 - 325
Target Start/End: Complemental strand, 28202365 - 28202310
Alignment:
Q  270 gtgactggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||| |||||||||||| |||||| |||||||||||||||||||| | ||||||||    
T  28202365 gtgattggggtttgaacttcggaccttacatatattatgcattgtccctatcaact 28202310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 280 - 325
Target Start/End: Complemental strand, 3196618 - 3196573
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| |||| || |||||||||||||||||||||||||||||||    
T  3196618 tttgaatctcgaaccttacatatattatgcattgttcatatcaact 3196573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 29734753 - 29734704
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||| ||||||||||    
T  29734753 ggggtttgaaccacggaccttgcatatattatgcattgtccatatcaact 29734704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 270 - 314
Target Start/End: Original strand, 43117183 - 43117227
Alignment:
Q  270 gtgactggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||||||| ||| || |||||||||||||||||    
T  43117183 gtgactggggtttgaacctcagaccttgcatatattatgcattgt 43117227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 280 - 322
Target Start/End: Complemental strand, 35728957 - 35728915
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatca 322  Q
    ||||||||  ||||||||||||||||||||||||| |||||||    
T  35728957 tttgaaccctggactttacatatattatgcattgtacatatca 35728915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 314
Target Start/End: Original strand, 4557771 - 4557808
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||||| ||||| ||||||||||||||||||||    
T  4557771 gggtttgaaccacggaccttacatatattatgcattgt 4557808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 3904263 - 3904215
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| | ||| |||||||||||||||||||| | ||||||||    
T  3904263 gggtttgaaccccagaccttacatatattatgcattgtccctatcaact 3904215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 280 - 324
Target Start/End: Complemental strand, 4509595 - 4509551
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaac 324  Q
    ||||||||| |||| || ||||||||||||||||| |||||||||    
T  4509595 tttgaaccttggaccttgcatatattatgcattgtccatatcaac 4509551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 12413555 - 12413507
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaac 324  Q
    |||||||||||||| ||| || ||||||||||||||||| | |||||||    
T  12413555 ggggtttgaacctcagaccttgcatatattatgcattgtccttatcaac 12413507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 324
Target Start/End: Complemental strand, 12425615 - 12425567
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaac 324  Q
    |||||||||||||| ||| || ||||||||||||||||| | |||||||    
T  12425615 ggggtttgaacctcagaccttgcatatattatgcattgtccttatcaac 12425567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 318
Target Start/End: Complemental strand, 27889353 - 27889309
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgttcat 318  Q
    ||||||||||||||||  || |||||||| |||||||||||||||    
T  27889353 ctggggtttgaacctcaaaccttacatattttatgcattgttcat 27889309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 43356542 - 43356590
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||| ||||||||||| || ||||||||||||||||||| | ||||||    
T  43356542 gggttcgaacctcggaccttgcatatattatgcattgttcttgtcaact 43356590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 35; Significance: 0.0000000001; HSPs: 17)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 279 - 325
Target Start/End: Complemental strand, 22394094 - 22394048
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||||  |||||||||||||||||||| ||||||||||    
T  22394094 gtttgaacctcggatcttacatatattatgcattgtccatatcaact 22394048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 29695077 - 29695028
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| || || |||||||||||||||||||| ||||||||||    
T  29695077 ggggtttgaaccacgaaccttacatatattatgcattgtccatatcaact 29695028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 16579374 - 16579422
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| ||||| || |||||||||||||||||||||| |||||    
T  16579374 gggtttgaaccacggaccttgcatatattatgcattgttcataccaact 16579422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 271 - 314
Target Start/End: Original strand, 4763180 - 4763223
Alignment:
Q  271 tgactggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||| |||||||||| ||||| ||||||||||||||||||||    
T  4763180 tgactgaggtttgaaccccggaccttacatatattatgcattgt 4763223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 276 - 323
Target Start/End: Original strand, 40715948 - 40715995
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    |||||||||||| ||||| || ||||||||||||||||| ||||||||    
T  40715948 ggggtttgaaccccggaccttgcatatattatgcattgtccatatcaa 40715995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Complemental strand, 5614828 - 5614778
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||||| | ||| |||||||||||||||||| | ||||||||||    
T  5614828 tggggtttgaacccccgaccttacatatattatgcattatccatatcaact 5614778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 5107244 - 5107293
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||||||||| || ||||||||||||||| |||||| |||||    
T  5107244 ggggttcgaacctcggaccttgcatatattatgcattattcataccaact 5107293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 13864406 - 13864357
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||| |||||||||| |||||    
T  13864406 ggggtttgaaccccggaccttgcatatattatgtattgttcataccaact 13864357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 26409315 - 26409266
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||| ||||| |||||||||||||||||||| |||| |||||    
T  26409315 ggggttcgaaccccggaccttacatatattatgcattgtccataccaact 26409266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 26655526 - 26655477
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||| ||||| |||||||||||||||||||| |||| |||||    
T  26655526 ggggttcgaaccccggaccttacatatattatgcattgtccataccaact 26655477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 26927111 - 26927062
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||| ||||| |||||||||||||||||||| |||| |||||    
T  26927111 ggggttcgaaccccggaccttacatatattatgcattgtccataccaact 26927062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 31602824 - 31602873
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||| |||| || || |||||||||||||||||||||| |||||    
T  31602824 ggggtttgaatctcgaaccttgcatatattatgcattgttcataccaact 31602873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 34767187 - 34767236
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| |||||| |||||||| ||||| |||||||||| |||||    
T  34767187 ggggtttgaacttcggaccttacatattttatgtattgttcataacaact 34767236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 292 - 325
Target Start/End: Original strand, 40730210 - 40730243
Alignment:
Q  292 actttacatatattatgcattgttcatatcaact 325  Q
    |||||| |||||||||||||||||||||||||||    
T  40730210 actttatatatattatgcattgttcatatcaact 40730243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 274 - 323
Target Start/End: Complemental strand, 43406744 - 43406695
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    |||||||| | |||||||||||| |||||||||||| |||||| ||||||    
T  43406744 ctggggttcgtacctcggactttgcatatattatgcgttgttcctatcaa 43406695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Original strand, 18589867 - 18589915
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| |||| ||||| || |||||||||||||||||||||| |||||    
T  18589867 gggtttaaaccccggaccttgcatatattatgcattgttcataccaact 18589915  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 324
Target Start/End: Original strand, 22522800 - 22522848
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaac 324  Q
    |||||||||||| ||||| || ||||||||||||||||| |||| ||||    
T  22522800 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaac 22522848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 35; Significance: 0.0000000001; HSPs: 23)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 33153879 - 33153917
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||||| ||||||||||||||||||||    
T  33153879 ggggtttgaacctcggaccttacatatattatgcattgt 33153917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 26803450 - 26803499
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| |||||||| ||||||||||||||||| |||| |||||    
T  26803450 ggggtttgaaccccggactttgcatatattatgcattgtccataccaact 26803499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 34; E-Value: 0.0000000005
Query Start/End: Original strand, 270 - 323
Target Start/End: Original strand, 28798742 - 28798795
Alignment:
Q  270 gtgactggggtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    ||||| |||||||||||||||||  ||||||||||||| |||||||| ||||||    
T  28798742 gtgaccggggtttgaacctcggatcttacatatattatacattgttcctatcaa 28798795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Original strand, 6000142 - 6000180
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||||| || |||||||||||||||||    
T  6000142 ggggtttgaacctcggaccttgcatatattatgcattgt 6000180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 283 - 325
Target Start/End: Original strand, 15382825 - 15382867
Alignment:
Q  283 gaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    ||||||||||| || |||||||||| |||||||||||||||||    
T  15382825 gaacctcggaccttgcatatattatacattgttcatatcaact 15382867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 275 - 325
Target Start/End: Original strand, 16475911 - 16475961
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| |||| |||||||||||||| ||||||| || |||||    
T  16475911 tggggtttgaaccttggaccttacatatattatgtattgttcctaccaact 16475961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 16967196 - 16967242
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| || || ||||||||||||||||| ||||||||||    
T  16967196 gtttgaacctcgaaccttgcatatattatgcattgtccatatcaact 16967242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 276 - 314
Target Start/End: Complemental strand, 18166664 - 18166626
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||| |||||||| |||||||||||||||||    
T  18166664 ggggtttgaaccccggactttgcatatattatgcattgt 18166626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 279 - 325
Target Start/End: Original strand, 52262168 - 52262214
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| ||||| |||||||||||||||| |||||    
T  52262168 gtttgaacctcgaactttgcatattttatgcattgttcataccaact 52262214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 3693795 - 3693844
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| ||| ||||||||||||||| ||||  |||||||||    
T  3693795 ggggtttgaacctcagaccttacatatattatgctttgtctatatcaact 3693844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 278 - 315
Target Start/End: Original strand, 7996690 - 7996727
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgtt 315  Q
    ||||||||||||  ||||||||||||||||||||||||    
T  7996690 ggtttgaacctcaaactttacatatattatgcattgtt 7996727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 12268983 - 12269032
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||||| || |||||    
T  12268983 ggggtttgaaccccggaccttgcatatattatgcattgttcctaccaact 12269032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 267 - 316
Target Start/End: Complemental strand, 15668569 - 15668520
Alignment:
Q  267 gtagtgactggggtttgaacctcggactttacatatattatgcattgttc 316  Q
    |||||| |||||||||||||| ||||| || ||||| |||||||||||||    
T  15668569 gtagtggctggggtttgaaccccggaccttgcatattttatgcattgttc 15668520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 15892859 - 15892810
Alignment:
Q  277 gggtttgaacctcggactttacata-tattatgcattgttcatatcaact 325  Q
    ||||||||||||||||| ||||||| | |||||||||||||||| |||||    
T  15892859 gggtttgaacctcggaccttacatatttttatgcattgttcataccaact 15892810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Original strand, 17221519 - 17221568
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||||||||| || ||||||||||||||||||| || |||||    
T  17221519 ggggttcgaacctcggaccttgcatatattatgcattgttcttaccaact 17221568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 279 - 320
Target Start/End: Complemental strand, 23045250 - 23045209
Alignment:
Q  279 gtttgaacctcggactttacatatattatgcattgttcatat 320  Q
    ||||||||  ||||| ||||||||||||||||||||||||||    
T  23045250 gtttgaactccggaccttacatatattatgcattgttcatat 23045209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 276 - 325
Target Start/End: Complemental strand, 25533035 - 25532986
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||| ||||| || ||||||||||||||||| |||| |||||    
T  25533035 ggggtttgaaccccggaccttgcatatattatgcattgtccataccaact 25532986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 280 - 325
Target Start/End: Original strand, 28832174 - 28832219
Alignment:
Q  280 tttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||| ||| || |||||||||||||||||||||| |||||    
T  28832174 tttgaacctcagaccttgcatatattatgcattgttcataccaact 28832219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 277 - 325
Target Start/End: Complemental strand, 24695620 - 24695572
Alignment:
Q  277 gggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||||||||||| | ||| ||||||||||| |||||||||| |||||    
T  24695620 gggtttgaacctcgaattttgcatatattatgtattgttcataccaact 24695572  T

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Target: chr1; HSP #20
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 323
Target Start/End: Original strand, 30799262 - 30799310
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcatatcaa 323  Q
    ||||||||||| ||||||| || ||||||  ||||||||||||||||||    
T  30799262 tggggtttgaatctcggaccttgcatatacaatgcattgttcatatcaa 30799310  T

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Target: chr1; HSP #21
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 274 - 314
Target Start/End: Original strand, 33020040 - 33020080
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgt 314  Q
    |||||||||||||||| ||| || |||||||||||||||||    
T  33020040 ctggggtttgaacctcagaccttgcatatattatgcattgt 33020080  T

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Target: chr1; HSP #22
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 278 - 314
Target Start/End: Complemental strand, 39492381 - 39492345
Alignment:
Q  278 ggtttgaacctcggactttacatatattatgcattgt 314  Q
    ||||||||| |||||| ||||||||||||||||||||    
T  39492381 ggtttgaacttcggaccttacatatattatgcattgt 39492345  T

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Target: chr1; HSP #23
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 312
Target Start/End: Original strand, 49431992 - 49432028
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcatt 312  Q
    |||||||||||| ||||| ||||||||||||||||||    
T  49431992 ggggtttgaaccccggaccttacatatattatgcatt 49432028  T

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Target: scaffold0053 (Bit Score: 32; Significance: 0.000000007; HSPs: 1)
Name: scaffold0053
Description:

Target: scaffold0053; HSP #1
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 274 - 325
Target Start/End: Original strand, 11858 - 11909
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgttcatatcaact 325  Q
    |||||| ||||||||||||| |||||||| ||||||| |||||| |||||||    
T  11858 ctggggattgaacctcggaccttacatattttatgcaatgttcaaatcaact 11909  T

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Target: scaffold1127 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold1127
Description:

Target: scaffold1127; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 274 - 316
Target Start/End: Original strand, 1162 - 1204
Alignment:
Q  274 ctggggtttgaacctcggactttacatatattatgcattgttc 316  Q
    |||||||||||||| ||||| || |||||||||||||||||||    
T  1162 ctggggtttgaaccccggaccttgcatatattatgcattgttc 1204  T

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Target: scaffold0181 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0181
Description:

Target: scaffold0181; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 284 - 322
Target Start/End: Complemental strand, 12306 - 12268
Alignment:
Q  284 aacctcggactttacatatattatgcattgttcatatca 322  Q
    |||||||||| |||||||||| |||||||||||||||||    
T  12306 aacctcggaccttacatatataatgcattgttcatatca 12268  T

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Target: scaffold0334 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0334
Description:

Target: scaffold0334; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 275 - 319
Target Start/End: Complemental strand, 5245 - 5201
Alignment:
Q  275 tggggtttgaacctcggactttacatatattatgcattgttcata 319  Q
    ||||||||||||||| ||| || ||||||||||||||||| ||||    
T  5245 tggggtttgaacctcagaccttgcatatattatgcattgtccata 5201  T

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Target: scaffold0019 (Bit Score: 29; Significance: 0.0000004; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 276 - 316
Target Start/End: Complemental strand, 48709 - 48669
Alignment:
Q  276 ggggtttgaacctcggactttacatatattatgcattgttc 316  Q
    |||||||||| | |||||||| |||||||||||||||||||    
T  48709 ggggtttgaatcccggactttgcatatattatgcattgttc 48669  T

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