View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20868_high_1 (Length: 654)

Name: NF20868_high_1
Description: NF20868
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20868_high_1
NF20868_high_1
[»] chr7 (59 HSPs)
chr7 (401-637)||(243108-243342)
chr7 (1-169)||(17904163-17904331)
chr7 (1-170)||(26770178-26770347)
chr7 (1-169)||(29427273-29427441)
chr7 (1-176)||(46467444-46467619)
chr7 (168-326)||(243339-243497)
chr7 (1-170)||(37179441-37179609)
chr7 (1-169)||(6387801-6387969)
chr7 (1-161)||(9876271-9876431)
chr7 (1-169)||(29890935-29891103)
chr7 (17-170)||(6389731-6389884)
chr7 (1-169)||(41921963-41922131)
chr7 (1-169)||(4405109-4405277)
chr7 (46-165)||(31503091-31503210)
chr7 (70-166)||(9332364-9332460)
chr7 (60-169)||(19523863-19523974)
chr7 (3-149)||(9215573-9215722)
chr7 (3-169)||(12252069-12252238)
chr7 (27-154)||(33974506-33974636)
chr7 (3-154)||(46689878-46690033)
chr7 (3-169)||(31858203-31858371)
chr7 (318-376)||(17904354-17904412)
chr7 (101-169)||(29722955-29723023)
chr7 (3-149)||(5514797-5514945)
chr7 (54-169)||(43701551-43701666)
chr7 (322-376)||(6387720-6387774)
chr7 (318-376)||(29427192-29427250)
chr7 (3-169)||(33915717-33915884)
chr7 (54-170)||(33379130-33379245)
chr7 (318-369)||(26770370-26770421)
chr7 (322-380)||(9332516-9332574)
chr7 (318-376)||(29890854-29890912)
chr7 (318-376)||(31502680-31502738)
chr7 (318-376)||(37179359-37179417)
chr7 (318-376)||(46467363-46467421)
chr7 (92-154)||(49011058-49011120)
chr7 (3-111)||(48049057-48049168)
chr7 (1-79)||(22753177-22753257)
chr7 (322-367)||(41921892-41921937)
chr7 (321-376)||(4405303-4405358)
chr7 (318-376)||(6389915-6389973)
chr7 (334-376)||(19523821-19523863)
chr7 (136-172)||(29723381-29723417)
chr7 (136-172)||(37179328-37179364)
chr7 (321-376)||(9876457-9876512)
chr7 (318-380)||(7839247-7839309)
chr7 (318-376)||(31858120-31858178)
chr7 (318-376)||(46690054-46690112)
chr7 (136-169)||(4405353-4405386)
chr7 (136-169)||(17904407-17904440)
chr7 (136-169)||(29890826-29890859)
chr7 (137-169)||(46467335-46467367)
chr7 (136-171)||(6387690-6387725)
chr7 (168-230)||(1910969-1911031)
chr7 (1-47)||(31502763-31502809)
chr7 (318-376)||(48049193-48049251)
chr7 (335-376)||(33974702-33974743)
chr7 (318-374)||(5514970-5515026)
chr7 (137-169)||(26770424-26770456)
[»] chr5 (34 HSPs)
chr5 (1-169)||(34208538-34208706)
chr5 (1-169)||(12399055-12399223)
chr5 (1-169)||(23090298-23090466)
chr5 (1-169)||(29874954-29875122)
chr5 (1-169)||(4145694-4145862)
chr5 (3-171)||(4695273-4695441)
chr5 (1-169)||(3077597-3077765)
chr5 (35-154)||(42757953-42758072)
chr5 (1-104)||(22646018-22646121)
chr5 (3-154)||(12096313-12096466)
chr5 (100-171)||(42793038-42793109)
chr5 (318-376)||(29875145-29875203)
chr5 (100-169)||(41610625-41610694)
chr5 (322-376)||(12398974-12399028)
chr5 (322-373)||(4695193-4695244)
chr5 (322-376)||(3077792-3077846)
chr5 (318-376)||(22645937-22645995)
chr5 (322-376)||(34208733-34208787)
chr5 (322-376)||(4145889-4145943)
chr5 (322-376)||(23090493-23090547)
chr5 (330-376)||(42757833-42757879)
chr5 (3-169)||(19574686-19574852)
chr5 (3-148)||(22528023-22528171)
chr5 (102-166)||(4434783-4434847)
chr5 (136-171)||(12398944-12398979)
chr5 (136-170)||(42757804-42757838)
chr5 (136-169)||(29875198-29875231)
chr5 (136-169)||(42793562-42793595)
chr5 (137-169)||(23090543-23090575)
chr5 (137-169)||(41610373-41610405)
chr5 (332-375)||(12096231-12096274)
chr5 (120-154)||(594328-594362)
chr5 (100-166)||(8718028-8718094)
chr5 (136-169)||(34208782-34208815)
[»] chr8 (34 HSPs)
chr8 (1-169)||(33837838-33838006)
chr8 (1-169)||(2508905-2509073)
chr8 (4-169)||(28378947-28379112)
chr8 (1-169)||(45334385-45334553)
chr8 (1-169)||(25106211-25106379)
chr8 (1-171)||(38495581-38495751)
chr8 (1-169)||(9739985-9740153)
chr8 (39-164)||(13469652-13469777)
chr8 (46-169)||(27793345-27793468)
chr8 (1-125)||(2626346-2626472)
chr8 (3-169)||(32183592-32183759)
chr8 (100-169)||(27024433-27024502)
chr8 (318-376)||(2626266-2626324)
chr8 (322-376)||(2508824-2508878)
chr8 (322-376)||(33837757-33837811)
chr8 (318-376)||(38495500-38495558)
chr8 (322-376)||(45334304-45334358)
chr8 (102-169)||(25978969-25979036)
chr8 (318-376)||(13469536-13469594)
chr8 (318-376)||(25106402-25106460)
chr8 (318-376)||(28379138-28379196)
chr8 (322-376)||(9740181-9740235)
chr8 (101-169)||(8235162-8235230)
chr8 (136-172)||(33837726-33837762)
chr8 (107-154)||(2626667-2626714)
chr8 (137-170)||(9740231-9740264)
chr8 (136-169)||(25106455-25106488)
chr8 (136-169)||(27027655-27027688)
chr8 (136-169)||(28379191-28379224)
chr8 (136-169)||(45334276-45334309)
chr8 (54-134)||(3203413-3203492)
chr8 (136-171)||(38495470-38495505)
chr8 (318-376)||(32183509-32183567)
chr8 (137-169)||(13469508-13469540)
[»] chr6 (24 HSPs)
chr6 (1-169)||(27312225-27312393)
chr6 (1-169)||(32274434-32274602)
chr6 (1-167)||(8504811-8504977)
chr6 (2-162)||(5003889-5004049)
chr6 (1-169)||(29452651-29452820)
chr6 (1-170)||(31171099-31171268)
chr6 (67-169)||(12174700-12174802)
chr6 (1-108)||(2543142-2543249)
chr6 (1-169)||(7156346-7156502)
chr6 (54-172)||(18741944-18742062)
chr6 (322-376)||(32274629-32274683)
chr6 (121-169)||(29302500-29302548)
chr6 (318-376)||(2543272-2543330)
chr6 (318-376)||(5008322-5008380)
chr6 (318-376)||(27312142-27312201)
chr6 (318-376)||(29452570-29452628)
chr6 (320-376)||(7156265-7156321)
chr6 (340-376)||(8504761-8504797)
chr6 (322-380)||(31171014-31171072)
chr6 (136-169)||(8504733-8504766)
chr6 (136-169)||(27312114-27312147)
chr6 (136-169)||(2543325-2543358)
chr6 (136-169)||(32274678-32274711)
chr6 (137-169)||(18742191-18742223)
[»] chr3 (52 HSPs)
chr3 (1-169)||(18996967-18997135)
chr3 (1-169)||(18999506-18999674)
chr3 (1-169)||(29371647-29371815)
chr3 (1-169)||(32677586-32677754)
chr3 (1-169)||(39528749-39528917)
chr3 (1-169)||(41349480-41349648)
chr3 (1-169)||(1352105-1352273)
chr3 (1-179)||(28228426-28228604)
chr3 (1-169)||(39807088-39807256)
chr3 (1-169)||(36737943-36738111)
chr3 (6-169)||(55365908-55366071)
chr3 (3-166)||(21974152-21974315)
chr3 (3-166)||(21996583-21996746)
chr3 (1-163)||(38855323-38855485)
chr3 (3-166)||(22157261-22157424)
chr3 (1-162)||(29014799-29014960)
chr3 (1-154)||(39518422-39518575)
chr3 (1-171)||(32839947-32840116)
chr3 (3-154)||(49040955-49041107)
chr3 (318-380)||(32840140-32840202)
chr3 (318-376)||(32677505-32677563)
chr3 (322-408)||(41349367-41349453)
chr3 (318-376)||(18997158-18997216)
chr3 (318-376)||(18999697-18999755)
chr3 (318-376)||(29014718-29014776)
chr3 (318-376)||(29371566-29371624)
chr3 (318-376)||(36737862-36737920)
chr3 (318-376)||(39518598-39518656)
chr3 (100-172)||(49319344-49319416)
chr3 (322-376)||(1352024-1352078)
chr3 (322-376)||(39528944-39528998)
chr3 (322-376)||(39807007-39807061)
chr3 (324-376)||(22157455-22157507)
chr3 (322-376)||(55367747-55367801)
chr3 (324-376)||(21974346-21974398)
chr3 (324-376)||(21996777-21996829)
chr3 (321-376)||(38855511-38855566)
chr3 (136-171)||(1351994-1352029)
chr3 (318-376)||(28228626-28228687)
chr3 (136-170)||(39528993-39529027)
chr3 (136-169)||(18997211-18997244)
chr3 (136-169)||(18999750-18999783)
chr3 (136-169)||(29014690-29014723)
chr3 (136-169)||(36737834-36737867)
chr3 (136-169)||(38855561-38855594)
chr3 (136-169)||(39518651-39518684)
chr3 (136-169)||(41349371-41349404)
chr3 (137-169)||(46878980-46879012)
chr3 (70-144)||(837370-837442)
chr3 (136-169)||(29371538-29371571)
chr3 (136-169)||(32677477-32677510)
chr3 (136-169)||(39806979-39807012)
[»] chr1 (42 HSPs)
chr1 (1-169)||(47669119-47669287)
chr1 (1-171)||(46220257-46220427)
chr1 (1-170)||(9831502-9831671)
chr1 (1-169)||(10737810-10737978)
chr1 (1-176)||(18126844-18127018)
chr1 (1-169)||(4817269-4817437)
chr1 (1-170)||(3384704-3384871)
chr1 (1-169)||(48564818-48564985)
chr1 (1-169)||(4055484-4055652)
chr1 (1-168)||(7414208-7414375)
chr1 (1-154)||(8889457-8889610)
chr1 (67-169)||(1236205-1236307)
chr1 (1-149)||(39241172-39241320)
chr1 (100-172)||(33020203-33020275)
chr1 (90-169)||(1749521-1749600)
chr1 (318-376)||(1236098-1236156)
chr1 (3-146)||(26842462-26842606)
chr1 (320-376)||(18127043-18127099)
chr1 (318-376)||(3384623-3384681)
chr1 (322-376)||(9831698-9831752)
chr1 (322-376)||(46220454-46220508)
chr1 (322-376)||(47669314-47669368)
chr1 (320-376)||(4817462-4817518)
chr1 (318-376)||(4055675-4055733)
chr1 (318-376)||(8889634-8889692)
chr1 (318-376)||(10737729-10737787)
chr1 (318-376)||(48565008-48565066)
chr1 (3-169)||(33846764-33846935)
chr1 (3-169)||(33947043-33947214)
chr1 (318-376)||(39241343-39241401)
chr1 (136-169)||(10737701-10737734)
chr1 (136-169)||(46220503-46220536)
chr1 (136-169)||(47669363-47669396)
chr1 (136-168)||(1236071-1236103)
chr1 (41-112)||(37875849-37875920)
chr1 (138-169)||(48565063-48565094)
chr1 (136-166)||(9831747-9831777)
chr1 (318-355)||(7414399-7414436)
chr1 (136-169)||(8889687-8889720)
chr1 (136-169)||(33023428-33023461)
chr1 (136-169)||(37875727-37875760)
chr1 (186-230)||(51776549-51776593)
[»] chr2 (21 HSPs)
chr2 (1-167)||(15233757-15233923)
chr2 (1-169)||(43040958-43041126)
chr2 (1-169)||(35793016-35793183)
chr2 (1-169)||(41252415-41252583)
chr2 (1-169)||(31296083-31296251)
chr2 (1-169)||(41642891-41643062)
chr2 (1-172)||(44104656-44104836)
chr2 (1-154)||(31903489-31903641)
chr2 (3-154)||(21727684-21727838)
chr2 (318-376)||(41252607-41252665)
chr2 (100-169)||(10118660-10118729)
chr2 (324-376)||(15233952-15234004)
chr2 (318-376)||(35792935-35792993)
chr2 (318-376)||(44104574-44104632)
chr2 (321-376)||(43040877-43040932)
chr2 (136-171)||(43040847-43040882)
chr2 (318-376)||(21727863-21727921)
chr2 (136-169)||(10112339-10112372)
chr2 (136-169)||(15233999-15234032)
chr2 (100-169)||(36963131-36963200)
chr2 (137-169)||(44104546-44104578)
[»] scaffold0103 (2 HSPs)
scaffold0103 (1-169)||(44619-44788)
scaffold0103 (322-376)||(44813-44867)
[»] chr4 (31 HSPs)
chr4 (1-169)||(8955885-8956053)
chr4 (1-169)||(45590742-45590910)
chr4 (1-159)||(34334342-34334500)
chr4 (1-169)||(33288514-33288682)
chr4 (1-171)||(18835703-18835875)
chr4 (25-163)||(49162108-49162245)
chr4 (1-154)||(50774167-50774325)
chr4 (77-169)||(30469353-30469445)
chr4 (70-166)||(39481906-39482002)
chr4 (1-103)||(36971115-36971216)
chr4 (3-154)||(26025639-26025784)
chr4 (100-169)||(19256186-19256255)
chr4 (322-376)||(8955804-8955858)
chr4 (119-169)||(36016279-36016329)
chr4 (100-154)||(36968353-36968407)
chr4 (318-376)||(50774086-50774144)
chr4 (3-154)||(33109009-33109163)
chr4 (322-376)||(33288432-33288486)
chr4 (318-376)||(36971239-36971297)
chr4 (322-376)||(39482057-39482111)
chr4 (318-376)||(45590933-45590991)
chr4 (322-376)||(30469241-30469295)
chr4 (321-376)||(49162282-49162337)
chr4 (135-169)||(19257103-19257137)
chr4 (318-363)||(18835898-18835943)
chr4 (136-166)||(8955779-8955809)
chr4 (318-376)||(26025556-26025614)
chr4 (326-376)||(33108926-33108976)
chr4 (136-169)||(45590986-45591019)
chr4 (136-169)||(49162332-49162365)
chr4 (136-168)||(39482106-39482138)


Alignment Details
Target: chr7 (Bit Score: 167; Significance: 4e-89; HSPs: 59)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 167; E-Value: 4e-89
Query Start/End: Original strand, 401 - 637
Target Start/End: Complemental strand, 243342 - 243108
Alignment:
Q  401 agtatatataaagaatgatgattaagaaaacaccgactcacttcacttttcatatgttccatttaataaatcgaaatgnnnnnnntaagatttgttgaaa 500  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||       |||||||||||||||    
T  243342 agtatatataaagaatgatgattaagaaaacaccgactcacttcacttttcatatgttccatttaataaatcgaaatgaaaaaaataagatttgttgaaa 243243  T
Q  501 tgtagcaatataaaattacctattttgannnnnnnnnnnngaggtgttaggttgaaataaattgatattttttaagtattatcataaaatgagcgatgtc 600  Q
    ||||||||||||||||||||||||||||            ||||||||||||||||||||||||||| ||||||||||||||||||||||||| ||||||    
T  243242 tgtagcaatataaaattacctattttga--ttttcttttcgaggtgttaggttgaaataaattgatactttttaagtattatcataaaatgagtgatgtc 243145  T
Q  601 gacttactatttatttattttttcggtagttcttatc 637  Q
    |||||||||||||||||||||||||||||||||||||    
T  243144 gacttactatttatttattttttcggtagttcttatc 243108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 17904331 - 17904163
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  17904331 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 17904232  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17904231 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 17904163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 150; E-Value: 6e-79
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 26770347 - 26770178
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  26770347 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 26770248  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  26770247 taaaacatcaaaagttttggaatttagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 26770178  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29427273 - 29427441
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  29427273 tcattaaattcacatgtgataaaccaaagatcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29427372  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29427373 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29427441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 148; E-Value: 9e-78
Query Start/End: Original strand, 1 - 176
Target Start/End: Original strand, 46467444 - 46467619
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||| ||    
T  46467444 tcattaaattcacatgtgataaaccaaaggtcgcaactactttaatagtttattgtgttttccaacaaaggtaaacttgagaaaacaataataaattcac 46467543  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacttcata 176  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  46467544 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactacata 46467619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 147; E-Value: 4e-77
Query Start/End: Original strand, 168 - 326
Target Start/End: Original strand, 243339 - 243497
Alignment:
Q  168 tacttcataattggatgtctatttagtgtagtgctagataggtgaaacacctaccattatggaaggtataaaaataaagaatatatagacacgagtggac 267  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  243339 tacttcataattggatgtctatttagtgtagtgttagataggtgaaacacctaccattatggatgatataaaaataaagaatatatagacacgagtggac 243438  T
Q  268 ggagtaaatgcatgaatttaggtgtctagttttcatttgtgaacaaagacaaacacaca 326  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  243439 ggagtaaatgcatgaatttaggtgtctagttttcatttgtgaacaaagacaaacacaca 243497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 146; E-Value: 1e-76
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 37179441 - 37179609
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||| ||    
T  37179441 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaactt-agaaaacaataataaattcac 37179539  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37179540 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 37179609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 6387801 - 6387969
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||| ||    
T  6387801 tcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgataaaacaataacaaattcac 6387900  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  6387901 taaaacatcaaaagttttggaatatagttgcagttctaaaacatcaaaagaaaaggaatggagggagta 6387969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 161
Target Start/End: Complemental strand, 9876431 - 9876271
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||    
T  9876431 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataataaattcac 9876332  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgg 161  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||    
T  9876331 taaaacatcaaaagttttggaatatagttgaagttttaaaacatcaaaagaaaaggaatgg 9876271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29890935 - 29891103
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| ||    
T  29890935 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaaggataaacttgagaaaacaatcataaattcac 29891034  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  29891035 taaaacatcaaaaattttggaatatagttgaagttttaaaacatcaaaagaaaaggaatggagggagta 29891103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 17 - 170
Target Start/End: Complemental strand, 6389884 - 6389731
Alignment:
Q  17 tgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagtt 116  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||||||||||||||||||    
T  6389884 tgataaatcaaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacatcaaaagtt 6389785  T
Q  117 ttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||||||||||| |||| |||||||||||||||    
T  6389784 ttggaatatagttgaagttctaaaacatcaaaacaaaatgaatggagggagtac 6389731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 41921963 - 41922131
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||  |||||||||||||||||||||||||||| || ||||||||||||||| ||||||||| |||||| ||    
T  41921963 tcattaaattcacatgtgataaaccaaaggttgcaactactttaatagtttattgtgtttttcaacaagggtaaacttgataaaacaatattaaattcac 41922062  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||    
T  41922063 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaagaaatagagggagta 41922131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4405277 - 4405109
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||||| |||| ||||||||||||||||||||| ||    
T  4405277 tcattaaattcacatgtgataaaccaaaggtcacaactactttaataatttatggtgttttccaacaaggataaaattgagaaaacaataataaattcac 4405178  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| ||||| |||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  4405177 taaaacatcaaatgttttagaatatagttgaagttttaaaacatcaaaagaaaagaaatggagggagta 4405109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 100; E-Value: 4e-49
Query Start/End: Original strand, 46 - 165
Target Start/End: Original strand, 31503091 - 31503210
Alignment:
Q  46 tagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 145  Q
    |||||||| |||||||||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  31503091 tagtttatagtgttttccaacaagggtaaacttaagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 31503190  T
Q  146 aaaagaaaaggaatggaggg 165  Q
    ||||||||||||| ||||||    
T  31503191 aaaagaaaaggaacggaggg 31503210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 9332460 - 9332364
Alignment:
Q  70 ggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||| |||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||  ||||||||||    
T  9332460 ggtaaacctgagaaaacaataataaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaaaaaatggaggga 9332364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 60 - 169
Target Start/End: Original strand, 19523863 - 19523974
Alignment:
Q  60 ttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatca--aaagaaaagga 157  Q
    ||||| ||||||||||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||  ||| |||||||    
T  19523863 ttccaacaagggtaaacttgataaaacaataataaattcactaaaacatcaaaaattttggaatatagttgaagttctaaaacatcaacaaaaaaaagga 19523962  T
Q  158 atggagggagta 169  Q
    || |||||||||    
T  19523963 atagagggagta 19523974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 3 - 149
Target Start/End: Original strand, 9215573 - 9215722
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-attgtgt--tttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    ||||||||||||| |||||||||||||||||||||| |||||||| ||| || ||||  ||| || |||||||||| |||| |||| |||| || || ||    
T  9215573 attaaattcacatgtgataaatcaaaggtcacaactcctttaataattttatggtgtctttttcaacaagggtaaatttgaaaaaaaaatattacatata 9215672  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 149  Q
    ||||||||| |||  |||||||||||||||||||||||||||||||||||    
T  9215673 ctaaaacattaaatattttggaatatagttgaagttctaaaacatcaaaa 9215722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 12252238 - 12252069
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    ||||||||||||| ||||||  |||| |||| |||| |||||||||||| ||  |||||||| || | || ||||||||| |||||||| | ||||| ||    
T  12252238 attaaattcacatgtgataagccaaaagtcataactcctttaatagttttatggtgtgtttttcaactagagtaaacttgggaaaacaagattaaatata 12252139  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
     || |||||||||  ||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  12252138 ttagaacatcaaatattttggaatatagttgaagttctaaaacatcaaaagaaaaaaaatggagggagta 12252069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 68; E-Value: 5e-30
Query Start/End: Original strand, 27 - 154
Target Start/End: Complemental strand, 33974636 - 33974506
Alignment:
Q  27 aaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaat 123  Q
    |||||||||||| |||||||||||| ||  |||||||| || |||||||||||||| ||||| |||| ||||| ||||||||||| |||  |||||||||    
T  33974636 aaggtcacaactcctttaatagttttatggtgtgtttttcaacaagggtaaacttgggaaaaaaatattaaatatactaaaacataaaatattttggaat 33974537  T
Q  124 atagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||||||||||| |||||||||||||||||    
T  33974536 atagttgaagttcgaaaacatcaaaagaaaa 33974506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 46690033 - 46689878
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-attgtgt---tttccagcaagggtaaacttgagaaaacaataataaattt 98  Q
    ||||||||||||| ||||||  |||| ||||||||| |||||||||||| || ||||   ||| ||  ||||||||||||| ||||| |||| |||   |    
T  46690033 attaaattcacatgtgataagccaaatgtcacaacttctttaatagttttatcgtgtgttttttcaaaaagggtaaacttgggaaaaaaatattaaccat 46689934  T
Q  99 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||   ||||||||||||||||||||||||||||||||||||||||    
T  46689933 actaaaacatcaagtattttggaatatagttgaagttctaaaacatcaaaagaaaa 46689878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 31858203 - 31858371
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    |||||||| |||| |||||| |||||||||||||||  ||||||| ||| ||  |||||||| || | |||||||| ||| ||||| || | ||||| ||    
T  31858203 attaaatttacatgtgataagtcaaaggtcacaactcatttaatacttttatgatgtgtttttcaacgagggtaaatttgggaaaaaaa-attaaatata 31858301  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||  ||||  ||||||||||||||| ||||||||||||||||||  |||||||||||||    
T  31858302 ctaaaacatcaaatattttaaaatatagttgaagttgtaaaacatcaaaagaaaaaaaatggagggagta 31858371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 17904354 - 17904412
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  17904354 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 17904412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 29723023 - 29722955
Alignment:
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||| |||||    
T  29723023 taaaacatcaaaagttttggaataaagtttaagttctaaaatatcaaaagaaaaggaatggagagagta 29722955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 3 - 149
Target Start/End: Complemental strand, 5514945 - 5514797
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtt---tattgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    ||||||||||||| ||||||||||||||||||||||  ||||||||||   || ||||||||  | ||||||||||||||| |||  |||| ||||| ||    
T  5514945 attaaattcacatgtgataaatcaaaggtcacaactcttttaatagttttatagtgtgttttttaacaagggtaaacttga-aaataaatattaaatata 5514847  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 149  Q
    |||||  ||||||  |||| ||||||| || |||||||||||||| ||||    
T  5514846 ctaaataatcaaatattttagaatatatttaaagttctaaaacattaaaa 5514797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 54 - 169
Target Start/End: Complemental strand, 43701666 - 43701551
Alignment:
Q  54 tgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 153  Q
    |||||||| || |||||||||| |||   ||| |||| ||||  | |||||||||||||  |||||||||  |||| |||||||||||||||||||||||    
T  43701666 tgtgtttttcaacaagggtaaaattggataaaaaatattaaaaattctaaaacatcaaattttttggaatgaagtttaagttctaaaacatcaaaagaaa 43701567  T
Q  154 aggaatggagggagta 169  Q
    ||||||||||||||||    
T  43701566 aggaatggagggagta 43701551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 6387774 - 6387720
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  6387774 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 6387720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 29427250 - 29427192
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  29427250 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagaggtaaaa 29427192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 33915884 - 33915717
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    |||||||||| |||||||||  |||||||||||||   ||||||||||| ||  |||||||| || ||||| |||||||| ||||| || | ||||| ||    
T  33915884 attaaattcatatatgataaggcaaaggtcacaacctatttaatagttttatggtgtgtttttcaacaagg-taaacttgggaaaaaaaaattaaatata 33915786  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||  ||||| ||||||||| || ||| |||||| ||||||||||  |||||||||||||    
T  33915785 ctaaaacatcaaatattttgaaatatagttaaaattcaaaaacaacaaaagaaaa-aaatggagggagta 33915717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 54 - 170
Target Start/End: Original strand, 33379130 - 33379245
Alignment:
Q  54 tgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 153  Q
    |||||||| || |||||||||| ||| || || |||| ||||  | |||||||||||||  ||||| |||  ||||||||||||||||||||||||||||    
T  33379130 tgtgtttttcaacaagggtaaaattg-gataaaaatattaaaaatcctaaaacatcaaatattttgaaatcaagttgaagttctaaaacatcaaaagaaa 33379228  T
Q  154 aggaatggagggagtac 170  Q
    || ||||||||||||||    
T  33379229 agaaatggagggagtac 33379245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 318 - 369
Target Start/End: Original strand, 26770370 - 26770421
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaaga 369  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||    
T  26770370 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaaga 26770421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 380
Target Start/End: Original strand, 9332516 - 9332574
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaatatc 380  Q
    |||||||| |||||||| ||||||||||||||||||||||||| |||||||||||||||    
T  9332516 acacaaatatttatatactttaattactccttaaaacttgtgttaagagctaaaatatc 9332574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 29890912 - 29890854
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  29890912 aaacacacaagtgtttatatactttaattactccttaaaacttgtgtcaaaagctaaaa 29890854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 31502738 - 31502680
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||||||||||||||||||  |||||||||||||    
T  31502738 aaacacacaaatgtttatatactttaattactccttaaaacttgcatcaagagctaaaa 31502680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 37179417 - 37179359
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||||| |||||| ||| |||||||||||||||||||||||||||||||||    
T  37179417 aaacacacaaatgtctatatactttcattactccttaaaacttgtgtcaagagctaaaa 37179359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 46467421 - 46467363
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||| |||||||||||| |||||    
T  46467421 aaacacacaaatgtttatatactttaattactccttaaaatttgtgtcaagagttaaaa 46467363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 92 - 154
Target Start/End: Original strand, 49011058 - 49011120
Alignment:
Q  92 taaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||| ||||||||||||||| |||||| |||||||||||||| |||||||||||||||||||    
T  49011058 taaatatactaaaacatcaaatgttttgaaatatagttgaagtcctaaaacatcaaaagaaaa 49011120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 3 - 111
Target Start/End: Complemental strand, 48049168 - 48049057
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt---attgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    |||||||| |||| ||||||  |||||||||||||| ||||||||||||   | |||||||| || || ||||||||||| ||||| |||| ||||| ||    
T  48049168 attaaatttacatgtgataagccaaaggtcacaactcctttaatagttttctagtgtgtttttcaacaggggtaaacttgggaaaaaaatattaaatata 48049069  T
Q  100 ctaaaacatcaa 111  Q
    ||||||||||||    
T  48049068 ctaaaacatcaa 48049057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 22753177 - 22753257
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttat--tgtgttttccagcaagggtaaacttg 79  Q
    ||||||||||||||| |||||| |||||||||||||||  |||||||||||||  | ||||||||| |||| |||||||||    
T  22753177 tcattaaattcacatgtgataagtcaaaggtcacaacttttttaatagtttatagtttgttttccaacaagcgtaaacttg 22753257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 322 - 367
Target Start/End: Complemental strand, 41921937 - 41921892
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaa 367  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||    
T  41921937 acacaaatgtttatatactttaattactccttaaaacttgtgtcaa 41921892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 4405303 - 4405358
Alignment:
Q  321 cacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||    
T  4405303 cacacaaatatttatatattttaattactccttaaaacttgtgccaatagctaaaa 4405358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 6389915 - 6389973
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| ||||| |||| |||||||||||||||||||| |||||    
T  6389915 aaacacacaaatatttatatactttaactacttcttaaaacttgtgtcaagagttaaaa 6389973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 334 - 376
Target Start/End: Complemental strand, 19523863 - 19523821
Alignment:
Q  334 atataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||| |||||||||||||||||||||||||||||||||||||    
T  19523863 atatactttaattactccttaaaacttgtgtcaagagctaaaa 19523821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Original strand, 29723381 - 29723417
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtactt 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  29723381 ctaaaacatcaaaagaaaaggaatggagggagtactt 29723417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 37179364 - 37179328
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtactt 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  37179364 ctaaaacatcaaaagaaaaggaatggagggagtactt 37179328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 9876457 - 9876512
Alignment:
Q  321 cacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||| |||||||| ||||||||||||||||||||| || ||| ||||||||    
T  9876457 cacacaaatatttatatattttaattactccttaaaacttatgccaatagctaaaa 9876512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 7839247 - 7839309
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaatatc 380  Q
    ||||| |||||| |||||||| |||||||||||||||| |||||||  || ||||||||||||    
T  7839247 aaacatacaaatatttatatactttaattactccttaatacttgtgataacagctaaaatatc 7839309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 31858178 - 31858120
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||| ||||||||||||||  |||||||||||||||| | |||||||||||| |||||    
T  31858178 aaacatacaaatgtttatattctttaattactccttaagatttgtgtcaagagttaaaa 31858120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 46690054 - 46690112
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||| |||||| |||||||| |||||||||||||||| | ||||| ||||||||||||    
T  46690054 aaacatacaaatatttatatactttaattactccttaagatttgtgccaagagctaaaa 46690112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 4405353 - 4405386
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  4405353 ctaaaacatcaaaagaaaaggaatggagggagta 4405386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 17904407 - 17904440
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  17904407 ctaaaacatcaaaagaaaaggaatggagggagta 17904440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 29890859 - 29890826
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  29890859 ctaaaacatcaaaagaaaaggaatggagggagta 29890826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 46467367 - 46467335
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  46467367 taaaacatcaaaagaaaaggaatggagggagta 46467335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 171
Target Start/End: Complemental strand, 6387725 - 6387690
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||||||||||||||| ||||||    
T  6387725 ctaaaacatcaaaagaaaaggaatggaggaagtact 6387690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 168 - 230
Target Start/End: Complemental strand, 1911031 - 1910969
Alignment:
Q  168 tacttcataattggatgtctatttagtgtagtgctagataggtgaaacacctaccattatgga 230  Q
    ||||||| ||| || |||||||||| | |||||||| ||||||||| |||| |||||||||||    
T  1911031 tacttcacaatagggtgtctatttaatatagtgctaaataggtgaagcacccaccattatgga 1910969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 31502763 - 31502809
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaata 47  Q
    ||||||||||||||| ||||||  |||| ||||||||||||||||||    
T  31502763 tcattaaattcacatgtgataagccaaaagtcacaactactttaata 31502809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 48049193 - 48049251
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||| |||||| ||| |||| |||||||||| ||||| ||||||| ||||||||||||    
T  48049193 aaacatacaaatatttctatactttaattactacttaagacttgtgccaagagctaaaa 48049251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 335 - 376
Target Start/End: Original strand, 33974702 - 33974743
Alignment:
Q  335 tataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||| |||||||||||||||| ||||||| ||||||||||||    
T  33974702 tatactttaattactccttaagacttgtgccaagagctaaaa 33974743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 318 - 374
Target Start/End: Original strand, 5514970 - 5515026
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaa 374  Q
    ||||| |||||| ||| |||| |||||||| || |||| ||||||||||||||||||    
T  5514970 aaacatacaaatatttttatattttaattattcattaagacttgtgtcaagagctaa 5515026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 26770424 - 26770456
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||    
T  26770424 taaaacatcaaaagaaaatgaatggagggagta 26770456  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 153; Significance: 9e-81; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 153; E-Value: 9e-81
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 34208706 - 34208538
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  34208706 tcattaaattcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 34208607  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34208606 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 34208538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 12399055 - 12399223
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  12399055 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 12399154  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12399155 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 12399223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 23090466 - 23090298
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  23090466 tcattaaattcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 23090367  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  23090366 taaaacatcaaaaattttggaatacagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 23090298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 29875122 - 29874954
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  29875122 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29875023  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  29875022 taaaacatcaaatgttttggaatatagttgaagttctaaaacatcaaaagaaaaagaatggagggagta 29874954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4145862 - 4145694
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| ||||| ||    
T  4145862 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttaagaaaacaataacaaattcac 4145763  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||    
T  4145762 taaaacatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaaggaatggagcgagta 4145694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 3 - 171
Target Start/End: Original strand, 4695273 - 4695441
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttacta 102  Q
    ||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||||    
T  4695273 attaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcacta 4695372  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||| ||||||||||    
T  4695373 aaacatcaaaagttttgaaatatagttgaagttctaaaaaatcaaaagaaaaggaatgaagggagtact 4695441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 3077765 - 3077597
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||||||| || |||||||  ||| ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||| ||||| ||    
T  3077765 tcattaaattcatatgtgataaacaaaatgtcacaactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaataacaaattcac 3077666  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||  |||||||||||| ||||||||||||||||||||| ||||||||||||||    
T  3077665 taaaacatcaaaagttttaaaatatagttgaaattctaaaacatcaaaagaaaatgaatggagggagta 3077597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 88; E-Value: 6e-42
Query Start/End: Original strand, 35 - 154
Target Start/End: Original strand, 42757953 - 42758072
Alignment:
Q  35 aactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagt 134  Q
    ||||||||||||||||||| |||||||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||| || |||||||||||    
T  42757953 aactactttaatagtttatcgtgttttccaacaaggataaacttgagaaaacaataataaattcactaaaacatcaaaagttttgaaaaatagttgaagt 42758052  T
Q  135 tctaaaacatcaaaagaaaa 154  Q
    |||||||||| |||| ||||    
T  42758053 tctaaaacataaaaaaaaaa 42758072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 1 - 104
Target Start/End: Original strand, 22646018 - 22646121
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| || ||||| |||||||||||||||||||||||||| ||    
T  22646018 tcattaaattcacatgtgataaatcaaaagtcacaactactttaatagtttatggtgtttttcaacaaggttaaacttgagaaaacaataataaattcac 22646117  T
Q  101 taaa 104  Q
    ||||    
T  22646118 taaa 22646121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 12096313 - 12096466
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataataaatt-t 98  Q
    ||||||||| ||| |||||| |||| |||||| |||| ||||||||||| ||  |||||||| || |||| ||| ||||||||||| |||| |||| | |    
T  12096313 attaaattcgcatgtgataagtcaa-ggtcacgacta-tttaatagttttatggtgtgtttttcaacaagagtacacttgagaaaagaatattaaaatat 12096410  T
Q  99 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    | |||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  12096411 attaaaacatcaaatgttttggaatatagttgaagtcctaaaacatcaaaagaaaa 12096466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 100 - 171
Target Start/End: Complemental strand, 42793109 - 42793038
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||||||||||| |||| ||| ||||||||||||||||||||||||||||| |||||||    
T  42793109 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagtgagtact 42793038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 29875145 - 29875203
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  29875145 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 29875203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 41610625 - 41610694
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||||||||||||||||||||||||| ||||||| |||||    
T  41610625 ctaaaacatcaaaagttttggaataaagtttaagttctaaaacatcaaaagaaaagaaatggagagagta 41610694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 12399028 - 12398974
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  12399028 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 12398974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 322 - 373
Target Start/End: Complemental strand, 4695244 - 4695193
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagcta 373  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  4695244 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagcta 4695193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 3077792 - 3077846
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  3077792 acacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 3077846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 22645995 - 22645937
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| ||||||||||||    
T  22645995 aaacacacaaatatttatatactttaattactccttaaaacttgtgccaagagctaaaa 22645937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 34208733 - 34208787
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  34208733 acacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 34208787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 4145889 - 4145943
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  4145889 acacaaatatttatatactttaattactccttaaaacttgtgtcaagaactaaaa 4145943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 23090493 - 23090547
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||| ||||||||||||||||||||||||||||||| |||||    
T  23090493 acacaaatgtttgtatactttaattactccttaaaacttgtgtcaagaggtaaaa 23090547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 330 - 376
Target Start/End: Complemental strand, 42757879 - 42757833
Alignment:
Q  330 gtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||| |||||||||||||||||||||||||||||||||||||    
T  42757879 gtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 42757833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 19574852 - 19574686
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgt--tttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||||||||| ||||| ||||| |||| || |  ||||| ||||||| ||||  ||| || ||||||| | |||| ||||| |||| ||||| ||     
T  19574852 attaaattcacatacgataagtcaaatgtcataagtcatttaaaagtttatggtgtctttttcaacaagggtgaccttgggaaaa-aatattaaatatat 19574754  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||| |||  ||||| ||| || ||||||| |||||||||||||||| ||  |||||||||||||    
T  19574753 taaaacattaaatattttgaaatttaattgaagtcctaaaacatcaaaagacaa-aaatggagggagta 19574686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 3 - 148
Target Start/End: Complemental strand, 22528171 - 22528023
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    |||||||||| || ||||||  ||||||||||||||  ||||||||||| ||  |||||||| || ||| |||||| |||  | || | || ||||| ||    
T  22528171 attaaattcatatgtgataagccaaaggtcacaactcttttaatagttttatggtgtgtttttcaacaaaggtaaatttggaataaaattattaaatgta 22528072  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaa 148  Q
    |||||||||||||  ||||||| |||| ||||||| |||||| ||||||    
T  22528071 ctaaaacatcaaatattttggagtataattgaagtcctaaaatatcaaa 22528023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 102 - 166
Target Start/End: Complemental strand, 4434847 - 4434783
Alignment:
Q  102 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||  | ||| |||| ||||||||| |||||||||||||||||||| ||||||||||    
T  4434847 aaaacatcaaatatcttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggaggga 4434783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 171
Target Start/End: Complemental strand, 12398979 - 12398944
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  12398979 ctaaaacatcaaaagaaaaggaatggagggagtact 12398944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 170
Target Start/End: Complemental strand, 42757838 - 42757804
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  42757838 ctaaaacatcaaaagaaaaggaatggagggagtac 42757804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 29875198 - 29875231
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  29875198 ctaaaacatcaaaagaaaaggaatggagggagta 29875231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 42793562 - 42793595
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  42793562 ctaaaacatcaaaagaaaaggaatggagggagta 42793595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 23090543 - 23090575
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  23090543 taaaacatcaaaagaaaaggaatggagggagta 23090575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 41610405 - 41610373
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  41610405 taaaacatcaaaagaaaaggaatggagggagta 41610373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 332 - 375
Target Start/End: Complemental strand, 12096274 - 12096231
Alignment:
Q  332 ttatataatttaattactccttaaaacttgtgtcaagagctaaa 375  Q
    |||||| |||||||||||||||||  ||||||||||||||||||    
T  12096274 ttatatgatttaattactccttaagtcttgtgtcaagagctaaa 12096231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 120 - 154
Target Start/End: Original strand, 594328 - 594362
Alignment:
Q  120 gaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||||| ||||||||||||||||||    
T  594328 gaatatagttgaagttttaaaacatcaaaagaaaa 594362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 100 - 166
Target Start/End: Complemental strand, 8718094 - 8718028
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||  ||||| |||| ||||||| |  ||||| ||||||||||||| ||||||||||    
T  8718094 ctaaaacatcaaatattttgaaataaagttgaaatcttaaaatatcaaaagaaaagaaatggaggga 8718028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 34208782 - 34208815
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||| |||||||||||||||||||    
T  34208782 ctaaaacatcaaaaaaaaaggaatggagggagta 34208815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 149; Significance: 2e-78; HSPs: 34)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33837838 - 33838006
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  33837838 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 33837937  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33837938 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 33838006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 2508905 - 2509073
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  2508905 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttactgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 2509004  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2509005 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 2509073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 142; E-Value: 3e-74
Query Start/End: Original strand, 4 - 169
Target Start/End: Complemental strand, 28379112 - 28378947
Alignment:
Q  4 ttaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaa 103  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||    
T  28379112 ttaaattcacatgcgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcactaa 28379013  T
Q  104 aacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  28379012 aacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaataatggagggagta 28378947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 45334385 - 45334553
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| ||||| ||    
T  45334385 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgaaaaaacaataacaaattcac 45334484  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||    
T  45334485 taaaacatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaaggaatggagggagta 45334553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 25106379 - 25106211
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||| ||    
T  25106379 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgaaaaaacaatcataaattcac 25106280  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||    
T  25106279 taaaacatcaaaaattttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagagagta 25106211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 1 - 171
Target Start/End: Original strand, 38495581 - 38495751
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  38495581 tcattaaattcacatgtgataaaccaaatgtcataactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 38495680  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
     |||||||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||||||| ||||||    
T  38495681 caaaacatcaaaaattttagaatatagttgaagttctaaaacatcacaagaaaaagaatggaggaagtact 38495751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 9740153 - 9739985
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| || ||||| ||||||||||||| |||||||||||| |     
T  9740153 tcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaaggataaacttgagaaagcaataataaattcag 9740054  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||  |||||||||||||||||||||||||||||||||||||||||    
T  9740053 taaaacatcaaaagttttgaaatatacatgaagttctaaaacatcaaaagaaaaggaatggagggagta 9739985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 39 - 164
Target Start/End: Original strand, 13469652 - 13469777
Alignment:
Q  39 actttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttcta 138  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||    
T  13469652 actttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaattataaatttactaaaatatcaaaagttttggaatatagttgaagttcta 13469751  T
Q  139 aaacatcaaaagaaaaggaatggagg 164  Q
    ||||||||||||||||||||||||||    
T  13469752 aaacatcaaaagaaaaggaatggagg 13469777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 46 - 169
Target Start/End: Original strand, 27793345 - 27793468
Alignment:
Q  46 tagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatc 145  Q
    ||||||||||||||||||| |||| ||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||| |||||||||||    
T  27793345 tagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcactaaaacattaaaagttttggaatatagttgaagatctaaaacatc 27793444  T
Q  146 aaaagaaaaggaatggagggagta 169  Q
    ||||||||| ||||||| ||||||    
T  27793445 aaaagaaaatgaatggaaggagta 27793468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 2626346 - 2626472
Alignment:
Q  1 tcattaaatt-cacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaac-aataataaattt 98  Q
    |||||||||| ||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||     
T  2626346 tcattaaatttcacatgtgataaaccaaaggtcacaattactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaaataataaattc 2626445  T
Q  99 actaaaacatcaaaagttttggaatat 125  Q
    |||||||||||||||||||||||||||    
T  2626446 actaaaacatcaaaagttttggaatat 2626472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 90; E-Value: 4e-43
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 32183592 - 32183759
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttat--tgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||| ||||||  |||||||| ||||| ||| ||||||||||  ||||||||||| |||||||||||||| ||||| |||| ||||| |||    
T  32183592 attaaattcacatgtgataagccaaaggtcgcaactcctt-aatagtttatggtgtgttttccaacaagggtaaacttgggaaaaaaatattaaatatac 32183690  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||||||||  |||| ||||||||    
T  32183691 taaaacatcaaatattttggaatatagttgaagttctaaaacatcaaaagaaaaaaaatgaagggagta 32183759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 27024502 - 27024433
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  27024502 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagta 27024433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 2626324 - 2626266
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2626324 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 2626266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 2508878 - 2508824
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  2508878 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 2508824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 33837811 - 33837757
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  33837811 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 33837757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 38495558 - 38495500
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||    
T  38495558 aaacacacaaatgtttatatattttaattactccttaaaacttatgtcaagagctaaaa 38495500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 45334358 - 45334304
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  45334358 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 45334304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 102 - 169
Target Start/End: Original strand, 25978969 - 25979036
Alignment:
Q  102 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||| |||||| |||| ||||||||| |||||||||||||||||||| |||||||||||||    
T  25978969 aaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaaagaaatggagggagta 25979036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 13469594 - 13469536
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  13469594 aaacacacaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaa 13469536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 25106402 - 25106460
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| ||||||||    
T  25106402 aaacacacaagtgtttatatactttaattactccttaaaacttgtgtcaaaagctaaaa 25106460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 28379138 - 28379196
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||| |||||||||||||||| |||||| ||||||||||||||||||||||||||||||    
T  28379138 aaacgcacaaatgtttatatactttaatcactccttaaaacttgtgtcaagagctaaaa 28379196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 9740181 - 9740235
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||| |||||||||||||||||| |||||    
T  9740181 acacaaatgtttatatactttaattactccctaaaacttgtgtcaagagttaaaa 9740235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 101 - 169
Target Start/End: Complemental strand, 8235230 - 8235162
Alignment:
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| |||||| |||| | ||||||| |||||||||||||||||||  |||||||||||||    
T  8235230 taaaacatcaaatgttttgaaataaaattgaagtcctaaaacatcaaaagaaaataaatggagggagta 8235162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 136 - 172
Target Start/End: Complemental strand, 33837762 - 33837726
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtactt 172  Q
    |||||||||||||||||||||||||||||||||||||    
T  33837762 ctaaaacatcaaaagaaaaggaatggagggagtactt 33837726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 107 - 154
Target Start/End: Original strand, 2626667 - 2626714
Alignment:
Q  107 atcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||||||||||||||||||||||||||||||||| || |||| ||||    
T  2626667 atcaaaagttttggaatatagttgaagttctaaaatataaaaaaaaaa 2626714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 137 - 170
Target Start/End: Original strand, 9740231 - 9740264
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagtac 170  Q
    ||||||||||||||||||||||||||||||||||    
T  9740231 taaaacatcaaaagaaaaggaatggagggagtac 9740264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 25106455 - 25106488
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  25106455 ctaaaacatcaaaagaaaaggaatggagggagta 25106488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 27027655 - 27027688
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  27027655 ctaaaacatcaaaagaaaaggaatggagggagta 27027688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 28379191 - 28379224
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  28379191 ctaaaacatcaaaagaaaaggaatggagggagta 28379224  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 45334309 - 45334276
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  45334309 ctaaaacatcaaaagaaaaggaatggagggagta 45334276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 54 - 134
Target Start/End: Original strand, 3203413 - 3203492
Alignment:
Q  54 tgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagt 134  Q
    |||||||| || ||| | |||||||||||||| |||| ||||| |||||||||||||||  ||||  ||||||||||||||    
T  3203413 tgtgtttttcaacaaagataaacttgagaaaa-aatattaaatatactaaaacatcaaatattttaaaatatagttgaagt 3203492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 136 - 171
Target Start/End: Complemental strand, 38495505 - 38495470
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||||| ||||||||||||||||    
T  38495505 ctaaaacatcaaaagaaaatgaatggagggagtact 38495470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 32183567 - 32183509
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||| |||||| ||| |||  |||||||||||||||| ||||||| ||||||||||||    
T  32183567 aaacatacaaatatttctatgctttaattactccttaagacttgtgccaagagctaaaa 32183509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 13469540 - 13469508
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||| ||||||    
T  13469540 taaaacatcaaaagaaaaggaatggaaggagta 13469508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 149; Significance: 2e-78; HSPs: 24)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 27312225 - 27312393
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  27312225 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 27312324  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  27312325 taaaacatcaaatgttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 27312393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 32274602 - 32274434
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  32274602 tcattaaagtcacatatgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 32274503  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  32274502 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 32274434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 167
Target Start/End: Original strand, 8504811 - 8504977
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||| || ||||||||||| |||||||| ||||||||||| ||    
T  8504811 tcattaaattcacatataataaaccaaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacctgagaaaataataataaattcac 8504910  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggag 167  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||    
T  8504911 taaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaatgaatggagggag 8504977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 2 - 162
Target Start/End: Complemental strand, 5004049 - 5003889
Alignment:
Q  2 cattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttact 101  Q
    |||||||||||| | |||||||||||| |||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||    
T  5004049 cattaaattcacctgtgataaatcaaatgtcaaaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcact 5003950  T
Q  102 aaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgga 162  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||| |||| |||||||    
T  5003949 aaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaaaaaaatgaatgga 5003889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29452651 - 29452820
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaa-taataaattta 99  Q
    ||||||||||||||| ||||||||||||||||||||||| ||||||||||||| |||||||||| |||| |||||||||||||||||| ||||||||| |    
T  29452651 tcattaaattcacatgtgataaatcaaaggtcacaactattttaatagtttatggtgttttccaacaagtgtaaacttgagaaaacaagtaataaattca 29452750  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||| |  ||| ||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  29452751 ctaaaacatcaagaaatttagaatatagttgaagttctaaaacatcagaagaaaagaaatggagggagta 29452820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 31171099 - 31171268
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| ||||||||||||  ||||||||||  || | |||||||||||||||||||||||||| ||    
T  31171099 tcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttaaggtgttttccaataaagataaacttgagaaaacaataataaattcac 31171198  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    || |||||| || ||||||||||| | ||||| ||||||| |||||||||||||| ||||||||||||||    
T  31171199 tacaacatctaatgttttggaatacatttgaatttctaaatcatcaaaagaaaagaaatggagggagtac 31171268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 169
Target Start/End: Complemental strand, 12174802 - 12174700
Alignment:
Q  67 aagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||    
T  12174802 aagggtaaacttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatatttaaagttctaaaacattaaaagaaaaggaatggaggga 12174703  T
Q  167 gta 169  Q
    |||    
T  12174702 gta 12174700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 84; E-Value: 1e-39
Query Start/End: Original strand, 1 - 108
Target Start/End: Complemental strand, 2543249 - 2543142
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||    
T  2543249 tcattaaattcacatgtgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 2543150  T
Q  101 taaaacat 108  Q
    ||||||||    
T  2543149 taaaacat 2543142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 80; E-Value: 3e-37
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 7156346 - 7156502
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||| |||||||||||||||| |||||||||| ||||            |||||||||||||||| ||    
T  7156346 tcattaaattcacatgtgataaaccaaatgtcacaattactttaatagtttatggtgttttccaacaag------------aaaacaataataaattcac 7156433  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||| |||||||||||||||||||||   ||||||||||||||||||||| |||||||||||||    
T  7156434 taaaacatctaaagttttggaatatagttgattgtctaaaacatcaaaagaaaagaaatggagggagta 7156502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 54 - 172
Target Start/End: Complemental strand, 18742062 - 18741944
Alignment:
Q  54 tgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaa 153  Q
    |||||||| || |||||||||| ||||||| |||||| ||||| ||||||||||||||| |||||| |||| ||||||||| ||||||||||||||||||    
T  18742062 tgtgtttttcaacaagggtaaatttgagaatacaatattaaatatactaaaacatcaaatgttttgaaataaagttgaagtcctaaaacatcaaaagaaa 18741963  T
Q  154 aggaatggagggagtactt 172  Q
    || ||||||||||||||||    
T  18741962 agaaatggagggagtactt 18741944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 32274629 - 32274683
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32274629 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 32274683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 121 - 169
Target Start/End: Original strand, 29302500 - 29302548
Alignment:
Q  121 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||    
T  29302500 aatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29302548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 2543272 - 2543330
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||| ||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  2543272 aaacacacagatgtttatatactttaattacttcttaaaacttgtgtcaagagctaaaa 2543330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 5008322 - 5008380
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||| |||||||||||    
T  5008322 aaacacacaaatatttatatactttaattactccttaaaacttgtgttaagagctaaaa 5008380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 27312201 - 27312142
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtc-aagagctaaaa 376  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||| |||||||||||    
T  27312201 aaacacacaaatatttatatactttaattactccttaaaacttgtgtctaagagctaaaa 27312142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 29452628 - 29452570
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| |||||||||||||||||||||||| |||||| |||||    
T  29452628 aaacacacaaatatttatatactttaattactccttaaaacttgtgccaagagttaaaa 29452570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 320 - 376
Target Start/End: Complemental strand, 7156321 - 7156265
Alignment:
Q  320 acacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||| |||||||| |||||||| |||||||||||||| |||||||||||||    
T  7156321 acacacaaatatttatatactttaattattccttaaaacttgtatcaagagctaaaa 7156265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 340 - 376
Target Start/End: Complemental strand, 8504797 - 8504761
Alignment:
Q  340 tttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||||||||||||||||||||||||||||    
T  8504797 tttaattactccttaaaacttgtgtcaagagctaaaa 8504761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 322 - 380
Target Start/End: Complemental strand, 31171072 - 31171014
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaatatc 380  Q
    |||||||| |||||||| |||||||||||||||||| |||||  |||| ||||||||||    
T  31171072 acacaaatatttatatactttaattactccttaaaatttgtgctaagaactaaaatatc 31171014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 8504766 - 8504733
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  8504766 ctaaaacatcaaaagaaaaggaatggagggagta 8504733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 27312147 - 27312114
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  27312147 ctaaaacatcaaaagaaaaggaatggagggagta 27312114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 2543325 - 2543358
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  2543325 ctaaaacatcaaaagaaaacgaatggagggagta 2543358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 32274678 - 32274711
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  32274678 ctaaaacatcaaaagaaaatgaatggagggagta 32274711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 18742191 - 18742223
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| |||||||||||||    
T  18742191 taaaacatcaaaagaaaagaaatggagggagta 18742223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 149; Significance: 2e-78; HSPs: 52)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18997135 - 18996967
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  18997135 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 18997036  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18997035 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18996967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 18999674 - 18999506
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  18999674 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 18999575  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18999574 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 18999506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 29371647 - 29371815
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  29371647 tcattaaattcacatgtgataaaccaaaggtcacaagtactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29371746  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29371747 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 29371815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 32677586 - 32677754
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  32677586 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 32677685  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  32677686 taaaacatcaaaagttttggtatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 32677754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 39528917 - 39528749
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  39528917 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 39528818  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39528817 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 39528749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 41349480 - 41349648
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  41349480 tcattaaattcacatgtgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 41349579  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41349580 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 41349648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 1352105 - 1352273
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  1352105 tcattaaattcacatgtgataaactaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 1352204  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1352205 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 1352273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 139; E-Value: 2e-72
Query Start/End: Original strand, 1 - 179
Target Start/End: Complemental strand, 28228604 - 28228426
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| |||||| |||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| ||    
T  28228604 tcattaaattcacatgtgataaaccaaatgtcacagctactttaatagtttattgtattttccaacaagggtaaacttgagaaaacaataataaattcac 28228505  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacttcataatt 179  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||| |||||    
T  28228504 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagagagtagttcttaatt 28228426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 39807088 - 39807256
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||| ||||| ||    
T  39807088 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacgagggtaaacttgagaaaacaataacaaattcac 39807187  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39807188 taaaacatcaaaagttttgtaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggaagta 39807256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 36737943 - 36738111
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  36737943 tcattaaattcacatgtgataaatcaaatgtcacaactactttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcac 36738042  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||  ||||||||| |||||||||||||||||||||||||||||| | ||||||    
T  36738043 taaaacatcaaaagttttaaaatatagttaaagttctaaaacatcaaaagaaaaggaatgaatggagta 36738111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 8e-66
Query Start/End: Original strand, 6 - 169
Target Start/End: Complemental strand, 55366071 - 55365908
Alignment:
Q  6 aaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaa 105  Q
    |||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||    
T  55366071 aaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttctaacaagggtaaacttgagaaaacaataataaattcactaaaa 55365972  T
Q  106 catcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||  |||| |||||||||||||||||||||||||||||||||||||||| ||||||||    
T  55365971 catcaaaaaatttgaaatatagttgaagttctaaaacatcaaaagaaaaggaatgaagggagta 55365908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 21974315 - 21974152
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttacta 102  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||||||||| ||||    
T  21974315 attaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcacta 21974216  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21974215 aaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21974152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 21996746 - 21996583
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttacta 102  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||||||||| ||||    
T  21996746 attaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcacta 21996647  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||    
T  21996646 aaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaagaaatggaggga 21996583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 123; E-Value: 7e-63
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 38855485 - 38855323
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| ||||||| || ||||| |||| ||||||||||||||||||||| ||    
T  38855485 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgtttttcaacaaggataaaattgagaaaacaataataaattcac 38855386  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggag 163  Q
    ||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||    
T  38855385 taaaacatcaaaagttttggaatatagttgatgttttaaaacatcaaaagaaaaggaatggag 38855323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 120; E-Value: 5e-61
Query Start/End: Original strand, 3 - 166
Target Start/End: Complemental strand, 22157424 - 22157261
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttacta 102  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||| ||||| |||||||||| ||| ||||||| |||||||||||||||||||| ||||    
T  22157424 attaaattcacatgtgataaaccaaaggtcacaactactttaatattttatggtgttttccaacaaaggtaaacctgagaaaacaataataaattcacta 22157325  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||    
T  22157324 aaatatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaagaaatggaggga 22157261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 1 - 162
Target Start/End: Original strand, 29014799 - 29014960
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||  || ||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||| ||    
T  29014799 tcattaaattcacatgtgataaaccaaaaatcgcaactactttaatagtttaatgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 29014898  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgga 162  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| |||| |||||||    
T  29014899 taaaacatcaaaagttttggaatatagttgaagttctaaaacataaaaaaaaaaagaatgga 29014960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 114; E-Value: 2e-57
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 39518575 - 39518422
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||| ||    
T  39518575 tcattaaattcacatgtgataaatcaaatgtcataactactttaatagtttattgtgttttccaacaaggataaacttgagaaaacaataataaattcac 39518476  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||| ||||||||||||| ||||||||||||||| ||||||||||||| ||||    
T  39518475 taaaatatcaaaagttttgaaatatagttgaagttttaaaacatcaaaaaaaaa 39518422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 32840116 - 32839947
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||| |||||||||||||||||||||| | |||||  |||||| |||||| |||||| |||| ||    
T  32840116 tcattaaattcacatgtgataaaccaaatgtcacaactattttaatagtttattgtgttttctaacaaggacaaacttaagaaaataataat-aattcac 32840018  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    |||||||||||||  |||  ||||||||||||||||||||| || ||||||||| ||||||||||||||||    
T  32840017 taaaacatcaaaaaatttaaaatatagttgaagttctaaaatataaaaagaaaatgaatggagggagtact 32839947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 70; E-Value: 3e-31
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 49040955 - 49041107
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattg---tgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    ||||||||||||| ||||||| |||||||| ||||| ||||||||||||  ||   |||||| || ||||||||||| || |||||  ||| ||||| ||    
T  49040955 attaaattcacatttgataaaccaaaggtcccaactcctttaatagttttatggtttgtttttcaacaagggtaaacgtgggaaaa--atattaaatata 49041052  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||  |||||||| |||||||||||||||||||||||||||||||    
T  49041053 ctaaaacatcaaatattttggaacatagttgaagttctaaaacatcaaaagaaaa 49041107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 32840140 - 32840202
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaatatc 380  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  32840140 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaatatc 32840202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 32677563 - 32677505
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  32677563 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 32677505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 322 - 408
Target Start/End: Complemental strand, 41349453 - 41349367
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaatatcnnnnnnnnnggaatggagggagtatata 408  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||||||||| |||         |||||||||||||||||||    
T  41349453 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaacatcaaaagaaaaggaatggagggagtatata 41349367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 18997158 - 18997216
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18997158 aaacgcacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 18997216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 18999697 - 18999755
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18999697 aaacgcacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 18999755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 29014776 - 29014718
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||    
T  29014776 aaacacacaaatgtttatatactttaattacttcttaaaacttgtgtcaagagctaaaa 29014718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 29371624 - 29371566
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||    
T  29371624 aaacacacaaatgtttatatactttaattactccttaaaatttgtgtcaagagctaaaa 29371566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 36737920 - 36737862
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||    
T  36737920 aaacacacaaatgtttatatactttaattattccttaaaacttgtgtcaagagctaaaa 36737862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 39518598 - 39518656
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||    
T  39518598 aaacacacaaatgtttatatactttaattactcattaaaacttgtgtcaagagctaaaa 39518656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 49319416 - 49319344
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactt 172  Q
    |||||||||||||| |||| ||||  |||| |||||||||||||||||||||||||||||||||| |||||||    
T  49319416 ctaaaacatcaaaatttttagaatgaagtttaagttctaaaacatcaaaagaaaaggaatggaggaagtactt 49319344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 1352078 - 1352024
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  1352078 acacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 1352024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 39528944 - 39528998
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  39528944 acacaaatgtttatatactttaattactccttaaaacttgtgtcaaaagctaaaa 39528998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 39807061 - 39807007
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  39807061 acacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 39807007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 22157455 - 22157507
Alignment:
Q  324 acaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  22157455 acaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 22157507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 55367747 - 55367801
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| ||||||||||||||||||||||| |||||||||||||    
T  55367747 acacaaatatttatatactttaattactccttaaaacttgtatcaagagctaaaa 55367801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 21974346 - 21974398
Alignment:
Q  324 acaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  21974346 acaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaa 21974398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 21996777 - 21996829
Alignment:
Q  324 acaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  21996777 acaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaa 21996829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 38855511 - 38855566
Alignment:
Q  321 cacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||    
T  38855511 cacacaaatatttatatattttaattactccttaaaacttgtgccaatagctaaaa 38855566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 171
Target Start/End: Complemental strand, 1352029 - 1351994
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  1352029 ctaaaacatcaaaagaaaaggaatggagggagtact 1351994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 28228626 - 28228687
Alignment:
Q  318 aaacacacaaatgtttatataatttaat---tactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||   |||| ||||||||||||||||||||| ||||    
T  28228626 aaacacacaaatgtttatatactttaataattacttcttaaaacttgtgtcaagagccaaaa 28228687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 136 - 170
Target Start/End: Original strand, 39528993 - 39529027
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||||||    
T  39528993 ctaaaacatcaaaagaaaaggaatggagggagtac 39529027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 18997211 - 18997244
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  18997211 ctaaaacatcaaaagaaaaggaatggagggagta 18997244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 18999750 - 18999783
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  18999750 ctaaaacatcaaaagaaaaggaatggagggagta 18999783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 29014723 - 29014690
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  29014723 ctaaaacatcaaaagaaaaggaatggagggagta 29014690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 36737867 - 36737834
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  36737867 ctaaaacatcaaaagaaaaggaatggagggagta 36737834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 38855561 - 38855594
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  38855561 ctaaaacatcaaaagaaaaggaatggagggagta 38855594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 39518651 - 39518684
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  39518651 ctaaaacatcaaaagaaaaggaatggagggagta 39518684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 41349404 - 41349371
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  41349404 ctaaaacatcaaaagaaaaggaatggagggagta 41349371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Original strand, 46878980 - 46879012
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  46878980 taaaacatcaaaagaaaaggaatggagggagta 46879012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 70 - 144
Target Start/End: Complemental strand, 837442 - 837370
Alignment:
Q  70 ggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacat 144  Q
    ||||||||||| |||| |||| ||| | |||||||| ||||||| |||| |||| ||||||||||||||||||||    
T  837442 ggtaaacttgaaaaaa-aatattaattatactaaaatatcaaaa-ttttagaatttagttgaagttctaaaacat 837370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 29371571 - 29371538
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  29371571 ctaaaacatcaaaagaaaatgaatggagggagta 29371538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 32677510 - 32677477
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  32677510 ctaaaacatcaaaagaaaatgaatggagggagta 32677477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 39807012 - 39806979
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| ||||||||    
T  39807012 ctaaaacatcaaaagaaaaggaatgaagggagta 39806979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 6e-76; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 47669287 - 47669119
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  47669287 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 47669188  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  47669187 taaaacatcaaaaattttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 47669119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 46220427 - 46220257
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||  ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  46220427 tcattaaattcacatgtgataaactaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 46220328  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||    
T  46220327 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatagagggagtact 46220257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 138; E-Value: 8e-72
Query Start/End: Original strand, 1 - 170
Target Start/End: Complemental strand, 9831671 - 9831502
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||    
T  9831671 tcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttattgtgttttccaacaagggtaaacttgagaaaataataacaaattcac 9831572  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9831571 taaaacatcaaaagttttggaatatagttgaaattctaaaacatcaaaagaaaaggaatggagggagtac 9831502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 10737810 - 10737978
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  10737810 tcattaaattcagatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 10737909  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| ||||||||    
T  10737910 taaaacatcaaaagttttagaatatagttgaagttctaaaacattaaaagaaaaggaatgaagggagta 10737978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 176
Target Start/End: Complemental strand, 18127018 - 18126844
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||| |||||||| |||||||||||| |||||||||||||||||||||||||||||||| ||    
T  18127018 tcattaaattcacatgtgataaaccaaaagtcacaactactt-aatagtttgttgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 18126920  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtacttcata 176  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  18126919 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtaattcata 18126844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 133; E-Value: 8e-69
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4817437 - 4817269
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||  |||  |||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||    
T  4817437 tcattaaattcacatgtgataaactaaatatcacaactaccttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaatgataaattcac 4817338  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4817337 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 4817269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 131; E-Value: 1e-67
Query Start/End: Original strand, 1 - 170
Target Start/End: Original strand, 3384704 - 3384871
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  3384704 tcattaaattcacatgtgataaatcaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataataaattcac 3384803  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtac 170  Q
    |||||||||||||||||||  | |||||||| |||||||||||||||||||||| ||||| |||||||||    
T  3384804 taaaacatcaaaagttttg--aaatagttgaggttctaaaacatcaaaagaaaaagaatgaagggagtac 3384871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 48564985 - 48564818
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||    
T  48564985 tcattaaattcacatgtgataaaccaaaagtcacaactactttaatagtttattgtgttttccatcaagggtaaacttgagaaaacaataataaattcac 48564886  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||    
T  48564885 taaaacatcaaaatttttggaatatagttgaagttttaaaacatc-aaagaaaagtaatggagggagta 48564818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 4055652 - 4055484
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| || ||||||||||||| |||  |||||||||||||  |||||||||||||||||||||||||| |||| ||    
T  4055652 tcattaaattcacatgtgataaaccaaatgttacaactactttaacagtgaattgtgttttccaataagggtaaacttgagaaaacaataattaattcac 4055553  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4055552 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 4055484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 124; E-Value: 2e-63
Query Start/End: Original strand, 1 - 168
Target Start/End: Complemental strand, 7414375 - 7414208
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||    
T  7414375 tcattaaattcacatatgataaaccaaatgtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 7414276  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagt 168  Q
    |||||||||||||  |||  ||||||||||||||||||||||||||||| |||| |||||||||||||    
T  7414275 taaaacatcaaaaaatttaaaatatagttgaagttctaaaacatcaaaaaaaaatgaatggagggagt 7414208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 118; E-Value: 7e-60
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 8889610 - 8889457
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| |||||||  ||| |||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||    
T  8889610 tcattaaattcacatgtgataaactaaaagtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 8889511  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||| ||||    
T  8889510 taaaacatcaaaagttttggaatatagttgaagttctaaaacataaaaaaaaaa 8889457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 67 - 169
Target Start/End: Original strand, 1236205 - 1236307
Alignment:
Q  67 aagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||    
T  1236205 aagggtaaacttgagaaaacaataataaattcactaaaccatcaaaagttttggaatatagttaaagttctaaaacatcaaaagaaaatgaatggaggga 1236304  T
Q  167 gta 169  Q
    |||    
T  1236305 gta 1236307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 82; E-Value: 2e-38
Query Start/End: Original strand, 1 - 149
Target Start/End: Complemental strand, 39241320 - 39241172
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggt-aaacttgagaaaacaataataaattta 99  Q
    ||||||||||||||| |||||||||||| |||||||||||||||||||||||| ||||||| || |||| || |||||||| | |||||||||||||| |    
T  39241320 tcattaaattcacatgtgataaatcaaaagtcacaactactttaatagtttatggtgtttttcaacaagagtaaaacttgatacaacaataataaattca 39241221  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaa 149  Q
    || ||||| ||||||||||| |||||||||||| ||||||||||| ||||    
T  39241220 ctgaaacaacaaaagttttgaaatatagttgaa-ttctaaaacattaaaa 39241172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 100 - 172
Target Start/End: Complemental strand, 33020275 - 33020203
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactt 172  Q
    ||||||||||||||||||||||| | |||| ||| ||||||||||||||||||||||||||||||||||||||    
T  33020275 ctaaaacatcaaaagttttggaaaaaagtttaagctctaaaacatcaaaagaaaaggaatggagggagtactt 33020203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 90 - 169
Target Start/End: Original strand, 1749521 - 1749600
Alignment:
Q  90 aataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||| |||||||||||||||||||||| ||||| || ||||||||||||||||||||||||||||| |||| ||||    
T  1749521 aataaattcactaaaacatcaaaagttttggtatataattaaagttctaaaacatcaaaagaaaaggaatagaggaagta 1749600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 1236156 - 1236098
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  1236156 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 1236098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 3 - 146
Target Start/End: Complemental strand, 26842606 - 26842462
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttat---tgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    ||||||||||||| |||||| ||||| ||||||| | ||| ||||||||     |||||||| || ||||| ||||||||| ||||  ||| ||||| ||    
T  26842606 attaaattcacatgtgataagtcaaatgtcacaatttcttgaatagttttacgatgtgtttttcaacaaggataaacttgaaaaaa--atattaaatata 26842509  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatca 146  Q
    |||||||||||||  ||||| ||||||||||||||||||||||||||    
T  26842508 ctaaaacatcaaatattttgaaatatagttgaagttctaaaacatca 26842462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 320 - 376
Target Start/End: Original strand, 18127043 - 18127099
Alignment:
Q  320 acacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  18127043 acacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 18127099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 3384681 - 3384623
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||    
T  3384681 aaacacacaaacgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 3384623  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 9831698 - 9831752
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  9831698 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 9831752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 46220454 - 46220508
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  46220454 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 46220508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 47669314 - 47669368
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  47669314 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 47669368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 320 - 376
Target Start/End: Original strand, 4817462 - 4817518
Alignment:
Q  320 acacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||    
T  4817462 acacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagttaaaa 4817518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 4055675 - 4055733
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| ||||||||||||||||||||||||||||||| |||||    
T  4055675 aaacacacaaatatttatatactttaattactccttaaaacttgtgtcaagagttaaaa 4055733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 8889634 - 8889692
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||||| |||||| |||||||||| ||||||||||||||||||||||||||    
T  8889634 aaacacacaaatgtatatatactttaattacttcttaaaacttgtgtcaagagctaaaa 8889692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 10737787 - 10737729
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| ||||||| ||||||||||||||| |||||||||||||    
T  10737787 aaacacacaaatatttatatactttaattgctccttaaaacttgtatcaagagctaaaa 10737729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 48565008 - 48565066
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||| |||||||||| |||||||||||||||||||||||||||| ||| ||||    
T  48565008 aaacacacaagtgtttatatactttaattactccttaaaacttgtgtcaaaagccaaaa 48565066  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 169
Target Start/End: Original strand, 33846764 - 33846935
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at----tgtgttttccagcaagggtaaacttgagaaaacaataat-aaat 96  Q
    ||||||||||||| | |||| ||||| |||||||||  ||||||||||| ||    ||||||||  | |||||||||||||||| ||| || ||| ||||    
T  33846764 attaaattcacatgtaataagtcaaatgtcacaacttatttaatagttttatggtgtgtgttttttaacaagggtaaacttgaggaaaaaaaaattaaat 33846863  T
Q  97 ttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
     |||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||||  |||||||||||||    
T  33846864 atactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaaaa-aaatggagggagta 33846935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 169
Target Start/End: Complemental strand, 33947214 - 33947043
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at----tgtgttttccagcaagggtaaacttgagaaaacaataat-aaat 96  Q
    ||||||||||||| | |||| ||||| |||||||||  ||||||||||| ||    ||||||||  | |||||||||||||||| ||| || ||| ||||    
T  33947214 attaaattcacatgtaataagtcaaatgtcacaacttatttaatagttttatggtgtgtgttttttaacaagggtaaacttgaggaaaaaaaaattaaat 33947115  T
Q  97 ttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
     |||| ||||||||||  ||||  |||| | |||||||  ||||||||||||||||||  |||||||||||||    
T  33947114 atactgaaacatcaaatattttaaaatacacttgaagtcttaaaacatcaaaagaaaa-aaatggagggagta 33947043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 39241343 - 39241401
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| |||||||||| ||||||| || |||||||||||||||    
T  39241343 aaacacacaaatatttatatactttaattacttcttaaaatttatgtcaagagctaaaa 39241401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 10737734 - 10737701
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  10737734 ctaaaacatcaaaagaaaaggaatggagggagta 10737701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 46220503 - 46220536
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  46220503 ctaaaacatcaaaagaaaaggaatggagggagta 46220536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 47669363 - 47669396
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  47669363 ctaaaacatcaaaagaaaaggaatggagggagta 47669396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 136 - 168
Target Start/End: Complemental strand, 1236103 - 1236071
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagt 168  Q
    |||||||||||||||||||||||||||||||||    
T  1236103 ctaaaacatcaaaagaaaaggaatggagggagt 1236071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 41 - 112
Target Start/End: Complemental strand, 37875920 - 37875849
Alignment:
Q  41 tttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaa 112  Q
    ||||||||| |  ||| |||| || ||||| ||||||||||||||||| | ||||| |||||||||||||||    
T  37875920 tttaatagtatggtgtatttttcaacaaggataaacttgagaaaacaacattaaatatactaaaacatcaaa 37875849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 138 - 169
Target Start/End: Original strand, 48565063 - 48565094
Alignment:
Q  138 aaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||    
T  48565063 aaaacatcaaaagaaaaggaatggagggagta 48565094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 166
Target Start/End: Original strand, 9831747 - 9831777
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||||    
T  9831747 ctaaaacatcaaaagaaaaggaatggaggga 9831777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 318 - 355
Target Start/End: Original strand, 7414399 - 7414436
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaa 355  Q
    |||||||||||| |||||||| ||||||||||||||||    
T  7414399 aaacacacaaatatttatatactttaattactccttaa 7414436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 8889687 - 8889720
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||| |||||||||||||||||||    
T  8889687 ctaaaacatcaaaataaaaggaatggagggagta 8889720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 33023428 - 33023461
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||| ||||||||||||||||||||||||||    
T  33023428 ctaaaacgtcaaaagaaaaggaatggagggagta 33023461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 37875760 - 37875727
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||| |||||||||||||    
T  37875760 ctaaaacatcaaaagaaaagaaatggagggagta 37875727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 186 - 230
Target Start/End: Complemental strand, 51776593 - 51776549
Alignment:
Q  186 ctatttagtgtagtgctagataggtgaaacacctaccattatgga 230  Q
    ||||||| ||| |||||| |||||||||||||| |||||||||||    
T  51776593 ctatttaatgtggtgctaaataggtgaaacacccaccattatgga 51776549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 143; Significance: 9e-75; HSPs: 21)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 1 - 167
Target Start/End: Complemental strand, 15233923 - 15233757
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| ||    
T  15233923 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaagggtaaacttgagaaaacaataacaaattcac 15233824  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggag 167  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||    
T  15233823 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatagagggag 15233757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 43040958 - 43041126
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||| ||    
T  43040958 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttatggtgttttccaacaagggtaaaattgagaaaacaataataaattcac 43041057  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  43041058 taaaacatcaaaagttttggaatatagttgaagttttaaaacatcaaaagaaaaggaatggagggagta 43041126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 35793016 - 35793183
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||||||||||  |||||| |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||  |    
T  35793016 tcattaaattcacatgcgataaaccaaatgtcacaactactttaatagtttattgtgttttccaacaagggtaaacttga-aaaacaataataaattctc 35793114  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35793115 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaagaatggagggagta 35793183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41252583 - 41252415
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||||||||| ||||||| ||||| |||||||||||| ||||||||||||| ||    
T  41252583 tcattaaattcacatgtgataaaacaaatgtcacaactactttaatagtttattgtattttccaacaaggataaacttgagaacacaataataaattcac 41252484  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||    
T  41252483 taaaacatcaaaagttttggaatatatttgaagttctaaaacataaaaagaaaaggaatggagggagta 41252415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 31296251 - 31296083
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||  ||||||||||||||||||||||||||||||| || ||| |||||| ||||||||||||||||||||| ||    
T  31296251 tcattaaattcacatgtgataaaccaaatatcacaactactttaatagtttattgtgtttttcaacaaaggtaaatttgagaaaacaataataaattcac 31296152  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  31296151 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaaagaatggaaggagta 31296083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 41643062 - 41642891
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||||| |||| ||||||||||||||||||||||||||||||||||||| ||||||||||| || |||||||||||||||||||||||||||| ||    
T  41643062 tcattaaattaacatgtgataaatcaaaggtcacaactactttaatagtttatggtgttttccagaaaaggtaaacttgagaaaacaataataaattcac 41642963  T
Q  101 taaaacatcaaaagttttggaa--tatagttgaagttct-aaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||  |||||||||| |||| |||||||||||||||||| |||||||||||||    
T  41642962 taaaacatcaaaagttttggaatatatagttgaaattctaaaaacatcaaaagaaaagaaatggagggagta 41642891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 112; E-Value: 3e-56
Query Start/End: Original strand, 1 - 172
Target Start/End: Original strand, 44104656 - 44104836
Alignment:
Q  1 tcattaaattcacatatgataaatca--aaggtcacaactactttaatagtttattgtgttttccagcaa-------gggtaaacttgagaaaacaataa 91  Q
    ||||||||||||||| ||||||| ||  |||||||||||||| ||||||||||||||||||||||| |||       ||||||||||||||||| |||||    
T  44104656 tcattaaattcacatgtgataaaccataaaggtcacaactaccttaatagtttattgtgttttccaacaatttataagggtaaacttgagaaaataataa 44104755  T
Q  92 taaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtactt 172  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  44104756 taaattcactaaaacatcaaaagttttgaaatatagttgaagttctaaaacatcaaaagaaaaggaacggagggagtactt 44104836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 102; E-Value: 3e-50
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 31903489 - 31903641
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||  ||||||||||||||||||||||||||||| ||||||||||  ||||||||||| || |||||||||||||||||||    
T  31903489 tcattaaattcacatgtgataatccaaaggtcacaactactttaatagtttatggtgttttccaataagggtaaact-gataaaacaataataaatttac 31903587  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||  ||||||||||| |||||||||||||||||||||| ||||    
T  31903588 taaaacatcaaaaaatttggaatatatttgaagttctaaaacatcaaaaaaaaa 31903641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 7e-23
Query Start/End: Original strand, 3 - 154
Target Start/End: Complemental strand, 21727838 - 21727684
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-attgtgttttc--cagcaagggtaaacttgagaaaacaataataaattta 99  Q
    ||||||||||||| ||||||  |||| | ||||||| |||||||||||| ||||||||||   || |||||||||| ||| | ||| |||| ||  | ||    
T  21727838 attaaattcacatgtgataaggcaaatgccacaactcctttaatagttttattgtgtttttttcaacaagggtaaatttggggaaaaaatattagttata 21727739  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    | |||||||||||  ||||| ||||||||||||||||||||||||||||||||||    
T  21727738 ccaaaacatcaaatattttgaaatatagttgaagttctaaaacatcaaaagaaaa 21727684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 41252607 - 41252665
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  41252607 aaacacacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 41252665  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 100 - 169
Target Start/End: Original strand, 10118660 - 10118729
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||| ||||||| |||||||||||||||||||||||||||    
T  10118660 ctaaaacatcaaaagttttggaataaagtttaagctctaaaatatcaaaagaaaaggaatggagggagta 10118729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 324 - 376
Target Start/End: Original strand, 15233952 - 15234004
Alignment:
Q  324 acaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  15233952 acaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 15234004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 35792993 - 35792935
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||    
T  35792993 aaacacacaaatgtttatatactttaattactccttaaaacttatgtcaagagttaaaa 35792935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 44104632 - 44104574
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||||||||||||||||| |||||| || |||||    
T  44104632 aaacacacaaatgtttatatactttaattactccttaaaacttatgtcaaaagttaaaa 44104574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 321 - 376
Target Start/End: Complemental strand, 43040932 - 43040877
Alignment:
Q  321 cacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||| |||||||| |||||||||||||||||||||||| ||| ||||||||    
T  43040932 cacacaaatatttatatattttaattactccttaaaacttgtgccaatagctaaaa 43040877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 136 - 171
Target Start/End: Complemental strand, 43040882 - 43040847
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||||||||||||||||||||||||||||    
T  43040882 ctaaaacatcaaaagaaaaggaatggagggagtact 43040847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 21727863 - 21727921
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||| |||||| |||||||| || ||||||||||||| ||||||| ||||||||||||    
T  21727863 aaacatacaaatatttatatacttcaattactccttaagacttgtgccaagagctaaaa 21727921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Complemental strand, 10112372 - 10112339
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  10112372 ctaaaacatcaaaagaaaaggaatggagggagta 10112339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 15233999 - 15234032
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||||||||||||    
T  15233999 ctaaaacatcaaaagaaaaggaatggagggagta 15234032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 36963200 - 36963131
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||  ||||| |||| |||| || ||||||||||| |||||||||||||| ||| |||||    
T  36963200 ctaaaacatcaaattttttgaaataaagtttaaattctaaaacattaaaagaaaaggaatagagcgagta 36963131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 137 - 169
Target Start/End: Complemental strand, 44104578 - 44104546
Alignment:
Q  137 taaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||    
T  44104578 taaaacatcaaaagaaaaggaatggagggagta 44104546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103 (Bit Score: 130; Significance: 5e-67; HSPs: 2)
Name: scaffold0103
Description:

Target: scaffold0103; HSP #1
Raw Score: 130; E-Value: 5e-67
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 44788 - 44619
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||    
T  44788 tcattaaattcacatgtgataaaccaaaggtcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaaaacaataataaattcac 44689  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatca-aaagaaaaggaatggagggagta 169  Q
    |||||| |||||||||||||||||||||||||||||| |||||||| |||||||||||||| ||||||||    
T  44688 taaaacctcaaaagttttggaatatagttgaagttctcaaacatcagaaagaaaaggaatgaagggagta 44619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0103; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 44813 - 44867
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  44813 acacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 44867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 129; Significance: 2e-66; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 8955885 - 8956053
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||| ||||||||||||||||  |||||||||||||| |||||||||| ||||| ||    
T  8955885 tcattaaattcacatgtgataaaccaaaggtcacaactactttaataatttattgtgttttccaataagggtaaacttgataaaacaataacaaattcac 8955984  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||    
T  8955985 taaaacatcaaaagttttgtaatatagttgaagttctaaaacatcaaaaaaaaaggaatggagggagta 8956053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 169
Target Start/End: Complemental strand, 45590910 - 45590742
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||||||| || ||||||| |||||||||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||||||||| |||| ||    
T  45590910 tcattaaattcatatgtgataaaccaaaggtcacaactactttaatagtttattgtgttttccaacaaaggtaaacttgataaaacaataatgaattcac 45590811  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  45590810 taaaacatcaaaagttttagaatatagttgaagttctaaaacatcaaaagaaaatgaatggagggagta 45590742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 1 - 159
Target Start/End: Complemental strand, 34334500 - 34334342
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||| ||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||||||||| ||    
T  34334500 tcattaaattcacatgtgataaaccaaagatcacaactactttaatagtttattgtgtttttcaacaagggtaaacttgagaagacaataataaattcac 34334401  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaat 159  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34334400 taaagcatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaat 34334342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 1 - 169
Target Start/End: Original strand, 33288514 - 33288682
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| |||| |||||||||||||||  ||| |||||||||||||| || ||||||||||||||||||||||||||||| ||    
T  33288514 tcattaaattcacatgtgataaaccaaatgtcacaactactttatcagtatattgtgttttccaacatgggtaaacttgagaaaacaataataaattcac 33288613  T
Q  101 taaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||||||||    
T  33288614 taaaacatcaaaagttttggaatataattgaagttctaaaatatcaaaagaaaagaaatggagggagta 33288682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 106; E-Value: 1e-52
Query Start/End: Original strand, 1 - 171
Target Start/End: Complemental strand, 18835875 - 18835703
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaata--ataaattt 98  Q
    ||||||||||||||| |||||||||||| ||||||||||||||||||||||||  ||||||| | ||||| |||| ||||||||||||||  ||| |||     
T  18835875 tcattaaattcacatgtgataaatcaaatgtcacaactactttaatagtttatgatgttttctaacaaggataaatttgagaaaacaataatatatattc 18835776  T
Q  99 actaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagtact 171  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||  |||| ||||||||||    
T  18835775 actaaaacatcgaaagttttggaatatagttgaagttctaaaacatcaaaagaaaataaatgaagggagtact 18835703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 25 - 163
Target Start/End: Complemental strand, 49162245 - 49162108
Alignment:
Q  25 caaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaata 124  Q
    ||||||| ||||||||||||||||||||| |||||||||| ||||| |||| ||||||||||||||||||||| ||||||||||||||| ||||||||||    
T  49162245 caaaggttacaactactttaatagtttatggtgttttccaacaagg-taaaattgagaaaacaataataaattcactaaaacatcaaaaattttggaata 49162147  T
Q  125 tagttgaagttctaaaacatcaaaagaaaaggaatggag 163  Q
    ||||||||||||| |||||||||||||||| ||||||||    
T  49162146 tagttgaagttctgaaacatcaaaagaaaatgaatggag 49162108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 1 - 154
Target Start/End: Original strand, 50774167 - 50774325
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    |||||||||| |||| ||||||| |||| ||||| |||| |||||||||||||||||||||||| |||| ||||||||||||||||||||||||||| ||    
T  50774167 tcattaaatttacatgtgataaaccaaaagtcacgactaatttaatagtttattgtgttttccaacaagagtaaacttgagaaaacaataataaattcac 50774266  T
Q  101 taaaa-----catcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||      ||||||||||||| ||||||||| ||||||||||||||||||| ||||    
T  50774267 taaaatactgtatcaaaagttttgaaatatagttaaagttctaaaacatcaaaaaaaaa 50774325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 77 - 169
Target Start/End: Original strand, 30469353 - 30469445
Alignment:
Q  77 ttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||    
T  30469353 ttgagaaaacaataataaattcactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatgaagggagta 30469445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 85; E-Value: 4e-40
Query Start/End: Original strand, 70 - 166
Target Start/End: Complemental strand, 39482002 - 39481906
Alignment:
Q  70 ggtaaacttgagaaaacaataataaatttactaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggaggga 166  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||    
T  39482002 ggtaaacctgagaaaacaataataaatttactaaaacatcaaaagttttggaaaatagttgaagttctaaaacatcaaaagaaaagaaatggaggga 39481906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 71; E-Value: 8e-32
Query Start/End: Original strand, 1 - 103
Target Start/End: Complemental strand, 36971216 - 36971115
Alignment:
Q  1 tcattaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttac 100  Q
    ||||||||||||||| ||||||| ||||||||||||||| |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||| ||    
T  36971216 tcattaaattcacatgtgataaaccaaaggtcacaactattttaatagtttattgtgttttccaacaa-ggtaaacttcagaaaacaataataaattcac 36971118  T
Q  101 taa 103  Q
    |||    
T  36971117 taa 36971115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 60; E-Value: 3e-25
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 26025639 - 26025784
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagtttattgtgttttccagcaagggtaaacttgagaaaacaataataaatttacta 102  Q
    ||||||||||||| ||||||  ||||||||||||||| ||| || ||     ||||||| || |||||||||||||| ||||| |||| ||||| |||||    
T  26025639 attaaattcacatgtgataagccaaaggtcacaactagttttatggt-----gtgtttttcaacaagggtaaacttgggaaaa-aatattaaatatacta 26025732  T
Q  103 aaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||  |||||  |||||||||||||||||||| |||||||||||||||||||    
T  26025733 aaatgtcaaatattttggaatatagttgaagtcctaaaacatcaaaagaaaa 26025784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 58; E-Value: 5e-24
Query Start/End: Original strand, 100 - 169
Target Start/End: Complemental strand, 19256255 - 19256186
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||||||||||||||||    
T  19256255 ctaaaacatcaaaagttttggaataaagtttaagctctaaaacatcaaaagaaaaggaatggagggagta 19256186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 8955858 - 8955804
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8955858 acacaaatgtttatatactttaattactccttaaaacttgtgtcaagagctaaaa 8955804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 119 - 169
Target Start/End: Complemental strand, 36016329 - 36016279
Alignment:
Q  119 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36016329 ggaatatagttgaagttctaaaacatcaaaagaaaaggaatggagggagta 36016279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 100 - 154
Target Start/End: Complemental strand, 36968407 - 36968353
Alignment:
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36968407 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaaaaaaa 36968353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 50774144 - 50774086
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  50774144 aaacacacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 50774086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 3 - 154
Target Start/End: Original strand, 33109009 - 33109163
Alignment:
Q  3 attaaattcacatatgataaatcaaaggtcacaactactttaatagttt-at--tgtgttttccagcaagggtaaacttgagaaaacaataataaattta 99  Q
    |||||||| |||| | ||||  ||||||||||||||  ||||||||||| ||  ||||||||  | ||||| ||||||| |||||| |||| ||||| ||    
T  33109009 attaaatttacatgtaataagacaaaggtcacaactcatttaatagttttatggtgtgttttttaacaaggataaacttaagaaaaaaatattaaatata 33109108  T
Q  100 ctaaaacatcaaaagttttggaatatagttgaagttctaaaacatcaaaagaaaa 154  Q
    ||||||||||||   ||||  |||||||||||||| ||||||||| |||||||||    
T  33109109 ctaaaacatcaattattttaaaatatagttgaagtcctaaaacattaaaagaaaa 33109163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 33288486 - 33288432
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||| |||||||||||||||||||||||||||| ||||||||    
T  33288486 acacaaatgtttatatactttaattactccttaaaacttgtgtcaatagctaaaa 33288432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 36971239 - 36971297
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||||||    
T  36971239 aaacacacaaatgtttatatactttaattacttcttaaaacttgtgtcaaaagctaaaa 36971297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 322 - 376
Target Start/End: Original strand, 39482057 - 39482111
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  39482057 acacaaatatttatatactttaattactccttaaaacttgtgtcaagagctaaaa 39482111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 318 - 376
Target Start/End: Original strand, 45590933 - 45590991
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||||||||||||||| ||||||||||||||| ||||| |||||||||||||||    
T  45590933 aaacacacaaatgtttatatactttaattactccttacaacttatgtcaagagctaaaa 45590991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 322 - 376
Target Start/End: Complemental strand, 30469295 - 30469241
Alignment:
Q  322 acacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||||||| |||||||| |||||||||| |||||||||||||||||||| |||||    
T  30469295 acacaaatatttatatactttaattacttcttaaaacttgtgtcaagagttaaaa 30469241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 321 - 376
Target Start/End: Original strand, 49162282 - 49162337
Alignment:
Q  321 cacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||||||| |||||||| ||||||||||| |||||||||||| ||| ||||||||    
T  49162282 cacacaaatatttatatactttaattactctttaaaacttgtgccaatagctaaaa 49162337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 135 - 169
Target Start/End: Original strand, 19257103 - 19257137
Alignment:
Q  135 tctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||||||||||||||||||||    
T  19257103 tctaaaacatcaaaagaaaaggaatggagggagta 19257137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 318 - 363
Target Start/End: Original strand, 18835898 - 18835943
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtg 363  Q
    |||||||||||| |||||||| |||||||||||||||||| |||||    
T  18835898 aaacacacaaatatttatatattttaattactccttaaaatttgtg 18835943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 136 - 166
Target Start/End: Complemental strand, 8955809 - 8955779
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggaggga 166  Q
    |||||||||||||||||||||||||||||||    
T  8955809 ctaaaacatcaaaagaaaaggaatggaggga 8955779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 318 - 376
Target Start/End: Complemental strand, 26025614 - 26025556
Alignment:
Q  318 aaacacacaaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    ||||| |||||| ||| |||| |||||||||||| ||| ||||||| ||||||||||||    
T  26025614 aaacatacaaatatttctatactttaattactccctaagacttgtgccaagagctaaaa 26025556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 326 - 376
Target Start/End: Complemental strand, 33108976 - 33108926
Alignment:
Q  326 aaatgtttatataatttaattactccttaaaacttgtgtcaagagctaaaa 376  Q
    |||| ||||||||||||||||| | ||||| |||||||||||||| |||||    
T  33108976 aaatatttatataatttaattatttcttaagacttgtgtcaagagttaaaa 33108926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 45590986 - 45591019
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    ||||||||||||||||||| ||||||||||||||    
T  45590986 ctaaaacatcaaaagaaaatgaatggagggagta 45591019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 136 - 169
Target Start/End: Original strand, 49162332 - 49162365
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagta 169  Q
    |||||||||||||||||| |||||||||||||||    
T  49162332 ctaaaacatcaaaagaaagggaatggagggagta 49162365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 136 - 168
Target Start/End: Original strand, 39482106 - 39482138
Alignment:
Q  136 ctaaaacatcaaaagaaaaggaatggagggagt 168  Q
    |||||||||||||||||||| ||||||||||||    
T  39482106 ctaaaacatcaaaagaaaagaaatggagggagt 39482138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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