View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_high_76 (Length: 284)
Name: NF20869_high_76
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_high_76 |
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Alignment Details
Target: chr5 (Bit Score: 273; Significance: 1e-153; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 273; E-Value: 1e-153
Query Start/End: Original strand, 1 - 273
Target Start/End: Original strand, 2592033 - 2592305
Alignment:
| Q |
1 |
tccaccattgatagagaataatgtggaaaacagcatggtgccaattgatcaagtgcaatcttgtaatatggatgaggaaggaggagagttattaacattg |
100 |
Q |
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| T |
2592033 |
tccaccattgatagagaataatgtggaaaacagcatggtgccaattgatcaagtgcaatcttgtaatatggatgaggaaggaggagagttattaacattg |
2592132 |
T |
|
| Q |
101 |
gagtcattgcaattgcaaagacaagaagagttgaatgaatgggtggaaactcaacaacaatgtcctagctttattttcagctgggagagtgttgaaggac |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2592133 |
gagtcattgcaattgcaaagacaagaagagttgaatgaatgggtggaaactcaacaacaatgtcctagctttattttcagctgggagagtgttgaaggac |
2592232 |
T |
|
| Q |
201 |
aaattggaggtgaagaacaagtactagtaccaaactcatcacatatgggaacacctaattcactttctccttt |
273 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2592233 |
aaattggaggtgaagaacaagtactagtaccaaactcatcacatatgggaacacctaattcactttctccttt |
2592305 |
T |
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