View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF20869_high_99 (Length: 250)
Name: NF20869_high_99
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF20869_high_99 |
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Alignment Details
Target: chr7 (Bit Score: 215; Significance: 1e-118; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 215; E-Value: 1e-118
Query Start/End: Original strand, 1 - 239
Target Start/End: Complemental strand, 6387021 - 6386783
Alignment:
| Q |
1 |
ttcaataaacctaaaaagaaaattgtctcgtataaaaccgagattgtattgcaccaatatctctcaaatatgatcaatatatcagtcatattaaatcttg |
100 |
Q |
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| T |
6387021 |
ttcaataaactgaaaaagtaaattgtctcgtataaaaccgagattgtattgcaccaatatctctcaaatatgatcaatatatcagtcatattaaatcttg |
6386922 |
T |
|
| Q |
101 |
aaaattacatttattaattactattaaatcaatagttattctttgacttgtccataatagtccaaccgatcctattcaccatgctaaaattcatattcac |
200 |
Q |
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| T |
6386921 |
aaaattacatttattaattactattaaatcaatagttattctttgacttagccataatagtccaaccgatcctattcaccatgctaaaattcatattcac |
6386822 |
T |
|
| Q |
201 |
attgaccatgaattttacagaatcacattgagcattcat |
239 |
Q |
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| T |
6386821 |
atcgaccatgaattttacagaatcacattgagcattcat |
6386783 |
T |
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