View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20869_low_10 (Length: 663)

Name: NF20869_low_10
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20869_low_10
NF20869_low_10
[»] chr7 (22 HSPs)
chr7 (235-495)||(39656148-39656408)
chr7 (353-433)||(39671544-39671624)
chr7 (264-344)||(39660848-39660929)
chr7 (52-157)||(23522447-23522553)
chr7 (52-157)||(15942386-15942491)
chr7 (52-157)||(23532678-23532784)
chr7 (52-97)||(11100006-11100051)
chr7 (235-351)||(39651330-39651446)
chr7 (52-109)||(43173641-43173697)
chr7 (52-108)||(11544590-11544645)
chr7 (52-109)||(44356863-44356919)
chr7 (52-92)||(44359984-44360024)
chr7 (52-100)||(357655-357703)
chr7 (52-100)||(362384-362432)
chr7 (52-108)||(11527186-11527241)
chr7 (177-224)||(11527320-11527367)
chr7 (177-224)||(11544725-11544772)
chr7 (177-224)||(15932375-15932422)
chr7 (315-346)||(39660814-39660845)
chr7 (52-97)||(5328473-5328518)
chr7 (52-97)||(5332798-5332843)
chr7 (52-97)||(15828737-15828782)
[»] chr2 (17 HSPs)
chr2 (52-224)||(26120711-26120883)
chr2 (52-224)||(26126173-26126345)
chr2 (52-224)||(45278810-45278982)
chr2 (52-224)||(45286109-45286281)
chr2 (52-224)||(7310974-7311145)
chr2 (52-224)||(5771734-5771898)
chr2 (56-172)||(17932860-17932976)
chr2 (52-224)||(29603870-29604053)
chr2 (52-109)||(23696379-23696435)
chr2 (51-109)||(3071467-3071524)
chr2 (52-109)||(23692592-23692648)
chr2 (177-224)||(4876778-4876825)
chr2 (49-99)||(12689429-12689479)
chr2 (52-110)||(30558583-30558640)
chr2 (52-97)||(7395307-7395352)
chr2 (52-97)||(8997891-8997936)
chr2 (52-97)||(9001815-9001860)
[»] scaffold1505 (1 HSPs)
scaffold1505 (50-224)||(512-686)
[»] chr6 (26 HSPs)
chr6 (52-224)||(8667948-8668120)
chr6 (52-224)||(19019382-19019554)
chr6 (51-225)||(8649917-8650091)
chr6 (52-224)||(19011751-19011923)
chr6 (52-224)||(16688414-16688597)
chr6 (58-221)||(16666142-16666316)
chr6 (52-224)||(22467394-22467577)
chr6 (51-109)||(19008729-19008787)
chr6 (52-109)||(13727888-13727944)
chr6 (52-109)||(18929627-18929684)
chr6 (44-109)||(25969977-25970041)
chr6 (44-109)||(25974417-25974481)
chr6 (52-97)||(17997074-17997119)
chr6 (56-224)||(23607107-23607286)
chr6 (56-109)||(19573878-19573930)
chr6 (52-92)||(19577521-19577561)
chr6 (162-225)||(18929501-18929563)
chr6 (51-97)||(4283034-4283080)
chr6 (162-224)||(19008602-19008663)
chr6 (52-97)||(4279752-4279797)
chr6 (52-89)||(20090707-20090744)
chr6 (52-92)||(11225837-11225877)
chr6 (52-100)||(11694580-11694628)
chr6 (177-224)||(20090563-20090610)
chr6 (64-96)||(3121022-3121054)
chr6 (52-111)||(7433233-7433292)
[»] chr8 (25 HSPs)
chr8 (46-218)||(3299954-3300126)
chr8 (52-224)||(3303026-3303198)
chr8 (48-224)||(14673219-14673405)
chr8 (52-224)||(14676431-14676611)
chr8 (52-224)||(36281380-36281562)
chr8 (52-224)||(21834681-21834864)
chr8 (52-157)||(21408228-21408334)
chr8 (52-157)||(21802720-21802826)
chr8 (51-109)||(21935958-21936015)
chr8 (52-109)||(14366000-14366056)
chr8 (52-109)||(21938469-21938525)
chr8 (52-109)||(20135152-20135208)
chr8 (52-92)||(14369580-14369620)
chr8 (52-92)||(14370131-14370171)
chr8 (52-92)||(20132044-20132084)
chr8 (49-100)||(31708761-31708812)
chr8 (52-84)||(36281701-36281733)
chr8 (177-224)||(31708898-31708945)
chr8 (177-224)||(31711118-31711165)
chr8 (52-98)||(5010005-5010051)
chr8 (48-94)||(16907177-16907223)
chr8 (52-97)||(5009903-5009948)
chr8 (52-97)||(25547648-25547693)
chr8 (188-224)||(21408365-21408401)
chr8 (188-224)||(21802857-21802893)
[»] scaffold0074 (1 HSPs)
scaffold0074 (52-224)||(56359-56531)
[»] chr1 (17 HSPs)
chr1 (52-224)||(15142742-15142914)
chr1 (52-224)||(15158168-15158340)
chr1 (52-158)||(20435399-20435504)
chr1 (52-157)||(19749377-19749482)
chr1 (52-157)||(19751603-19751708)
chr1 (52-109)||(18433049-18433105)
chr1 (52-109)||(20514228-20514284)
chr1 (52-108)||(36910689-36910744)
chr1 (52-106)||(24277049-24277102)
chr1 (52-108)||(24281160-24281215)
chr1 (52-157)||(12020393-12020498)
chr1 (50-92)||(20442356-20442398)
chr1 (51-100)||(555660-555709)
chr1 (177-224)||(19749511-19749558)
chr1 (177-224)||(19751737-19751784)
chr1 (52-86)||(15154589-15154623)
chr1 (67-111)||(5505409-5505452)
[»] scaffold0130 (2 HSPs)
scaffold0130 (51-224)||(19070-19253)
scaffold0130 (61-224)||(15071-15244)
[»] chr5 (15 HSPs)
chr5 (51-224)||(38836613-38836796)
chr5 (52-224)||(38840533-38840715)
chr5 (52-157)||(26863838-26863944)
chr5 (52-157)||(26857605-26857711)
chr5 (44-97)||(19049922-19049975)
chr5 (52-108)||(8460026-8460081)
chr5 (50-109)||(40933062-40933120)
chr5 (52-100)||(40936459-40936507)
chr5 (180-224)||(26863772-26863816)
chr5 (52-84)||(38840362-38840394)
chr5 (177-224)||(26857529-26857576)
chr5 (177-224)||(32965767-32965814)
chr5 (51-97)||(35415486-35415532)
chr5 (52-100)||(20817269-20817317)
chr5 (52-100)||(32965633-32965681)
[»] chr3 (35 HSPs)
chr3 (50-224)||(18556522-18556686)
chr3 (52-224)||(26900686-26900848)
chr3 (52-224)||(26907290-26907452)
chr3 (52-157)||(10777026-10777131)
chr3 (52-157)||(8368420-8368526)
chr3 (52-109)||(17593538-17593594)
chr3 (52-109)||(17601546-17601602)
chr3 (52-108)||(94759-94814)
chr3 (52-108)||(103611-103666)
chr3 (52-98)||(8854288-8854334)
chr3 (52-106)||(19767894-19767948)
chr3 (52-100)||(15417673-15417721)
chr3 (52-96)||(38700030-38700074)
chr3 (49-100)||(51199111-51199163)
chr3 (52-98)||(8857126-8857172)
chr3 (52-92)||(16091696-16091736)
chr3 (52-110)||(10497498-10497555)
chr3 (50-92)||(16082518-16082560)
chr3 (177-224)||(94633-94680)
chr3 (52-83)||(8854473-8854504)
chr3 (177-224)||(8857042-8857089)
chr3 (49-108)||(14566475-14566533)
chr3 (52-109)||(10813221-10813278)
chr3 (186-220)||(14429821-14429855)
chr3 (48-97)||(2688846-2688895)
chr3 (50-91)||(10496589-10496630)
chr3 (52-97)||(11134248-11134293)
chr3 (52-97)||(11137482-11137527)
chr3 (52-97)||(19777526-19777571)
chr3 (52-97)||(19789815-19789860)
chr3 (52-97)||(19803377-19803422)
chr3 (49-97)||(19808627-19808675)
chr3 (78-130)||(20098128-20098179)
chr3 (64-128)||(26140794-26140857)
chr3 (52-100)||(26997049-26997097)
[»] scaffold0202 (2 HSPs)
scaffold0202 (52-224)||(13949-14131)
scaffold0202 (52-224)||(10462-10644)
[»] scaffold0123 (1 HSPs)
scaffold0123 (50-109)||(11092-11151)
[»] scaffold0167 (1 HSPs)
scaffold0167 (47-98)||(10680-10731)
[»] chr4 (11 HSPs)
chr4 (52-157)||(10754824-10754930)
chr4 (52-157)||(10757101-10757207)
chr4 (52-157)||(10968593-10968699)
chr4 (52-157)||(10970272-10970378)
chr4 (55-98)||(27788911-27788954)
chr4 (52-100)||(29724941-29724989)
chr4 (177-224)||(10968728-10968775)
chr4 (64-110)||(53993015-53993060)
chr4 (52-97)||(722575-722620)
chr4 (53-90)||(23882218-23882255)
chr4 (52-96)||(726148-726192)
[»] scaffold0320 (2 HSPs)
scaffold0320 (51-109)||(11883-11940)
scaffold0320 (177-224)||(12018-12065)
[»] scaffold0037 (1 HSPs)
scaffold0037 (52-110)||(20755-20812)
[»] scaffold0208 (2 HSPs)
scaffold0208 (52-108)||(1730-1785)
scaffold0208 (177-224)||(1603-1650)
[»] scaffold0071 (1 HSPs)
scaffold0071 (52-100)||(44517-44565)
[»] scaffold0001 (1 HSPs)
scaffold0001 (52-99)||(150975-151022)
[»] scaffold0023 (2 HSPs)
scaffold0023 (52-109)||(146537-146593)
scaffold0023 (52-92)||(149735-149775)
[»] scaffold0179 (3 HSPs)
scaffold0179 (52-100)||(24705-24753)
scaffold0179 (177-224)||(27488-27535)
scaffold0179 (52-100)||(27354-27402)
[»] scaffold0018 (2 HSPs)
scaffold0018 (162-224)||(194576-194637)
scaffold0018 (52-94)||(194455-194497)
[»] scaffold2018 (1 HSPs)
scaffold2018 (52-97)||(932-977)
[»] scaffold0443 (1 HSPs)
scaffold0443 (51-92)||(6522-6563)
[»] scaffold0139 (2 HSPs)
scaffold0139 (52-109)||(3118-3174)
scaffold0139 (177-224)||(2992-3040)
[»] scaffold0878 (3 HSPs)
scaffold0878 (52-94)||(1690-1732)
scaffold0878 (52-94)||(4102-4144)
scaffold0878 (162-224)||(4224-4285)
[»] scaffold0369 (2 HSPs)
scaffold0369 (52-94)||(7411-7453)
scaffold0369 (162-224)||(7533-7594)
[»] scaffold0010 (1 HSPs)
scaffold0010 (52-97)||(245006-245051)
[»] scaffold0045 (1 HSPs)
scaffold0045 (52-92)||(78529-78569)


Alignment Details
Target: chr7 (Bit Score: 257; Significance: 1e-143; HSPs: 22)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 257; E-Value: 1e-143
Query Start/End: Original strand, 235 - 495
Target Start/End: Complemental strand, 39656408 - 39656148
Alignment:
Q  235 atatcatcacctgatttcagcacaagttcttaacttttagtaatttttgtctttttgatttcaattctgtaatttgatacacaacaatttccagtattaa 334  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  39656408 atatcatcacctgatttcagcacaagttcttaacttttagtaatttttgtcttttttatttcaattctgtaatttgatacacaacaatttccagtattaa 39656309  T
Q  335 ttatcttttattaattggatctcagaacatatcacaaaatgcaaatgagtctagtactccatttagtggaaatactcaactctcattagatgatatcaaa 434  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39656308 ttatcttttattaattggatctcagaacatatcacaaaatgcaaatgagtctagtactccatttagtggaaatactcaactctcattagatgatatcaaa 39656209  T
Q  435 cacttgcttctctgaatggaatacatgagtatttcacatatttttgttcagaggtaatgtt 495  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39656208 cacttgcttctctgaatggaatacatgagtatttcacatatttttgttcagaggtaatgtt 39656148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 353 - 433
Target Start/End: Complemental strand, 39671624 - 39671544
Alignment:
Q  353 atctcagaacatatcacaaaatgcaaatgagtctagtactccatttagtggaaatactcaactctcattagatgatatcaa 433  Q
    ||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  39671624 atctcagaacatatctcaaaatgcaaatgagtccagtactccatttaatggaaatactcaactctcattggatgatatcaa 39671544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 264 - 344
Target Start/End: Complemental strand, 39660929 - 39660848
Alignment:
Q  264 ttaacttttagtaatttttgtctttttgatttcaattctgtaatttgatacac-aacaatttccagtattaattatctttta 344  Q
    |||||| |||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||    
T  39660929 ttaactattagtaatttttgtctgtttgatttcaattctgtaatttgatacacaaacaatttccagtattatttatctttta 39660848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 23522553 - 23522447
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||  |||| || ||| |||||||| | ||||||| || ||    
T  23522553 tggaccgtcataatattcctaaggactcaaaagacctccaaaagggcttcttagacccctcaagaaggccttagcacccttaaaaagagcccaagggccc 23522454  T
Q  151 aaggcgc 157  Q
    |||||||    
T  23522453 aaggcgc 23522447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 15942491 - 15942386
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttag-accctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||  |||| | || || || || | ||||||||| |||||||||| ||    
T  15942491 tggaccgtcataatattcctaaggacctaaaa-acctccaaaagggcttcttagtcccctgaaaagggccttagagtccttaaagagagcccaaaggccc 15942393  T
Q  151 aaggcgc 157  Q
    |||||||    
T  15942392 aaggcgc 15942386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 23532784 - 23532678
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| |||||| ||||||  |||| || ||| ||||| || | ||||||| || ||    
T  23532784 tggaccgtcataatattcctaaggacttaaaagacctccaaaagggctgcttagacccctcaagaaggccttagcacccttgaaaagagcccaacggccc 23532685  T
Q  151 aaggcgc 157  Q
    |||||||    
T  23532684 aaggcgc 23532678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 11100006 - 11100051
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  11100006 tggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 11100051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 235 - 351
Target Start/End: Complemental strand, 39651446 - 39651330
Alignment:
Q  235 atatcatcacctgatttcagcacaagttcttaacttttagtaatttttgtct-ttttgatttcaattctgtaatttgatacacaacaatttccagtatta 333  Q
    |||| |||||||||||| ||||||||||  ||||| ||| |||||||||||| |||| |||||| | || |||||||| | ||||||||||||  | |||    
T  39651446 atattatcacctgatttaagcacaagttgctaactgttactaatttttgtctttttttatttcactcctttaatttga-atacaacaatttccgatgtta 39651348  T
Q  334 attatcttttattaattg 351  Q
    ||||| ||||||||||||    
T  39651347 attatattttattaattg 39651330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 43173697 - 43173641
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  43173697 tggaccgtcataatattcttaaggacctgaaagacctccaaaagggctt-ttagaccc 43173641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 11544590 - 11544645
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    ||||||||||||| |||||||||||| |||| |||||||||||||||||||||||||    
T  11544590 tggaccgtcataaaattcctaaggacttaaa-gacctccaaaagggcttcttagacc 11544645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 44356863 - 44356919
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  44356863 tggactgtcataatattcctaaggacctgaaagacctccaaaaggactt-ttagaccc 44356919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 44359984 - 44360024
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  44359984 tggaccgtcataatattcctaaggacctgaaagacctccaa 44360024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 357703 - 357655
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    |||||||||||||||||||||||| |  ||||| |||||||||||||||    
T  357703 tggaccgtcataatattcctaagggctcaaaagccctccaaaagggctt 357655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 362432 - 362384
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    |||||||||||||||||||||||| |  ||||| |||||||||||||||    
T  362432 tggaccgtcataatattcctaagggctcaaaagccctccaaaagggctt 362384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 11527186 - 11527241
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    |||| |||||||| |||||||||||| |||| |||| ||||||||||||||||||||    
T  11527186 tggatcgtcataaaattcctaaggacttaaa-gacccccaaaagggcttcttagacc 11527241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 11527320 - 11527367
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  11527320 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 11527367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 11544725 - 11544772
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  11544725 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 11544772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 15932422 - 15932375
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  15932422 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 15932375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 315 - 346
Target Start/End: Complemental strand, 39660845 - 39660814
Alignment:
Q  315 acaacaatttccagtattaattatcttttatt 346  Q
    ||||||||||||||||||||||||||||||||    
T  39660845 acaacaatttccagtattaattatcttttatt 39660814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 5328518 - 5328473
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  5328518 tggaccgtcataatattcctaagggcttaaaagccctccataaggg 5328473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 5332843 - 5332798
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  5332843 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 5332798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 15828782 - 15828737
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  15828782 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 15828737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 149; Significance: 2e-78; HSPs: 17)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 26120883 - 26120711
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||    
T  26120883 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagccccaaggccca 26120784  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26120783 aggcgcagaagccgcctttctaaacctctagaatcttctagaaaccgcccaaaaggcctaaatacccctatta 26120711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 149; E-Value: 2e-78
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 26126345 - 26126173
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||| |||    
T  26126345 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagccccaaggccca 26126246  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  26126245 aggcgcagaagccgcctttctaaacctctagaatcttctagaaaccgcccaaaaggcctaaatacccctatta 26126173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 45278810 - 45278982
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  45278810 tggaccgtgataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagcccaaaggccca 45278909  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45278910 aggcgcagaggccgcctctctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctatta 45278982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 145; E-Value: 6e-76
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 45286109 - 45286281
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||    
T  45286109 tggaccgtgataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagcccaaaggccca 45286208  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||||| ||||||| |||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  45286209 aggcgcagaggccgcctctctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctatta 45286281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 7311145 - 7310974
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || |||||| || |||| |||||||| | |||    
T  7311145 tggaccgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcc-ttgaagagagcccaaaagccca 7311047  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  7311046 aggcgcagaagccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctatta 7310974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 119; E-Value: 2e-60
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 5771734 - 5771898
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||       ||||| |||    
T  5771734 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaag-------aaaggccca 5771826  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||| ||| |||||||| ||||||||||||||||||||||| |||||||||||||||||    
T  5771827 aggcgcagaagccgccttcctaaacctctag-accttctagaaaccgcccaaaaggcctaaatacccctatta 5771898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 81; E-Value: 9e-38
Query Start/End: Original strand, 56 - 172
Target Start/End: Complemental strand, 17932976 - 17932860
Alignment:
Q  56 ccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtccaaggc 155  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||| |||||||| ||||| || ||||||||| |||| |||||||| | |||||||    
T  17932976 ccgtcataatattcctatggacctaaaagacctccaaaagggcttctttgaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcccaaggc 17932877  T
Q  156 gcagaagccgcctttct 172  Q
    |||||||||||||||||    
T  17932876 gcagaagccgcctttct 17932860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 29604053 - 29603870
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||  |||| || ||||||| | || | |||||||||| ||    
T  29604053 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttatacccctcaagaagggcttagcgcccctgaaaagagcccaaaggccc 29603954  T
Q  151 aaggcgc----------agaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||            ||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  29603953 aaggcgcgtatctcccataaagccgccttaataaacctctagaaccttctagaaaccgcccaaaatacctaaatacccctatta 29603870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 23696379 - 23696435
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  23696379 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 23696435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 3071467 - 3071524
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||    
T  3071467 ttggaccgtcatagtattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 3071524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 23692592 - 23692648
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||| ||||||||| |||||||||||||||||||| ||||||||    
T  23692592 tggaccgtcataatattcttaaggacctgaaagacctccaaaagggctt-ttagaccc 23692648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 4876778 - 4876825
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  4876778 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 4876825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 49 - 99
Target Start/End: Original strand, 12689429 - 12689479
Alignment:
Q  49 tattggaccgtcataatattcctaaggacctaaaagacctccaaaagggct 99  Q
    ||||||||||||||||||||||||  ||||||| ||||| ||| |||||||    
T  12689429 tattggaccgtcataatattcctagagacctaagagacccccagaagggct 12689479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 30558640 - 30558583
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccct 110  Q
    ||||||||||  ||||||||||| ||||| ||||||||||||||| ||| |||||||||    
T  30558640 tggaccgtcaatatattcctaagaacctagaagacctccaaaaggactt-ttagaccct 30558583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 7395352 - 7395307
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  7395352 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 7395307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 8997891 - 8997936
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  8997891 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 8997936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 9001815 - 9001860
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  9001815 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 9001860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1505 (Bit Score: 143; Significance: 9e-75; HSPs: 1)
Name: scaffold1505
Description:

Target: scaffold1505; HSP #1
Raw Score: 143; E-Value: 9e-75
Query Start/End: Original strand, 50 - 224
Target Start/End: Complemental strand, 686 - 512
Alignment:
Q  50 attggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtc 149  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||| |||| |    
T  686 attggaccgtcataatattcctaaggacctaaaggacctccaaaagggcttcttagactctcagaaaggactcagcgcccttgaagaaagccccaaggcc 587  T
Q  150 caaggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||||| |||||||||| ||||||||||||||||||||| |||||||||||||||||    
T  586 caaggcgcagaagccgcctttctaaacctctagaatcttctagaaaccgcccaaaaggcctaaatacccctatta 512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 129; Significance: 2e-66; HSPs: 26)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 8667948 - 8668120
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||| | |||    
T  8667948 tggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagccca 8668047  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  8668048 aggcgcagaagccgcctttctaaacctctagaaccttctagaaaccacccaaaaggcctaaatacccctatta 8668120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 19019554 - 19019382
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||| | |||    
T  19019554 tggactgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagccca 19019455  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19019454 aggcgcagaagccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctatta 19019382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 127; E-Value: 3e-65
Query Start/End: Original strand, 51 - 225
Target Start/End: Original strand, 8649917 - 8650091
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||| |||| ||||| || ||||||||| |||| |||||||| | ||    
T  8649917 ttggaccgtcataatatttctaaggacctaagagacctccaaaagggcttcttagacactcaaaaagggcttagcgcccttgaagagagcccaaaagccc 8650016  T
Q  151 aaggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctattat 225  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  8650017 aaggcgcagaagccgcctttctaaacctctagaaccttctagaaaccgcccaaaaggcctaaatacccctattat 8650091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 19011923 - 19011751
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| ||||  ||||||| | | |    
T  19011923 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagggcccaaaagccaa 19011824  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| ||||||||||||||||||||||  ||||||| ||||||||||||||||||    
T  19011823 aggcgcagaagccgcctttctaaacctctagaaccttctagaaactacccaaaatacctaaatacccctatta 19011751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 76; E-Value: 8e-35
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 16688414 - 16688597
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc-ctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||  ||| ||||  |||| || | | ||||| ||||||||||||||| ||    
T  16688414 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttgaacctctcaagaagggcttaacacccttgaagaaagcccaaaggccc 16688513  T
Q  151 aaggcg---------cag-aagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||         ||| |||||||||| || |||||||| ||||||||||||||||||| ||| ||||||||||||||||||    
T  16688514 aaggcgcgtatttcccagtaagccgccttactggacctctaaaaccttctagaaaccgccctaaatacctaaatacccctatta 16688597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 58 - 221
Target Start/End: Original strand, 16666142 - 16666316
Alignment:
Q  58 gtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc-ctcagaaaggactcagcgcccttaaagaaagcccaaaggtccaaggcg 156  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||| ||||  |||| || | | ||||| ||||||||||||||| ||||| ||    
T  16666142 gtcataatattcctaaggacctaaaagacctccaaaagggcttcttggacctctcaagaagggcttaacacccttgaagaaagcccaaaggcccaagacg 16666241  T
Q  157 ---------cag-aagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaataccccta 221  Q
             ||| |||||||||| || |||||||||||||||||||||||||||| | | |||||||||||||||    
T  16666242 cgtatttcccagaaagccgccttactggacctctagaaccttctagaaaccgccctatatacctaaataccccta 16666316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 22467394 - 22467577
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaag-cccaaaggtc 149  Q
    ||||| |||||||||||| |||||||||||||||||||||||||||||||||||| ||||||  |||| || |||  |||| ||||||| |||||||| |    
T  22467394 tggactgtcataatattcttaaggacctaaaagacctccaaaagggcttcttagatccctcaagaagggcttagc-accttgaagaaagccccaaaggcc 22467492  T
Q  150 caaggcgc---------aga-agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||||         ||| ||||||||| ||| |||||||||||||| |||||||| ||||||| ||||||||||||||||||    
T  22467493 caaggcgcgtatttccgagagagccgccttactaaacctctagaaccttatagaaaccccccaaaatacctaaatacccctatta 22467577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 51 - 109
Target Start/End: Complemental strand, 19008787 - 19008729
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||    
T  19008787 ttggaccgtcataatattcctaaggacctaaaagaccttcaaaagggcttcctagaccc 19008729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 13727944 - 13727888
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  13727944 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 13727888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 18929684 - 18929627
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||||||||| || |||||||||||| |||||||    
T  18929684 tggaccgtcataatattcctaaggacctaaaagatcttcaaaagggcttcctagaccc 18929627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 25969977 - 25970041
Alignment:
Q  44 tataatattggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  25969977 tataaaattggaccgtcataatattcctaaggacctgaaagacctccaaaaaggctt-ttagaccc 25970041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 44 - 109
Target Start/End: Original strand, 25974417 - 25974481
Alignment:
Q  44 tataatattggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||| |||||||||||||||||||||||||||||| |||||||||||||| ||||| ||||||||    
T  25974417 tataaaattggaccgtcataatattcctaaggacctgaaagacctccaaaaaggctt-ttagaccc 25974481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 17997119 - 17997074
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||||||| |||||||||||||||||    
T  17997119 tggaccgtcataatattcctaaggacctgaaagacctccaaaaggg 17997074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 56 - 224
Target Start/End: Complemental strand, 23607286 - 23607107
Alignment:
Q  56 ccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaagg-actcagcgcccttaaagaaagcccaaaggtccaag 153  Q
    ||||||||||||||||||| ||||||||||||| |||||||| ||| |||| |||||| |||||   | ||| |||||||| | |||||||||| |||||    
T  23607286 ccgtcataatattcctaagaacctaaaagaccttcaaaagggtttcctagacccctcaaaaaggctttaagcacccttaaaaagagcccaaaggcccaag 23607187  T
Q  154 gcgcaga----------agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||  |           |||||||| ||| ||||||||||| ||||||||||||||||||| ||  ||||||||||||||    
T  23607186 gcgcgtatttctcatagcgccgccttacta-acctctagaactttctagaaaccgcccaaaatacacaaatacccctatta 23607107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 56 - 109
Target Start/End: Complemental strand, 19573930 - 19573878
Alignment:
Q  56 ccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  19573930 ccgtcataatattcctaaggacctgaaagacctccaaaaggactt-ttagaccc 19573878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 19577561 - 19577521
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  19577561 tggaccgtcataatattcctaaggacctgaaagacctccaa 19577521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 162 - 225
Target Start/End: Complemental strand, 18929563 - 18929501
Alignment:
Q  162 gccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctattat 225  Q
    |||||||| ||| ||||||||||||||||||||||| ||| ||| || ||||||||||||||||    
T  18929563 gccgccttacta-acctctagaaccttctagaaaccacccgaaatacgtaaatacccctattat 18929501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 51 - 97
Target Start/End: Complemental strand, 4283080 - 4283034
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    ||||||||||||||||||||||||||| |||||| |||||| |||||    
T  4283080 ttggaccgtcataatattcctaaggacttaaaagccctccagaaggg 4283034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Complemental strand, 19008663 - 19008602
Alignment:
Q  162 gccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| ||| ||||||||||||||||||||||| ||| ||| || |||||||||||||||    
T  19008663 gccgccttacta-acctctagaaccttctagaaacctcccgaaatacgtaaatacccctatta 19008602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 4279797 - 4279752
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||    
T  4279797 tggaccgtcataatattcctaaggacttaaaagccctccagaaggg 4279752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 89
Target Start/End: Complemental strand, 20090744 - 20090707
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctc 89  Q
    |||||||||||||||||||||||||||| |||||||||    
T  20090744 tggaccgtcataatattcctaaggacctgaaagacctc 20090707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 11225837 - 11225877
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||| | ||||||||||||    
T  11225837 tggaccgtcataatattcctaaggacttgaaagacctccaa 11225877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 11694580 - 11694628
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    |||||||||||||||||||||||| | |||||| |||||| ||||||||    
T  11694580 tggaccgtcataatattcctaagggcttaaaagccctccagaagggctt 11694628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 20090610 - 20090563
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  20090610 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 20090563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 96
Target Start/End: Original strand, 3121022 - 3121054
Alignment:
Q  64 atattcctaaggacctaaaagacctccaaaagg 96  Q
    |||||| ||||||||||||||||||||||||||    
T  3121022 atattcataaggacctaaaagacctccaaaagg 3121054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 111
Target Start/End: Original strand, 7433233 - 7433292
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctcca-aaagggcttcttagaccctc 111  Q
    |||||||||||||||||||||| | | |||||||||||||  |||||||| ||||||||||    
T  7433233 tggaccgtcataatattcctaaaggcttaaaagacctccaggaagggctt-ttagaccctc 7433292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 125; Significance: 5e-64; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 125; E-Value: 5e-64
Query Start/End: Original strand, 46 - 218
Target Start/End: Original strand, 3299954 - 3300126
Alignment:
Q  46 taatattggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaa 145  Q
    ||||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| |||| ||||||||    
T  3299954 taatactggaccgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaa 3300053  T
Q  146 ggtccaaggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaataccc 218  Q
     | ||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||| |||||||||||    
T  3300054 agcccaaggcgcagaagccgcctttctaaacctctagaactttctagaaaccgcccaaaaggcctaaataccc 3300126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 3303026 - 3303198
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||| || ||||||||||||| ||||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||| | |||    
T  3303026 tggaccgtcataatattcatatggacctaaaagacttccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagccca 3303125  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| ||||||||||| |||||||||||| ||||||| |||||||||||||||||    
T  3303126 aggcgcagaagccgcctttctaaacctctagaactttctagaaaccgtccaaaaggcctaaatacccctatta 3303198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 1e-58
Query Start/End: Original strand, 48 - 224
Target Start/End: Original strand, 14673219 - 14673405
Alignment:
Q  48 atattggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaagg 147  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||    
T  14673219 atattggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttggagaaagcccaaagg 14673318  T
Q  148 tccaaggcgc----------agaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
     |||||||||          |  ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  14673319 cccaaggcgcatgtttctcaaatagccgccttactaaacctctagaaccttctagaaaccgcccaaaatacctaaatatccctatta 14673405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 101; E-Value: 1e-49
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 14676431 - 14676611
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||||||||||||||  |||||||||||||||||||||||||||||||||||||  |||||||||||||| |||    
T  14676431 tggaccgtcataatattcctaaggacctaaaagacctccaa--gggcttcttagaccctcagaaaggactcagcgcccttggagaaagcccaaaggccca 14676528  T
Q  152 aggcgc----------agaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||          |  ||||||||| ||| ||||||||||||||||||||||||||||||| ||||||||| ||||||||    
T  14676529 aggcgcatgtttctcaaatagccgccttactaaacctctagaaccttctagaaaccgcccaaaatacctaaatatccctatta 14676611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 36281562 - 36281380
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||| |||||||| ||||||||||||||| |||    
T  36281562 tggaccgtcataatattcctaaggatctaaaagacctccaaaagggcttcttagaccttcagaaaggactcggcgcccttgaagaaagcccaaaggccca 36281463  T
Q  152 aggcgca-ga---------agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||| ||         ||||||||| ||| | ||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  36281462 aggcgcatgattcccagatagccgccttactaaaactctagaaccttctagagatcgcccaaaatacctaaatacccctatta 36281380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 21834681 - 21834864
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| |||||||||| |||||||||| ||    
T  21834681 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacccctcaaaaaggccttagcacccttaaagagagcccaaaggccc 21834780  T
Q  151 aaggcg---------caga-agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||         |||| ||||||||| ||| ||||||||||||||||||||||||||| ||| ||||||||||||||||||    
T  21834781 aaggcgcgtatttcccagagagccgccttactaaacctctagaaccttctagaaaccgccctaaatacctaaatacccctatta 21834864  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 21408228 - 21408334
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| |||||||||| |||  ||||| ||    
T  21408228 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacccctcaaaaaggccttagcacccttaaagagagcttaaaggccc 21408327  T
Q  151 aaggcgc 157  Q
    |||||||    
T  21408328 aaggcgc 21408334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 21802720 - 21802826
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| || ||| |||||||||| |||  ||||| ||    
T  21802720 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacccctcaaaaaggccttagcacccttaaagagagcttaaaggccc 21802819  T
Q  151 aaggcgc 157  Q
    |||||||    
T  21802820 aaggcgc 21802826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 21935958 - 21936015
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  21935958 ttggactgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 21936015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 14366000 - 14366056
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  14366000 tggaccgtcataatattcctaaggacctgaaagacctccaaaaggactt-ttagaccc 14366056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 21938469 - 21938525
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||| ||||||||||||| |||||||||||||||||||| ||||||||    
T  21938469 tggaccgtcataatgttcctaaggacctgaaagacctccaaaagggctt-ttagaccc 21938525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 20135208 - 20135152
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  20135208 tggactgtcataatattcctaaggacctgaaagacctccaaaaggactt-ttagaccc 20135152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 14369580 - 14369620
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  14369580 tggaccgtcataatattcctaaggacctgaaagacctccaa 14369620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 14370131 - 14370171
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  14370131 tggaccgtcataatattcctaaggacctgaaagacctccaa 14370171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Complemental strand, 20132084 - 20132044
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  20132084 tggaccgtcataatattcctaaggacctgaaagacctccaa 20132044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 31708761 - 31708812
Alignment:
Q  49 tattggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    ||||||||||||||||||||||||||||||| || |||||| |||| |||||    
T  31708761 tattggaccgtcataatattcctaaggacctgaaggacctctaaaaaggctt 31708812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Complemental strand, 36281733 - 36281701
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaag 84  Q
    |||||||||||||||||||||||||||||||||    
T  36281733 tggaccgtcataatattcctaaggacctaaaag 36281701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 31708898 - 31708945
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  31708898 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 31708945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 31711118 - 31711165
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  31711118 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 31711165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 5010051 - 5010005
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggc 98  Q
    |||||||||||||||||||||||| | |||||| |||||| ||||||    
T  5010051 tggaccgtcataatattcctaagggcttaaaagccctccagaagggc 5010005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 48 - 94
Target Start/End: Complemental strand, 16907223 - 16907177
Alignment:
Q  48 atattggaccgtcataatattcctaaggacctaaaagacctccaaaa 94  Q
    |||||||||||||||||||||||||||||| | || |||||| ||||    
T  16907223 atattggaccgtcataatattcctaaggacttgaaggacctctaaaa 16907177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 5009948 - 5009903
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  5009948 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 5009903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 25547648 - 25547693
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  25547648 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 25547693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 21408365 - 21408401
Alignment:
Q  188 tctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  21408365 tctagaaaccgccctaaatacctaaatacccctatta 21408401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 188 - 224
Target Start/End: Original strand, 21802857 - 21802893
Alignment:
Q  188 tctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||| ||| ||||||||||||||||||    
T  21802857 tctagaaaccgccctaaatacctaaatacccctatta 21802893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 121; Significance: 1e-61; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 56359 - 56531
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||| | || ||||||||| ||||  ||||||| | |||    
T  56359 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggtttcttagaccctcaaaaacggcttagcgcccttgaagagggcccaaaagccca 56458  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||||||||| |||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  56459 aggcgcagaagcctcctttctaaacctctagaaccttctagaaaccgcccaaaatacctaaatacccctatta 56531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 121; Significance: 1e-61; HSPs: 17)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 121; E-Value: 1e-61
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 15142914 - 15142742
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    ||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||| ||||| || ||||||||| |||| |||||||| | |||    
T  15142914 tggaccgtcataatattcctatggacctaaaagacctccaaaagggattcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagccca 15142815  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||| |||||||||||||||||||||||| ||||||| ||||||||||| |||||    
T  15142814 aggcgcagaagccgcctttctaaacctctagaaccttctagaaaccgtccaaaaggcctaaatacccttatta 15142742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 117; E-Value: 3e-59
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 15158340 - 15158168
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    ||||||||||||||||||||| ||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||| |||| |||||||| | |||    
T  15158340 tggaccgtcataatattcctatggacctaaaagacctccaaaagggcttcttagatcctcaaaaagggcttagcgcccttgaagagagcccaaaagccca 15158241  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||||| ||||| ||||||| |||||||||    
T  15158240 aggcgcagaagtcgcctttctaaacctctagaaccttctagaaaccgccgaaaaggcctaaattcccctatta 15158168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 83; E-Value: 6e-39
Query Start/End: Original strand, 52 - 158
Target Start/End: Complemental strand, 20435504 - 20435399
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||| |||| ||||||||||||||| |||    
T  20435504 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctccttagaccctcaggaaggactcagcg-ccttgaagaaagcccaaaggccca 20435406  T
Q  152 aggcgca 158  Q
    |||||||    
T  20435405 aggcgca 20435399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 19749377 - 19749482
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||  |||| || ||| |||||||||| |||||||||| ||    
T  19749377 tggaccgtcataatattcctaaggacctgaaagacctccaaaa-ggcttcttagacccctcaagaaggccttagcacccttaaagagagcccaaaggccc 19749475  T
Q  151 aaggcgc 157  Q
    |||||||    
T  19749476 aaggcgc 19749482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 19751603 - 19751708
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||  |||| || ||| |||||||||| |||||||||| ||    
T  19751603 tggaccgtcataatattcctaaggacctgaaagacctccaaaa-ggcttcttagacccctcaagaaggccttagcacccttaaagagagcccaaaggccc 19751701  T
Q  151 aaggcgc 157  Q
    |||||||    
T  19751702 aaggcgc 19751708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 18433049 - 18433105
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  18433049 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 18433105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 20514228 - 20514284
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||| ||||||||    
T  20514228 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggactt-ttagaccc 20514284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 36910744 - 36910689
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    ||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  36910744 tggaccgtcataatattcctaag-accttaaagacctccaaaagggcttcttagacc 36910689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 24277102 - 24277049
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga 106  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||||||||    
T  24277102 tggaccgtcataatattcctaagga-cttaaagacctccaaaagggcttcttaga 24277049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 24281215 - 24281160
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    ||||||||||||||||||||||||| || ||||||||||||||||| ||||||||||    
T  24281215 tggaccgtcataatattcctaagga-cttaaagacctccaaaagggtttcttagacc 24281160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 12020498 - 12020393
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc-ctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||| |||||||||||| | || ||||||||||||||||||||||||| ||||  |||| || ||| |||||||| | ||||  |||| ||    
T  12020498 tggaccgtcataaaattcctaaggactttaa-gacctccaaaagggcttcttagacctctcaagaaggccttagcacccttaaaaagagccataaggccc 12020400  T
Q  151 aaggcgc 157  Q
    |||||||    
T  12020399 aaggcgc 12020393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 20442356 - 20442398
Alignment:
Q  50 attggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||||||| ||||||||||||    
T  20442356 attggaccgtcataatattcctaaggacctgaaagacctccaa 20442398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 100
Target Start/End: Complemental strand, 555709 - 555660
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    ||||||||||||||||||||||||| | |||||| |||||| ||||||||    
T  555709 ttggaccgtcataatattcctaagggcttaaaagccctccagaagggctt 555660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 19749511 - 19749558
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  19749511 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 19749558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 19751737 - 19751784
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  19751737 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 19751784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 86
Target Start/End: Complemental strand, 15154623 - 15154589
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagac 86  Q
    ||||||||||||||||||||| |||||||||||||    
T  15154623 tggaccgtcataatattcctatggacctaaaagac 15154589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 67 - 111
Target Start/End: Original strand, 5505409 - 5505452
Alignment:
Q  67 ttcctaaggacctaaaagacctccaaaagggcttcttagaccctc 111  Q
    |||||||| ||||||||||||| ||||||||||| ||||||||||    
T  5505409 ttcctaagcacctaaaagaccttcaaaagggctt-ttagaccctc 5505452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130 (Bit Score: 104; Significance: 2e-51; HSPs: 2)
Name: scaffold0130
Description:

Target: scaffold0130; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 51 - 224
Target Start/End: Complemental strand, 19253 - 19070
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||||||||||||||| ||    
T  19253 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactgagcgcccttgaagaaagcccaaaggccc 19154  T
Q  151 aaggcg---------caga-agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||         |||| ||||||||| ||| ||||||||||||||||||| | || |||||| |||||||||||| |||||    
T  19153 aaggcgtatgattcccagatagccgccttactaaacctctagaaccttctagagatcgtccaaaatacctaaatacccttatta 19070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0130; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 61 - 224
Target Start/End: Complemental strand, 15244 - 15071
Alignment:
Q  61 ataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtccaaggcgca-g 159  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |    
T  15244 ataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaagcccaaaggcccaaggcgcatg 15145  T
Q  160 a---------agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |         ||||||||| ||| ||||||||||||||||||| | || |||||| |||||||||||| |||||    
T  15144 attcccagatagccgccttactaaacctctagaaccttctagagatcgtccaaaatacctaaatacccttatta 15071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 104; Significance: 2e-51; HSPs: 15)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 51 - 224
Target Start/End: Original strand, 38836613 - 38836796
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||| ||    
T  38836613 ttggaccgtcataatattcctaaggatctaaaagacctccaaaagggcttcttagaccttcagaaaggactcagcgcccttgaagaaagcccaaaggccc 38836712  T
Q  151 aaggcgca-ga---------agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| ||         ||||||||| ||| | ||||||||||||||||| | ||||||||| ||||||||||||||||||    
T  38836713 aaggcgcatgattcccagatagccgccttactaaaactctagaaccttctagagatcgcccaaaatacctaaatacccctatta 38836796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 91; E-Value: 9e-44
Query Start/End: Original strand, 52 - 224
Target Start/End: Original strand, 38840533 - 38840715
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| |||    
T  38840533 tggaccgtcataatattcctaaggatctaaaagacctccaaaagggcttcttagaccttcataaaggactcagcgcccttgaagaaagcccaaaggccca 38840632  T
Q  152 aggcgca-ga---------agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||| ||         ||||||||| ||| | ||||||||||||||||| | ||||||||| ||||||||| || |||||    
T  38840633 aggcgcatgattcccagatagccgccttactaaaactctagaaccttctagagatcgcccaaaatacctaaatatccttatta 38840715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 26863944 - 26863838
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc-tcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  |||| || ||| |||||||| | ||||||| || ||    
T  26863944 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggcttcttagacccttcaagaaggccttagcacccttaaaaagagcccaagggccc 26863845  T
Q  151 aaggcgc 157  Q
    |||||||    
T  26863844 aaggcgc 26863838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 26857711 - 26857605
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    ||||||||||||||||||||||||| || |||||||||||||||||||||||||| ||||||  |||| || ||| |||||||| | ||||||| || ||    
T  26857711 tggaccgtcataatattcctaaggaactgaaagacctccaaaagggcttcttagacccctcaagaaggccttagcacccttaaaaagagcccaagggccc 26857612  T
Q  151 aaggcgc 157  Q
    |||||||    
T  26857611 aaggcgc 26857605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 44 - 97
Target Start/End: Complemental strand, 19049975 - 19049922
Alignment:
Q  44 tataatattggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  19049975 tatattattggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 19049922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 108
Target Start/End: Original strand, 8460026 - 8460081
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  8460026 tggaccgtcataatattcctaaggacttaaa-gacctccaaaagggcttcttagacc 8460081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 50 - 109
Target Start/End: Original strand, 40933062 - 40933120
Alignment:
Q  50 attggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||||| |||||||| ||||||||||| ||||||||    
T  40933062 attggaccgtcataatattcctaaggacctgaaagaccttcaaaagggctt-ttagaccc 40933120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 40936459 - 40936507
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    |||||||||||||||||||||||||||| |||||||| |||||||||||    
T  40936459 tggaccgtcataatattcctaaggacctgaaagaccttcaaaagggctt 40936507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 180 - 224
Target Start/End: Complemental strand, 26863816 - 26863772
Alignment:
Q  180 tagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||| |||||||||||||||| ||| ||||||||||||||||||    
T  26863816 tagaatcttctagaaaccgccctaaatacctaaatacccctatta 26863772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 84
Target Start/End: Original strand, 38840362 - 38840394
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaag 84  Q
    |||||||||||||||||||||||||||||||||    
T  38840362 tggaccgtcataatattcctaaggacctaaaag 38840394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 26857576 - 26857529
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| |||||||| |||||||||    
T  26857576 ctctagaatcttctagaaaccgccctaaatacctaaatccccctatta 26857529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 32965767 - 32965814
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  32965767 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 32965814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 51 - 97
Target Start/End: Original strand, 35415486 - 35415532
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    ||||||||||||||||||||||||| | |||||| |||||| |||||    
T  35415486 ttggaccgtcataatattcctaagggcttaaaagccctccagaaggg 35415532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 20817269 - 20817317
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    ||||||||||  |||||||||||||||| ||||| ||||| ||||||||    
T  20817269 tggaccgtcaatatattcctaaggacctgaaagatctccagaagggctt 20817317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 32965633 - 32965681
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    ||||||||||||||||||||||| |||| || |||||| |||| |||||    
T  32965633 tggaccgtcataatattcctaagaacctgaaggacctctaaaatggctt 32965681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 104; Significance: 2e-51; HSPs: 35)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 104; E-Value: 2e-51
Query Start/End: Original strand, 50 - 224
Target Start/End: Original strand, 18556522 - 18556686
Alignment:
Q  50 attggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtc 149  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||| | |    
T  18556522 attggaccgtcataatattcctatggacctaaaagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagcc 18556621  T
Q  150 caaggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||    
T  18556622 caaggcgcagaagccgcctttct----------aaccttctagaaaccgcccaaaaggcctaaatacccctatta 18556686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 98; E-Value: 6e-48
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 26900848 - 26900686
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||| | |||    
T  26900848 tggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagccca 26900749  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    | |||||||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||    
T  26900748 aagcgcagaagccgcctttct----------aaccttctagaaaccgcccaaaaggcctaaatacccctatta 26900686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 94; E-Value: 2e-45
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 26907452 - 26907290
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||| || ||||||||| |||| |||||||| | |||    
T  26907452 tggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccctcaaaaagggcttagcgcccttgaagagagcccaaaagccca 26907353  T
Q  152 aggcgcagaagccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    | | |||||||||||||||||          |||||||||||||||||||||||| |||||||||||||||||    
T  26907352 aagtgcagaagccgcctttct----------aaccttctagaaaccgcccaaaaggcctaaatacccctatta 26907290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 10777131 - 10777026
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc-ctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||| ||||  |||| || | | |||||||||| |||||| ||| ||    
T  10777131 tggaccgtcataatattcctaaggacctaaaa-acctccaaaagggcttcttagacctctcaagaaggccttaacacccttaaagagagcccataggccc 10777033  T
Q  151 aaggcgc 157  Q
    |||||||    
T  10777032 aaggcgc 10777026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 52 - 157
Target Start/End: Complemental strand, 8368526 - 8368420
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga-ccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||| ||||||||||||||||||| |||||||| ||||||||||||||||| ||||||  |||| || ||| |||||||| | ||||||| || ||    
T  8368526 tggaccgttataatattcctaaggacctgaaagaccttcaaaagggcttcttagacccctcaagaaggccttagcacccttaaaaagagcccaagggccc 8368427  T
Q  151 aaggcgc 157  Q
    |||||||    
T  8368426 aaggcgc 8368420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 17593538 - 17593594
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17593538 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 17593594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 46; E-Value: 7e-17
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 17601546 - 17601602
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  17601546 tggaccgtcataatattcctaaggacctgaaagacctccaaaagggctt-ttagaccc 17601602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 94814 - 94759
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  94814 tggaccgtcataatattcctaaggacttaaa-gacctccaaaagggcttcttagacc 94759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 103666 - 103611
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    |||||||||||||||||||||||||| |||| |||||||||||||||||||||||||    
T  103666 tggaccgtcataatattcctaaggacttaaa-gacctccaaaagggcttcttagacc 103611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 8854334 - 8854288
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggc 98  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||    
T  8854334 tggaccgtcataatattcctaaggacctaaaagaccttcaaaagggc 8854288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 52 - 106
Target Start/End: Complemental strand, 19767948 - 19767894
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttaga 106  Q
    ||||||||||||||||| |||||||||| |||||||||||||||||||| |||||    
T  19767948 tggaccgtcataatatttctaaggacctgaaagacctccaaaagggctttttaga 19767894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 15417673 - 15417721
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  15417673 tggaccgtcataatattcctaaggaactgaaagacctccaaaagggctt 15417721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 38700030 - 38700074
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagg 96  Q
    |||||||||||||||||||||||||||| ||||||||||||||||    
T  38700030 tggaccgtcataatattcctaaggacctgaaagacctccaaaagg 38700074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 49 - 100
Target Start/End: Original strand, 51199111 - 51199163
Alignment:
Q  49 tattggaccgtcataatattcctaaggacctaaaagacctcca-aaagggctt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||| |||||||||    
T  51199111 tattggaccgtcataatattcctaaggacctaaaagatctccagaaagggctt 51199163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 52 - 98
Target Start/End: Complemental strand, 8857172 - 8857126
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggc 98  Q
    |||||||||| |||||||||||||||||||||||||| |||||||||    
T  8857172 tggaccgtcacaatattcctaaggacctaaaagaccttcaaaagggc 8857126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 16091696 - 16091736
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||||||||||||||||||| ||||||||||||    
T  16091696 tggaccgtcataatattcctaaggacctgaaagacctccaa 16091736  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 52 - 110
Target Start/End: Original strand, 10497498 - 10497555
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccct 110  Q
    ||||||||||  |||||||| |||||||||||||||||||||| ||||| |||||||||    
T  10497498 tggaccgtcaatatattcctgaggacctaaaagacctccaaaaaggctt-ttagaccct 10497555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 50 - 92
Target Start/End: Original strand, 16082518 - 16082560
Alignment:
Q  50 attggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||| ||||||||||||||||||| ||||||||||||    
T  16082518 attggaccgttataatattcctaaggacctgaaagacctccaa 16082560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 94680 - 94633
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  94680 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 94633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 52 - 83
Target Start/End: Complemental strand, 8854504 - 8854473
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaa 83  Q
    ||||||||||||||||||||||||||||||||    
T  8854504 tggaccgtcataatattcctaaggacctaaaa 8854473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 8857089 - 8857042
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  8857089 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 8857042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 49 - 108
Target Start/End: Complemental strand, 14566533 - 14566475
Alignment:
Q  49 tattggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    ||||||||||||| ||||||||||| || || ||||||||| ||| ||||||||||||||    
T  14566533 tattggaccgtcacaatattcctaaaga-cttaaagacctctaaaggggcttcttagacc 14566475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 10813278 - 10813221
Alignment:
Q  52 tggaccgtcataatattcctaa-ggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||| ||||||||| ||| |||||| |||||||||||||||||||| ||||||||    
T  10813278 tggaccgttataatattcttaaaggacctgaaagacctccaaaagggctt-ttagaccc 10813221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 186 - 220
Target Start/End: Original strand, 14429821 - 14429855
Alignment:
Q  186 cttctagaaaccgcccaaaagacctaaatacccct 220  Q
    |||||||||||||||||||| ||||||||||||||    
T  14429821 cttctagaaaccgcccaaaatacctaaatacccct 14429855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 97
Target Start/End: Original strand, 2688846 - 2688895
Alignment:
Q  48 atattggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||||| | | |||||| |||||| |||||    
T  2688846 atattggaccgtcataatattcctaaaggcttaaaagccctccagaaggg 2688895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 50 - 91
Target Start/End: Original strand, 10496589 - 10496630
Alignment:
Q  50 attggaccgtcataatattcctaaggacctaaaagacctcca 91  Q
    ||||||||||||  |||||||| |||||||||||||||||||    
T  10496589 attggaccgtcaatatattcctgaggacctaaaagacctcca 10496630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 11134293 - 11134248
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  11134293 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 11134248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 11137527 - 11137482
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  11137527 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 11137482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 19777571 - 19777526
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  19777571 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 19777526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 19789815 - 19789860
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  19789815 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 19789860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Complemental strand, 19803422 - 19803377
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  19803422 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 19803377  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 49 - 97
Target Start/End: Complemental strand, 19808675 - 19808627
Alignment:
Q  49 tattggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    ||||||||||||||||||||||||||| | | |||| |||||| |||||    
T  19808675 tattggaccgtcataatattcctaagggcttgaaagccctccagaaggg 19808627  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 78 - 130
Target Start/End: Complemental strand, 20098179 - 20098128
Alignment:
Q  78 ctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgccct 130  Q
    ||||||||||||||||||||||| ||||||||||  |||||||| || |||||    
T  20098179 ctaaaagacctccaaaagggctt-ttagaccctcccaaaggacttagtgccct 20098128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 64 - 128
Target Start/End: Original strand, 26140794 - 26140857
Alignment:
Q  64 atattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcc 128  Q
    |||||||||| ||| ||| |||||||||||||||||| || |||||||  |||||||| ||||||    
T  26140794 atattcctaaagacttaagagacctccaaaagggctt-ttggaccctcctaaaggacttagcgcc 26140857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 26997097 - 26997049
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    ||||||||||  ||||| |||||||||||||||||||| | ||||||||    
T  26997097 tggaccgtcaatatatttctaaggacctaaaagacctctagaagggctt 26997049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202 (Bit Score: 103; Significance: 6e-51; HSPs: 2)
Name: scaffold0202
Description:

Target: scaffold0202; HSP #1
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 14131 - 13949
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||    
T  14131 tggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaatcccaaaggccca 14032  T
Q  152 aggcgca-ga---------agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||| ||         ||||||||| ||| ||||||||||||||||||| | ||||||||| |||||||||||| |||||    
T  14031 aggcgcatgattcccagatagccgccttactaaacctctagaaccttctagagatcgcccaaaatacctaaatacccttatta 13949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0202; HSP #2
Raw Score: 99; E-Value: 2e-48
Query Start/End: Original strand, 52 - 224
Target Start/End: Complemental strand, 10644 - 10462
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttaaagaaagcccaaaggtcca 151  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||| |||    
T  10644 tggaccgtcataatattcctaaggacctaagagacctccaaaagggcttcttagaccctcagaaaggactcagcgcccttgaagaaatcccaaaggccca 10545  T
Q  152 aggcgca-ga---------agccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    ||||||| ||         ||||||||| ||| ||||||||||||||||||| | |||| |||| |||||||||||| |||||    
T  10544 aggcgcatgattcccagatagccgccttactaaacctctagaaccttctagagatcgcctaaaatacctaaatacccttatta 10462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0123 (Bit Score: 52; Significance: 2e-20; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 50 - 109
Target Start/End: Complemental strand, 11151 - 11092
Alignment:
Q  50 attggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||    
T  11151 attggaccgtcataatattcctaaggacctgaaagacctccaaaagggctttttagaccc 11092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0167 (Bit Score: 48; Significance: 4e-18; HSPs: 1)
Name: scaffold0167
Description:

Target: scaffold0167; HSP #1
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 47 - 98
Target Start/End: Complemental strand, 10731 - 10680
Alignment:
Q  47 aatattggaccgtcataatattcctaaggacctaaaagacctccaaaagggc 98  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  10731 aatagtggaccgtcataatattcctaaggacctaaaagacctccaaaagggc 10680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 47; Significance: 2e-17; HSPs: 11)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 10754824 - 10754930
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc-tcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||| |||  |||| || ||| |||||||| | |||||||||| |     
T  10754824 tggaccgttataatattcctaaggacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaaagagcccaaaggccg 10754923  T
Q  151 aaggcgc 157  Q
    |||||||    
T  10754924 aaggcgc 10754930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 10757101 - 10757207
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc-tcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||| ||||||| |||  |||| || ||| |||||||| | |||||||||| |     
T  10757101 tggaccgtcataatattcctaaagacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaaagagcccaaaggccg 10757200  T
Q  151 aaggcgc 157  Q
    |||||||    
T  10757201 aaggcgc 10757207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 10968593 - 10968699
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc-tcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||| |||||||||||||||||||||||||||  |||||||||||| ||||||| |||  |||| || ||| |||||||| | |||||||||| |     
T  10968593 tggaccgttataatattcctaaggacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaaagagcccaaaggccg 10968692  T
Q  151 aaggcgc 157  Q
    |||||||    
T  10968693 aaggcgc 10968699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 52 - 157
Target Start/End: Original strand, 10970272 - 10970378
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc-tcagaaaggactcagcgcccttaaagaaagcccaaaggtcc 150  Q
    |||||||||||||||||||||| |||||||||||||  |||||||||||| ||||||| |||  |||| || ||| |||||||| | |||||||||| |     
T  10970272 tggaccgtcataatattcctaaagacctaaaagaccctcaaaagggcttcctagacccttcaagaaggccttagcacccttaaaaagagcccaaaggccg 10970371  T
Q  151 aaggcgc 157  Q
    |||||||    
T  10970372 aaggcgc 10970378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 55 - 98
Target Start/End: Original strand, 27788911 - 27788954
Alignment:
Q  55 accgtcataatattcctaaggacctaaaagacctccaaaagggc 98  Q
    ||||||||||||||||||||||||| |||| |||||||||||||    
T  27788911 accgtcataatattcctaaggacctgaaaggcctccaaaagggc 27788954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 29724989 - 29724941
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    |||||||||||||||||||||||| | |||||| |||||| ||||||||    
T  29724989 tggaccgtcataatattcctaagggcttaaaagccctccagaagggctt 29724941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 10968728 - 10968775
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  10968728 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 10968775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 64 - 110
Target Start/End: Original strand, 53993015 - 53993060
Alignment:
Q  64 atattcctaaggacctaaaagacctccaaaagggcttcttagaccct 110  Q
    ||||| ||||||||||||||||||||||||| ||||| |||||||||    
T  53993015 atatttctaaggacctaaaagacctccaaaaaggctt-ttagaccct 53993060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 722575 - 722620
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  722575 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 722620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 53 - 90
Target Start/End: Original strand, 23882218 - 23882255
Alignment:
Q  53 ggaccgtcataatattcctaaggacctaaaagacctcc 90  Q
    ||||||||||||||||||||| ||||| ||||||||||    
T  23882218 ggaccgtcataatattcctaaagaccttaaagacctcc 23882255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 96
Target Start/End: Original strand, 726148 - 726192
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagg 96  Q
    |||||||||||||||||||||||| | |||||| |||||| ||||    
T  726148 tggaccgtcataatattcctaagggcttaaaagccctccagaagg 726192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 2)
Name: scaffold0320
Description:

Target: scaffold0320; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 51 - 109
Target Start/End: Original strand, 11883 - 11940
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||||||    
T  11883 ttggaccgtcataatattcctaaggacctgaaagacctcaaaaagggctt-ttagaccc 11940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0320; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 12018 - 12065
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  12018 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 12065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 43; Significance: 0.000000000000004; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 52 - 110
Target Start/End: Complemental strand, 20812 - 20755
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccct 110  Q
    |||||||||||||||||||||||||||| ||||||||||| |||||||| |||||||||    
T  20812 tggaccgtcataatattcctaaggacctgaaagacctccacaagggctt-ttagaccct 20755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 2)
Name: scaffold0208
Description:

Target: scaffold0208; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 108
Target Start/End: Complemental strand, 1785 - 1730
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagacc 108  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||| ||||||    
T  1785 tggaccgtcataatattcctaagga-cttaaagacctccaaaagggcttcctagacc 1730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0208; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 1650 - 1603
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  1650 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 1603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 52 - 100
Target Start/End: Complemental strand, 44565 - 44517
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    ||||||||||||||||||||||||| || ||||||||||||||||||||    
T  44565 tggaccgtcataatattcctaaggaactgaaagacctccaaaagggctt 44517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 52 - 99
Target Start/End: Complemental strand, 151022 - 150975
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggct 99  Q
    |||||||||||||||||||||||||||| || ||||||||||||||||    
T  151022 tggaccgtcataatattcctaaggacctgaaggacctccaaaagggct 150975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 38; Significance: 0.000000000004; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 52 - 109
Target Start/End: Original strand, 146537 - 146593
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    ||||| |||||||||||||||||||||| |||||||||||||||| ||| ||||||||    
T  146537 tggactgtcataatattcctaaggacctgaaagacctccaaaaggactt-ttagaccc 146593  T

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Target: scaffold0023; HSP #2
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 149735 - 149775
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    ||||| |||||||||||||||||||||| ||||||||||||    
T  149735 tggactgtcataatattcctaaggacctgaaagacctccaa 149775  T

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Target: scaffold0179 (Bit Score: 37; Significance: 0.00000000002; HSPs: 3)
Name: scaffold0179
Description:

Target: scaffold0179; HSP #1
Raw Score: 37; E-Value: 0.00000000002
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 24705 - 24753
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    |||||||||||||||||||||||||||| || |||||| ||||||||||    
T  24705 tggaccgtcataatattcctaaggacctgaaggacctctaaaagggctt 24753  T

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Target: scaffold0179; HSP #2
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 177 - 224
Target Start/End: Original strand, 27488 - 27535
Alignment:
Q  177 ctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||||||||||||||| ||| || |||||||||||||||    
T  27488 ctctagaatcttctagaaaccgccctaaatacataaatacccctatta 27535  T

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Target: scaffold0179; HSP #3
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 100
Target Start/End: Original strand, 27354 - 27402
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggctt 100  Q
    |||||||||||||||||||| ||||||| || |||||| ||||| ||||    
T  27354 tggaccgtcataatattcctgaggacctgaaggacctctaaaagagctt 27402  T

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Target: scaffold0018 (Bit Score: 35; Significance: 0.0000000002; HSPs: 2)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 194576 - 194637
Alignment:
Q  162 gccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||| ||||||||| |||||||||||||||| ||| || |||||||||||||||    
T  194576 gccgccttactag-cctctagaatcttctagaaaccgccctaaatacataaatacccctatta 194637  T

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Target: scaffold0018; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 194455 - 194497
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaa 94  Q
    |||||||||||||||||||||||||||| || |||||| ||||    
T  194455 tggaccgtcataatattcctaaggacctgaaggacctctaaaa 194497  T

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Target: scaffold2018 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold2018
Description:

Target: scaffold2018; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 932 - 977
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||||| |||||| |||||| |||||    
T  932 tggaccgtcataatattcctaaggacttaaaagccctccagaaggg 977  T

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Target: scaffold0443 (Bit Score: 34; Significance: 0.000000001; HSPs: 1)
Name: scaffold0443
Description:

Target: scaffold0443; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 51 - 92
Target Start/End: Complemental strand, 6563 - 6522
Alignment:
Q  51 ttggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||| |||||||||||||||||||||| ||||||||||||    
T  6563 ttggacagtcataatattcctaaggacctgaaagacctccaa 6522  T

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Target: scaffold0139 (Bit Score: 34; Significance: 0.000000001; HSPs: 2)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 52 - 109
Target Start/End: Complemental strand, 3174 - 3118
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaagggcttcttagaccc 109  Q
    |||||||||||||||||||||||||||| || ||| | ||||||||||| ||||||||    
T  3174 tggaccgtcataatattcctaaggacctgaaggactttcaaaagggctt-ttagaccc 3118  T

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Target: scaffold0139; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 177 - 224
Target Start/End: Complemental strand, 3040 - 2992
Alignment:
Q  177 ctctagaaccttctagaaaccg-cccaaaagacctaaatacccctatta 224  Q
    |||||||| ||||||||||||| ||||||| || |||||||||||||||    
T  3040 ctctagaatcttctagaaaccgccccaaaatacataaatacccctatta 2992  T

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Target: scaffold0878 (Bit Score: 31; Significance: 0.00000006; HSPs: 3)
Name: scaffold0878
Description:

Target: scaffold0878; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 1690 - 1732
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaa 94  Q
    |||||||||||||||||||||||||||| || |||||| ||||    
T  1690 tggaccgtcataatattcctaaggacctgaaggacctctaaaa 1732  T

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Target: scaffold0878; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 4102 - 4144
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaa 94  Q
    |||||||||||||||||||||||||||| || |||||| ||||    
T  4102 tggaccgtcataatattcctaaggacctgaaggacctctaaaa 4144  T

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Target: scaffold0878; HSP #3
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 4224 - 4285
Alignment:
Q  162 gccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||| ||||||||| |||||||||| ||||| ||| || |||||||||||||||    
T  4224 gccgccttactag-cctctagaatcttctagaaatcgccctaaatacataaatacccctatta 4285  T

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Target: scaffold0369 (Bit Score: 31; Significance: 0.00000006; HSPs: 2)
Name: scaffold0369
Description:

Target: scaffold0369; HSP #1
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 52 - 94
Target Start/End: Original strand, 7411 - 7453
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaa 94  Q
    |||||||||||||||||||||||||||| || |||||| ||||    
T  7411 tggaccgtcataatattcctaaggacctgaaggacctctaaaa 7453  T

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Target: scaffold0369; HSP #2
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 162 - 224
Target Start/End: Original strand, 7533 - 7594
Alignment:
Q  162 gccgcctttctagacctctagaaccttctagaaaccgcccaaaagacctaaatacccctatta 224  Q
    |||||||| |||| ||||||||| |||||||||||||| | ||| || |||||||||||||||    
T  7533 gccgccttactag-cctctagaatcttctagaaaccgcgctaaatacataaatacccctatta 7594  T

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Target: scaffold0010 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 52 - 97
Target Start/End: Original strand, 245006 - 245051
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaaaaggg 97  Q
    |||||||||||||||||||||||| | |||||| |||||| |||||    
T  245006 tggaccgtcataatattcctaagggcttaaaagccctccagaaggg 245051  T

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Target: scaffold0045 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 52 - 92
Target Start/End: Original strand, 78529 - 78569
Alignment:
Q  52 tggaccgtcataatattcctaaggacctaaaagacctccaa 92  Q
    |||||||||||| ||||||||||||||| || |||||||||    
T  78529 tggaccgtcatattattcctaaggacctgaaggacctccaa 78569  T

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