View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_high_97 (Length: 252)
Name: NF20869_high_97
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_high_97 |
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Alignment Details
Target: chr8 (Bit Score: 229; Significance: 1e-126; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 229; E-Value: 1e-126
Query Start/End: Original strand, 17 - 245
Target Start/End: Complemental strand, 26610833 - 26610605
Alignment:
| Q |
17 |
aatgtttgtgagtgaagtgaatgtcttaaatggtgaagctttttaaagatgagaggtggagtgtggctagatttggcagcgtgttaaccggaagtatggc |
116 |
Q |
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| T |
26610833 |
aatgtttgtgagtgaagtgaatgtcttaaatggtgaagctttttaaagatgagaggtggagtgtggctagatttggcagcgtgttaaccggaagtatggc |
26610734 |
T |
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| Q |
117 |
ctatagctcatggtgtgtggtccatttggtgcatgttgagtcagttttcataacagggctttcaagtgtcttgcggttttctaggcattgtctccctcgt |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
26610733 |
ctatagctcatggtgtgtggtccatttggtgcatgttgagtcagttttcataacagggctttcaagtgtcttgcggttttctaggcattgtctccctcgt |
26610634 |
T |
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| Q |
217 |
ggcaatcaaattattaatctctttctgtg |
245 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
26610633 |
ggcaatcaaattattaatctctttctgtg |
26610605 |
T |
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