View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20869_low_107 (Length: 246)

Name: NF20869_low_107
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20869_low_107
NF20869_low_107
[»] chr5 (20 HSPs)
chr5 (1-210)||(33112161-33112370)
chr5 (62-196)||(6273128-6273262)
chr5 (60-194)||(32383859-32383993)
chr5 (62-194)||(14351909-14352041)
chr5 (64-184)||(13956932-13957052)
chr5 (60-195)||(35456505-35456640)
chr5 (62-186)||(6459707-6459831)
chr5 (61-162)||(8761097-8761198)
chr5 (61-162)||(35758034-35758135)
chr5 (61-185)||(29823256-29823380)
chr5 (62-209)||(18942249-18942397)
chr5 (62-162)||(36745870-36745970)
chr5 (62-162)||(38040623-38040723)
chr5 (62-162)||(40143904-40144004)
chr5 (56-163)||(14635339-14635446)
chr5 (62-163)||(3752454-3752555)
chr5 (62-163)||(27194774-27194875)
chr5 (62-209)||(17644161-17644309)
chr5 (62-124)||(389695-389757)
chr5 (61-139)||(17421302-17421380)
[»] chr3 (24 HSPs)
chr3 (62-210)||(42907769-42907917)
chr3 (62-209)||(51537144-51537292)
chr3 (61-185)||(53351170-53351294)
chr3 (62-209)||(29727737-29727885)
chr3 (61-201)||(42217125-42217265)
chr3 (61-209)||(15100603-15100752)
chr3 (62-184)||(35054690-35054812)
chr3 (62-162)||(30465089-30465189)
chr3 (62-162)||(55258087-55258187)
chr3 (61-157)||(33634882-33634978)
chr3 (62-162)||(37599876-37599976)
chr3 (62-162)||(39850695-39850795)
chr3 (61-163)||(29025258-29025360)
chr3 (62-162)||(23241865-23241965)
chr3 (60-130)||(10259229-10259299)
chr3 (61-183)||(11018704-11018825)
chr3 (62-162)||(2849268-2849367)
chr3 (63-143)||(11412514-11412594)
chr3 (64-196)||(5123764-5123888)
chr3 (62-130)||(11676266-11676333)
chr3 (60-107)||(44201107-44201154)
chr3 (60-162)||(41462357-41462459)
chr3 (61-162)||(11574993-11575094)
chr3 (62-159)||(27002522-27002619)
[»] chr1 (34 HSPs)
chr1 (61-209)||(33690158-33690306)
chr1 (62-209)||(44410712-44410860)
chr1 (62-209)||(32364121-32364269)
chr1 (62-186)||(45774760-45774880)
chr1 (62-196)||(3252226-3252360)
chr1 (61-183)||(18032286-18032408)
chr1 (62-194)||(3014143-3014274)
chr1 (62-163)||(42866278-42866379)
chr1 (60-162)||(28234797-28234899)
chr1 (62-195)||(962465-962598)
chr1 (61-196)||(24638701-24638833)
chr1 (104-194)||(3794187-3794277)
chr1 (62-196)||(49241642-49241776)
chr1 (61-162)||(44257769-44257870)
chr1 (62-186)||(20725983-20726107)
chr1 (61-163)||(3355399-3355501)
chr1 (61-163)||(37034880-37034982)
chr1 (61-196)||(50323329-50323464)
chr1 (88-163)||(24984170-24984245)
chr1 (103-196)||(46545421-46545514)
chr1 (62-162)||(46535277-46535369)
chr1 (62-175)||(19554184-19554297)
chr1 (62-158)||(45193206-45193302)
chr1 (62-144)||(41983793-41983875)
chr1 (61-130)||(1846930-1846999)
chr1 (62-159)||(20117850-20117947)
chr1 (61-154)||(31986096-31986189)
chr1 (62-130)||(9293642-9293710)
chr1 (62-162)||(16914493-16914593)
chr1 (114-196)||(4225049-4225131)
chr1 (125-175)||(50358956-50359006)
chr1 (145-194)||(45484231-45484280)
chr1 (122-163)||(51727116-51727157)
chr1 (62-158)||(16914594-16914690)
[»] chr4 (22 HSPs)
chr4 (60-209)||(19916387-19916536)
chr4 (61-209)||(4414414-4414563)
chr4 (62-196)||(8132791-8132925)
chr4 (61-163)||(25232673-25232775)
chr4 (62-162)||(54822047-54822147)
chr4 (62-196)||(6354939-6355073)
chr4 (62-163)||(1936509-1936610)
chr4 (62-162)||(23611540-23611640)
chr4 (62-162)||(11792384-11792484)
chr4 (62-162)||(28359678-28359778)
chr4 (62-196)||(12704625-12704759)
chr4 (62-196)||(55675420-55675554)
chr4 (61-193)||(7362120-7362251)
chr4 (62-162)||(44352087-44352187)
chr4 (62-184)||(26203658-26203780)
chr4 (62-185)||(24394073-24394196)
chr4 (60-191)||(24776140-24776271)
chr4 (60-154)||(25510485-25510579)
chr4 (62-196)||(43245685-43245819)
chr4 (97-186)||(13428758-13428847)
chr4 (114-162)||(55497505-55497553)
chr4 (106-159)||(38519331-38519384)
[»] chr7 (28 HSPs)
chr7 (62-196)||(46170641-46170775)
chr7 (62-193)||(31813488-31813619)
chr7 (62-186)||(10992695-10992819)
chr7 (62-186)||(34259253-34259377)
chr7 (61-162)||(29983234-29983335)
chr7 (61-194)||(34191874-34192007)
chr7 (62-162)||(11734245-11734345)
chr7 (61-162)||(1582154-1582255)
chr7 (63-196)||(10198308-10198441)
chr7 (62-163)||(24096722-24096823)
chr7 (61-162)||(36099691-36099792)
chr7 (62-194)||(17833666-17833797)
chr7 (62-162)||(36858133-36858233)
chr7 (62-185)||(45269430-45269553)
chr7 (64-209)||(5418899-5419041)
chr7 (62-163)||(44605934-44606035)
chr7 (61-196)||(16216974-16217109)
chr7 (62-185)||(9822519-9822642)
chr7 (62-185)||(10724444-10724567)
chr7 (117-209)||(33610645-33610738)
chr7 (62-152)||(14801973-14802063)
chr7 (62-152)||(15248965-15249055)
chr7 (125-196)||(25069361-25069432)
chr7 (60-191)||(16198683-16198813)
chr7 (64-159)||(33628265-33628360)
chr7 (61-162)||(47423452-47423545)
chr7 (62-188)||(46004153-46004278)
chr7 (114-183)||(45498883-45498951)
[»] chr2 (29 HSPs)
chr2 (61-196)||(16106684-16106819)
chr2 (62-195)||(6065481-6065614)
chr2 (62-196)||(35305265-35305399)
chr2 (62-196)||(37484403-37484537)
chr2 (61-185)||(32878694-32878818)
chr2 (61-187)||(10810536-10810662)
chr2 (56-185)||(19881933-19882062)
chr2 (62-209)||(21800638-21800786)
chr2 (62-162)||(24128753-24128853)
chr2 (61-159)||(17513019-17513117)
chr2 (62-163)||(3988705-3988806)
chr2 (62-162)||(23293189-23293289)
chr2 (62-162)||(7153437-7153536)
chr2 (62-162)||(39678304-39678404)
chr2 (60-174)||(16457739-16457853)
chr2 (62-163)||(12365535-12365636)
chr2 (60-185)||(23250967-23251092)
chr2 (61-162)||(29523894-29523987)
chr2 (62-162)||(37255988-37256088)
chr2 (61-187)||(24934837-24934963)
chr2 (61-187)||(25683529-25683655)
chr2 (62-139)||(18540658-18540735)
chr2 (114-194)||(26606583-26606663)
chr2 (62-162)||(37314945-37315037)
chr2 (57-163)||(22315193-22315299)
chr2 (62-162)||(27905622-27905722)
chr2 (62-162)||(39061932-39062024)
chr2 (63-162)||(31900414-31900505)
chr2 (62-99)||(29781416-29781453)
[»] chr8 (25 HSPs)
chr8 (61-163)||(36833903-36834005)
chr8 (71-209)||(28761636-28761775)
chr8 (61-182)||(32493168-32493289)
chr8 (61-163)||(42063461-42063563)
chr8 (62-179)||(597234-597350)
chr8 (62-162)||(19726716-19726816)
chr8 (62-162)||(40485556-40485656)
chr8 (62-162)||(41726361-41726461)
chr8 (61-159)||(14910094-14910192)
chr8 (62-162)||(30360455-30360555)
chr8 (61-185)||(8014901-8015025)
chr8 (62-162)||(31008538-31008638)
chr8 (62-196)||(18656601-18656727)
chr8 (63-163)||(44056504-44056604)
chr8 (62-159)||(3655857-3655954)
chr8 (62-162)||(13487153-13487252)
chr8 (62-163)||(4455357-4455450)
chr8 (61-162)||(36658514-36658607)
chr8 (62-152)||(26403637-26403727)
chr8 (62-163)||(20821798-20821899)
chr8 (62-196)||(39375122-39375248)
chr8 (104-186)||(29867770-29867852)
chr8 (62-175)||(11031030-11031143)
chr8 (62-163)||(31893208-31893309)
chr8 (114-162)||(5970006-5970054)
[»] chr6 (11 HSPs)
chr6 (62-196)||(6817290-6817424)
chr6 (61-194)||(23595690-23595823)
chr6 (60-162)||(24068200-24068302)
chr6 (61-162)||(30269592-30269693)
chr6 (61-209)||(29419724-29419864)
chr6 (61-163)||(21289550-21289651)
chr6 (62-196)||(30426318-30426452)
chr6 (61-187)||(35166055-35166181)
chr6 (62-163)||(8464281-8464382)
chr6 (62-159)||(22351258-22351347)
chr6 (64-159)||(31513379-31513474)
[»] scaffold0116 (1 HSPs)
scaffold0116 (61-163)||(7838-7940)
[»] scaffold0231 (1 HSPs)
scaffold0231 (62-159)||(11039-11136)
[»] scaffold0070 (1 HSPs)
scaffold0070 (62-162)||(12721-12821)
[»] scaffold0242 (1 HSPs)
scaffold0242 (62-163)||(17854-17955)
[»] scaffold0036 (1 HSPs)
scaffold0036 (62-163)||(51909-52010)
[»] scaffold0131 (1 HSPs)
scaffold0131 (62-196)||(7842-7976)
[»] scaffold0043 (1 HSPs)
scaffold0043 (62-162)||(64345-64445)


Alignment Details
Target: chr5 (Bit Score: 178; Significance: 4e-96; HSPs: 20)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 178; E-Value: 4e-96
Query Start/End: Original strand, 1 - 210
Target Start/End: Complemental strand, 33112370 - 33112161
Alignment:
Q  1 atttccacaaagtcagacaaaacaaagtgatactaatgttgagagattggggtcatatttgcatagttttaaaactcggttcggtcgtcgactcggcagg 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||    
T  33112370 atttccacaaagtcagacaaaacaaagtgatactaatgttgagagattggggtcatatttgcatagttttaaaactcggctcggtcgtcgattcggcagg 33112271  T
Q  101 ggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggttagatgactctgtt 200  Q
    ||||||| || ||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||    
T  33112270 ggcactgagttattggattaatgatcgaactactgagtcattgattgaactgcatgactgaactggattaaaccgtataactcggttagatgactctgtt 33112171  T
Q  201 taagattaac 210  Q
    || |||||||    
T  33112170 taggattaac 33112161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 6273128 - 6273262
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||||||||||||||||| |||||||||||| |||||| ||||||||| || | |||||| ||||||||    
T  6273128 catagttttaaaactcggctcggtcatcgactcggcaggggcactgggttattgggttaatggtcgaaccactgagtcaatggtcgaaccgtatgactga 6273227  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | || |||||| ||||||||||||||||||||    
T  6273228 accggatcaaaccgaataactcggttagatgactc 6273262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 60 - 194
Target Start/End: Complemental strand, 32383993 - 32383859
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||||| ||||||||  ||||  ||||||||| | |||||||||| |||| |||| ||||||| |||||||||||||||    
T  32383993 tgcatagttttaaaactcggctcggtcatcgactcgatagggatactgggtcactaggttaatgattgaaccactgtgtcattggttgaaccgcatgact 32383894  T
Q  160 gaactgaattaaaccgtataactcggttagatgac 194  Q
    ||| || ||||||||| |||||||||| |||||||    
T  32383893 gaattggattaaaccgaataactcggtaagatgac 32383859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 14352041 - 14351909
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||| ||||||| ||| ||| || ||||||| |||||| |||||||||||  |||||||||||||||||    
T  14352041 catagttttaaaactcggctcggtcatcgactcggtaggggcattggatcagtgagttaatggtcgaaccactgagtcattagttgaaccgcatgactga 14351942  T
Q  162 actgaattaaaccgtataactcggttagatgac 194  Q
    |  | ||||||||| |||||||||||| |||||    
T  14351941 atcggattaaaccggataactcggttatatgac 14351909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 64 - 184
Target Start/End: Original strand, 13956932 - 13957052
Alignment:
Q  64 tagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaac 163  Q
    |||||||||||||||| |||||| |||||||||||  || ||||||||| || ||||||| |||||| ||||||||| || |||||||||||||||||||    
T  13956932 tagttttaaaactcggctcggtcatcgactcggcataggtactgggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactgaac 13957031  T
Q  164 tgaattaaaccgtataactcg 184  Q
     | ||||||||| ||||||||    
T  13957032 cggattaaaccgaataactcg 13957052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 60 - 195
Target Start/End: Original strand, 35456505 - 35456640
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||||| || ||| || ||||| ||||| ||||||| | |||| |||||| ||||||||| || |||||||||||||||    
T  35456505 tgcatagttttaaaactcggctcggtcatcaacttgggaggggtactggttcattggatcaatggtcgaaccactgagtcactggttgaaccgcatgact 35456604  T
Q  160 gaactgaattaaaccgtataactcggttagatgact 195  Q
    |||  | ||||||||| |||||||||||| ||||||    
T  35456605 gaatcggattaaaccggataactcggttaaatgact 35456640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 6459707 - 6459831
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||| | |||||||||||||||||| ||| ||||||||| || ||||||| |||||| |||| |||| || |||||||||||||||||    
T  6459707 catagttttaaaactcagctcggtcgtcgactcggcatgggtactgggtcaatgagttaatggtcgaaccactgggtcactggttgaaccgcatgactga 6459806  T
Q  162 actgaattaaaccgtataactcggt 186  Q
    |  | ||||||||  ||||||||||    
T  6459807 atcggattaaaccagataactcggt 6459831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 8761198 - 8761097
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||| |||| ||||||||| | ||| |||| |||||| |||||||||||| | ||||||||||||||    
T  8761198 gcatagttttaaaactcggatcggtcatcgactcggcgggggtactgggtcaataggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 8761099  T
Q  161 aa 162  Q
    ||    
T  8761098 aa 8761097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 35758034 - 35758135
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||| | || ||||||||| ||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  35758034 gcatagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcagtgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 35758133  T
Q  161 aa 162  Q
    ||    
T  35758134 aa 35758135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 29823256 - 29823380
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    |||||||||||||| |||| |||||| |||||||||| |||| ||||||||| | ||| |||| |||||| | ||| |||||||| ||||||||| ||||    
T  29823256 gcatagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcactaggtcaatggtcgaaccagtgaatcattgatcgaaccgcataactg 29823355  T
Q  161 aactgaattaaaccgtataactcgg 185  Q
    ||| | ||||||||| |||||||||    
T  29823356 aaccggattaaaccggataactcgg 29823380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 18942249 - 18942397
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||| ||||| || |||||| ||||| |||| |||||| ||||  | | || |||||||||||||||||    
T  18942249 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaaccactggatgactggttgaaccgcatgactga 18942348  T
Q  162 actgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    |  | |||||| || ||||||| |||| ||||||| || ||||||||||    
T  18942349 atcggattaaatcggataactcagttaaatgactcggtcttaagattaa 18942397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 36745970 - 36745870
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||| ||||| || | ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  36745970 catagttttaaaactcggctcggtcatcgattcggcgggagtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 36745871  T
Q  162 a 162  Q
    |    
T  36745870 a 36745870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 38040623 - 38040723
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||| ||||| | || ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  38040623 catagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 38040722  T
Q  162 a 162  Q
    |    
T  38040723 a 38040723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 40143904 - 40144004
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| | |  |||| |||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  40143904 catagttttaaaactcggctcggtcatcgactcggcggagaaactgagtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 40144003  T
Q  162 a 162  Q
    |    
T  40144004 a 40144004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 56 - 163
Target Start/End: Original strand, 14635339 - 14635446
Alignment:
Q  56 tatttgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcat 155  Q
    ||||| ||||||||| | | |||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| | |||||||||| | |||||||||    
T  14635339 tatttccatagttttcagaatcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcat 14635438  T
Q  156 gactgaac 163  Q
    ||||||||    
T  14635439 gactgaac 14635446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 3752454 - 3752555
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||| | | |||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||  | |||||||||| | |||||||||||||||    
T  3752454 catagttttcagaatcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaagcagtgagtcattggtcgaaccgcatgactga 3752553  T
Q  162 ac 163  Q
    ||    
T  3752554 ac 3752555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 27194875 - 27194774
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||| | ||||| |||  | |||| |||| ||||||| | ||||| |||||||||    
T  27194875 catagttttaaaactcggctcggtcatcgactcggctggggtactgggttaatgggtcaatagttgaaccactgtgtcattggtcgaaccacatgactga 27194776  T
Q  162 ac 163  Q
    ||    
T  27194775 ac 27194774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 17644309 - 17644161
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||  |||||| |||| |||| ||||| |  |||||| ||||| |||| |||||| ||||  ||| || | ||||| |||||||||    
T  17644309 catagttttaaaactcgactcggtcatcgattcggtaggggtatcgggtcactgggtcaatggtcgaaccactggatcaatggtcgaaccacatgactga 17644210  T
Q  162 actgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    |  | |||||| || |||||||||||| ||||||| || ||||||||||    
T  17644209 atcggattaaatcggataactcggttaaatgactcggtcttaagattaa 17644161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 124
Target Start/End: Complemental strand, 389757 - 389695
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatga 124  Q
    |||||||||||||||||| |||||| |||| |||||||||| ||| ||||| ||||| |||||    
T  389757 catagttttaaaactcggctcggtcatcgattcggcaggggtactaggtcactgggtcaatga 389695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 61 - 139
Target Start/End: Original strand, 17421302 - 17421380
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtc 139  Q
    ||||||||||||||||||| |||||| ||||||||  ||||| | ||| |||||| || | ||||||||| ||||||||    
T  17421302 gcatagttttaaaactcggctcggtcatcgactcgagaggggtattggatcattgagtcattgatcgaaccactgagtc 17421380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 101; Significance: 4e-50; HSPs: 24)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 62 - 210
Target Start/End: Original strand, 42907769 - 42907917
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| ||||| |||||||||||||||||||||||||||| |||||||| |||||| |||||||||||| |||||||||||||||||    
T  42907769 catagttttaaaactcggctcggttgtcgactcggcaggggcactgggtcattaggttaatggtcgaaccactgagtcattggttgaaccgcatgactga 42907868  T
Q  162 actgaattaaaccgtataactcggttagatgactctgtttaagattaac 210  Q
    || | |||||||||||| ||||||||||||||||| | ||| |||||||    
T  42907869 accggattaaaccgtattactcggttagatgactcggcttaggattaac 42907917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 51537292 - 51537144
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||||||||| | ||||||| |||||||||| |||||| |||| |||| || |||||||||||| ||||    
T  51537292 catagttttaaaactcggctcggtcatcgactcggcaggggtattgggtcactgggttaatggtcgaaccactgggtcactggttgaaccgcatgtctga 51537193  T
Q  162 actgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    |  | ||||||||| |||||||||||||||||||| || ||||||||||    
T  51537192 atcggattaaaccggataactcggttagatgactcggtcttaagattaa 51537144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 61 - 185
Target Start/End: Original strand, 53351170 - 53351294
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||| |||||||| | |||| |||||||| ||| ||||||||||||||||    
T  53351170 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattaggttaatggttgaaccactgagtcgttggttgaaccgcatgactg 53351269  T
Q  161 aactgaattaaaccgtataactcgg 185  Q
    ||| | ||||||||| |||||||||    
T  53351270 aaccggattaaaccggataactcgg 53351294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 29727737 - 29727885
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||| |||||||||| | |||||||||||||||||| | |||| ||||||||| |  |||||||||||||||||    
T  29727737 catagttttaaaactcggctcggtcatcgattcggcaggggtattgggtcattgggttaatggttgaaccactgagtcactagttgaaccgcatgactga 29727836  T
Q  162 actgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    |  | ||||||||| ||||||| |||||||||||| || ||||||||||    
T  29727837 atcggattaaaccggataactcagttagatgactcggtcttaagattaa 29727885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 61 - 201
Target Start/End: Complemental strand, 42217265 - 42217125
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||| |  || |||||||||||| ||||||| |||||| ||||||||| || ||||||||||||||||    
T  42217265 gcatagttttaaaactcggctcggtcatcgactcggtaaaggtactgggtcattgagttaatggtcgaaccactgagtcactggttgaaccgcatgactg 42217166  T
Q  161 aactgaattaaaccgtataactcggttagatgactctgttt 201  Q
    ||  | ||||||||| ||||||||| |||||||||| ||||    
T  42217165 aatcggattaaaccgaataactcggctagatgactcggttt 42217125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 15100603 - 15100752
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| ||| || ||||||||  | ||  | |||||||||||||||||| |||||| ||||||||| |||||||||||||||||||    
T  15100603 gcatagttttaaaactcggctcgatcatcgactcgataaggatattgggtcattgggttaatggtcgaaccactgagtcactgattgaaccgcatgactg 15100702  T
Q  161 aactgaattaaaccgtataactcggttagatgactctg-tttaagattaa 209  Q
    ||  | ||||||||| ||||||||| || ||||||| | |||||||||||    
T  15100703 aatcggattaaaccgaataactcggctaaatgactcggttttaagattaa 15100752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 35054812 - 35054690
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||||| ||| ||||||||| || ||||||| |||||| | || |||| || |||||||||||||||||    
T  35054812 catagttttaaaactcggctcggtcatcgactcggcatgggtactgggtcagtgagttaatggtcgaaccattgggtcactggttgaaccgcatgactga 35054713  T
Q  162 actgaattaaaccgtataactcg 184  Q
    || ||||||||||  ||||||||    
T  35054712 accgaattaaaccaaataactcg 35054690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 30465189 - 30465089
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  30465189 catagttttaaaattcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 30465090  T
Q  162 a 162  Q
    |    
T  30465089 a 30465089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 55258187 - 55258087
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||  |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  55258187 catagttttaaaactcggctcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 55258088  T
Q  162 a 162  Q
    |    
T  55258087 a 55258087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 61 - 157
Target Start/End: Original strand, 33634882 - 33634978
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatga 157  Q
    ||||||||||||||||||||||| || |||||||||| |||| ||||||| | ||||| |||| |||||| |||||||||||| | |||||||||||    
T  33634882 gcatagttttaaaactcggttcgatcatcgactcggcgggggtactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatga 33634978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 37599976 - 37599876
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||| ||| |||| ||||||||| ||| | |||| |||||| |||||||||||| | |||||||||||||||    
T  37599976 catagttttaaaactcggctcggtcatcgacttggcgggggtactgggtcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 37599877  T
Q  162 a 162  Q
    |    
T  37599876 a 37599876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 39850695 - 39850795
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||| ||||| ||||| |||| |||||| |||||||||||| | ||||||||||| |||    
T  39850695 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgattga 39850794  T
Q  162 a 162  Q
    |    
T  39850795 a 39850795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 29025258 - 29025360
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||| | |||||| |||||||||| |||| ||||||||| ||||| |||| | |||| | |||||||||| | ||||||||||||||    
T  29025258 gcatagttttaaaactcagctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggttgaaccagtgagtcattggtcgaaccgcatgactg 29025357  T
Q  161 aac 163  Q
    |||    
T  29025358 aac 29025360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 23241965 - 23241865
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||||||||| |||| | ||||||| ||||| |||| |||||| ||||| |||||| | |||||||||||||||    
T  23241965 catagttttaaaattcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 23241866  T
Q  162 a 162  Q
    |    
T  23241865 a 23241865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 60 - 130
Target Start/End: Complemental strand, 10259299 - 10259229
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaac 130  Q
    |||||||||||||||||||| |||||| |||||||||| |||| ||||||||| |||||||||| ||||||    
T  10259299 tgcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggttaatggtcgaac 10259229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 183
Target Start/End: Original strand, 11018704 - 11018825
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||  |||| ||||||||| ||| | ||| ||| ||| | |||||||||| | ||||||||| ||||    
T  11018704 gcatagttttaaaactcggctcggtcatcgactcgg-tggggtactgggtcactggatcaataatcaaaccagtgagtcattggtcgaaccgcataactg 11018802  T
Q  161 aactgaattaaaccgtataactc 183  Q
    ||| | ||||||||| |||||||    
T  11018803 aaccggattaaaccggataactc 11018825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 2849367 - 2849268
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||  |||  ||||||||| |||||||||| |||||  | |||||||||| | |||||||||||||||    
T  2849367 catagttttaaaactcggctcggtcatcgactcggt-gggatactgggtcaatgggttaatggtcgaatcattgagtcattggtcgaaccgcatgactga 2849269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 63 - 143
Target Start/End: Complemental strand, 11412594 - 11412514
Alignment:
Q  63 atagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattg 143  Q
    ||||||||||||||||| |||||| ||||||||||| ||| | ||||||| ||||| | || |||||| ||||||||||||    
T  11412594 atagttttaaaactcggctcggtcatcgactcggcaagggtattgggtcactgggtcattggtcgaaccactgagtcattg 11412514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 196
Target Start/End: Original strand, 5123764 - 5123888
Alignment:
Q  64 tagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaac 163  Q
    ||||||||||||||||||||| | | ||||||||||||| |||| |||| |||||        |||| | |||||||||| ||||||||||||| |||||    
T  5123764 tagttttaaaactcggttcggccattgactcggcaggggtactgagtcactgggt--------gaaccattgagtcattggttgaaccgcatgaatgaac 5123855  T
Q  164 tgaattaaaccgtataactcggttagatgactc 196  Q
    || || ||  || || |||||||||||| ||||    
T  5123856 tggatcaactcggatgactcggttagataactc 5123888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Complemental strand, 11676333 - 11676266
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaac 130  Q
    ||||||||||||||| || |||||| |||||||||| |||| ||||||||| ||||| |||| ||||||    
T  11676333 catagttttaaaacttggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaac 11676266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 60 - 107
Target Start/End: Original strand, 44201107 - 44201154
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactg 107  Q
    |||||||||||||||||||| |||||| ||||||||| || |||||||    
T  44201107 tgcatagttttaaaactcggctcggtcatcgactcggtagaggcactg 44201154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 41462459 - 41462357
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||||| |||||||| ||  || ||||||||| || ||  ||| |||||| |  | |||| |  |||||||||||||||    
T  41462459 tgcatagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccatcgggtcacttgttgaaccgcatgact 41462360  T
Q  160 gaa 162  Q
    |||    
T  41462359 gaa 41462357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 11574993 - 11575094
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||  ||| || |||||||||||  || ||||||||||||  |  ||| |||||| |  | ||||||| ||||||||| ||||||    
T  11574993 gcatagttttaaaactcgactcgatcatcgactcggcataggtactgggtcattgaatcgatggtcgaaccatcgggtcattggttgaaccgcgtgactg 11575092  T
Q  161 aa 162  Q
    ||    
T  11575093 aa 11575094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 27002522 - 27002619
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||| |||| | | ||||||||| ||| |||| |||| ||||| |||| | |||||| ||  |||||||| |||| | ||||||    
T  27002522 catagttttaaaactcggctcggacattgactcggcaagggtactgagtcactgggtcaatggttgaactattggatcattgatcgaactgtatgact 27002619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 89; Significance: 5e-43; HSPs: 34)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 33690158 - 33690306
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||||||| |||||||||||||||||||| |||||| |||||||| ||| ||||||||||||| ||    
T  33690158 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgattg 33690257  T
Q  161 aactgaattaaaccgtataactcggttagatgactctgtttaagattaa 209  Q
    ||  | ||||||||| |||||||||||||||||||| | ||| ||||||    
T  33690258 aatcggattaaaccgaataactcggttagatgactcggcttaggattaa 33690306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 44410712 - 44410860
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||||||||||||| ||||||||||| ||| ||||||||| |||||||||| |||||| ||||||||| || ||||||||||||||| |    
T  44410712 catagttttaaaactcggttcggtcatcgactcggcaagggtactgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactaa 44410811  T
Q  162 actgaattaaaccgtataactcggttagatgactctg-tttaagattaa 209  Q
    |    ||||||||| ||||||||| |||||||||| | |||||||||||    
T  44410812 atcagattaaaccgaataactcggctagatgactcggttttaagattaa 44410860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 62 - 209
Target Start/End: Original strand, 32364121 - 32364269
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||||||| |||||| | ||||||  |||||||||| |||||| |||| |||| || |||||||||||||||||    
T  32364121 catagttttaaaattcggctcggtcatcgactcgacaggggtattgggtcgctgggttaatggtcgaaccactgggtcactggttgaaccgcatgactga 32364220  T
Q  162 actgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    |  | ||||||||| |||||||||||||||||||| || ||||||||||    
T  32364221 atcggattaaaccggataactcggttagatgactcggtcttaagattaa 32364269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 45774760 - 45774880
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||||||| || ||||||||||||| | ||||| ||||||||||||||||||    || |||||||||||||| ||||||||||||    
T  45774760 catagttttaaaactcggttcgatcatcgactcggcaggtgtactggatcattgggttaatgatcg----accgagtcattgattgagccgcatgactga 45774855  T
Q  162 actgaattaaaccgtataactcggt 186  Q
    || | ||||||||| ||||||||||    
T  45774856 accggattaaaccgaataactcggt 45774880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 3252226 - 3252360
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||| || || ||||||||| || ||||||| | |||| ||||||||| || |||||||||||||||||    
T  3252226 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcactggttgaaccgcatgactga 3252325  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | ||||||||| ||||||||| ||| ||||||    
T  3252326 accggattaaaccggataactcggctagttgactc 3252360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 183
Target Start/End: Original strand, 18032286 - 18032408
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||||||||||||||| ||| ||||| ||| || ||||||| |||||| ||||||||| || |||||| |||||||||    
T  18032286 gcatagttttaaaactcggctcggtcgtcgactcggcatgggtactggatcaatgagttaatggtcgaaccactgagtcactggttgaactgcatgactg 18032385  T
Q  161 aactgaattaaaccgtataactc 183  Q
    || || ||||||||| |||||||    
T  18032386 aattggattaaaccggataactc 18032408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 194
Target Start/End: Complemental strand, 3014274 - 3014143
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||  ||| |  ||||||||||||||| ||||||||| ||| |||||| |||||| |||||||||||| ||||||| |||||||||    
T  3014274 catagttttaaaactcgtctcgtta-tcgactcggcaggggtactgggtcactggattaatggtcgaaccactgagtcattggttgaaccacatgactga 3014176  T
Q  162 actgaattaaaccgtataactcggttagatgac 194  Q
    || | ||||||||| |||||||||||| |||||    
T  3014175 accggattaaaccgaataactcggttaaatgac 3014143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 42866278 - 42866379
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  42866278 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 42866377  T
Q  162 ac 163  Q
    ||    
T  42866378 ac 42866379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 162
Target Start/End: Original strand, 28234797 - 28234899
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||||| | |||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||    
T  28234797 tgcatagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgact 28234896  T
Q  160 gaa 162  Q
    |||    
T  28234897 gaa 28234899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 195
Target Start/End: Complemental strand, 962598 - 962465
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||||  || ||| ||||| |  ||||||| |||||| ||||||||| || ||||||| |||||||||    
T  962598 catagttttaaaactcggctcggtcatcgactcggcataggtactaggtcaataagttaatggtcgaaccactgagtcactggttgaaccacatgactga 962499  T
Q  162 actgaattaaaccgtataactcggttagatgact 195  Q
    || | ||||||||| |||||||||| || |||||    
T  962498 accggattaaaccgaataactcggtaagttgact 962465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 196
Target Start/End: Original strand, 24638701 - 24638833
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||| | |||||| ||||||||||| ||| | ||||||| || ||||||| |||||||   | |||| || ||||||||||||||||    
T  24638701 gcatagttttaaaactcagctcggtcatcgactcggcatgggtagtgggtcagtgagttaatggtcgaact---gggtcactggttgaaccgcatgactg 24638797  T
Q  161 aactgaattaaaccgtataactcggttagatgactc 196  Q
    ||||| ||||||||| |||||||||| || ||||||    
T  24638798 aactggattaaaccgaataactcggtaagttgactc 24638833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 104 - 194
Target Start/End: Original strand, 3794187 - 3794277
Alignment:
Q  104 actgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggttagatgac 194  Q
    |||||||||||||||||||| |||||| |||||||||||| |||||||||||||||||||    |||||| | ||||||||||||||||||    
T  3794187 actgggtcattgggttaatggtcgaaccactgagtcattggttgaaccgcatgactgaaccagtttaaactgaataactcggttagatgac 3794277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 49241642 - 49241776
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||| ||| |||||  ||||| |||||||||||||| |||||| || ||||| ||| |||||||||||| ||||    
T  49241642 catagttttaaaattcggctcggtcatcgattcgacagggatactggatcattgggttaatggtcgaaccaccgagtcgttggttgaaccgcatggctga 49241741  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    ||   ||||||||  |||||||||||||| |||||    
T  49241742 acctgattaaaccaaataactcggttagacgactc 49241776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 44257769 - 44257870
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||| |||| ||||||||| || || |||| |||||| || ||||||||| | ||||||||||||||    
T  44257769 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccaccgagtcattggtcgaaccgcatgactg 44257868  T
Q  161 aa 162  Q
    ||    
T  44257869 aa 44257870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 186
Target Start/End: Original strand, 20725983 - 20726107
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||| || ||  ||||||||| || ||||||| |||||| ||||| ||| || |||||| ||||||||||    
T  20725983 catagttttaaaactcggctcggtcatcgactcgacatggatactgggtcaatgagttaatggtcgaaccactgactcactggttgaactgcatgactga 20726082  T
Q  162 actgaattaaaccgtataactcggt 186  Q
    |  | |||||||||||| |||||||    
T  20726083 atcggattaaaccgtatgactcggt 20726107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 3355399 - 3355501
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    |||||||||||||| |||| |||||| |||||||||| |||  ||||||||| ||||| |||| |||||  |||||||||||| | ||||||||||||||    
T  3355399 gcatagttttaaaattcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaatcactgagtcattggtcgaaccgcatgactg 3355498  T
Q  161 aac 163  Q
    |||    
T  3355499 aac 3355501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 37034982 - 37034880
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| ||| || ||||||||||| ||| ||||||| | ||||| |||| |||||| |||| ||||||| | ||||||||||||||    
T  37034982 gcatagttttaaaactcggctcgatcatcgactcggcatgggtactgggttactgggtcaatggtcgaaccactgggtcattggtcgaaccgcatgactg 37034883  T
Q  161 aac 163  Q
    |||    
T  37034882 aac 37034880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 61 - 196
Target Start/End: Original strand, 50323329 - 50323464
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||||||||| |||||||||| | ||  ||||||||| ||||||| || |||||| | |  |||| || | |||||||||||  |    
T  50323329 gcatagttttaaaactcggttcggttgtcgactcggtaaggatactgggtcactgggttattggtcgaaccattaggtcactggtcgaaccgcatgatag 50323428  T
Q  161 aactgaattaaaccgtataactcggttagatgactc 196  Q
    ||| | |||||||||  | |||||||||||||||||    
T  50323429 aaccggattaaaccggttgactcggttagatgactc 50323464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 88 - 163
Target Start/End: Complemental strand, 24984245 - 24984170
Alignment:
Q  88 tcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaac 163  Q
    |||||||||| |||| ||||||||| ||||| |||| |||||||| |||||||||| | |||||||||||||||||    
T  24984245 tcgactcggcgggggtactgggtcaatgggtcaatggtcgaactagtgagtcattggtcgaaccgcatgactgaac 24984170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 103 - 196
Target Start/End: Original strand, 46545421 - 46545514
Alignment:
Q  103 cactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggttagatgactc 196  Q
    |||||||||| || || | || |||||| |||||||||||| ||||||||||||||||||| | |||||| || |||||||||||  |||||||    
T  46545421 cactgggtcaatgagtcattggtcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggttgtatgactc 46545514  T

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Target: chr1; HSP #21
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 46535369 - 46535277
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||||        |||| |||||| |||||||||||| | |||||||||||||||    
T  46535369 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtc--------aatggtcgaaccactgagtcattggtcgaaccgcatgactga 46535278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 175
Target Start/End: Complemental strand, 19554297 - 19554184
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| ||| |  |||||||||   ||  ||||| ||| || || | ||||||||| ||||| |||||| | |||||| ||||||||    
T  19554297 catagttttaaaactcggctcgatgatcgactcggtgaggttactggatcactgagtcattgatcgaaccactgaatcattggtcgaaccgtatgactga 19554198  T
Q  162 actgaattaaaccg 175  Q
    ||||||||||||||    
T  19554197 actgaattaaaccg 19554184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 45193302 - 45193206
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgac 158  Q
    |||||||||||||||||| ||| || ||||||||||| |||  |||||||| ||||| | || |||||| ||||| |||||  | ||||||||||||    
T  45193302 catagttttaaaactcggctcgatcatcgactcggcaagggtgctgggtcactgggtcattggtcgaaccactgaatcattagtcgaaccgcatgac 45193206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 144
Target Start/End: Complemental strand, 41983875 - 41983793
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattga 144  Q
    |||||||||||||||||| |||||| || |||| ||| ||| |||| |||| || ||||||| |||||| | |||||||||||    
T  41983875 catagttttaaaactcggctcggtcatcaactcagcatgggtactgagtcagtgagttaatggtcgaaccattgagtcattga 41983793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 130
Target Start/End: Complemental strand, 1846999 - 1846930
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaac 130  Q
    ||||||||||||||||||| ||| || |||||||||| | || ||||||| | |||||||||| ||||||    
T  1846999 gcatagttttaaaactcggctcgatcatcgactcggcggaggtactgggttaatgggttaatggtcgaac 1846930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 20117947 - 20117850
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||   || |||||| || |||||| ||||  |||| |||||||||| |||| |||||| | ||||| |||| |||||||||||||||    
T  20117947 catagttttaaaaactggctcggtcatcaactcggtagggatactgagtcattgggtcaatggtcgaaccattgagttattggttgaaccgcatgact 20117850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 61 - 154
Target Start/End: Complemental strand, 31986189 - 31986096
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgca 154  Q
    |||||||||||||||||||  ||||||||||||||| | |||  |||||||| ||| | | || | |||| |||| ||||||| ||||||||||    
T  31986189 gcatagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgca 31986096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 130
Target Start/End: Original strand, 9293642 - 9293710
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaac 130  Q
    |||||||||||||||||| ||| || |||||||| | |||| ||||||||| ||||| |||| ||||||    
T  9293642 catagttttaaaactcggctcgatcatcgactcgacgggggtactgggtcaatgggtcaatggtcgaac 9293710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 16914593 - 16914493
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||  | ||||||||  || | || ||||||| |||||  ||| |||||| |||| |||| | ||||||||||||||||||    
T  16914593 catagttttaaaactcggctcgaccatcgactcgatagagacattgggtcactgggtcgatggtcgaaccactgggtcactaattgaaccgcatgactga 16914494  T
Q  162 a 162  Q
    |    
T  16914493 a 16914493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 114 - 196
Target Start/End: Complemental strand, 4225131 - 4225049
Alignment:
Q  114 tgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggttagatgactc 196  Q
    ||||| |||| |||||| |||||||||||| ||||||||||| ||||||| | || ||  || || |||||||||||| ||||    
T  4225131 tgggtcaatggtcgaaccactgagtcattggttgaaccgcataactgaaccggatcaactcggatgactcggttagataactc 4225049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 125 - 175
Target Start/End: Complemental strand, 50359006 - 50358956
Alignment:
Q  125 tcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccg 175  Q
    |||||| ||||| |||||| | |||||||||||||||| ||||||||||||    
T  50359006 tcgaaccactgaatcattggtcgaaccgcatgactgaattgaattaaaccg 50358956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 145 - 194
Target Start/End: Original strand, 45484231 - 45484280
Alignment:
Q  145 ttgaaccgcatgactgaactgaattaaaccgtataactcggttagatgac 194  Q
    ||||||||||||||||||  | ||||||||| ||||||||||||| ||||    
T  45484231 ttgaaccgcatgactgaatcggattaaaccggataactcggttaggtgac 45484280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 122 - 163
Target Start/End: Original strand, 51727116 - 51727157
Alignment:
Q  122 tgatcgaactactgagtcattgattgaaccgcatgactgaac 163  Q
    ||||||||| | |||||||||| |||||||||||||||||||    
T  51727116 tgatcgaaccattgagtcattggttgaaccgcatgactgaac 51727157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 62 - 158
Target Start/End: Complemental strand, 16914690 - 16914594
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgac 158  Q
    |||||||||||||||||  || | | | |||| || || |||| |||||||||||||  ||| || ||| ||||||||| | |||||||||||||||    
T  16914690 catagttttaaaactcgactcagccattgacttggtagaggcattgggtcattgggtcgatggtcaaaccactgagtcactaattgaaccgcatgac 16914594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 82; Significance: 8e-39; HSPs: 22)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 60 - 209
Target Start/End: Complemental strand, 19916536 - 19916387
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||||| ||||| | |||| || ||||||||||||| |||||| |||||| ||||| || ||| |||||||||||||||    
T  19916536 tgcatagttttaaaactcggctcggtcatcgacacagcagaggtactgggtcattggattaatggtcgaaccactgaatcgttggttgaaccgcatgact 19916437  T
Q  160 gaactgaattaaaccgtataactcggttagatgactctgtttaagattaa 209  Q
    |||||||||||||| | |||||||||||||||||||| | ||| ||||||    
T  19916436 gaactgaattaaactgaataactcggttagatgactcggcttaggattaa 19916387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 61 - 209
Target Start/End: Original strand, 4414414 - 4414563
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||| |||| |||||| ||||||||| |  ||||||||||||||||    
T  4414414 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcacttgttgaaccgcatgactg 4414513  T
Q  161 aactgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    ||  | ||||||||| |||||||| ||| ||||||| || ||||||||||    
T  4414514 aatcggattaaaccggataactcgattaaatgactcggtcttaagattaa 4414563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 8132791 - 8132925
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||| || || ||||||||| || ||||||| | |||| |||||||||||| |||||||||||||||||    
T  8132791 catagttttaaaactcggctcggtcatcgactcggtagaggtactgggtcactgagttaatggttgaaccactgagtcattggttgaaccgcatgactga 8132890  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | ||||||||| ||||||||| ||| ||||||    
T  8132891 accggattaaaccggataactcggctagttgactc 8132925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 61 - 163
Target Start/End: Complemental strand, 25232775 - 25232673
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  25232775 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 25232676  T
Q  161 aac 163  Q
    |||    
T  25232675 aac 25232673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 54822047 - 54822147
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||||||| | ||||||||| || || ||||||||||| ||||||||| || |||||||||||||||||    
T  54822047 catagttttaaaactcggctcggtcatcgactcggcaggtgtactgggtcactgagtcaatgatcgaaccactgagtcactggttgaaccgcatgactga 54822146  T
Q  162 a 162  Q
    |    
T  54822147 a 54822147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 6355073 - 6354939
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||  || ||  ||| |||| |||||||||| |||||| | ||||||| |  |||||||||||||||||    
T  6355073 catagttttaaaactcggctcggtcatcgactcgatagaggttctgagtcactgggttaatggtcgaaccattgagtcaatagttgaaccgcatgactga 6354974  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | ||||||||| ||||| ||||||||||||||    
T  6354973 accggattaaaccgaataacccggttagatgactc 6354939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 1936610 - 1936509
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||| ||  |||||| ||||||||||||||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  1936610 catagttttaaaacccgactcggtcatcgactcggcaggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 1936511  T
Q  162 ac 163  Q
    ||    
T  1936510 ac 1936509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 23611640 - 23611540
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||||||||||||| |||||||||| |||  ||||||| | ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  23611640 catagttttaaaactcggttcggtcatcgactcggcggggatactgggttaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 23611541  T
Q  162 a 162  Q
    |    
T  23611540 a 23611540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 11792384 - 11792484
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||  ||||||||| ||||| |||| |||||| ||||| |||||| | |||||||||||||||    
T  11792384 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 11792483  T
Q  162 a 162  Q
    |    
T  11792484 a 11792484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 28359778 - 28359678
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| | |||||||||| || | ||||||| ||||| ||||||||||| | ||  ||||||||||||||||||||||||    
T  28359778 catagttttaaaactcggctcggtcattgactcggcagaggtattgggtcactgggtcaatgatcgaaccattggatcattgattgaaccgcatgactga 28359679  T
Q  162 a 162  Q
    |    
T  28359678 a 28359678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 12704759 - 12704625
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||| |||| ||| ||||||||| |  || |||| |||||| |||||||||||||| ||||||||| |||||    
T  12704759 catagttttaaaactcggctcggtcatcgactaggcatgggtactgggtcactaagtcaatggtcgaaccactgagtcattgatcgaaccgcattactga 12704660  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | || ||  || || |||||||||||| ||||    
T  12704659 accggatcaactcggatgactcggttagataactc 12704625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 55675420 - 55675554
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||| |||||| ||||||||| | ||| |||| |||||  |||||||||||| | |||||||| |||| |    
T  55675420 catagttttaaaactcggctcggtcatcgactcgacaggggtactgggtcaataggtcaatggtcgaatcactgagtcattggtcgaaccgcaagactaa 55675519  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | |||||  || ||  ||||||||||| ||||    
T  55675520 accggattaactcgaatggctcggttagataactc 55675554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 61 - 193
Target Start/End: Original strand, 7362120 - 7362251
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    |||||||||||||||| ||||||||| |||||||| ||  || | ||| ||| ||  |||||| |||||| ||| | |||||| ||||||||||||| ||    
T  7362120 gcatagttttaaaacttggttcggtcatcgactcgacaaaggtattggatcactga-ttaatggtcgaaccactaaatcattggttgaaccgcatgattg 7362218  T
Q  161 aactgaattaaaccgtataactcggttagatga 193  Q
    ||||  ||||||||| |||||||| ||||||||    
T  7362219 aactagattaaaccgaataactcgattagatga 7362251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 44352087 - 44352187
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||||||||||||| |||||||||||  || ||||||||| || ||  ||| |||||| | || |||| || |||||||||||||||||    
T  44352087 catagttttaaaactcggttcggtcatcgactcggcataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactga 44352186  T
Q  162 a 162  Q
    |    
T  44352187 a 44352187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 184
Target Start/End: Complemental strand, 26203780 - 26203658
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| ||| || |||||||| ||| |||||||||||| || ||  ||| |||||| |  ||||||||| |||||| ||||||||||    
T  26203780 catagttttaaaactcggctcgatcatcgactcgacagaggcactgggtcactgagtggatggtcgaaccatcgagtcattggttgaactgcatgactga 26203681  T
Q  162 actgaattaaaccgtataactcg 184  Q
    |  | ||||||||| || |||||    
T  26203680 atcggattaaaccggatgactcg 26203658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 24394073 - 24394196
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||| ||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| | ||||| |||| | ||| | ||| |||||    
T  24394073 cataattttaaaactcggctcggtcatcgactcggcgggggtactgggtcactgggtcaatggtcgaaccagtgagttattggtcgaatcacataactga 24394172  T
Q  162 actgaattaaaccgtataactcgg 185  Q
    ||   |||||| || |||||||||    
T  24394173 accagattaaatcggataactcgg 24394196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 24776271 - 24776140
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||| | ||||||||| || || | ||||||| |||||  ||| |||||| ||||  |||||| |||||| ||||| ||    
T  24776271 tgcatagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgatggtcgaaccactggatcattggttgaactgcatggct 24776172  T
Q  160 gaactgaattaaaccgtataactcggttagat 191  Q
    |||  | || ||| || || ||||||||||||    
T  24776171 gaatcggatcaaatcggatgactcggttagat 24776140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 60 - 154
Target Start/End: Original strand, 25510485 - 25510579
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgca 154  Q
    ||||||||||||||||||||  ||||||||||||||| | |||  |||||||| ||| | | || | |||| |||| ||||||| ||||||||||    
T  25510485 tgcatagttttaaaactcggaccggtcgtcgactcggtaagggtgctgggtcactggttcattggttgaaccactgggtcattggttgaaccgca 25510579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 43245819 - 43245685
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||  ||||   |||||||| |||||| | ||||||| |||||||||| |||||| | ||||| | || ||||||||||| |||||    
T  43245819 catagttttaaaattcgactcggctatcgactcgacaggggtattgggtcactgggttaatggtcgaaccattgagttactggttgaaccgcataactga 43245720  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | || ||| |  |||||||||| | |||||||    
T  43245719 accggatcaaatcaaataactcggtcatatgactc 43245685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 97 - 186
Target Start/End: Complemental strand, 13428847 - 13428758
Alignment:
Q  97 caggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggt 186  Q
    |||||| |||| |||  |||||||||| |||||| ||||||||| | |||||||||||| ||||||| |||| ||| |  ||||||||||    
T  13428847 caggggtactgcgtcgctgggttaatggtcgaaccactgagtcactaattgaaccgcataactgaaccgaatcaaaacaaataactcggt 13428758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 114 - 162
Target Start/End: Original strand, 55497505 - 55497553
Alignment:
Q  114 tgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaa 162  Q
    ||||| |||| |||||| |||||||||||||| ||||||||||||||||    
T  55497505 tgggtcaatggtcgaaccactgagtcattgatcgaaccgcatgactgaa 55497553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 106 - 159
Target Start/End: Original strand, 38519331 - 38519384
Alignment:
Q  106 tgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    ||||||| |||||||||| |||||| | ||||||| || |||||||||||||||    
T  38519331 tgggtcactgggttaatggtcgaaccattgagtcactggttgaaccgcatgact 38519384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 79; Significance: 5e-37; HSPs: 28)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 46170641 - 46170775
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||||||||||||| ||||||||||||||||||||| |||||| ||||||||| || | ||||||||||| |||    
T  46170641 catagttttaaaattcggctcggtcatcgactcggcagggacactgggtcattgggttaatggtcgaaccactgagtcaatggtcgaaccgcatgaatga 46170740  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | || |||||| ||||||||||||||||||||    
T  46170741 accggatcaaaccgaataactcggttagatgactc 46170775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 62 - 193
Target Start/End: Original strand, 31813488 - 31813619
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||  |||||| ||||||||||||||| ||||| ||| |||||||||| |||||| ||||||||| || |||||  |||||| |||    
T  31813488 catagttttaaaactcgactcggtcatcgactcggcaggggtactggttcaatgggttaatggtcgaaccactgagtcagtggttgaattgcatgattga 31813587  T
Q  162 actgaattaaaccgtataactcggttagatga 193  Q
    |  ||||||||||| |||||||||||||||||    
T  31813588 atcgaattaaaccgaataactcggttagatga 31813619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 10992819 - 10992695
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||| ||||||||||||||||| ||||||||| || ||||||| |||||| ||| ||||| || |||||| ||||||||||    
T  10992819 catagttttaaaactcggctcggccgtcgactcggcaggggtactgggtcaatgagttaatggtcgaaccactaagtcactggttgaactgcatgactga 10992720  T
Q  162 actgaattaaaccgtataactcggt 186  Q
    |  | ||||||||| ||||||||||    
T  10992719 atcggattaaaccggataactcggt 10992695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 62 - 186
Target Start/End: Complemental strand, 34259377 - 34259253
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||||||||||||||| ||| | | ||||| || ||||||| |||||| ||||||||| || |||||||||||||||||    
T  34259377 catagttttaaaactcggctcggtcgtcgactcggcatgggtattaggtcaatgagttaatggtcgaaccactgagtcactggttgaaccgcatgactga 34259278  T
Q  162 actgaattaaaccgtataactcggt 186  Q
    |  |||||||| || ||||||||||    
T  34259277 atcgaattaaatcggataactcggt 34259253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 29983234 - 29983335
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    |||||||||||||||||||||||||| |||||||||  |||| ||||||||| ||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  29983234 gcatagttttaaaactcggttcggtcatcgactcggtgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 29983333  T
Q  161 aa 162  Q
    ||    
T  29983334 aa 29983335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 61 - 194
Target Start/End: Complemental strand, 34192007 - 34191874
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||  ||||||| ||||||| ||||| ||| |||||| ||| |||||| |||||||||||| |||||||||||||||     
T  34192007 gcatagttttaaaactcggctcggtgatcgactctgcaggggtactggatcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgacta 34191908  T
Q  161 aactgaattaaaccgtataactcggttagatgac 194  Q
    ||  | ||||||||  ||||||||| ||||||||    
T  34191907 aatcggattaaaccaaataactcggctagatgac 34191874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 11734345 - 11734245
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  11734345 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 11734246  T
Q  162 a 162  Q
    |    
T  11734245 a 11734245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 1582154 - 1582255
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||| ||||| ||||||||||| || || |||| ||||||   |||||||||||||||||||||||||||    
T  1582154 gcatagttttaaaactcggctcggtcatcgactcagcaggtgcactgggtcaatgagtcaatggtcgaaccgttgagtcattgattgaaccgcatgactg 1582253  T
Q  161 aa 162  Q
    ||    
T  1582254 aa 1582255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 63 - 196
Target Start/End: Original strand, 10198308 - 10198441
Alignment:
Q  63 atagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaa 162  Q
    ||||||||||||||||| |||||| ||||||||||||||| | ||| ||| ||||| |||| |||||| |||||||||||| | ||||||||||||||||    
T  10198308 atagttttaaaactcggctcggtcatcgactcggcaggggtattggatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactgaa 10198407  T
Q  163 ctgaattaaaccgtataactcggttagatgactc 196  Q
    | | || ||  || || |||||||||||| ||||    
T  10198408 ccggatcaactcggatgactcggttagataactc 10198441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 24096823 - 24096722
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||||||||||||| |||| |||||||||| ||||||||| ||| | |||| |||||| |||||||||||| | |||||||||| ||||    
T  24096823 catagttttaaaactcggttcggtcatcgattcggcaggggtactgggtcactggatcaatggtcgaaccactgagtcattggtcgaaccgcatgtctga 24096724  T
Q  162 ac 163  Q
    ||    
T  24096723 ac 24096722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 36099792 - 36099691
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| | |||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  36099792 gcatagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 36099693  T
Q  161 aa 162  Q
    ||    
T  36099692 aa 36099691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 194
Target Start/End: Original strand, 17833666 - 17833797
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| ||||| ||||| ||||||||  ||||| ||||| ||||| ||||||||||||||| |||||||| ||| |||| ||||||||||||    
T  17833666 catagttttaaaattcggtacggtcatcgactcgataggggtactgg-tcattaggttaatgatcgaaccactgagtcgttggttgagccgcatgactga 17833764  T
Q  162 actgaattaaaccgtataactcggttagatgac 194  Q
    ||   | ||||||| |||||||||| |||||||    
T  17833765 accagactaaaccggataactcggtaagatgac 17833797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 36858133 - 36858233
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||  ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  36858133 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 36858232  T
Q  162 a 162  Q
    |    
T  36858233 a 36858233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 62 - 185
Target Start/End: Complemental strand, 45269553 - 45269430
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| | || ||||||||| ||||| |||| |||||| | |||||||||| | ||||||||| |||||    
T  45269553 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcactgggtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 45269454  T
Q  162 actgaattaaaccgtataactcgg 185  Q
    |  | ||||||||| |||||||||    
T  45269453 atcggattaaaccggataactcgg 45269430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 64 - 209
Target Start/End: Original strand, 5418899 - 5419041
Alignment:
Q  64 tagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaac 163  Q
    |||||||||||||||| |||||| |||||||||||| || ||||||| | |||||||||| |||||| ||||||||| || |||||||    |||||||     
T  5418899 tagttttaaaactcggctcggtcatcgactcggcagaggtactgggttaatgggttaatggtcgaaccactgagtcactggttgaacc----gactgaat 5418994  T
Q  164 tgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
     | ||||||||| |||||||||||  ||||| |||| ||||||||||    
T  5418995 cggattaaaccgaataactcggttgtatgaccctgtcttaagattaa 5419041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 44606035 - 44605934
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||||||||| |||| ||||||||| ||||| |||| | |||| |||||||||||| | |||||||||||||||    
T  44606035 catagttttaaaattcggctcggtcatcgactcggccggggtactgggtcaatgggtcaatggttgaaccactgagtcattggtcgaaccgcatgactga 44605936  T
Q  162 ac 163  Q
    ||    
T  44605935 ac 44605934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 16217109 - 16216974
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||| ||| ||| | ||||||| ||||| |||| |||||| |||||||||||| | ||||| ||||||||    
T  16217109 gcatagttttaaaactcggctcggtcatcgactcagcatgggtattgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccacatgactg 16217010  T
Q  161 aactgaattaaaccgtataactcggttagatgactc 196  Q
    ||| | || ||  || || |||||||||||| ||||    
T  16217009 aaccggatcaactcggatgactcggttagataactc 16216974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 9822519 - 9822642
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| ||| || |||| ||||| |||| | ||||||| || || |||| |||||| | |||||||||| | ||||||||| |||||    
T  9822519 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 9822618  T
Q  162 actgaattaaaccgtataactcgg 185  Q
    || | ||||||||| |||||||||    
T  9822619 accggattaaaccggataactcgg 9822642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 62 - 185
Target Start/End: Original strand, 10724444 - 10724567
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| ||| || |||| ||||| |||| | ||||||| || || |||| |||||| | |||||||||| | ||||||||| |||||    
T  10724444 catagttttaaaactcggctcgatcatcgattcggcgggggtattgggtcactgagtcaatggtcgaaccagtgagtcattggtcgaaccgcataactga 10724543  T
Q  162 actgaattaaaccgtataactcgg 185  Q
    || | ||||||||| |||||||||    
T  10724544 accggattaaaccggataactcgg 10724567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 117 - 209
Target Start/End: Original strand, 33610645 - 33610738
Alignment:
Q  117 gttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggttagatgactc-tgtttaagattaa 209  Q
    ||||||| |||||| |||||||||||| ||||||||||||||||||    ||||||||  |||||||||||||||||||| | |||||||||||    
T  33610645 gttaatggtcgaaccactgagtcattggttgaaccgcatgactgaatcagattaaaccaaataactcggttagatgactcgtttttaagattaa 33610738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 14802063 - 14801973
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccg 152  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||| ||||| ||||| |||| |||||| | |||||||||| | ||||||    
T  14802063 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaaccg 14801973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 15249055 - 15248965
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccg 152  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||| ||||| ||||| |||| |||||| | |||||||||| | ||||||    
T  15249055 catagttttaaaactcggctcggtcatcgactcggcgggggtactaggtcaatgggtcaatggtcgaaccattgagtcattggtcgaaccg 15248965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 125 - 196
Target Start/End: Original strand, 25069361 - 25069432
Alignment:
Q  125 tcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggttagatgactc 196  Q
    |||||| |||||||||||| ||||||||||||||||||| | |||||| || |||||||||||  |||||||    
T  25069361 tcgaaccactgagtcattggttgaaccgcatgactgaaccgtattaaatcggataactcggttgtatgactc 25069432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 60 - 191
Target Start/End: Complemental strand, 16198813 - 16198683
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||| | ||||||||| || || | ||||||| |||||  ||| |||||| |||| |||| || |||||||||||| ||    
T  16198813 tgcatagttttaaaactcggctcggccatcgactcggtagaggtattgggtcactgggtcgatg-tcgaaccactgggtcactggttgaaccgcatggct 16198715  T
Q  160 gaactgaattaaaccgtataactcggttagat 191  Q
    |||  | || ||| || || ||||||||||||    
T  16198714 gaaacggatcaaatcggatgactcggttagat 16198683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 33628360 - 33628265
Alignment:
Q  64 tagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||| |||| | | ||||||||||||| |||| |||| ||||| |||| | |||| | || ||||||| | |||||||||||||    
T  33628360 tagttttaaaactcggctcggacattgactcggcaggggtactgagtcactgggtcaatggttgaaccattgggtcattggtcgaaccgcatgact 33628265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 47423452 - 47423545
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||  |||| ||||| |||| ||||||||| |||        |||||| |||||||||||| | ||||||||||||||    
T  47423452 gcatagttttaaaactcggctcggttatcgattcggcgggggtactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactg 47423543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 62 - 188
Target Start/End: Complemental strand, 46004278 - 46004153
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| || ||||| ||||||| | |   ||||||||| ||||| | || |  ||| ||||  |||||| |||||| ||||||||||    
T  46004278 catagttttaaaaatcggatcagtcgttgactcgggaagatgactgggtcactgggtcactggttcaaccactggatcattggttgaactgcatgactga 46004179  T
Q  162 actgaattaaaccgtataactcggtta 188  Q
    || | ||||||||| ||||||||||||    
T  46004178 accggattaaaccg-ataactcggtta 46004153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 114 - 183
Target Start/End: Original strand, 45498883 - 45498951
Alignment:
Q  114 tgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactc 183  Q
    ||||| |||| |||||| | |||||||||||| |||||| |||||||||| | ||||||||| |||||||    
T  45498883 tgggtcaatggtcgaaccattgagtcattgatcgaaccgaatgactgaaccg-attaaaccggataactc 45498951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 72; Significance: 7e-33; HSPs: 29)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 61 - 196
Target Start/End: Complemental strand, 16106819 - 16106684
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||| | | | ||||||| |||||||||| |||||| ||||||||| || ||||||||||||||||    
T  16106819 gcatagttttaaaactcggctcggtcatcgactcggcaagagtattgggtcactgggttaatggtcgaaccactgagtcactggttgaaccgcatgactg 16106720  T
Q  161 aactgaattaaaccgtataactcggttagatgactc 196  Q
    ||  | ||||||||  ||||||||||||||||||||    
T  16106719 aatcggattaaaccagataactcggttagatgactc 16106684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 62 - 195
Target Start/End: Complemental strand, 6065614 - 6065481
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||||||| ||||| |||| |||||||||| |||| |||| |||||||||| |||||| |||| ||||||| |||||||||||||||||    
T  6065614 catagttttaaaactcggtccggtcatcgattcggcaggggtactgagtcactgggttaatggtcgaaccactgggtcattggttgaaccgcatgactga 6065515  T
Q  162 actgaattaaaccgtataactcggttagatgact 195  Q
    |    ||||||||| ||||||||||| |||||||    
T  6065514 atcagattaaaccgaataactcggtttgatgact 6065481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 35305399 - 35305265
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  35305399 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcactgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 35305300  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | || ||  || || |||||||||||| ||||    
T  35305299 accggatcaactcggatgactcggttagataactc 35305265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 37484403 - 37484537
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| ||||| |||||||||| | ||  ||||||||||||||||| ||||||||| | ||||||| || | |||||||||||  ||    
T  37484403 catagttttaaaactcggctcggttgtcgactcggtaaggatactgggtcattgggttattgatcgaaccattgagtcactggtcgaaccgcatgatgga 37484502  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    |||| ||||||||| || |||||||||||||||||    
T  37484503 actggattaaaccggatgactcggttagatgactc 37484537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 32878818 - 32878694
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| ||||||||||||||||| |||| ||||||||  ||||| |||| |||||| | |||||||||| | ||||||||| ||||    
T  32878818 gcatagttttaaaactcggctcggtcgtcgactcggcgggggtactgggtccctgggtcaatggtcgaaccaatgagtcattggtcgaaccgcataactg 32878719  T
Q  161 aactgaattaaaccgtataactcgg 185  Q
    ||  ||||||||||| |||||||||    
T  32878718 aatcgaattaaaccggataactcgg 32878694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 10810662 - 10810536
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| ||| || |||||||||||  || ||||||||| ||||||||||||||||| |||| ||||| | ||||||||||||||||    
T  10810662 gcatagttttaaaactcggctcgatcatcgactcggcaacggtactgggtcaatgggttaatgatcgaaccactgggtcatcggttgaaccgcatgactg 10810563  T
Q  161 aactgaattaaaccgtataactcggtt 187  Q
    ||    ||||||||| |||||||||||    
T  10810562 aatcagattaaaccgaataactcggtt 10810536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 56 - 185
Target Start/End: Original strand, 19881933 - 19882062
Alignment:
Q  56 tatttgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcat 155  Q
    ||||| |||||||||||||||||| |||||| | |||||||| |||| ||||||||| | ||| |||| |||||| | |||||||||| | |||||||||    
T  19881933 tatttccatagttttaaaactcggctcggtcattgactcggcgggggtactgggtcacttggtcaatggtcgaaccagtgagtcattggtcgaaccgcat 19882032  T
Q  156 gactgaactgaattaaaccgtataactcgg 185  Q
     ||||||| | ||||||||| |||||||||    
T  19882033 aactgaaccggattaaaccggataactcgg 19882062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 209
Target Start/End: Complemental strand, 21800786 - 21800638
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||| ||||| || |||||| ||||| |||| |||||  |||| |||| || |||||| ||||||||||    
T  21800786 catagttttaaaactcggctcggtcatcgactcggtaggggtaccgggtcactgggtcaatggtcgaatcactgggtcactggttgaactgcatgactga 21800687  T
Q  162 actgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    |  | |||||| || |||||||||||| ||||||| || ||||||||||    
T  21800686 atcggattaaatcggataactcggttaaatgactcggtcttaagattaa 21800638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 24128753 - 24128853
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| ||||| |||||| | |||||||||||||||    
T  24128753 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgaatcattggtcgaaccgcatgactga 24128852  T
Q  162 a 162  Q
    |    
T  24128853 a 24128853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 17513019 - 17513117
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    ||||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||| ||||||||    
T  17513019 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaactgcatgact 17513117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 3988705 - 3988806
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| | ||||||||||||  ||||||||||||||| |||| |||||  | || ||||||| |||||||||||||||||    
T  3988705 catagttttaaaactcggctcggtcattgactcggcagggatactgggtcattgggtcaatggtcgaatcattgggtcattggttgaaccgcatgactga 3988804  T
Q  162 ac 163  Q
    ||    
T  3988805 ac 3988806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 23293289 - 23293189
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| | ||||||||  ||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  23293289 catagttttaaaactcggctcggtcattgactcggcgagggtactgggtcaatgggtgaatggtcgaaccactgagtcattggtcgaaccgcatgactga 23293190  T
Q  162 a 162  Q
    |    
T  23293189 a 23293189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 7153437 - 7153536
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||| | |||| ||||||||| | | |||||| |||||| |||||||||||| | |||||||||||||||    
T  7153437 catagttttaaaactcggctcggtcatcgactcgacgggggtactgggtcaat-gattaatggtcgaaccactgagtcattggtcgaaccgcatgactga 7153535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 39678304 - 39678404
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| ||| ||| ||| |||||||||||| || ||||||||| || || |||| |||||  |||||||||||| | |||||||||||||||    
T  39678304 catagttttaaaattcgattctgtcatcgactcggcagaggtactgggtcaatgagtcaatggtcgaatcactgagtcattggtcgaaccgcatgactga 39678403  T
Q  162 a 162  Q
    |    
T  39678404 a 39678404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 60 - 174
Target Start/End: Complemental strand, 16457853 - 16457739
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||||| |||| |||||| ||| | ||||||| || ||||||| | |||| ||||| ||| || ||||| ||||| |||    
T  16457853 tgcatagttttaaaactcggctcggtcatcgattcggcatgggtattgggtcaatgagttaatggtggaaccactgaatcactggttgaatcgcataact 16457754  T
Q  160 gaactgaattaaacc 174  Q
    |||  ||||||||||    
T  16457753 gaatcgaattaaacc 16457739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 12365636 - 12365535
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||||||  |||||||||| ||||   ||| ||||||||| ||| ||| || |||||| |||| |||| || |||||||||||||||||    
T  12365636 catagttttaaaactcggaccggtcgtcgattcggttagggtactgggtcactggtttattggtcgaaccactgggtcactggttgaaccgcatgactga 12365537  T
Q  162 ac 163  Q
    ||    
T  12365536 ac 12365535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 60 - 185
Target Start/End: Original strand, 23250967 - 23251092
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||| | || ||| |||||||| | |||| ||||||||| ||| | |||| |||||| |  ||||||||| | ||||||||| |||    
T  23250967 tgcatagttttaaaactcagctcagtcatcgactcgacgggggtactgggtcactggatcaatggtcgaaccagcgagtcattggtcgaaccgcataact 23251066  T
Q  160 gaactgaattaaaccgtataactcgg 185  Q
    |||  | ||||||||| |||||||||    
T  23251067 gaatcggattaaaccggataactcgg 23251092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 61 - 162
Target Start/End: Complemental strand, 29523987 - 29523894
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||| |||| ||||||||        |||| |||||| |||||||||||| | ||||||||||||||    
T  29523987 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtc--------aatggtcgaaccactgagtcattggtcgaaccgcatgactg 29523896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 37256088 - 37255988
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||  |||||||||| ||||||||| || |||||||| ||| ||| | |||| |||||| | |||||| ||| ||||||||||||| |||    
T  37256088 catagttttaaaaaccggttcggtcatcgactcggtagaggcactggatcaatggttcaatggtcgaaccattgagtcgttggttgaaccgcatgattga 37255989  T
Q  162 a 162  Q
    |    
T  37255988 a 37255988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 24934837 - 24934963
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||  ||| || |||||||||||    ||||||| || || |||| || | |||| ||||  |||||| ||||||||||| ||||    
T  24934837 gcatagttttaaaactcgaatcgatcatcgactcggcaatatcactgggccactgagttattggttgaaccactggatcattggttgaaccgcataactg 24934936  T
Q  161 aactgaattaaaccgtataactcggtt 187  Q
    ||||| |||||| || |||||||||||    
T  24934937 aactgtattaaatcggataactcggtt 24934963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 187
Target Start/End: Original strand, 25683529 - 25683655
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||  ||| || |||||||||||    ||||||| || || |||| || | |||| ||||  |||||| ||||||||||| ||||    
T  25683529 gcatagttttaaaactcgaatcgatcatcgactcggcaatatcactgggccactgagttattggttgaaccactggatcattggttgaaccgcataactg 25683628  T
Q  161 aactgaattaaaccgtataactcggtt 187  Q
    ||||| |||||| || |||||||||||    
T  25683629 aactgtattaaatcggataactcggtt 25683655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 139
Target Start/End: Original strand, 18540658 - 18540735
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtc 139  Q
    |||||||||||||||||| ||| || ||||||||| ||||| ||||| ||||||||| | || |||||| ||||||||    
T  18540658 catagttttaaaactcggctcgatcatcgactcggaaggggtactggatcattgggtcactggtcgaaccactgagtc 18540735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 114 - 194
Target Start/End: Original strand, 26606583 - 26606663
Alignment:
Q  114 tgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggttagatgac 194  Q
    |||||||| | |||||| ||||||| | || |||||| |||||||||||   |||||||||| ||||||||||||||||||    
T  26606583 tgggttaacggtcgaaccactgagttaatggttgaactgcatgactgaatcaaattaaaccgaataactcggttagatgac 26606663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 37315037 - 37314945
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||| ||||| |||| ||||||||        |||| |||||| |||||||||||| | |||||||||||||||    
T  37315037 catagttttaaaactcggctcggtcatcgattcggcgggggtactgggtc--------aatggtcgaaccactgagtcattggtcgaaccgcatgactga 37314946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 57 - 163
Target Start/End: Complemental strand, 22315299 - 22315193
Alignment:
Q  57 atttgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatg 156  Q
    ||||||||||||||||||||||  |||||| | ||||||||||| | ||| |||||  | || |||| |||||| ||| ||||| || ||||||| ||||    
T  22315299 atttgcatagttttaaaactcgtctcggtcattgactcggcaggtgtactaggtcaccgagtcaatggtcgaaccactcagtcactggttgaaccacatg 22315200  T
Q  157 actgaac 163  Q
    | |||||    
T  22315199 attgaac 22315193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 27905622 - 27905722
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||| ||| | || | ||||||||| || |||| ||||||| |||||  ||| |||||| |||| ||||| | |||||||| ||||||||    
T  27905622 catagttttaaaacacggcttggccatcgactcggtagaggcattgggtcactgggtagatggtcgaaccactgggtcatcggttgaaccgtatgactga 27905721  T
Q  162 a 162  Q
    |    
T  27905722 a 27905722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 39062024 - 39061932
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||||||||| |||| | ||||||| |||        |||||| |||||||||||| | |||||||||||||||    
T  39062024 catagttttaaaattcggctcggtcatcgactcggcgggggtattgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 39061933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 63 - 162
Target Start/End: Original strand, 31900414 - 31900505
Alignment:
Q  63 atagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaa 162  Q
    |||||||||||| |||| |||||| |||| ||||| |||| ||||||||| |||        |||||| |||||||||||| | ||||||||||||||||    
T  31900414 atagttttaaaattcggctcggtcatcgattcggcgggggtactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactgaa 31900505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 99
Target Start/End: Original strand, 29781416 - 29781453
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcag 99  Q
    |||||||||||||||||| |||||| ||||||||||||    
T  29781416 catagttttaaaactcggctcggtcttcgactcggcag 29781453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 3e-32; HSPs: 25)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 36833903 - 36834005
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||||||||| |||| |||||| ||||| |||||||| ||||||||||||||    
T  36833903 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtcattgggtcaatggtcgaaccactgaatcattgatcgaaccgcatgactg 36834002  T
Q  161 aac 163  Q
    |||    
T  36834003 aac 36834005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 71 - 209
Target Start/End: Complemental strand, 28761775 - 28761636
Alignment:
Q  71 aaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaatta 170  Q
    |||| |||| |||||| ||||||||||||||| ||||||| ||||||| |||| |||||| ||||||||| || ||||||||||||||||||  | ||||    
T  28761775 aaaattcggctcggtcatcgactcggcaggggtactgggttattgggtcaatggtcgaaccactgagtcactggttgaaccgcatgactgaatcggatta 28761676  T
Q  171 aaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    ||||| ||||||||||||| |||||| || ||||||||||    
T  28761675 aaccggataactcggttaggtgactcggtcttaagattaa 28761636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 182
Target Start/End: Complemental strand, 32493289 - 32493168
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||| ||| | ||||||| || ||||||| |||||| ||||  |||||| ||||||||||||||||    
T  32493289 gcatagttttaaaactcggctcggtcatcgactcggcatgggtattgggtcagtgagttaatggtcgaaccactggatcattggttgaaccgcatgactg 32493190  T
Q  161 aactgaattaaaccgtataact 182  Q
    ||| ||||||||||| ||||||    
T  32493189 aaccgaattaaaccgaataact 32493168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 42063461 - 42063563
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | ||||||||||||||    
T  42063461 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactg 42063560  T
Q  161 aac 163  Q
    |||    
T  42063561 aac 42063563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 62 - 179
Target Start/End: Original strand, 597234 - 597350
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| || ||| ||||||||| ||||||||||| |||||| ||||||| |||||| |||||||||||| ||||||||| |||||||    
T  597234 catagttttaaaattcggctcagtcatcgactcggtaggggcactggatcattgagttaatggtcgaaccactgagtcattg-ttgaaccgcgtgactga 597332  T
Q  162 actgaattaaaccgtata 179  Q
    || | |||||||||||||    
T  597333 accggattaaaccgtata 597350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 19726816 - 19726716
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  19726816 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 19726717  T
Q  162 a 162  Q
    |    
T  19726716 a 19726716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 40485656 - 40485556
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| | |||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  40485656 catagttttaaaactcggctcggtcattgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 40485557  T
Q  162 a 162  Q
    |    
T  40485556 a 40485556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 41726461 - 41726361
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| | || ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  41726461 catagttttaaaactcggctcggtcatcgactcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 41726362  T
Q  162 a 162  Q
    |    
T  41726361 a 41726361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 61 - 159
Target Start/End: Original strand, 14910094 - 14910192
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    ||||||||||||||||||| |||||| |||||||||| || | ||||| ||| ||||| ||||||||||| |||||||||||| | |||||||||||||    
T  14910094 gcatagttttaaaactcggctcggtcatcgactcggcgggagtactggatcaatgggtcaatgatcgaaccactgagtcattggtcgaaccgcatgact 14910192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 30360455 - 30360555
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||| ||||| | || ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  30360455 catagttttaaaactcggctcggtcatcgattcggcggaggtactgggtcaatgggtcaatggtcgaaccactgagtcattgttcgaaccgcatgactga 30360554  T
Q  162 a 162  Q
    |    
T  30360555 a 30360555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 185
Target Start/End: Complemental strand, 8015025 - 8014901
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| | |||||||| |||| ||| ||||| ||| | |||| |||||| | |||||||||| | ||||||||| ||||    
T  8015025 gcatagttttaaaactcggctcggtcattgactcggcgggggtactaggtcactggatcaatggtcgaaccagtgagtcattggtcgaaccgcataactg 8014926  T
Q  161 aactgaattaaaccgtataactcgg 185  Q
    ||  | ||||||||| |||||||||    
T  8014925 aatcggattaaaccggataactcgg 8014901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 31008638 - 31008538
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| ||||||||||| |||||||||| |||| |||| |||| ||||| |||| |||||| | |||||||||| | ||||||||||| |||    
T  31008638 catagttttaaaattcggttcggtcatcgactcggcgggggtactgagtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgattga 31008539  T
Q  162 a 162  Q
    |    
T  31008538 a 31008538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 18656727 - 18656601
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||||||||| ||||||||        |||| |||||| |||||||||||| | |||||||||||||||    
T  18656727 catagttttaaaactcggctcggtcatcgactcggcaggggtactgggtc--------aatggtcgaaccactgagtcattggtcgaaccgcatgactga 18656636  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | || ||  || || |||||||||||| ||||    
T  18656635 accggatcaactcggatgactcggttagataactc 18656601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 63 - 163
Target Start/End: Complemental strand, 44056604 - 44056504
Alignment:
Q  63 atagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaa 162  Q
    ||||||||||||||| | ||| || ||||||||||||||| ||||  ||| ||||| |||| |||||| |||||||||||| | |||||| |||||||||    
T  44056604 atagttttaaaactcagctcgatcatcgactcggcaggggtactgaatcactgggtcaatggtcgaaccactgagtcattggtcgaaccgtatgactgaa 44056505  T
Q  163 c 163  Q
    |    
T  44056504 c 44056504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 62 - 159
Target Start/End: Original strand, 3655857 - 3655954
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    ||||||||||||| |||| |||||| |||||||||| |||  ||||| ||| ||| | |||| |||||| |||||||||||| | |||||||||||||    
T  3655857 catagttttaaaattcggctcggtcatcgactcggcggggatactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgact 3655954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 62 - 162
Target Start/End: Complemental strand, 13487252 - 13487153
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||| ||||| |||| ||||| ||| ||| | |||| |||||| |||||||||||| | |||||||||||||||    
T  13487252 catagttttaaaattcggctcggtcatcgaatcggc-ggggtactggatcaatggatcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 13487154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 4455450 - 4455357
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||| || |||| | ||||||||||||||| ||||||||| |||        |||||| |||||||||||| | |||||||||||||||    
T  4455450 catagttttaaaacttggctcggccatcgactcggcaggggtactgggtcactgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 4455359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 36658514 - 36658607
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||  |||| ||||||||        |||| |||||| |||||||||||| | ||||||||||||||    
T  36658514 gcatagttttaaaactcggctcggtcatcgactcggtgggggtactgggtc--------aatggtcgaaccactgagtcattggtcgaaccgcatgactg 36658605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 62 - 152
Target Start/End: Complemental strand, 26403727 - 26403637
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccg 152  Q
    |||| ||||||||||||| | |||| ||||||||  ||||| |||| ||||||| ||||||| | |||| ||||||||| || ||||||||    
T  26403727 cataattttaaaactcggcttggtcatcgactcgataggggtactgtgtcattgagttaatggttgaaccactgagtcactggttgaaccg 26403637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 20821899 - 20821798
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||| || | || | ||||||||||| ||  |||| |||| |||||||||| |||||| |||||||||    ||||||||||| |||||    
T  20821899 catagttttaaaacttggcttggccatcgactcggcaaggatactgagtcactgggttaatggtcgaaccactgagtcacctgttgaaccgcataactga 20821800  T
Q  162 ac 163  Q
    ||    
T  20821799 ac 20821798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 39375122 - 39375248
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||  | |||| |||||||| |||||| ||||||||| |||        |||||| |||||||||||| | |||||||||||||||    
T  39375122 catagttttaaaactcgtcttggtcatcgactcgacaggggtactgggtcaatgg--------tcgaaccactgagtcattggtcgaaccgcatgactga 39375213  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | || ||  || || |||||||||||| ||||    
T  39375214 accggatcaactcggatgactcggttagataactc 39375248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 104 - 186
Target Start/End: Original strand, 29867770 - 29867852
Alignment:
Q  104 actgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaactgaattaaaccgtataactcggt 186  Q
    ||||||||||||||| | || | |||| | ||||||| || ||||||||||||||||||| | |||||| || || |||||||    
T  29867770 actgggtcattgggtcattggttgaaccagtgagtcactggttgaaccgcatgactgaaccggattaaatcggatgactcggt 29867852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 175
Target Start/End: Original strand, 11031030 - 11031143
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||||||||  ||||| || ||||||  |||  ||||||||| ||||| |||| ||||||    | ||||||| |||||||||||||  ||    
T  11031030 catagttttaaaactcggaccggtcatcaactcggtggggatactgggtcactgggtcaatggtcgaaccgtcgggtcattggttgaaccgcatgataga 11031129  T
Q  162 actgaattaaaccg 175  Q
    || | |||||||||    
T  11031130 accggattaaaccg 11031143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 31893309 - 31893208
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| ||||   |||||||||||||| | ||  ||||||||| || || |  | || ||| ||||||||| || |||||||||||||||||    
T  31893309 catagttttaaaaatcggactggtcgtcgactcggtaaggttactgggtcaatgagtcatcggtcaaaccactgagtcactggttgaaccgcatgactga 31893210  T
Q  162 ac 163  Q
    ||    
T  31893209 ac 31893208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 162
Target Start/End: Complemental strand, 5970054 - 5970006
Alignment:
Q  114 tgggttaatgatcgaactactgagtcattgattgaaccgcatgactgaa 162  Q
    ||||| |||| |||||| | |||||||||| ||||||||||||||||||    
T  5970054 tgggtcaatggtcgaaccattgagtcattggttgaaccgcatgactgaa 5970006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 67; Significance: 7e-30; HSPs: 11)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 6817290 - 6817424
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| ||||||||| | ||| |||||||||||||||||||| |||||| ||||||||| || ||||||||||| ||| |    
T  6817290 catagttttaaaactcggctcggtcatcgactcggtaagggtactgggtcattgggttaatggtcgaaccactgagtcactggttgaaccgcataactaa 6817389  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    |  | ||||||||| |||| |||| ||||||||||    
T  6817390 atcggattaaaccgaataattcggctagatgactc 6817424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 61 - 194
Target Start/End: Original strand, 23595690 - 23595823
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||  ||||||||||||||| ||||||||| |||||| ||| |||||| |||||||||||| ||||||||||||| |     
T  23595690 gcatagttttaaaactcggctcggtgatcgactcggcaggggtactgggtcactgggttgatggtcgaaccactgagtcattggttgaaccgcatgatta 23595789  T
Q  161 aactgaattaaaccgtataactcggttagatgac 194  Q
    ||  | ||||||||  ||||||||| ||||||||    
T  23595790 aatcggattaaaccaaataactcggctagatgac 23595823  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 60 - 162
Target Start/End: Complemental strand, 24068302 - 24068200
Alignment:
Q  60 tgcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||||| |||||| |||||||||| |||| | ||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||    
T  24068302 tgcatagttttaaaactcggctcggtcatcgactcggcgggggtattgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgact 24068203  T
Q  160 gaa 162  Q
    |||    
T  24068202 gaa 24068200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 61 - 162
Target Start/End: Original strand, 30269592 - 30269693
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||| |||| ||||||||| || ||||||| |||||| |||||||| ||| | ||||||||||||||    
T  30269592 gcatagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagttaatggtcgaaccactgagtcgttggtcgaaccgcatgactg 30269691  T
Q  161 aa 162  Q
    ||    
T  30269692 aa 30269693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 61 - 209
Target Start/End: Complemental strand, 29419864 - 29419724
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| ||||||||||||||| ||||||||        |||| || ||| ||||||||| || ||||||||||||||||    
T  29419864 gcatagttttaaaactcggctcggtcatcgactcggcaggggtactgggtc--------aatggtcaaaccactgagtcactggttgaaccgcatgactg 29419773  T
Q  161 aactgaattaaaccgtataactcggttagatgactctgt-ttaagattaa 209  Q
    ||  | |||||| || ||||||||||||| |||||| || ||||||||||    
T  29419772 aatcggattaaa-cggataactcggttaggtgactcggtcttaagattaa 29419724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 21289550 - 21289651
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    |||||||||| | |||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| | |||||||||| | ||||||||||||||    
T  21289550 gcatagttttcatactcggctcggtcatcgactcggc-ggggtactgggtcaatgggtcaatggtcgaaccagtgagtcattggtcgaaccgcatgactg 21289648  T
Q  161 aac 163  Q
    |||    
T  21289649 aac 21289651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 196
Target Start/End: Original strand, 30426318 - 30426452
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| |||||||||   ||| ||||| ||| |  ||||||| |||||| ||| ||||| || ||||||||||||| |||    
T  30426318 catagttttaaaattcggctcggtcatcgactcggacagggtactggatcaataagttaatggtcgaaccactaagtcactggttgaaccgcatgattga 30426417  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    |    ||||||||  ||||||||| ||||||||||    
T  30426418 atcagattaaaccaaataactcggatagatgactc 30426452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 61 - 187
Target Start/End: Complemental strand, 35166181 - 35166055
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||  ||| || |||||||||||    ||||||| || || |||| || | |||| ||||  |||||| ||||||||||| ||||    
T  35166181 gcatagttttaaaactcgaatcgatcatcgactcggcaatatcactgggccactgagttattggttgaaccactggatcattggttgaaccgcataactg 35166082  T
Q  161 aactgaattaaaccgtataactcggtt 187  Q
    ||||| |||||| || |||||||||||    
T  35166081 aactgtattaaatcggataactcggtt 35166055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 8464281 - 8464382
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| |||| |||||| ||  ||||||||  | ||||||||| || ||||||| |||||| ||| | |||||| | |||||||||||||||    
T  8464281 catagttttaaaattcggctcggtcatcagctcggcagatgtactgggtcactgagttaatggtcgaaccactaaatcattggtcgaaccgcatgactga 8464380  T
Q  162 ac 163  Q
    ||    
T  8464381 ac 8464382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 22351347 - 22351258
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||| |||||| |||||||||| |||  ||||||||        |||| |||||| |||||||||||| | |||||||||||||    
T  22351347 catagttttaaaactcggctcggtcatcgactcggcggggatactgggtc--------aatggtcgaaccactgagtcattggtcgaaccgcatgact 22351258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 159
Target Start/End: Complemental strand, 31513474 - 31513379
Alignment:
Q  64 tagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||| |||| | | ||||||| ||||| |||| |||| ||||| |||| | |||| | || ||||||| | |||||||||||||    
T  31513474 tagttttaaaactcggctcggacattgactcggaaggggtactgagtcaatgggtcaatggttgaaccattgggtcattggtcgaaccgcatgact 31513379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0116 (Bit Score: 63; Significance: 2e-27; HSPs: 1)
Name: scaffold0116
Description:

Target: scaffold0116; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 61 - 163
Target Start/End: Original strand, 7838 - 7940
Alignment:
Q  61 gcatagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactg 160  Q
    ||||||||||||||||||| |||||| |||||||||||  || |||| ||||||||||||||| |||||| |||||||| ||| ||||||||||||||||    
T  7838 gcatagttttaaaactcggctcggtcatcgactcggcaaaggtactgagtcattgggttaatggtcgaaccactgagtcgttggttgaaccgcatgactg 7937  T
Q  161 aac 163  Q
    |||    
T  7938 aac 7940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0231 (Bit Score: 58; Significance: 2e-24; HSPs: 1)
Name: scaffold0231
Description:

Target: scaffold0231; HSP #1
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 62 - 159
Target Start/End: Complemental strand, 11136 - 11039
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgact 159  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||    
T  11136 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgact 11039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0070 (Bit Score: 57; Significance: 6e-24; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 12721 - 12821
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||  |||||| |||||||||| |||| ||||||||| ||||| |||| |||||| |||||||||||| | |||||||||||||||    
T  12721 catagttttaaaactcgactcggtcatcgactcggcgggggtactgggtcaatgggtcaatggtcgaaccactgagtcattggtcgaaccgcatgactga 12820  T
Q  162 a 162  Q
    |    
T  12821 a 12821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 163
Target Start/End: Complemental strand, 17955 - 17854
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||| | |||  | |  |||||||||||| |||| ||||||||||||||| |||||| | |||||||||| |||||||||||||||||    
T  17955 catagttttaaaactcagctcgaccattcactcggcaggggtactgagtcattgggttaatggtcgaaccattgagtcattggttgaaccgcatgactga 17856  T
Q  162 ac 163  Q
    ||    
T  17855 ac 17854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0036 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 62 - 163
Target Start/End: Original strand, 51909 - 52010
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||||| |||| ||||||||| || || |||| |||||| || ||||||||| |  ||||||||||||||    
T  51909 catagttttaaaactcggctcggtcatcgactcggcgggggtactgggtcaatgagtcaatggtcgaaccacagagtcattggtcaaaccgcatgactga 52008  T
Q  162 ac 163  Q
    ||    
T  52009 ac 52010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0131 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0131
Description:

Target: scaffold0131; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 62 - 196
Target Start/End: Complemental strand, 7976 - 7842
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    ||||||||||||| ||||  ||||| |||||||||      |||||||||| || || | || |||||| |||||||||||| ||||| |||||||||||    
T  7976 catagttttaaaaatcggaccggtcatcgactcggtcatatcactgggtcaatgagtcattggtcgaaccactgagtcattggttgaatcgcatgactga 7877  T
Q  162 actgaattaaaccgtataactcggttagatgactc 196  Q
    || | |||||| || |||||||||||  |||||||    
T  7876 accgtattaaatcggataactcggttgtatgactc 7842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0043 (Bit Score: 37; Significance: 0.000000000006; HSPs: 1)
Name: scaffold0043
Description:

Target: scaffold0043; HSP #1
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 62 - 162
Target Start/End: Original strand, 64345 - 64445
Alignment:
Q  62 catagttttaaaactcggttcggtcgtcgactcggcaggggcactgggtcattgggttaatgatcgaactactgagtcattgattgaaccgcatgactga 161  Q
    |||||||||||||||||| |||||| |||||||| ||  || ||||||||| || ||  ||| |||||| | || |||| || |||||||||||||||||    
T  64345 catagttttaaaactcggctcggtcatcgactcgacataggtactgggtcactgagtcgatggtcgaaccattgggtcactggttgaaccgcatgactga 64444  T
Q  162 a 162  Q
    |    
T  64445 a 64445  T

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