View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_high_73 (Length: 298)
Name: NF20869_high_73
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_high_73 |
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Alignment Details
Target: chr4 (Bit Score: 261; Significance: 1e-145; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 261; E-Value: 1e-145
Query Start/End: Original strand, 11 - 283
Target Start/End: Complemental strand, 50528077 - 50527805
Alignment:
| Q |
11 |
caaaggtgaaagggagttgaaaacgcgtagaagagtaccaagagataaagaatggtctttaattgggaggcaatcaataataaggacgtatcaaacaaca |
110 |
Q |
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| T |
50528077 |
caaaggtgaaagggagttgaaaacgcgtagaagagtaccaagagacaaagaatggtctttaattgggaggcaatcaataataaggacgtatcaaacaaca |
50527978 |
T |
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| Q |
111 |
tagggttgcgtgcacgactttgcaaaaattagggattccatctgttttttgtagccatgccattttctattgatgaatcggtgcaacaccaacacattcc |
210 |
Q |
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| T |
50527977 |
tagggttgcgtgcacgactttgcaaaaattagggattccatctgttttttgtagccatgccattttctattgatgaatcggtgcaacaccaacacgttcc |
50527878 |
T |
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| Q |
211 |
aagtaaaattccaccaatagtattttcaggtgagtttttcagtagtattttatgaagtttgaatacttaaaac |
283 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |
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| T |
50527877 |
aagtaaaattccaccaatagtattttcaggtgagtttttcagtagtattttatgaagtttgaatacttcaaac |
50527805 |
T |
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