View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF20869_low_14 (Length: 623)

Name: NF20869_low_14
Description: NF20869
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF20869_low_14
NF20869_low_14
[»] chr8 (33 HSPs)
chr8 (1-312)||(34723527-34723827)
chr8 (443-605)||(34724380-34724542)
chr8 (302-371)||(34724239-34724308)
chr8 (109-271)||(15884556-15884718)
chr8 (108-271)||(43027252-43027416)
chr8 (142-271)||(8141049-8141179)
chr8 (108-277)||(14666070-14666240)
chr8 (108-271)||(2467117-2467281)
chr8 (108-271)||(6100419-6100583)
chr8 (108-271)||(8997543-8997707)
chr8 (152-271)||(38922457-38922577)
chr8 (114-267)||(18373961-18374115)
chr8 (108-276)||(45521111-45521279)
chr8 (108-266)||(43032853-43033012)
chr8 (141-271)||(44893310-44893441)
chr8 (141-271)||(583761-583890)
chr8 (142-271)||(10927553-10927683)
chr8 (142-271)||(24837189-24837319)
chr8 (108-267)||(17981392-17981552)
chr8 (109-271)||(7673657-7673816)
chr8 (186-271)||(17845680-17845764)
chr8 (167-271)||(34613836-34613941)
chr8 (108-192)||(2964103-2964187)
chr8 (108-271)||(16893884-16894046)
chr8 (141-267)||(44031467-44031599)
chr8 (141-271)||(13085471-13085602)
chr8 (141-267)||(33401831-33401958)
chr8 (146-271)||(1013014-1013140)
chr8 (142-192)||(13357989-13358039)
chr8 (108-173)||(22212514-22212579)
chr8 (475-520)||(35300941-35300986)
chr8 (108-156)||(16291202-16291250)
chr8 (108-192)||(26570951-26571035)
[»] chr4 (48 HSPs)
chr4 (143-271)||(24166398-24166527)
chr4 (108-271)||(38165975-38166139)
chr4 (142-271)||(1446774-1446904)
chr4 (106-271)||(2559255-2559421)
chr4 (142-271)||(29895735-29895865)
chr4 (146-271)||(53599008-53599134)
chr4 (114-271)||(1940782-1940937)
chr4 (108-271)||(47078406-47078570)
chr4 (141-256)||(15839967-15840082)
chr4 (106-271)||(27248376-27248540)
chr4 (141-271)||(48317307-48317438)
chr4 (142-271)||(43458561-43458691)
chr4 (144-268)||(29588687-29588812)
chr4 (108-267)||(5472847-5473007)
chr4 (108-239)||(42722576-42722708)
chr4 (142-249)||(49260698-49260806)
chr4 (141-271)||(3574478-3574609)
chr4 (108-238)||(7246645-7246776)
chr4 (109-271)||(13073486-13073649)
chr4 (108-239)||(21192622-21192752)
chr4 (141-271)||(41162914-41163045)
chr4 (108-258)||(47682381-47682531)
chr4 (141-270)||(49952178-49952308)
chr4 (141-250)||(55005338-55005448)
chr4 (108-192)||(17080071-17080155)
chr4 (108-271)||(55920982-55921146)
chr4 (109-271)||(33647669-33647832)
chr4 (141-260)||(36262799-36262917)
chr4 (142-256)||(295566-295680)
chr4 (142-255)||(20354601-20354715)
chr4 (141-209)||(20532441-20532510)
chr4 (109-256)||(40780861-40781009)
chr4 (114-236)||(3159474-3159597)
chr4 (141-271)||(12703577-12703708)
chr4 (106-185)||(14567274-14567353)
chr4 (142-255)||(20128273-20128387)
chr4 (146-271)||(38075381-38075507)
chr4 (222-271)||(19651559-19651608)
chr4 (146-266)||(20421727-20421847)
chr4 (120-192)||(8424582-8424654)
chr4 (108-271)||(8888970-8889134)
chr4 (108-192)||(14124044-14124128)
chr4 (108-192)||(30317261-30317345)
chr4 (144-238)||(48015108-48015203)
chr4 (106-173)||(54946296-54946363)
chr4 (141-195)||(50485968-50486022)
chr4 (234-271)||(4736545-4736582)
chr4 (215-271)||(38841472-38841528)
[»] chr6 (22 HSPs)
chr6 (108-271)||(14107357-14107521)
chr6 (108-271)||(21898595-21898759)
chr6 (142-271)||(2271336-2271464)
chr6 (142-271)||(29333172-29333301)
chr6 (108-271)||(5253222-5253386)
chr6 (106-271)||(8938658-8938824)
chr6 (108-249)||(12606399-12606541)
chr6 (108-268)||(3601034-3601195)
chr6 (108-192)||(9633624-9633708)
chr6 (114-206)||(13391299-13391391)
chr6 (108-192)||(30788852-30788936)
chr6 (142-268)||(13036037-13036164)
chr6 (142-271)||(19230592-19230720)
chr6 (119-271)||(29444775-29444928)
chr6 (108-271)||(8611973-8612137)
chr6 (108-272)||(19089444-19089609)
chr6 (223-271)||(5759575-5759623)
chr6 (108-271)||(6606096-6606260)
chr6 (108-271)||(8932608-8932772)
chr6 (108-271)||(8944074-8944238)
chr6 (108-195)||(5029841-5029928)
chr6 (108-239)||(12635793-12635925)
[»] chr1 (42 HSPs)
chr1 (142-271)||(5855466-5855596)
chr1 (108-271)||(10422732-10422896)
chr1 (142-255)||(14254302-14254416)
chr1 (118-271)||(40288487-40288641)
chr1 (108-256)||(9659179-9659327)
chr1 (108-271)||(17642004-17642168)
chr1 (108-271)||(11397889-11398052)
chr1 (142-271)||(49078058-49078188)
chr1 (108-271)||(26660082-26660245)
chr1 (108-267)||(32150922-32151082)
chr1 (108-267)||(43959821-43959981)
chr1 (142-271)||(2980965-2981095)
chr1 (142-271)||(17092511-17092641)
chr1 (106-207)||(50371832-50371934)
chr1 (108-264)||(16956417-16956574)
chr1 (108-276)||(18915806-18915975)
chr1 (142-271)||(46929772-46929901)
chr1 (143-271)||(48798105-48798234)
chr1 (108-271)||(8763935-8764099)
chr1 (115-207)||(21849212-21849304)
chr1 (108-271)||(33004015-33004179)
chr1 (108-270)||(41663856-41664019)
chr1 (142-255)||(30927761-30927875)
chr1 (142-271)||(33418149-33418279)
chr1 (142-268)||(47312933-47313059)
chr1 (106-268)||(2567223-2567386)
chr1 (117-271)||(15465909-15466064)
chr1 (108-207)||(44969673-44969772)
chr1 (108-190)||(37339846-37339928)
chr1 (108-193)||(10172971-10173056)
chr1 (146-254)||(10336477-10336586)
chr1 (108-271)||(26325756-26325920)
chr1 (108-183)||(4581682-4581757)
chr1 (142-267)||(32819-32945)
chr1 (142-207)||(13262091-13262157)
chr1 (106-267)||(14357703-14357865)
chr1 (147-271)||(34877934-34878059)
chr1 (108-252)||(45361882-45362027)
chr1 (144-251)||(17358507-17358615)
chr1 (144-192)||(28416970-28417018)
chr1 (114-273)||(31576553-31576713)
chr1 (219-271)||(40226354-40226406)
[»] chr7 (45 HSPs)
chr7 (145-276)||(4195238-4195370)
chr7 (108-269)||(34659174-34659336)
chr7 (108-271)||(48804629-48804793)
chr7 (114-271)||(5039423-5039581)
chr7 (108-271)||(43346778-43346942)
chr7 (108-271)||(43861971-43862135)
chr7 (114-268)||(1797409-1797564)
chr7 (114-271)||(16802069-16802227)
chr7 (142-271)||(17748415-17748545)
chr7 (108-268)||(5069814-5069975)
chr7 (108-271)||(22993366-22993530)
chr7 (141-271)||(4228786-4228914)
chr7 (114-271)||(13095804-13095962)
chr7 (106-192)||(38578864-38578950)
chr7 (142-271)||(47341822-47341952)
chr7 (106-271)||(22573759-22573924)
chr7 (108-271)||(10047875-10048039)
chr7 (146-255)||(42210299-42210409)
chr7 (144-271)||(43925458-43925586)
chr7 (217-268)||(11607080-11607131)
chr7 (109-271)||(26423288-26423450)
chr7 (105-207)||(27028289-27028392)
chr7 (141-271)||(19914735-19914865)
chr7 (175-252)||(45853586-45853664)
chr7 (142-191)||(3353451-3353500)
chr7 (115-271)||(21530694-21530851)
chr7 (108-192)||(4705983-4706067)
chr7 (141-256)||(14535252-14535368)
chr7 (108-271)||(14650263-14650427)
chr7 (108-239)||(21190779-21190911)
chr7 (168-271)||(22268088-22268192)
chr7 (129-208)||(23658188-23658268)
chr7 (115-175)||(28396166-28396226)
chr7 (108-251)||(36619253-36619397)
chr7 (108-239)||(37514899-37515031)
chr7 (108-188)||(41945503-41945583)
chr7 (141-271)||(45960035-45960165)
chr7 (142-207)||(30827302-30827368)
chr7 (108-162)||(34127644-34127698)
chr7 (477-542)||(11680588-11680653)
chr7 (144-272)||(42032041-42032170)
chr7 (108-207)||(1605951-1606051)
chr7 (108-192)||(8734685-8734769)
chr7 (108-268)||(24969325-24969484)
chr7 (223-271)||(34127735-34127783)
[»] chr3 (50 HSPs)
chr3 (108-271)||(13893869-13894033)
chr3 (108-271)||(7328787-7328950)
chr3 (108-271)||(15320129-15320293)
chr3 (142-271)||(33251605-33251735)
chr3 (108-271)||(29127862-29128026)
chr3 (108-271)||(54261169-54261333)
chr3 (142-271)||(45877397-45877527)
chr3 (114-271)||(55069685-55069843)
chr3 (108-192)||(26361967-26362051)
chr3 (108-267)||(28572211-28572371)
chr3 (142-268)||(6462358-6462485)
chr3 (141-271)||(10855327-10855458)
chr3 (114-249)||(15795500-15795635)
chr3 (108-271)||(47749105-47749268)
chr3 (141-271)||(51682987-51683118)
chr3 (142-271)||(3755513-3755643)
chr3 (149-271)||(10040500-10040622)
chr3 (141-271)||(39849015-39849145)
chr3 (108-271)||(7310703-7310867)
chr3 (109-192)||(3507534-3507617)
chr3 (141-271)||(42412807-42412938)
chr3 (142-271)||(26207835-26207965)
chr3 (106-271)||(35315899-35316065)
chr3 (143-271)||(29135856-29135985)
chr3 (108-192)||(8164576-8164660)
chr3 (140-271)||(28242221-28242353)
chr3 (108-271)||(41630512-41630676)
chr3 (155-266)||(49082772-49082884)
chr3 (105-271)||(29762152-29762319)
chr3 (108-163)||(47164158-47164213)
chr3 (142-271)||(25294903-25295033)
chr3 (170-271)||(50682420-50682522)
chr3 (119-207)||(30767258-30767347)
chr3 (146-270)||(41219537-41219661)
chr3 (116-207)||(26043819-26043911)
chr3 (115-175)||(43330739-43330799)
chr3 (141-192)||(7648763-7648814)
chr3 (108-163)||(36043674-36043729)
chr3 (118-267)||(22405553-22405703)
chr3 (145-195)||(34460547-34460597)
chr3 (114-192)||(35923629-35923707)
chr3 (142-271)||(49198294-49198424)
chr3 (146-239)||(52364838-52364932)
chr3 (108-193)||(15084945-15085030)
chr3 (108-252)||(47219106-47219251)
chr3 (114-191)||(50405609-50405686)
chr3 (144-207)||(4638161-4638225)
chr3 (108-207)||(7650234-7650334)
chr3 (223-271)||(48341963-48342011)
chr3 (223-271)||(52011084-52011132)
[»] chr2 (52 HSPs)
chr2 (108-271)||(7747217-7747381)
chr2 (142-271)||(22593078-22593207)
chr2 (108-271)||(10026615-10026779)
chr2 (108-271)||(18902529-18902693)
chr2 (108-271)||(38005345-38005509)
chr2 (114-268)||(21286390-21286545)
chr2 (141-271)||(29653571-29653701)
chr2 (114-267)||(7787003-7787157)
chr2 (143-271)||(13026445-13026574)
chr2 (120-268)||(45263678-45263827)
chr2 (108-271)||(331444-331608)
chr2 (108-255)||(25540403-25540551)
chr2 (117-271)||(42770659-42770814)
chr2 (108-271)||(44945537-44945700)
chr2 (106-271)||(2550811-2550977)
chr2 (142-271)||(29422158-29422288)
chr2 (106-273)||(6358148-6358316)
chr2 (108-271)||(8410074-8410238)
chr2 (108-239)||(10823035-10823167)
chr2 (108-254)||(41220595-41220742)
chr2 (142-228)||(35946725-35946811)
chr2 (114-271)||(39201513-39201671)
chr2 (108-273)||(44139425-44139591)
chr2 (108-268)||(37560119-37560280)
chr2 (108-207)||(12455317-12455417)
chr2 (108-271)||(12864167-12864331)
chr2 (105-272)||(38962705-38962873)
chr2 (141-271)||(21180346-21180477)
chr2 (106-191)||(9360745-9360830)
chr2 (114-207)||(24179576-24179669)
chr2 (108-271)||(2528340-2528504)
chr2 (108-271)||(14169608-14169772)
chr2 (141-271)||(15079426-15079557)
chr2 (106-252)||(16034899-16035046)
chr2 (142-256)||(25549686-25549801)
chr2 (109-271)||(20612534-20612699)
chr2 (142-207)||(34130335-34130400)
chr2 (108-192)||(27725963-27726047)
chr2 (108-271)||(41031905-41032068)
chr2 (109-271)||(10046477-10046639)
chr2 (196-267)||(20963198-20963268)
chr2 (181-271)||(29697467-29697558)
chr2 (158-276)||(40968964-40969083)
chr2 (108-273)||(3811690-3811856)
chr2 (142-256)||(16813198-16813312)
chr2 (142-256)||(16852477-16852591)
chr2 (143-206)||(28525489-28525554)
chr2 (146-271)||(34356149-34356275)
chr2 (143-256)||(39806919-39807033)
chr2 (114-195)||(10669612-10669693)
chr2 (222-271)||(23500795-23500844)
chr2 (117-204)||(26805306-26805394)
[»] chr5 (47 HSPs)
chr5 (142-271)||(9168286-9168414)
chr5 (144-271)||(38897754-38897881)
chr5 (108-271)||(1538375-1538539)
chr5 (108-271)||(5731919-5732083)
chr5 (142-272)||(19572667-19572798)
chr5 (106-256)||(25417180-25417331)
chr5 (142-271)||(37263185-37263314)
chr5 (142-271)||(41163493-41163622)
chr5 (108-271)||(9812816-9812980)
chr5 (108-271)||(42086271-42086435)
chr5 (108-238)||(12081885-12082016)
chr5 (114-271)||(3653919-3654075)
chr5 (108-271)||(5079275-5079438)
chr5 (108-271)||(12704958-12705122)
chr5 (132-271)||(26077085-26077225)
chr5 (141-271)||(7866525-7866656)
chr5 (108-230)||(40117400-40117523)
chr5 (114-191)||(6764462-6764539)
chr5 (108-272)||(8513462-8513627)
chr5 (168-271)||(16755005-16755109)
chr5 (217-261)||(28862779-28862823)
chr5 (196-255)||(18327730-18327789)
chr5 (146-271)||(20682654-20682781)
chr5 (114-201)||(24463891-24463978)
chr5 (106-251)||(11845798-11845944)
chr5 (106-207)||(14588614-14588716)
chr5 (146-271)||(18136317-18136443)
chr5 (142-271)||(20525782-20525912)
chr5 (150-271)||(28857072-28857194)
chr5 (155-271)||(35403558-35403675)
chr5 (108-192)||(9805028-9805112)
chr5 (141-276)||(35561850-35561986)
chr5 (108-192)||(41801001-41801085)
chr5 (108-271)||(2485141-2485304)
chr5 (109-209)||(21487623-21487721)
chr5 (129-192)||(30995145-30995208)
chr5 (217-271)||(1826801-1826855)
chr5 (142-271)||(30349523-30349653)
chr5 (114-192)||(39099784-39099862)
chr5 (142-192)||(42291538-42291588)
chr5 (118-271)||(18294493-18294646)
chr5 (222-271)||(23383592-23383641)
chr5 (146-195)||(24875366-24875415)
chr5 (141-202)||(25452939-25453000)
chr5 (142-242)||(35638066-35638167)
chr5 (223-271)||(6767166-6767214)
chr5 (108-192)||(13664284-13664368)
[»] scaffold0006 (1 HSPs)
scaffold0006 (114-271)||(68463-68618)
[»] scaffold0029 (1 HSPs)
scaffold0029 (115-271)||(40990-41147)
[»] scaffold0004 (1 HSPs)
scaffold0004 (141-265)||(95013-95136)
[»] scaffold0011 (2 HSPs)
scaffold0011 (109-268)||(186467-186626)
scaffold0011 (108-163)||(224372-224427)
[»] scaffold0209 (1 HSPs)
scaffold0209 (141-271)||(12521-12650)
[»] scaffold0086 (1 HSPs)
scaffold0086 (142-271)||(26129-26259)
[»] scaffold0170 (1 HSPs)
scaffold0170 (142-206)||(9856-9921)
[»] scaffold0316 (1 HSPs)
scaffold0316 (108-207)||(1613-1713)
[»] scaffold0291 (1 HSPs)
scaffold0291 (108-192)||(6881-6965)
[»] scaffold0010 (2 HSPs)
scaffold0010 (108-192)||(155710-155794)
scaffold0010 (168-271)||(25843-25947)
[»] scaffold0005 (1 HSPs)
scaffold0005 (106-185)||(250022-250101)
[»] scaffold0384 (1 HSPs)
scaffold0384 (142-271)||(5919-6048)
[»] scaffold0002 (1 HSPs)
scaffold0002 (108-256)||(319383-319532)
[»] scaffold0009 (1 HSPs)
scaffold0009 (108-195)||(42831-42918)
[»] scaffold0016 (1 HSPs)
scaffold0016 (222-271)||(8824-8873)
[»] scaffold0376 (1 HSPs)
scaffold0376 (108-192)||(12696-12780)


Alignment Details
Target: chr8 (Bit Score: 172; Significance: 4e-92; HSPs: 33)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 172; E-Value: 4e-92
Query Start/End: Original strand, 1 - 312
Target Start/End: Original strand, 34723527 - 34723827
Alignment:
Q  1 gacagtggacaggtggacgcaggaaagacaaaatgaagcaggtttcttcttctctctgtctcccttctccccacagcacacaacatattatgtgcannnn 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||        
T  34723527 gacagtggacaggtggacgcaggaaagacaaaatgaagcaggtttcttcttctctctgtctccattctccccacagcacacaacatattatgtgcatttt 34723626  T
Q  101 nnnncttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaa 200  Q
         | ||||||||||||||||||||||||||        ||| |||||| |||| |||||||| ||||||||||  ||||||| |||||  ||||| |    
T  34723627 tttt-tgctttcacaccggttttcgacacacca--------cgattaatccagctcttgcgtaaaggcatgcgcaa--gccaaacattgtttccctggga 34723715  T
Q  201 atcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttcatattatgtgcattttaattacagataa 300  Q
    |||||||| || |||||||||||| |||||||||||||| |||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||    
T  34723716 atcgaacttagtatttcccgaatatgtctttggaaggagctcattgccaccggagctcaaacaacttggttcatattatgtgcattttaattacagataa 34723815  T
Q  301 gaacgattaact 312  Q
     |||||||||||    
T  34723816 taacgattaact 34723827  T

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Target: chr8; HSP #2
Raw Score: 103; E-Value: 6e-51
Query Start/End: Original strand, 443 - 605
Target Start/End: Original strand, 34724380 - 34724542
Alignment:
Q  443 gtctctaattataagactattacnnnnnnnngtatttgtccttaaatataaaaccgcctacaaatttttagatgcattcct-tactctgttttcaactat 541  Q
    |||||||||||||||||||||||        || |||||||||||||||||||||| |||||||||||||||||||||  | |||||| ||| |||||||    
T  34724380 gtctctaattataagactattacaaaaaaa-gtgtttgtccttaaatataaaaccgtctacaaatttttagatgcatttttatactctttttccaactat 34724478  T
Q  542 accttttagtaactacgaaggtgctaagtagctatacttcttccttgatacttcgtccttgaat 605  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34724479 accttttagtaactacgaaggtgctaagtagctatacttcttccttgatacttcgtccttgaat 34724542  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 302 - 371
Target Start/End: Original strand, 34724239 - 34724308
Alignment:
Q  302 aacgattaactatcatatcattttatgtactaatttgaatgttatcacgcaaaaatttaaaatagttatc 371  Q
    |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||    
T  34724239 aacgattaactatcatatcattttatgtactaatttgaatgttaccacgcaaaaatttgaaatagttatc 34724308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 15884556 - 15884718
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaact 208  Q
    |||| ||||||||| |||| |||||||| |  ||||||||||||||||||||||| | ||||||||| | |||||  ||||||| ||||| ||||||||     
T  15884556 tttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcacttgccaagtgttgttcccctgggaatcgaacc 15884655  T
Q  209 cagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | ||| |||   |||||| |||||||||| || || |||||||||| ||||||||||||||    
T  15884656 cggtattccccaggtacgtccttggaaggagctccttaccactggagcccaatcaacttggtt 15884718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 43027416 - 43027252
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| || |||||| |||| || |||||||   ||||||||||||||| |||||| | ||||||||| ||| ||| |||||||| |||||| |||||||    
T  43027416 ctttcgcatcggtttccgacccatcaaagatggacgactaatccggctcatgcgtagaggcatgcgcattggacaatcgttgttcctcctgggaatcgaa 43027317  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | ||| ||| ||| |||||||  ||| || ||| |||||||||||||||| ||| ||||||||||    
T  43027316 cccagtattccccaaatacgttcttgaaatgagctcattgccactggagcccaaacaacttggtt 43027252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 8141179 - 8141049
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||| | |||| |||||| | ||||||||| ||||||| ||||||| | |||||||||||||| | | ||| |||||||||||| ||||||| ||     
T  8141179 cgactaattcagctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctggaaatcgaacccggtattccccgaatacgtccttggaagcagc 8141080  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  8141079 tccttgccactggagcccaaacaacttggtt 8141049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 108 - 277
Target Start/End: Original strand, 14666070 - 14666240
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||| ||||||   |  |||||||||| |||| ||||||| | ||||||||| |||||||  |||||| | ||||| |||||||    
T  14666070 ctttcgcaccggttttcgacccaccaactgtgggcgactaatctggcttgtgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaa 14666169  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttcatatt 277  Q
    | | | ||| |||| ||||||| |||||| ||| || ||||||||||||| ||| |||||||||| |||||    
T  14666170 cccggtattccccggatacgtccttggaatgagctccttgccactggagcccaagcaacttggttaatatt 14666240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 2467117 - 2467281
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||||||||||   |   ||||||||||||||| ||| || |  |||||||| |||||||  ||||||| || |||||||||||    
T  2467117 ctttcgcaccggtttccgacacaccaattgtggacgactaatccggctcatgcatagagacatgcgcactggccaagagttgttccccctggaaatcgaa 2467216  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  2467217 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 2467281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 6100583 - 6100419
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| || ||||||||||| ||| |||| |   ||||||||||||||| ||||||   ||||||||| ||||||| ||||||| ||||||| |||||||    
T  6100583 ctttcgcagcggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagtggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 6100484  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| ||| |||||| || ||||||||| ||| ||| ||||||||||    
T  6100483 cccggtattccccggatacgtccttgaaaggagctccttgccactgaagcccaaacaacttggtt 6100419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 8997543 - 8997707
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||||||||||   ||||||||| ||||| |||||| | ||||||| | |||| ||||||||||| || | | |||||||    
T  8997543 ctttcgcaccggtttccgacccaccaaagatgaacgactaatctggctcatgcgtataggcatgcgaactggcgaaacgttgttccccttaggaatcgaa 8997642  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||||||| ||| ||| ||||||||| ||||||||||||  ||| ||||||||||    
T  8997643 cacggtattccccgaatatgtccttgaaaggagttccttgccactggagtccaagcaacttggtt 8997707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 152 - 271
Target Start/End: Original strand, 38922457 - 38922577
Alignment:
Q  152 ggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccac 250  Q
    |||||||||||||| ||||||||| ||||||| |||||||| | |||| |||||||| | | ||| ||||  |||||| |||||||||| || |||||||    
T  38922457 ggctcgtgcgtaaaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccccgggtacgtccttggaaggagctccttgccac 38922556  T
Q  251 tggagctcaatcaacttggtt 271  Q
    |||||| ||| ||||||||||    
T  38922557 tggagcccaagcaacttggtt 38922577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 267
Target Start/End: Complemental strand, 18374115 - 18373961
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaactcagc 212  Q
    |||||||||||||| |||||||| |   ||||||||||||||| |||||| | ||||||||| ||| ||| ||||||||| ||||  ||||||||   |     
T  18374115 caccggttttcgacccaccaaagttggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttctccctgagaatcgaacctggt 18374016  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    |||||||| |||  ||||||||| ||| || |||||| |||||| ||| ||||||    
T  18374015 atttcccggatatatctttggaatgagctccttgccattggagcccaaacaactt 18373961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 276
Target Start/End: Complemental strand, 45521279 - 45521111
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| ||||||||| |||| || ||||| |  |||||||||||||||| |||||| | ||||||||| ||  |||  ||||||| ||||| ||||||||    
T  45521279 ctttcgcaccggtttccgacccatcaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactgatcaagtgttgttcccctgggaatcgaac 45521180  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttcatat 276  Q
     | | ||| ||||  ||| || |||||| ||  || ||||||||||||| ||| |||||||||| ||||    
T  45521179 ccggtattccccgggtacatccttggaatgaactccttgccactggagcccaagcaacttggttgatat 45521111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 266
Target Start/End: Complemental strand, 43033012 - 43032853
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||  ||| |||||||| |  ||||||||||||||||||| ||| | ||||||||| ||||||| ||||||| | ||||| |||||||    
T  43033012 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaa 43032913  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaact 266  Q
      |   |||||||  |||| | ||||||||||  || ||||||||||||| ||| |||||    
T  43032912 tccgatatttcccagatacatttttggaaggaactccttgccactggagcccaaacaact 43032853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 44893310 - 44893441
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||| |||||||||||||||||| | |||||| || ||||||| | |||||| || | ||||| |||| | | ||| ||||  |||||| ||||||||||    
T  44893310 gcgattaatccggctcgtgcgtagaggcatgcacactggccaagcattgttccccctagaaattgaacccggtattccccgggtacgtccttggaaggag 44893409  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||||||||||||| ||| ||||||||||    
T  44893410 ctccttgccactggagcccaaacaacttggtt 44893441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 583890 - 583761
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||| ||| |||||| | ||||||||| ||| ||| |||||||| ||| | |||||||| | | ||||| ||| |||||| ||||||| ||     
T  583890 gcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttc-cctaggaatcgaacccggtatttctcgagtacgtccttggaagtagc 583792  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || |||||||| |||| ||| ||||||||||    
T  583791 tccttgccactagagcccaaacaacttggtt 583761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 10927683 - 10927553
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| ||||||| ||||||| ||||| | |||||||| | | ||| ||||  |||||| ||| ||| ||     
T  10927683 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaacccggtattccccgggtacgtccttgaaagaagc 10927584  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||| ||| ||| ||||||||||    
T  10927583 tccttgccactgaagcccaagcaacttggtt 10927553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 24837319 - 24837189
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||| |||||||| || | |||||  || ||||||| ||||||||||| ||| |||||||| | | ||| ||||  |||||  ||||||||||     
T  24837319 cgactaatcctgctcgtgcttagaggcatgaacactggccaagcgttgttctccctgggaatcgaacacggtattccccgggtacgtacttggaaggagc 24837220  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  24837219 tccttgccactggagcccaagcaacttggtt 24837189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 267
Target Start/End: Complemental strand, 17981552 - 17981392
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  || |||||| || |||||||||| | |||||| || ||| |||  ||||||| || ||| |||||||    
T  17981552 ctttcgcaccggtttccgactcaccaaagctgggcaactaattcgactcgtgcgtagaggcatgcacactggtcaagagttgttccccctgggaatcgaa 17981453  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    | | | ||||||||  ||| || |||||||||| || ||||||||||||| ||| ||||||    
T  17981452 cccggtatttcccgggtacatccttggaaggagctccttgccactggagcccaagcaactt 17981392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 7673657 - 7673816
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaact 208  Q
    |||| |||||||||||||  ||| ||||||  ||||  ||||||||||||||||| | |||||| || | |||||||||||||| ||    |||||||||    
T  7673657 tttcgcaccggttttcgatccactaaagatgggcgaaaaatccggctcgtgcgtagaggcatgcacactagccaaacgttgttcccc--ctaatcgaact 7673754  T
Q  209 cagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
        ||| |||  ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  7673755 tgatattccccagatacgtccttggaaggagctccttgccactggagc-caagcaacttggtt 7673816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 186 - 271
Target Start/End: Complemental strand, 17845764 - 17845680
Alignment:
Q  186 gttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||| ||||| |||| ||| ||| ||| ||||| ||| || |||||||||| |||||||||||||||| ||| ||||||||||    
T  17845764 gttgttcccctgggaatcaaac-cagtattccccgagtacatccttggaaggagctcattgccactggagcccaaacaacttggtt 17845680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 167 - 271
Target Start/End: Original strand, 34613836 - 34613941
Alignment:
Q  167 gcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaac 265  Q
    ||||||| | |||||| ||||||||| |||||| |||||||| |   ||| |||| |||||  ||||||||||| |||||||||||||||| ||| |||     
T  34613836 gcatgcgtactggccagacgttgttcctcctgggaatcgaacccgatattccccggatacggttttggaaggagctcattgccactggagcccaaacaat 34613935  T
Q  266 ttggtt 271  Q
    ||||||    
T  34613936 ttggtt 34613941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 2964187 - 2964103
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| |||||||||  ||| |||||||| |  ||||||||||||| ||||||||| | |||||| || ||||||| ||||||||    
T  2964187 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacattggccaagcgttgttc 2964103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 16894046 - 16893884
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  ||||| |||||||||| |||||||| ||||| | | ||||||| |||| ||| || ||  |||||||    
T  16894046 ctttcgcaccggtttccgac-caccaaaggtgggcgac-aatccggctcatgcgtaaaggcatgtgtactggccaagcgttattccccctgtgaatcgaa 16893949  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| |||| ||||||| ||||||||||||| ||||||||  ||| ||| ||||||||||    
T  16893948 cccgatattccccggatacgtcattggaaggagttccttgccactatagcccaagcaacttggtt 16893884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 44031467 - 44031599
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaat-----ggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttgga 234  Q
    ||||||||||||||||||||| | | |||||| || |     |||||| |||||||| || |||||||||||| |   ||||||||  ||| || |||||    
T  44031467 gcgactaatccggctcgtgcgcagaggcatgcacactacactggccaagcgttgttccccctggaaatcgaacccgatatttcccggttacatccttgga 44031566  T
Q  235 aggagttcattgccactggagctcaatcaactt 267  Q
    |||||||| |||||||| |||||||| ||||||    
T  44031567 aggagttccttgccactagagctcaaacaactt 44031599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 13085602 - 13085471
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||| ||||| |||||||||||| | | |||| || |||| ||||||||||| | |||  |||||||| | | ||| |||| ||||||| ||||||||||    
T  13085602 gcgattaatctggctcgtgcgtagaggtatgcacactggctaaacgttgttccctctgagaatcgaacccggtattccccggatacgtccttggaaggag 13085503  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || | ||||||||||| ||| ||| ||||||    
T  13085502 ctcctcgccactggagcccaaacaagttggtt 13085471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 267
Target Start/End: Original strand, 33401831 - 33401958
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||||| ||| |||||| | |||||| || ||| |||  ||||||| || || ||||||||| | | ||| ||||| |||||| ||| ||||||    
T  33401831 gcgactaatccgactcatgcgtagaggcatgcacactggtcaagtgttgttccccctgaaaatcgaacccggtattccccgagtacgtccttgaaaggag 33401930  T
Q  240 ttcattgccactggagctcaatcaactt 267  Q
     || ||||||||||||| ||| ||||||    
T  33401931 ctccttgccactggagcccaaacaactt 33401958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 1013014 - 1013140
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    |||| |||||| |||||| | ||||| | | ||||||| |||||||| || ||| |||||||| | | ||| |||| ||||||| ||||||  || || |    
T  1013014 taattcggctcatgcgtagaggcatgtgtactggccaagcgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaaaagctcct 1013113  T
Q  245 tgccactggagctcaatcaacttggtt 271  Q
    |||||||||||| ||| ||||||||||    
T  1013114 tgccactggagcccaagcaacttggtt 1013140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 13357989 - 13358039
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||||||||||||||| || | |||||| || ||||||||||||||||    
T  13357989 cgactaatccggctcgtgcatagaggcatgcacattggccaaacgttgttc 13358039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 173
Target Start/End: Original strand, 22212514 - 22212579
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcg 173  Q
    ||||| |||||||||||||  |||||||| |  |||||||||||||| |||||||| | |||||||    
T  22212514 ctttcgcaccggttttcgaaccaccaaaggtgagcgactaatccggcccgtgcgtagaagcatgcg 22212579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 475 - 520
Target Start/End: Original strand, 35300941 - 35300986
Alignment:
Q  475 tatttgtccttaaatataaaaccgcctacaaatttttagatgcatt 520  Q
    |||||||||||||||| || |||  |||||||||||||||||||||    
T  35300941 tatttgtccttaaatacaagaccttctacaaatttttagatgcatt 35300986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 156
Target Start/End: Original strand, 16291202 - 16291250
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctc 156  Q
    |||||||||||||||||||| |||||||| |  ||||||||||| ||||    
T  16291202 ctttcacaccggttttcgacccaccaaaggtgagcgactaatccagctc 16291250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 26571035 - 26570951
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    |||||||| |||||| |||| || ||||| |   ||||||||||||||| |||||| |||||| | || ||||||| ||||||||    
T  26571035 ctttcacatcggtttccgactcatcaaaggtggacgactaatccggctcatgcgtagatgcatacacactggccaagcgttgttc 26570951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 62; Significance: 2e-26; HSPs: 48)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 143 - 271
Target Start/End: Complemental strand, 24166527 - 24166398
Alignment:
Q  143 gactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcct-ggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||| |||||||||||| | ||||||||| |||||||||||||||  ||| || |||||||| ||| ||| ||||| |||||| |||||||||| |    
T  24166527 gactaatctggctcgtgcgtagaggcatgcgcactggccaaacgttgtttcccttgggaatcgaacccagtattccccgagtacgtccttggaaggagct 24166428  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||| ||||||||||||||    
T  24166427 ccttgccactggagcccaatcaacttggtt 24166398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 38166139 - 38165975
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  ||||||||||||||||||||||| |  |||||||| ||||||| ||||||| | ||||| |||| ||    
T  38166139 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagagccatgcgcactggccaagcgttgttccccctgggaatccaa 38166040  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | ||| ||| |||| ||||||| |||||||||| || |||||| |||||| ||| ||||||||||    
T  38166039 cccagtattccccggatacgtccttggaaggagctccttgccagtggagcccaaacaacttggtt 38165975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 1446904 - 1446774
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| |||||||  ||||||| || ||| |||||||| | | ||| |||| ||||||| ||||||||||     
T  1446904 cgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagc 1446805  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  1446804 tccttgccactggagcccaagcaacttggtt 1446774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 2559421 - 2559255
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcg 204  Q
    ||||||| ||||||||| |||| |||||||| |   ||| |||||||||| ||||||| | ||||||||| ||||||| |||||||| |||| |||||||    
T  2559421 ttctttcgcaccggtttccgacccaccaaaggtggacgagtaatccggcttgtgcgtagaggcatgcgcactggccaagcgttgttcctcctagaaatcg 2559322  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||  | | ||| |||   |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  2559321 aatccggtattccccaggtacgtccttggaaggagctcgttgccactggagcccaaacaacttggtt 2559255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 29895865 - 29895735
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| |||||||  ||||||| || ||| |||||||| | | ||| |||| ||||||| ||||||||||     
T  29895865 cgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccggatacgtccttggaaggagc 29895766  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  29895765 tccttgccactggagcccaagcaacttggtt 29895735  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 53599134 - 53599008
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    ||||||||||| |||||| | ||||||||| ||||||||||||||| ||||||| |||||||| | | ||| ||||  |||||| |||||||||| || |    
T  53599134 taatccggctcatgcgtagaggcatgcgcactggccaaacgttgttcctcctgggaatcgaacccggtattccccgggtacgtccttggaaggagctcct 53599035  T
Q  245 tgccactggagctcaatcaacttggtt 271  Q
    ||||| |||||| ||| ||||||||||    
T  53599034 tgccaatggagcccaaacaacttggtt 53599008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 114 - 271
Target Start/End: Original strand, 1940782 - 1940937
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    |||||||||||||| |||||||| |  ||||||||||||||||||||||| | |||||||||    |||| ||||||| | ||||| |||||||| |       
T  1940782 caccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgca---cccaagcgttgttccccctgggaatcgaacccgat 1940878  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||||  |||||| |||||||||| || |||||||| |||| ||| ||||||||||    
T  1940879 atttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 1940937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 47078570 - 47078406
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||| ||||| |||| |||||| | |  ||||||||||||||||||||||| | ||||| ||| ||||||| ||||||| | ||||| |||||||    
T  47078570 ctttcgcactggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttccccctgggaatcgaa 47078471  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||||||| || ||||||||||| | ||| ||||||||||    
T  47078470 cccggtattccccgggtacgtccttggaaggagctccttgccactggaacccaagcaacttggtt 47078406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 256
Target Start/End: Original strand, 15839967 - 15840082
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||| |||||| | ||||||||| |||||||||||| |||| || | |||||||| | | ||| ||| | |||||| ||||||||||     
T  15839967 gcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttattcttctaggaatcgaacccggtattccccaagtacgtccttggaaggagc 15840066  T
Q  241 tcattgccactggagc 256  Q
    || |||||||||||||    
T  15840067 tccttgccactggagc 15840082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 27248540 - 27248376
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcg 204  Q
    |||||||||||| ||||  |||  ||||||| |  |||||||||| ||||| |||||| | ||||||||  ||||||| |||||||| |||||| | |||    
T  27248540 ttctttcacaccagtttctgacctaccaaaggtgggcgactaatctggctcctgcgtagaggcatgcgc--tggccaagcgttgttcctcctgggactcg 27248443  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| | | ||| |||| ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  27248442 aacccggtattccccggatacgtccttggaaggagctcgttgccactggagcccaagcaacttggtt 27248376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 48317307 - 48317438
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||||||||||||||||| | |||| | || || |||| |||||||| ||||| ||||||||  ||| ||||  |||||||||| |||||| |||    
T  48317307 gcgactaatccggctcgtgcgtagaggcatacacactgaccaagcgttgttcctcctgaaaatcgaatccagtatttttcgaatacgtcattggaatgag 48317406  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||||||||||||| ||| ||||||||||    
T  48317407 ctctttgccactggagcccaagcaacttggtt 48317438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 43458691 - 43458561
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||||| |||| | ||||||||| ||||||| |||| ||| |||||| |||||||  ||| ||| ||| |||||||| |||||| |||     
T  43458691 cgactaatccggctcgtccgtagaggcatgcgcactggccaagcgttcttcctcctgggaatcgaatccagtattccccaaatacgtccttggaatgagc 43458592  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    |  ||||||||||||| ||| ||||||||||    
T  43458591 ttcttgccactggagcccaagcaacttggtt 43458561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 144 - 268
Target Start/End: Complemental strand, 29588812 - 29588687
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttc 242  Q
    |||||||||||||||||||| | ||||||||| | ||||| | ||||| | ||||| |||||||| | | ||||||||   |||||||||||| ||| ||    
T  29588812 actaatccggctcgtgcgtagaggcatgcgcactagccaagctttgtttcccctgggaatcgaacccggtatttcccgggcacgtctttggaatgagctc 29588713  T
Q  243 attgccactggagctcaatcaacttg 268  Q
     ||||||||||||| |||||||||||    
T  29588712 cttgccactggagcccaatcaacttg 29588687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 267
Target Start/End: Original strand, 5472847 - 5473007
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| |||| ||||||||| |||||||| |  ||||||||||||||||||||||| | ||||||||| ||||||| ||||| ||| ||||  |||| ||    
T  5472847 ctttcgcaccagttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcaaa 5472946  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    |   | ||| |||| ||||||| ||| || ||| || ||||||||||||| ||| ||||||    
T  5472947 cctggtattccccggatacgtccttgaaatgagctccttgccactggagcccaaacaactt 5473007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 42722576 - 42722708
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||| ||| |||| |   ||||||||||||||| |||||| | ||||||||| ||||||| ||||||| ||||||| ||| |||    
T  42722576 ctttcgcaccggttttcgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaattgaa 42722675  T
Q  207 ctcagcatttcccgaatacgtctttggaaggag 239  Q
    | | | ||||||||  |||||| ||||||||||    
T  42722676 cccggtatttcccgggtacgtccttggaaggag 42722708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 142 - 249
Target Start/End: Original strand, 49260698 - 49260806
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||||||||| | ||||||||| ||||||| |||||||| || ||| ||| ||| |||| ||| |||| |||| || |||||||||||    
T  49260698 cgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccttgggaattgaattcagtattccccggatacatccttggaaggagt 49260797  T
Q  241 tcattgcca 249  Q
    || ||||||    
T  49260798 tccttgcca 49260806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 3574478 - 3574609
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||||| |||||||||| | ||||||||| |||||||  |||||||||| ||| ||| |||||| | ||| ||    |||||| ||||||||||    
T  3574478 gcgactaatccgactcgtgcgtagaggcatgcgcactggccaagtgttgttctccctgggaattgaactcggtattccctaggtacgtccttggaaggag 3574577  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||||||||||||| ||| ||||||||||    
T  3574578 ctccttgccactggagcccaagcaacttggtt 3574609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 238
Target Start/End: Original strand, 7246645 - 7246776
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||||||||| |||||| | ||||||||| ||||||| |||||||| | || | |||||||    
T  7246645 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcccactaggaatcgaa 7246744  T
Q  207 ctcagcatttcccgaatacgtctttggaagga 238  Q
    | ||| ||| ||||  |||||| |||||||||    
T  7246745 cccagtattccccgggtacgtccttggaagga 7246776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 109 - 271
Target Start/End: Complemental strand, 13073649 - 13073486
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaac 207  Q
    |||| ||||||||| |||| |||||||| ||  ||||||||| || || |||||| | | ||||||| ||||||||| |||||| || ||| ||||||||    
T  13073649 tttcgcaccggtttccgacccaccaaaggtaaacgactaatctggttcatgcgtagaggtatgcgcactggccaaacattgttccccatgggaatcgaac 13073550  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    || | |||  ||   |||||| |||||||||| ||||||||||| |||| ||| ||||||||||    
T  13073549 tcggtattctccaggtacgtccttggaaggagctcattgccactagagcccaaacaacttggtt 13073486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 21192752 - 21192622
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| |||||||||||||| |||||||  |  |||| ||||||| |||||||||| | ||||||||| ||||| |||||||||| |  |||| ||||||    
T  21192752 ctttcgcaccggttttcgactcaccaaatgtgggcgattaatccgactcgtgcgtagaggcatgcgcactggcccaacgttgttc-ctcggaactcgaac 21192654  T
Q  208 tcagcatttcccgaatacgtctttggaaggag 239  Q
     | | ||||||| |||||||| ||||||||||    
T  21192653 ccggtatttcccaaatacgtcattggaaggag 21192622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 41162914 - 41163045
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||| |||||| ||| || | |||||  || |||||||  ||||||| | ||||||||||||||| | |||||||| ||||||| ||||||||||    
T  41162914 gcgactaattcggctcatgcatagaagcatgtacactggccaagtgttgttccctctggaaatcgaactcggtatttcccggatacgtccttggaaggag 41163013  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||| ||||||||| ||| ||||||||||    
T  41163014 ctccttgtcactggagcccaagcaacttggtt 41163045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 258
Target Start/End: Original strand, 47682381 - 47682531
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| ||||||||| |||| |||||||| |  |||||||| |||||||||||||| |  |||| ||| |||||||||||| ||| ||||  |||| ||     
T  47682381 ctttcgcaccggtttccgacccaccaaaggtgggcgactaacccggctcgtgcgtagagacatgtgcactggccaaacgttattcccctgagaatcaaat 47682480  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctc 258  Q
    |||  |||  ||| |||||||||| |||||||||| ||| | |||||||||    
T  47682481 tcaatattctccggatacgtctttagaaggagttccttgtccctggagctc 47682531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 270
Target Start/End: Original strand, 49952178 - 49952308
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||||||||| |||||| | || |||||| || |||||||||||| || ||| ||||| |||  |  |||||||||||||||| ||||||||||    
T  49952178 gcgactaatccggctcatgcgtagaggcgtgcgcactgaccaaacgttgtttcttctgaaaatcaaacctaatatttcccgaatacgtccttggaaggag 49952277  T
Q  240 ttcattgccactggagctcaatcaacttggt 270  Q
     || |||||| |||| ||| | |||||||||    
T  49952278 ctccttgccaatggaactccaacaacttggt 49952308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 250
Target Start/End: Original strand, 55005338 - 55005448
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||||| || ||||||| | ||||||||||||| ||| ||||| ||| ||||  ||||||| || | |||||||  ||||||||||||||||||    
T  55005338 gcgactaatccgacttgtgcgtagaggcatgcgcaatggtcaagcgttgtttcccctgcgaatcgaattcggtatttcccagatacgtctttggaaggag 55005437  T
Q  240 ttcattgccac 250  Q
     ||||||||||    
T  55005438 ctcattgccac 55005448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 17080155 - 17080071
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| |||||||||||||  || ||||| | ||||||||||||||||| |||||| | ||||||||| ||||||| ||||||||    
T  17080155 ctttcgcaccggttttcgatccatcaaaggtgtgcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 17080071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 55921146 - 55920982
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  |||| ||||||||||| | |||| | ||||||||| || ||||  ||||||| || ||| |||||||    
T  55921146 ctttcgcaccggtttccgacccaccaaaggtgagcgattaatccggctcatacgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 55921047  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  | |||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  55921046 cccggtattccccgggtgcgtccttggaaggagctccttgccactggagcccaagcaacttggtt 55920982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 271
Target Start/End: Complemental strand, 33647832 - 33647669
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaac 207  Q
    |||| ||||||||| |||  ||||||||||   ||||||||| || ||||||||| | | ||| ||| ||| ||| ||||||||||| ||||||||||||    
T  33647832 tttcgcaccggtttccgatccaccaaagatgaacgactaatctggttcgtgcgtagaggaatgtgcactggtcaagcgttgttctccctggaaatcgaac 33647733  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     | | ||| |||  ||||||| ||| |||||| || |||||||| |||| ||| ||||||||||    
T  33647732 ccggtattccccagatacgtccttgaaaggagctccttgccactagagcccaagcaacttggtt 33647669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 260
Target Start/End: Original strand, 36262799 - 36262917
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||| |||||||||| | ||||| ||| ||||||| |||||||| ||||| |||||||| | | |||  |||  |||||| ||||||||||     
T  36262799 gcgactaatccgactcgtgcgtagaggcatgtgcactggccaagcgttgttc-cctgggaatcgaacccggtattctccgggtacgtccttggaaggagc 36262897  T
Q  241 tcattgccactggagctcaa 260  Q
    |  |||||||||||||||||    
T  36262898 ttcttgccactggagctcaa 36262917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 295566 - 295680
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    ||||||||| || ||||||||| | ||||||||| ||||||||||||||||  |||| |||||||    | ||| |||| ||||||| || ||||| |||    
T  295566 cgactaatctggttcgtgcgtagaggcatgcgcactggccaaacgttgttcctctgggaatcgaatctggtattccccggatacgtccttagaaggtgtt 295665  T
Q  242 cattgccactggagc 256  Q
    | |||||||||||||    
T  295666 ccttgccactggagc 295680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 20354715 - 20354601
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||| ||| |||||| | ||||||||| | ||||| ||||||||| |||||||||| ||||| | ||||  ||| | |||| ||||||||||     
T  20354715 cgactaatccgactcatgcgtagaggcatgcgcactagccaagcgttgttctccctggaaatcaaactcggtatttttcgagttcgtccttggaaggaga 20354616  T
Q  241 tcattgccactggag 255  Q
    || ||||||||||||    
T  20354615 tccttgccactggag 20354601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 141 - 209
Target Start/End: Original strand, 20532441 - 20532510
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactc 209  Q
    |||||| ||||||||| |||||| | ||||||||| ||||||| |||||||| |||||||||||||||||    
T  20532441 gcgacttatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctggaaatcgaactc 20532510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 109 - 256
Target Start/End: Original strand, 40780861 - 40781009
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaac 207  Q
    |||| ||||||||| |||| |||||||| |   ||||||||||||||| |||||| | ||||||||| || |||| |||||||| ||| || ||||||||    
T  40780861 tttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagcgttgttccccttgagaatcgaac 40780960  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagc 256  Q
     |   |||| ||||||||||| ||  ||| || || |||||||||||||    
T  40780961 ccgatattttccgaatacgtccttaaaagaagctccttgccactggagc 40781009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 236
Target Start/End: Original strand, 3159474 - 3159597
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    ||||||||| |||| |||||| | |  |||||||||| |||||||||||| | ||||||||| ||||||| ||||||| | ||||||| |||||| | |     
T  3159474 caccggtttccgacccaccaatggtgagcgactaatctggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaagtcgaacccggt 3159573  T
Q  213 atttcccgaatacgtctttggaag 236  Q
    |||  ||| ||||||| |||||||    
T  3159574 attctccggatacgtccttggaag 3159597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 12703577 - 12703708
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||||||||  |||||| |  ||| | || ||| ||| |||||||| | ||||||||||||||||| ||| | ||| |||||| || ||||||     
T  12703577 gcgactaatccggcttatgcgtagagacatacacactggtcaagcgttgttcccactggaaatcgaactcagtattcctcgagtacgtcctttgaaggat 12703676  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||||||||||||| ||| ||||||||||    
T  12703677 ctccttgccactggagcccaagcaacttggtt 12703708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 185
Target Start/End: Complemental strand, 14567353 - 14567274
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaac 185  Q
    ||||||| ||||| ||| |||| ||||||||    ||||||||||||||||||||||| | ||||||||| |||||||||    
T  14567353 ttctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 14567274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 255
Target Start/End: Complemental strand, 20128387 - 20128273
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||  ||||||||||||| ||||||||| ||||||| | ||||| | ||||  |||||||| ||| ||| |||| ||||||| |||||||||      
T  20128387 cgactaatctagctcgtgcgtaaaggcatgcgcactggccaagcattgttccccctgagaatcgaacccagtattccccggatacgtccttggaaggaac 20128288  T
Q  241 tcattgccactggag 255  Q
    || ||||| ||||||    
T  20128287 tccttgccgctggag 20128273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 38075507 - 38075381
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    |||| |||||| |||||| | ||||||||| ||||||| ||||||| | ||||  |||||||| | | |||  ||||||||||| |||||||||  || |    
T  38075507 taattcggctcatgcgtagaggcatgcgcactggccaagcgttgtttcccctgagaatcgaacccggtattctccgaatacgtccttggaaggaactcct 38075408  T
Q  245 tgccactggagctcaatcaacttggtt 271  Q
    |||| ||||||| ||| ||||||||||    
T  38075407 tgccgctggagcccaaacaacttggtt 38075381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 19651559 - 19651608
Alignment:
Q  222 atacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||| |||||||||| |||||||||||||||| ||| ||||||||||    
T  19651559 atacgtccttggaaggagctcattgccactggagcccaaacaacttggtt 19651608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 146 - 266
Target Start/End: Complemental strand, 20421847 - 20421727
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    ||||| ||||| |||||| | ||||||||| |||||||  ||||||| || |||||||||||| ||| ||| |||  ||||||||||| |||||| || |    
T  20421847 taatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcgaac-cagtattccccagatacgtctttgaaaggagctcct 20421749  T
Q  245 tgccactggagctcaatcaact 266  Q
    |||||||| ||| ||| |||||    
T  20421748 tgccactgaagcccaagcaact 20421727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 120 - 192
Target Start/End: Complemental strand, 8424654 - 8424582
Alignment:
Q  120 ttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    |||||||| ||||||||||  |||| ||||  ||||||||| || | ||||||||| ||||||||||||||||    
T  8424654 ttttcgacccaccaaagatgagcgattaatttggctcgtgcatagaggcatgcgcactggccaaacgttgttc 8424582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 8889134 - 8888970
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    |||| |||||||||| |||| |||||||| |   ||||||||||||||| |||||| |  |||||||| || ||||  |||||| | ||| | |||||||    
T  8889134 cttttacaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagagccatgcgcactgcccaagtgttgttccccctaggaatcgaa 8889035  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| || ||||||| || ||||| || |||| ||| ||||||||||    
T  8889034 cccggtattccccggatacgtccttagaaggagctccttgccgctagagcccaaacaacttggtt 8888970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 14124128 - 14124044
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| ||||||||| | || |||||| | |  ||||||||||||||||||| ||| | ||||||||| |||||||| |||||||    
T  14124128 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgtgtagaggcatgcgcactggccaaatgttgttc 14124044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 30317345 - 30317261
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    |||||||| |||||| |||| |||||||| |  ||||||||| ||||||||||||| | |||| || | ||||||| ||||||||    
T  30317345 ctttcacatcggtttccgacccaccaaaggtgggcgactaattcggctcgtgcgtagaggcattcgtactggccaagcgttgttc 30317261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 144 - 238
Target Start/End: Original strand, 48015108 - 48015203
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaagga 238  Q
    |||||||||||||||||||| | || |||||| ||||||| |||||||| | |||| |||||||| | | ||| | ||  ||||||||||||||||    
T  48015108 actaatccggctcgtgcgtagaggcttgcgcactggccaagcgttgttcccactgggaatcgaacccggtattcctcgggtacgtctttggaagga 48015203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 106 - 173
Target Start/End: Complemental strand, 54946363 - 54946296
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcg 173  Q
    ||||||||| ||||||| |||| |||||| |||  |||||||||||||||| |||||| | |||||||    
T  54946363 ttctttcacgccggtttccgacccaccaatgatgggcgactaatccggctcatgcgtagaggcatgcg 54946296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 141 - 195
Target Start/End: Complemental strand, 50486022 - 50485968
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc 195  Q
    ||||||||||||||||||||||| | |||||||   ||||||| |||||||||||    
T  50486022 gcgactaatccggctcgtgcgtagaggcatgcgttctggccaatcgttgttctcc 50485968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 234 - 271
Target Start/End: Complemental strand, 4736582 - 4736545
Alignment:
Q  234 aaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||| |||||||||||||||||||| ||||||||||    
T  4736582 aaggagctcattgccactggagctcaaacaacttggtt 4736545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 215 - 271
Target Start/End: Original strand, 38841472 - 38841528
Alignment:
Q  215 ttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||| |||||| ||||||| || |||||||||||| |||||||  |||||||||    
T  38841472 ttcccgagtacgtccttggaagaagctcattgccactgaagctcaagtaacttggtt 38841528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 61; Significance: 7e-26; HSPs: 22)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 14107357 - 14107521
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| ||  ||  |||||||||||||||| |||||| | ||||| ||| ||| ||| |||||||| |||||| |||||||    
T  14107357 ctttcgcaccggtttccgacccactaataatgggcgactaatccggctcatgcgtagaggcatgtgcactggtcaagcgttgttcctcctgggaatcgaa 14107456  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||||||||||||||||||||| || ||||||||||||| ||| ||||||||||    
T  14107457 cccggtattccccgaatacgtctttggaaggagctccttgccactggagcccaaacaacttggtt 14107521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 7e-26
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 21898759 - 21898595
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| |||| |   ||||||||||||||| |||||| | ||||||||| ||||||| |||||||| |||||| |||||||    
T  21898759 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 21898660  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  21898659 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 21898595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 2271336 - 2271464
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||||||||||||||| |  |||||||| |||| || |||||||||| ||  |||||||| | | ||| |||||||||||| |||||||||| |    
T  2271336 cgactaatccggctcgtgcgtagagacatgcgcactggctaagcgttgttctc-tgagaatcgaacccggtattccccgaatacgtccttggaaggagct 2271434  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||| ||| ||||||||||    
T  2271435 ccttgccactggagcccaagcaacttggtt 2271464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 29333172 - 29333301
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    ||||| || |||||| |||||| | ||||||||| |||||||||||||||| |||||||||||||| | | ||| || |  |||||| |||||||||| |    
T  29333172 cgactgattcggctcatgcgtagaggcatgcgcactggccaaacgttgttcccctggaaatcgaacccggtattccctgggtacgtccttggaaggagct 29333271  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    |||||||||| |||| ||| ||||||||||    
T  29333272 cattgccactagagcccaaacaacttggtt 29333301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 5253222 - 5253386
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  |||| ||||||||||| |||||| | ||||||||| |||||||  |||||| | ||||| |||||||    
T  5253222 ctttcgcaccggtttccgacccaccaaaggtgggcgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 5253321  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||||||| || |||||| |||||| ||| ||||||||||    
T  5253322 cccggtattccccgggtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 5253386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 8938824 - 8938658
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcg 204  Q
    ||||||| ||||||||| |||| || ||||| |   |||||||| |||||| |||||| |||| |||||| ||| |||  ||||||| |||||| |||||    
T  8938824 ttctttcgcaccggtttccgacccatcaaaggtggacgactaattcggctcatgcgtagatgcttgcgcactggtcaagtgttgttcctcctgggaatcg 8938725  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||  || ||| |||| ||| |||||||||||||| || ||| ||||||||| ||| ||||||||||    
T  8938724 aaccaagtattccccggatatgtctttggaaggagctccttgtcactggagcccaaacaacttggtt 8938658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 108 - 249
Target Start/End: Complemental strand, 12606541 - 12606399
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |  | |||||||| |  ||||||||||||||||||||||| | ||||||||| ||||||||||||||| | |||||||||||||    
T  12606541 ctttcgcaccggtttccagctcaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttccccctggaaatcgaa 12606442  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgcca 249  Q
        | ||| |||| ||||||  |||||||||| |||||||||    
T  12606441 tctggtattccccggatacgttcttggaaggagctcattgcca 12606399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 3601195 - 3601034
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |   |||||||||||||||||| ||| | ||||||||| ||||||| ||||||| | ||||  |||||||    
T  3601195 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgtgtataggcatgcgcactggccaagcgttgttccccctgagaatcgaa 3601096  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
      | | ||| ||||||||||| ||||||| ||| || |||||||| |||| ||| |||||||    
T  3601095 accggtattccccgaatacgtatttggaaagagctctttgccactagagcccaagcaacttg 3601034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 9633624 - 9633708
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| ||||||||| |||| |||||||| |  ||||||||||||||||||||||| | ||||||||| ||||||| ||||||||    
T  9633624 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttc 9633708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 114 - 206
Target Start/End: Complemental strand, 13391391 - 13391299
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaa 206  Q
    |||||||||||||| ||  ||| ||  ||||||||||||||||||||||| | ||||||||| ||||||||| |||||| |||| ||||||||    
T  13391391 caccggttttcgacccattaaatatgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaaacattgttcccctgaaaatcgaa 13391299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 30788852 - 30788936
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||||||||||||| || | ||||||||| ||||||||||||||||    
T  30788852 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcctagaggcatgcgcactggccaaacgttgttc 30788936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 13036037 - 13036164
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||| ||||| |||||| | ||||||||| |||||||  ||||||| || || ||||||||| |   ||| |||||||||||| ||||||||||     
T  13036037 cgactaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgaaaatcgaacccgatattccccgaatacgtccttggaaggagc 13036136  T
Q  241 tcattgccactggagctcaatcaacttg 268  Q
    || ||||||||||||| ||| |||||||    
T  13036137 tccttgccactggagcccaagcaacttg 13036164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 19230592 - 19230720
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||||||||||||||| | ||||||  | || |||| |||||||| | || |||||||| || |   ||||||| |||||| |||||||||| |    
T  19230592 cgactaatccggctcgtgcgtagaggcatgcatactgaccaagcgttgttcccttgaaaatcgaa-tccggtattcccgagtacgtccttggaaggagct 19230690  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||| ||| ||||||||||    
T  19230691 ccttgccactggagcccaaacaacttggtt 19230720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 119 - 271
Target Start/End: Original strand, 29444775 - 29444928
Alignment:
Q  119 gttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttc 217  Q
    |||| |||| ||||||||||   | ||||||||||||| |||||| | ||||||||| ||||||| ||||||| | ||| |||||||||| | | ||  |    
T  29444775 gtttccgacccaccaaagatggacaactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctagaaatcgaacccggtatccc 29444874  T
Q  218 ccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||  ||||||||||||||||| || |||||||| |||| |||  |||||||||    
T  29444875 ccgggtacgtctttggaaggagctccttgccactagagcccaagtaacttggtt 29444928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 8611973 - 8612137
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||  ||| |||||||| |  ||||||||||||| || |||||| | |||||| || ||| ||| ||||||| ||||| | |||||||    
T  8611973 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 8612072  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||||||| || ||||||||||||  ||| ||||||||||    
T  8612073 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 8612137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 272
Target Start/End: Complemental strand, 19089609 - 19089444
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| ||  |||||||||||||||||||||| | |||||| || |||||||  |||||| | ||||| |||| ||    
T  19089609 ctttcgcaccggtttccgacccaccaaaggtagacgactaatccggctcgtgcgtagaggcatgctcactggccaagtgttgttccccctgggaatcaaa 19089510  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttc 272  Q
    |   | ||| | || ||||||| ||| || ||| || |||| |||||||| ||| |||||||||||    
T  19089509 cctggtattcctcggatacgtccttgaaatgagctccttgcgactggagcccaagcaacttggttc 19089444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 5759623 - 5759575
Alignment:
Q  223 tacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||| ||||||||||||| ||||||||||||| ||| ||||||||||    
T  5759623 tacgtccttggaaggagttccttgccactggagcccaagcaacttggtt 5759575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 6606096 - 6606260
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   ||||||||||||||| |||||| | |||||  || |||||||  |||||| | ||||  |||||||    
T  6606096 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgtacactggccaagtgttgttccccctgagaatcgaa 6606195  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| |||||||||| || |||||||||  || ||| ||||||||||    
T  6606196 cccggtattccccggatacgtccttggaaggagctccttgccactgtggcccaagcaacttggtt 6606260  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 8932772 - 8932608
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| || ||||| |  | || ||||||||||| |||||| | ||||||||| | |||||  ||||||| || ||| |||||||    
T  8932772 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8932673  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| |||| |||| || |||||||||  || |||||||||||| |||| ||||||||||    
T  8932672 cccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8932608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 8944238 - 8944074
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| || ||||| |  | || ||||||||||| |||||| | ||||||||| | |||||  ||||||| || ||| |||||||    
T  8944238 ctttcgcaccggtttccgacccatcaaaggtgggtgattaatccggctcatgcgtagaggcatgcgcactagccaagtgttgttccccctgggaatcgaa 8944139  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| |||| |||| || |||||||||  || |||||||||||| |||| ||||||||||    
T  8944138 cccgatattccccggatacatccttggaaggaactccttgccactggagttcaaacaacttggtt 8944074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Complemental strand, 5029928 - 5029841
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc 195  Q
    ||||| |||| |||| |||| || |||||||  |||||||||||  ||| |||||| | ||||||||| || ||||||||||||||||    
T  5029928 ctttcgcaccagtttccgacccatcaaagatgggcgactaatccaactcatgcgtagaggcatgcgcactgaccaaacgttgttctcc 5029841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 12635925 - 12635793
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||||||   |  ||||||||||||||| ||||||| | ||||||||| | ||||| ||||| ||| ||||| |||| ||    
T  12635925 ctttcgcaccggtttccgacccaccaatagtgggcgactaatccggcttgtgcgtagaggcatgcgcactagccaagcgttgtttcccctgggaatcaaa 12635826  T
Q  207 ctcagcatttcccgaatacgtctttggaaggag 239  Q
    |   | ||| |||| ||||||| ||||||||||    
T  12635825 cctggtattccccggatacgtccttggaaggag 12635793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 59; Significance: 1e-24; HSPs: 42)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 5855596 - 5855466
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||| ||| |||||| | ||||||||| ||||||| |||||||| |||||| |||||||| | | ||| |||||||||||| ||||||||||     
T  5855596 cgactaatccgcctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaacccggtattccccgaatacgtccttggaaggagc 5855497  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  5855496 tccttgccactggagcccaaacaacttggtt 5855466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 10422896 - 10422732
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| ||||||||| ||||  ||||||| |   ||||||||||||||| |||||| | ||||||||| |||||||  ||||||| |||| |||||||||    
T  10422896 ctttcgcaccggtttccgacttaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttcctcctagaaatcgaa 10422797  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||||||||||| |||||||||| || ||||||||| ||| ||| ||||||||||    
T  10422796 cccggtattccccgaatacgtcattggaaggagctccttgccactgtagcccaaacaacttggtt 10422732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 14254302 - 14254416
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||||| ||||||| | ||||||| ||||||| | |||| ||||||||||| | ||| |||||||||||| |||||| ||||    
T  14254302 cgactaatccggctcatgcgtaaaggcatgcgtactggccaagcgttgttccccctgaaaatcgaactcggtattccccgaatacgtccttggaatgagt 14254401  T
Q  241 tcattgccactggag 255  Q
    || ||||| ||||||    
T  14254402 tccttgcccctggag 14254416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 118 - 271
Target Start/End: Original strand, 40288487 - 40288641
Alignment:
Q  118 ggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcattt 216  Q
    ||||| |||| |||||| |||  ||||||||||||||||||| ||| | ||||||  | ||||||| |||||||| || |||||||||||| | | |||     
T  40288487 ggtttccgacccaccaaggatgagcgactaatccggctcgtgtgtagaggcatgcatactggccaaccgttgttccccctggaaatcgaacccggtattc 40288586  T
Q  217 cccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||||||||| |||||| ||| || |||||||| |||| ||| ||||||||||    
T  40288587 cccgaatacgtccttggaaagagctccttgccactcgagcccaagcaacttggtt 40288641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 256
Target Start/End: Original strand, 9659179 - 9659327
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| ||||||||| | || |||||||| |   ||||||||||||||| |||||||| ||||||||| | | |||||||||||| ||||| ||||||||    
T  9659179 ctttcgcaccggtttccaacccaccaaaggtggacgactaatccggctcatgcgtaaaggcatgcgcactagtcaaacgttgttcccctgggaatcgaac 9659278  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagc 256  Q
     | | ||| ||||| |||||| || ||| ||| || |||||||||||||    
T  9659279 ccggtattccccgagtacgtccttagaatgagctccttgccactggagc 9659327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 17642004 - 17642168
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||| |||| |||| |||||||| |   |||||||||||||||||||||| | ||||||||| |||||||  |||||| | ||||| |||||||    
T  17642004 ctttcgcaccagtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 17642103  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | ||| |||||| |  ||||||  ||||||||| || ||| ||||||||| ||| ||||||||||    
T  17642104 cccagtatttcctgggtacgtccgtggaaggagctccttgtcactggagcccaaacaacttggtt 17642168  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 11397889 - 11398052
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| ||||| ||| |||| |||||||| |   ||||||||||| ||| |||||| | |||| |||| |||||||||||||||| ||| | ||||||||    
T  11397889 ctttcgcaccgatttccgacccaccaaaggtggacgactaatccgactcatgcgtagaggcatacgcattggccaaacgttgttcccctcggaatcgaac 11397988  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     | | |||  ||| |||| || |||||||||| || ||||||||||||| ||| ||||||||||    
T  11397989 ccggtattctccggatacatccttggaaggagctccttgccactggagcccaagcaacttggtt 11398052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 49078188 - 49078058
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| |||||||  |||||| | ||||| |||||||| | | ||| |||| ||||||| || |||||||     
T  49078188 cgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgtttcccctgggaatcgaacccggtattccccggatacgtccttagaaggagc 49078089  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  49078088 tccttgccactggagcccaagcaacttggtt 49078058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 26660245 - 26660082
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||||||||| |||||| | ||||||| | ||  |||| ||||||| || |||||||||||    
T  26660245 ctttcgcaccggtttccgacccaccaaaggtg-gcgactaatccggctcatgcgtagaggcatgcgtactgatcaaatgttgttccccgtggaaatcgaa 26660147  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||||||||||| || |||| |  || ||||||||||||| ||| ||||||||||    
T  26660146 cccggtattccccgaatacgtcattcgaagaaactctttgccactggagcccaagcaacttggtt 26660082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 267
Target Start/End: Original strand, 32150922 - 32151082
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| || ||||||||||| || ||||| |  ||||||||| |||||| |||||||| ||||||||| || ||||| |||||| | |||||||||||||    
T  32150922 ctttcgcatcggttttcgacccatcaaaggtgagcgactaattcggctcatgcgtaaaggcatgcgcactgaccaaatgttgttccccctggaaatcgaa 32151021  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    |     ||| | |||| ||||| |||||||||| || ||||||||||||| ||| ||||||    
T  32151022 cctgatattcctcgaaaacgtccttggaaggagctccttgccactggagcccaaacaactt 32151082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 267
Target Start/End: Original strand, 43959821 - 43959981
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||  ||| |||| |  ||||||||||||||||||||||| | ||||||||| ||||||| ||||||| | ||||| ||| |||    
T  43959821 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctgggaattgaa 43959920  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    | |   ||| ||||  |||||| ||||||||||  | ||||||||||||| ||||||||||    
T  43959921 cccgatattccccgggtacgtcattggaaggagcaccttgccactggagcccaatcaactt 43959981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 2980965 - 2981095
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||| |||||||||| | |||||| || |||||||  ||||||| | |||| |||||||| ||| ||| |||| |||||||  |||||||||     
T  2980965 cgactaatccgactcgtgcgtagaggcatgcacactggccaagtgttgttcccgctgggaatcgaacccagtattccccggatacgtccctggaaggagc 2981064  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || |||||||| |||| ||| ||||||||||    
T  2981065 tccttgccactagagcccaagcaacttggtt 2981095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 17092511 - 17092641
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||||||||| | |||| | || ||||||| ||||| ||| |||| |||||||||||   ||||||||||||||||  || ||||||     
T  17092511 cgactaatccggctcgtgcgtagaggcatacacactggccaatcgttgtttcccctgaaaatcgaactcgatatttcccgaatacgtccatgaaaggagc 17092610  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    |  |||||||| ||| |||| ||||||||||    
T  17092611 ttcttgccactagagttcaagcaacttggtt 17092641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 50371832 - 50371934
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcg 204  Q
    ||||||| ||||||||| |||  ||||||||||  ||||||||||||||| ||||||| | ||||||| | ||||||| |||||||| ||||| ||||||    
T  50371832 ttctttcgcaccggtttccgatccaccaaagatgggcgactaatccggcttgtgcgtagaagcatgcgtactggccaagcgttgttcttcctgaaaatcg 50371931  T
Q  205 aac 207  Q
    |||    
T  50371932 aac 50371934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 264
Target Start/End: Complemental strand, 16956574 - 16956417
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||| ||||| |||| |||||||| |  | ||||||||||||||||||||| | ||||||||| ||| ||||||||||| | ||||  || ||||    
T  16956574 ctttcgcactggtttccgacccaccaaaggtgagtgactaatccggctcgtgcgtagaggcatgcgcactggtcaaacgttgttacccctgagaaccgaa 16956475  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaa 264  Q
    | | | ||| ||||  |||||| |||||||||| || |||||| || |||||||||||    
T  16956474 cacggtattccccgggtacgtccttggaaggagctccttgccattgaagctcaatcaa 16956417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 276
Target Start/End: Complemental strand, 18915975 - 18915806
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| | || |||||| | |  ||||||||||||||||||||||| | |||||| || |||||||  |||||| | ||||| |||||||    
T  18915975 ctttcgcaccggtttccaacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 18915876  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttcatat 276  Q
    | | | ||| ||||  |||||| ||||||| || || ||||||||| ||| ||| |||||||||| ||||    
T  18915875 cccggtattccccgggtacgtccttggaagaagctccttgccactgaagcccaaacaacttggttaatat 18915806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 46929772 - 46929901
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    ||||||||||||||| || ||  | ||||||||| ||||||| |||||||||  ||||||||||||||   |||  ||  |||||||||||||||||| |    
T  46929772 cgactaatccggctcatgtgtggaggcatgcgcattggccaagcgttgttcttttggaaatcgaactcgatattctccagatacgtctttggaaggagct 46929871  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
      |||||||| |||| ||| ||||||||||    
T  46929872 tcttgccactagagcccaagcaacttggtt 46929901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 143 - 271
Target Start/End: Original strand, 48798105 - 48798234
Alignment:
Q  143 gactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||||||| |||||| | ||||||||| | | ||| |||||||| || |||||||||||| |   ||| |||| ||||||| |||||||||| |    
T  48798105 gactaatccggctcatgcgtagaggcatgcgcactagtcaagcgttgttccccctggaaatcgaacccgatattccccggatacgtcattggaaggagct 48798204  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||| | | ||||||||||    
T  48798205 ccttgccactggagccccaacaacttggtt 48798234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 8764099 - 8763935
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   |||||||||||||||||||||| | ||||||||| |||||||  |||||| | ||||| || ||||    
T  8764099 ctttcgcaccggtttccgacccaccaacggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaaacgaa 8764000  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| ||||  |||||| |||||||||| || ||||||| ||||| ||| ||||||||||    
T  8763999 cccgatattccccgggtacgtccttggaaggagctccttgccacgggagcccaagcaacttggtt 8763935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 115 - 207
Target Start/End: Original strand, 21849212 - 21849304
Alignment:
Q  115 accggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||||||||||| ||||||   |  ||||||||||||||||||||||| | ||||||||| | ||||| |||||||| ||||| ||||||||    
T  21849212 accggttttcgacccaccaatagtgagcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttcccctgggaatcgaac 21849304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 33004015 - 33004179
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| |||||||||||||| |||||  | |  | ||||||||||||||||||||| | ||||||||| ||||||| | ||| ||| |||||||||||||    
T  33004015 ctttcgcaccggttttcgacccaccattggtgggtgactaatccggctcgtgcgtagaggcatgcgcactggccaagcattgtttcccctggaaatcgaa 33004114  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
      |   ||| |||| ||||||| |||||||||| || |   ||||||||| ||| ||||||||||    
T  33004115 tccgatattccccggatacgtccttggaaggagctcctcatcactggagcccaagcaacttggtt 33004179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 270
Target Start/End: Original strand, 41663856 - 41664019
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   |||||||||| |||| |||||| | ||||||||| || ||||  ||||||| || ||| |||||||    
T  41663856 ctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaa 41663955  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggt 270  Q
    | | | ||| |||| ||||||| || ||||||| || ||||||||||||| ||| |||||||||    
T  41663956 cccggtattccccggatacgtccttagaaggagctccttgccactggagcccaaacaacttggt 41664019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 255
Target Start/End: Original strand, 30927761 - 30927875
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | |||||| || ||||||| |||||||| | ||||||||||||| |   |||||||   |||||| ||||||||||     
T  30927761 cgactaatccggctcatgcgtagaggcatgcacattggccaagcgttgttccctctggaaatcgaacccgatatttcccaggtacgtccttggaaggagc 30927860  T
Q  241 tcattgccactggag 255  Q
    || ||||||||||||    
T  30927861 tccttgccactggag 30927875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 33418149 - 33418279
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||||||| || | ||||||||| ||||||| |||||| | || | | |||||||  | | |||  |||  |||||||||||||||||     
T  33418149 cgactaatccggctcgtgcatagaggcatgcgcactggccaagcgttgtcccccctaggaatcgaatccggtattctccgggtacgtctttggaaggagc 33418248  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  33418249 tccttgccactggagcccaaacaacttggtt 33418279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 268
Target Start/End: Original strand, 47312933 - 47313059
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    ||||||||| ||||| |||||| | |||| |||| |||||||||||||||| ||| | |||| ||| | | ||| |||  ||||||| |||||||||  |    
T  47312933 cgactaatctggctcatgcgtagaggcatacgcactggccaaacgttgttcccctaggaatcaaacccggtattccccagatacgtccttggaaggatct 47313032  T
Q  242 cattgccactggagctcaatcaacttg 268  Q
    | ||||||||||||| ||| |||||||    
T  47313033 cgttgccactggagcccaaacaacttg 47313059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 268
Target Start/End: Complemental strand, 2567386 - 2567223
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaa-tcg 204  Q
    |||||||  |||||||| |||| ||||||||||   || |||||| | |||||| ||| | ||||||||| ||||||| ||||||| |||  |||| |||    
T  2567386 ttctttcgtaccggtttccgacccaccaaagatggacggctaatctgactcgtgagtagaggcatgcgcactggccaagcgttgttttccccgaaaatcg 2567287  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    ||| | | |||  ||||||||||| |||||||||| || |||||| || ||| ||| |||||||    
T  2567286 aacccggtattctccgaatacgtccttggaaggagctccttgccagtgaagcccaaacaacttg 2567223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 117 - 271
Target Start/End: Complemental strand, 15466064 - 15465909
Alignment:
Q  117 cggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatt 215  Q
    |||||| |||| |||||||| |  ||||| |||| | |||||||||| | ||||| ||| || |||| |||||||| || ||||||||||||   | |||    
T  15466064 cggtttccgacccaccaaaggtgagcgaccaatcagactcgtgcgtagaggcatgtgcactgaccaagcgttgttccccctggaaatcgaacctggtatt 15465965  T
Q  216 tcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     ||| |||||||| ||||||||||  | ||| ||||||||| ||| ||||||||||    
T  15465964 ccccaaatacgtccttggaaggagccctttgtcactggagcccaaacaacttggtt 15465909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 44969772 - 44969673
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||||||||||||| |||  |||||| |||   ||||||||||||||| ||||||   |||||| || ||||||| |||||||||||||  ||||||||    
T  44969772 ctttcacaccggtttccgatccaccaatgatggacgactaatccggctcatgcgtaggggcatgcacactggccaagcgttgttctcctgagaatcgaac 44969673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 108 - 190
Target Start/End: Complemental strand, 37339928 - 37339846
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgt 190  Q
    ||||| ||||||||| | || |||||||| |  ||||||||||||||||||||||  | ||||||||| ||||||| ||||||    
T  37339928 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgttgaggcatgcgcactggccaagcgttgt 37339846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 10172971 - 10173056
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct 193  Q
    ||||| ||||||||| |||| |||||||| |  |||| ||||||||||| |||||| | ||||| ||| ||||||| |||||||||    
T  10172971 ctttcgcaccggtttccgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgggcactggccaagcgttgttct 10173056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 146 - 254
Target Start/End: Complemental strand, 10336586 - 10336477
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    ||||||||||| |||||| | ||||||||| ||| ||| |||||||| || || ||||||||| |   |||  ||| |||||||||||||||||| || |    
T  10336586 taatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgaaaatcgaacccgatattctccggatacgtctttggaaggagctcct 10336487  T
Q  245 tgccactgga 254  Q
    ||||||||||    
T  10336486 tgccactgga 10336477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 26325920 - 26325756
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   ||||||||||||||| |||||| | ||||||||| || ||||  ||||||| | |||| |||||||    
T  26325920 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttcccgctgggaatcgaa 26325821  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| | || ||||||| ||| |||||| || ||||||||||||| | | ||||||||||    
T  26325820 cccgatattcctcggatacgtccttgaaaggagctccttgccactggagccctagcaacttggtt 26325756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 183
Target Start/End: Original strand, 4581682 - 4581757
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaa 183  Q
    ||||| ||||||||| |||| |||||||| |   |||||| ||||||||||||||| | ||||||||| |||||||    
T  4581682 ctttcgcaccggtttccgacccaccaaaggtggacgactattccggctcgtgcgtagaggcatgcgcactggccaa 4581757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 267
Target Start/End: Complemental strand, 32945 - 32819
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||| |||||| |||||| | ||||| ||| || |||| |||||||| |||||| ||||| || |   ||| |||   |||||| ||||||||||     
T  32945 cgactaattcggctcatgcgtagaggcatgtgcactgaccaagcgttgttcctcctgggaatcggacccgatattcccccggtacgtccttggaaggagc 32846  T
Q  241 tcattgccactggagctcaatcaactt 267  Q
    |||||||||||||||| ||| ||||||    
T  32845 tcattgccactggagcccaaacaactt 32819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 13262157 - 13262091
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaac 207  Q
    ||||||||||| |||||||||| |  |||||| | || |||||||||||||| ||||||||||||||    
T  13262157 cgactaatccgactcgtgcgtagagacatgcgtattgaccaaacgttgttctccctggaaatcgaac 13262091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 106 - 267
Target Start/End: Complemental strand, 14357865 - 14357703
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcg 204  Q
    ||||||| ||||||||| |||| || ||| | ||  ||| |||||||| ||||||||| | ||||||||| ||| ||||||||| |||   |||||||||    
T  14357865 ttctttcgcaccggtttccgacccatcaatggtaaacgattaatccggttcgtgcgtagaggcatgcgcactggtcaaacgttgtttcaattggaaatcg 14357766  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    |||     |||| ||  ||||||| ||||||| |  || ||||||||||||||||| ||||||    
T  14357765 aacctgatattttccagatacgtccttggaagaaactccttgccactggagctcaagcaactt 14357703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 147 - 271
Target Start/End: Complemental strand, 34878059 - 34877934
Alignment:
Q  147 aatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcatt 245  Q
    |||| |||||||| ||| | ||||||||| |||||||  |||||||  ||| | ||||||||   | ||| |||||||||||| |||||||| | || ||    
T  34878059 aatctggctcgtgtgtagaggcatgcgcactggccaagtgttgttccgcctaggaatcgaacctggtattccccgaatacgtccttggaaggtgctcctt 34877960  T
Q  246 gccactggagctcaatcaacttggtt 271  Q
    ||||||| ||| ||| ||||||||||    
T  34877959 gccactgaagcccaaacaacttggtt 34877934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 252
Target Start/End: Original strand, 45361882 - 45362027
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| |||| |   ||||||||||||||  ||||||   ||||||||| ||||||| ||||||| ||||||  |||||||    
T  45361882 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggcttatgcgtagtggcatgcgcactggccaagcgttgttcctcctgagaatcgaa 45361981  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactg 252  Q
    | | | ||| || |  |||||| |||||||||| || |||||||||    
T  45361982 cccggtattcccagggtacgtccttggaaggagctccttgccactg 45362027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 251
Target Start/End: Original strand, 17358507 - 17358615
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttc 242  Q
    ||||||| ||||| |||||||| ||||||||| ||| ||| ||||||||| ||||  |||||||| | | ||| ||| |||||||| ||| || ||| ||    
T  17358507 actaatcgggctcatgcgtaaaggcatgcgcattggtcaagcgttgttctccctgagaatcgaacccggtattccccaaatacgtccttgaaatgagctc 17358606  T
Q  243 attgccact 251  Q
     ||||||||    
T  17358607 cttgccact 17358615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 192
Target Start/End: Complemental strand, 28417018 - 28416970
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||| || ||||||||| ||||||||||  ||||||||||||||||    
T  28417018 actaatcgggttcgtgcgtagatgcatgcgccctggccaaacgttgttc 28416970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 114 - 273
Target Start/End: Original strand, 31576553 - 31576713
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    ||||||||| ||||||| |||||||   ||||||| ||||||| |||||| | |||  |||| ||||||| | ||||| | ||||  |||||||| | |     
T  31576553 caccggtttccgacacatcaaagatggacgactaagccggctcatgcgtagaggcacacgcattggccaagcattgtttcccctgagaatcgaacccggt 31576652  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttca 273  Q
    |||| | | ||||||| || ||| ||| || |||||||| |||| ||| ||||||||||||    
T  31576653 attttcgggatacgtccttagaatgagctccttgccactagagcccaaacaacttggttca 31576713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 219 - 271
Target Start/End: Original strand, 40226354 - 40226406
Alignment:
Q  219 cgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||||||| |||||||||| || ||||||||| | | ||||||||||||||    
T  40226354 cgaatacgtccttggaaggagctccttgccactgaaacccaatcaacttggtt 40226406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 57; Significance: 2e-23; HSPs: 45)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 145 - 276
Target Start/End: Original strand, 4195238 - 4195370
Alignment:
Q  145 ctaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttca 243  Q
    |||||||||||| |||||| | ||||||||| | |||||| ||||||| ||||||||||||||||| | ||| |||| ||||||| |||| ||||| ||     
T  4195238 ctaatccggctcatgcgtagaggcatgcgcactagccaaatgttgttcctcctggaaatcgaactcggtattccccggatacgtccttggcaggagctcc 4195337  T
Q  244 ttgccactggagctcaatcaacttggttcatat 276  Q
    ||||||||||||| ||| |||||||||| ||||    
T  4195338 ttgccactggagcccaagcaacttggttgatat 4195370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 108 - 269
Target Start/End: Complemental strand, 34659336 - 34659174
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaa 206  Q
    ||||| ||||||||||||||||||||| | |  ||||||||||||||||||||||| | ||||||||| ||| ||| |||||||| ||| || |||||||    
T  34659336 ctttcgcaccggttttcgacacaccaatggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggtcaagcgttgttccccttgagaatcgaa 34659237  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttgg 269  Q
    | | | ||| ||||  ||| ||  ||||||||| || ||||||||||||| ||| ||||||||    
T  34659236 cccggtattccccgggtacatccctggaaggagctccttgccactggagcccaaacaacttgg 34659174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 48804793 - 48804629
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcct-ggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   ||||||||||||||| |||||| | ||||||||| |||||||  ||||||| ||| || |||||||    
T  48804793 ctttcgcaccggtttccgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccttgggaatcgaa 48804694  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  48804693 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 48804629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 114 - 271
Target Start/End: Original strand, 5039423 - 5039581
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagc 212  Q
    |||||||||||||  |||||||| |  |||||||||||||||| |||||| | | ||| ||| || ||||  ||||||| |||| | |||||||||| |     
T  5039423 caccggttttcgatccaccaaaggtgagcgactaatccggctcatgcgtagaggtatgtgcactgaccaagtgttgttcctcctaggaatcgaactcggt 5039522  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| ||||||||| ||| ||||||||| || ||||||||||||| ||| ||||||||||    
T  5039523 attccccgaatacatctatggaaggagctccttgccactggagcccaaacaacttggtt 5039581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 43346778 - 43346942
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaa 206  Q
    ||||| ||| ||||| |||| ||||||||||  |||||||||||||||||| |||| | |||||||||  ||||||  ||||||| ||| || ||| |||    
T  43346778 ctttcgcactggtttccgacccaccaaagatgagcgactaatccggctcgtacgtagaggcatgcgcaccggccaagtgttgttccccttgagaattgaa 43346877  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||  |||||||||||||||||| || ||||||||||||  ||| ||||||||||    
T  43346878 cccggtattccccagatacgtctttggaaggagctccttgccactggagtccaaacaacttggtt 43346942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 43861971 - 43862135
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||  |||||||| |    |||||||||||||| |||||| | ||||||||| ||||||||||||||| | ||||| |||||||    
T  43861971 ctttcgcaccggttttcgatccaccaaaggtgaatgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgggaatcgaa 43862070  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||  |||||||||||||| ||| || ||||| || |||| ||| ||||||||||    
T  43862071 cccggtattccccagatacgtctttggaaagagctccttgccgctagagcccaaacaacttggtt 43862135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 114 - 268
Target Start/End: Complemental strand, 1797564 - 1797409
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaactcagc 212  Q
    |||||||||||||  || |||||||   |||||| ||||||||||||||| |  |||||||| ||||||| ||||| ||| ||||| |||||||| | |     
T  1797564 caccggttttcgatccatcaaagatggacgactagtccggctcgtgcgtagagacatgcgcactggccaagcgttgtttcccctgggaatcgaacccggt 1797465  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    ||| | || ||||||| |||||||||| || ||||||||||||| ||| |||||||    
T  1797464 attcctcggatacgtccttggaaggagctccttgccactggagcccaagcaacttg 1797409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 16802227 - 16802069
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    |||| ||||||||| |||||| | |  ||||||||||||||||||||||| | |||| |||| ||||||| ||||||| |||||   |||||||  | |     
T  16802227 caccagttttcgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatacgcactggccaatcgttgttcctcctaagaatcgaatccggt 16802128  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| ||||  |||||| |||||||||| |||||||||||||||| ||  ||||||||||    
T  16802127 attccccgggtacgtccttggaaggagctcattgccactggagcccaggcaacttggtt 16802069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 17748415 - 17748545
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||||| |||| | ||||||||| ||||||| ||||||| | ||||| |||||||| | | ||| |||||||||||| ||||||| ||     
T  17748415 cgactaatccggctcgtacgtagaggcatgcgcactggccaagcgttgttccccctgggaatcgaacccggtattccccgaatacgtccttggaagaagc 17748514  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    |  |||||||| |||| ||| ||||||||||    
T  17748515 tgcttgccactagagcccaaacaacttggtt 17748545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 5069814 - 5069975
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| || |||||| |||| |||||||| |  ||||||||||||||| ||||||| | |||||| || | || || |||||||| ||||||||||||||    
T  5069814 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggcttgtgcgtagaggcatgcacactagctaagcgttgttcctcctggaaatcgaa 5069913  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    | | | ||||||||  |||||| || |||| || || ||||||||||||| ||| |||||||    
T  5069914 cccggtatttcccgggtacgtccttagaagaagctccttgccactggagcccaaacaacttg 5069975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 22993366 - 22993530
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||  ||| |||||||| |  ||||||||||||| ||||||||| | |||||| || ||||||| ||||||| ||||| | |||||||    
T  22993366 ctttcgcaccggtttctgacccaccaaaggtgagcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaa 22993465  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| ||||  |||||| |||||||||| || ||||||||||||  ||| ||||||||||    
T  22993466 cccgatattccccgggtacgtccttggaaggagctccttgccactggagtccaagcaacttggtt 22993530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 4228786 - 4228914
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||| ||||||   ||||| ||| ||||||||||||||  |||||||||||||||   | ||| | || ||||||| ||||||||||     
T  4228786 gcgactaatccggctcatgcgtaggggcatgtgcactggccaaacgttgt--tcctggaaatcgaacctggtattcctcggatacgtccttggaaggagc 4228883  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||| ||||||| ||| ||||||||||    
T  4228884 tccttgccgctggagcccaaacaacttggtt 4228914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 13095962 - 13095804
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    ||||||||| |||| |||||||| |  |||||||||||||||| |||||| | ||||||||| |||||||  |||||| | ||||| ||| |||| | |     
T  13095962 caccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatagaacccggt 13095863  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| ||||  |||||| ||| |||||| || ||||||| ||||| ||| ||||||||||    
T  13095862 attccccgggtacgtccttgaaaggagctccttgccacgggagcccaagcaacttggtt 13095804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 106 - 192
Target Start/End: Original strand, 38578864 - 38578950
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||| ||||||||| |||| |||||||| |  |||||||||||||||| |||||| | ||||||||| ||||||| ||||||||    
T  38578864 ttctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 38578950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 47341952 - 47341822
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||| ||||| ||||||||||| | ||||||||| |||||||  ||||||| || ||| |||||||||| | ||| ||||  |||||| |||||| |||     
T  47341952 cgaccaatcctgctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaactcggtattccccgggtacgtccttggaatgagc 47341853  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  47341852 tccttgccactggagcccaagcaacttggtt 47341822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 22573924 - 22573759
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcga 205  Q
    ||||||| ||||||||||| || || ||| |||   ||| ||||||||||| |||||||| ||||||||| ||| |||| ||||||| |||| |||||||    
T  22573924 ttctttcgcaccggttttcaacccatcaatgatggacgattaatccggctcatgcgtaaaggcatgcgcactggtcaaatgttgttcccctgaaaatcga 22573825  T
Q  206 actcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    || |   ||| ||| ||||  |||||||||| || |  |||| |||||||| ||| ||||||||||    
T  22573824 acccgatattcccccaatatatctttggaagaagcttcttgctactggagcccaagcaacttggtt 22573759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 10047875 - 10048039
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   |||||||| | |||| |||||| | || |||||| |||||||  ||||||| || ||| |||||||    
T  10047875 ctttcgcaccggtttccgacccaccaatggtggacgactaattctgctcatgcgtagaggcctgcgcactggccaagtgttgttccccctgggaatcgaa 10047974  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| |||||||||| || |||||||||||| |||| ||||||||||    
T  10047975 cccggtattccccggatacgtccttggaaggagctccttgccactggagttcaagcaacttggtt 10048039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 146 - 255
Target Start/End: Original strand, 42210299 - 42210409
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    |||||||||||||||||| | ||||||||| ||||||||||||||| || |||| |||||||  | | ||| | || ||||||| |||||| ||| || |    
T  42210299 taatccggctcgtgcgtagaggcatgcgcactggccaaacgttgttttcactgggaatcgaagccggtattcctcggatacgtccttggaaagagctcct 42210398  T
Q  245 tgccactggag 255  Q
    |||||||||||    
T  42210399 tgccactggag 42210409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 144 - 271
Target Start/End: Complemental strand, 43925586 - 43925458
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttc 242  Q
    |||||||| |||| |||||| | ||||||||| || ||||  ||||||| || ||| |||||||| | | ||| ||||  |||||| |||||||||| ||    
T  43925586 actaatccagctcatgcgtagaggcatgcgcactgaccaagtgttgttccccctgggaatcgaacccggtattccccgggtacgtccttggaaggagctc 43925487  T
Q  243 attgccactggagctcaatcaacttggtt 271  Q
     ||||||||||||| ||| ||||||||||    
T  43925486 cttgccactggagcccaagcaacttggtt 43925458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 217 - 268
Target Start/End: Complemental strand, 11607131 - 11607080
Alignment:
Q  217 cccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    |||||||||||| ||||||||||||| ||||||||||||| ||| |||||||    
T  11607131 cccgaatacgtccttggaaggagttccttgccactggagcccaagcaacttg 11607080  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 26423288 - 26423450
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaac 207  Q
    |||| ||||||||| |||| |||||||| |   ||||||||| |||||||||||| | ||| | ||| ||||||| ||||||| | ||||| ||||||||    
T  26423288 tttcgcaccggtttccgac-caccaaaggtgaacgactaatctggctcgtgcgtagaggcaggtgcactggccaagcgttgtttcccctgggaatcgaac 26423386  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     | | ||| |  |  |||||| ||||||||||||  ||||||||||||| ||| ||||||||||    
T  26423387 ccggtattccttgggtacgtccttggaaggagtttcttgccactggagcccaaacaacttggtt 26423450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 207
Target Start/End: Complemental strand, 27028392 - 27028289
Alignment:
Q  105 cttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatc 203  Q
    |||||||| ||||||||| |||| |||||||| |  ||||||||||| |||| || ||| | ||||||||| |||||||  |||||| | ||||||||||    
T  27028392 cttctttcgcaccggtttccgacccaccaaaggtgagcgactaatccagctcatgtgtagaggcatgcgcactggccaagtgttgttccccctggaaatc 27028293  T
Q  204 gaac 207  Q
    ||||    
T  27028292 gaac 27028289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 19914735 - 19914865
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||| ||||| ||||| |||||| | ||||||||| ||||||| ||||||||   ||| |||||||| ||| ||| |     |||||| ||||||||||     
T  19914735 gcgattaatctggctcatgcgtagaggcatgcgcattggccaagcgttgttcctttgggaatcgaacccagtattccttaggtacgtccttggaaggagc 19914834  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  19914835 tccttgccactggagcccaagcaacttggtt 19914865  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 175 - 252
Target Start/End: Original strand, 45853586 - 45853664
Alignment:
Q  175 aatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactg 252  Q
    ||||||||| |||||||  | ||||||||||||||| |||||  || |||||||| ||||||||||||| |||||||||    
T  45853586 aatggccaatcgttgtttccactggaaatcgaactcggcattctccaaatacgtccttggaaggagttccttgccactg 45853664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 191
Target Start/End: Complemental strand, 3353500 - 3353451
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt 191  Q
    |||||||||||||||||||||| | ||||||||| |||||||| ||||||    
T  3353500 cgactaatccggctcgtgcgtagaggcatgcgcactggccaaatgttgtt 3353451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 115 - 271
Target Start/End: Complemental strand, 21530851 - 21530694
Alignment:
Q  115 accggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagca 213  Q
    |||||||| |||| |||||||| |  |||| |||| ||||||||||||| | ||||| ||| || ||||  ||||||| || ||| |||| ||| ||| |    
T  21530851 accggtttccgacccaccaaaggtgagcgattaattcggctcgtgcgtagaggcatgtgcactgaccaagtgttgttccccctgggaatcaaacccagta 21530752  T
Q  214 tttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    || |||   |||||| |||||||||| || |||||||||||||  || ||||||||||    
T  21530751 ttccccaggtacgtccttggaaggagctccttgccactggagccgaagcaacttggtt 21530694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 4705983 - 4706067
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    |||||||| ||||||||||   ||||||| |   |||||||||| ||||||||||| | ||||||| |||||| |||||||||||    
T  4705983 ctttcacatcggttttcgatctaccaaaggtggacgactaatccagctcgtgcgtagaagcatgcgtaatggctaaacgttgttc 4706067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 256
Target Start/End: Complemental strand, 14535368 - 14535252
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||||| ||||||||||| | |||||| || |||||||  |||||||||| || ||||  ||| | | ||| || || |||||| ||||||||||    
T  14535368 gcgactaatccagctcgtgcgtagaggcatgcacactggccaagtgttgttctccctgaaaatgaaacccggtattcccggagtacgtccttggaaggag 14535269  T
Q  240 ttcattgccactggagc 256  Q
    ||| |||||| ||||||    
T  14535268 ttctttgccattggagc 14535252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 14650427 - 14650263
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||||| || |||||||| |  |||||||| ||||||| |||||| | ||||  ||| ||| ||| | ||||| |||||||||||||||    
T  14650427 ctttcgcaccggttttcaacccaccaaaggtgagcgactaacccggctcatgcgtagaggcatatgcactggtcaagcattgttcctcctggaaatcgaa 14650328  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   |||  |||  |||||| |||||||||| || |||||||| |||  ||| ||||||||||    
T  14650327 cccgatattctccgggtacgtccttggaaggagctccttgccactagagtccaaacaacttggtt 14650263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 239
Target Start/End: Original strand, 21190779 - 21190911
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| |||||||||||||| |||||  |||  |||||||||| | |||||||||| | ||||||||| | ||||| ||||| | ||||| | |||||||    
T  21190779 ctttcgcaccggttttcgacccaccattgatgggcgactaatctgactcgtgcgtagaggcatgcgcactagccaagcgttgctcctcctaggaatcgaa 21190878  T
Q  207 ctcagcatttcccgaatacgtctttggaaggag 239  Q
    | | | ||| |||| ||| ||| ||||||||||    
T  21190879 cccggtattccccggataagtccttggaaggag 21190911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 22268088 - 22268192
Alignment:
Q  168 catgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaact 266  Q
    |||||||| |||||||| ||||||| || ||| |||||||| | | ||| ||| | |||||| |||||| ||| || ||||||||||||| ||| |||||    
T  22268088 catgcgcactggccaaatgttgttccccctgggaatcgaacccggtattccccaagtacgtccttggaatgagctccttgccactggagcccaaacaact 22268187  T
Q  267 tggtt 271  Q
    |||||    
T  22268188 tggtt 22268192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 129 - 208
Target Start/End: Complemental strand, 23658268 - 23658188
Alignment:
Q  129 caccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaact 208  Q
    ||||||||||   |||||||||||||||||| ||| | |||||| || ||||||| ||||||| | |||||||||||||||    
T  23658268 caccaaagatggacgactaatccggctcgtgtgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaact 23658188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 28396166 - 28396226
Alignment:
Q  115 accggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgca 175  Q
    |||||||| |||| |||||||| ||  ||||||||||||||| |||||||| |||||||||    
T  28396166 accggtttccgacccaccaaaggtagacgactaatccggctcatgcgtaaaggcatgcgca 28396226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 251
Target Start/End: Original strand, 36619253 - 36619397
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||||||| |||||| ||| |||||| | |   ||||||||||||||| |||||| | |||||| || ||| |||  |||||| | ||||| |||||||    
T  36619253 ctttcacactggtttttgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcacactggacaagtgttgttccccctgggaatcgaa 36619352  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccact 251  Q
    | | | ||| ||| |||||||| ||| ||||||||| ||||||||    
T  36619353 cccggtattccccaaatacgtccttgcaaggagttccttgccact 36619397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 37515031 - 37514899
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaa 206  Q
    ||||||||||||||| |||| ||| || | |   ||| |||||||||||||||||| |  |||||||| || ||||||||||||| | ||| ||||||||    
T  37515031 ctttcacaccggtttccgacccactaatggtgaacgattaatccggctcgtgcgtagagacatgcgcactgaccaaacgttgttcccactgaaaatcgaa 37514932  T
Q  207 ctcagcatttcccgaatacgtctttggaaggag 239  Q
    | ||| ||| ||||  || ||| ||||||||||    
T  37514931 cccagtattccccgggtatgtccttggaaggag 37514899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 188
Target Start/End: Complemental strand, 41945583 - 41945503
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgtt 188  Q
    ||||| ||||| ||| |||| |||||||| |   |||||||||||||||||||||| | ||||||||| ||||||| ||||    
T  41945583 ctttcgcaccgatttccgactcaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgtt 41945503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 45960035 - 45960165
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcct-ggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||||||||  |||||| | ||||||||| || ||||  ||||||  ||| || |||| ||||| | ||| ||||| |||||| |||||| |||    
T  45960035 gcgactaatccggcttatgcgtagaggcatgcgcactgaccaagtgttgttgcccttgggaatcaaactcggtattccccga-tacgtccttggaaagag 45960133  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || |||| |||||||||||| ||||||||||    
T  45960134 ctccttgctactggagctcaaacaacttggtt 45960165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 207
Target Start/End: Complemental strand, 30827368 - 30827302
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaac 207  Q
    |||||||||||||||||||||| | ||||||| | |||||||  |||||||| |||| |||||||||    
T  30827368 cgactaatccggctcgtgcgtagaggcatgcgtactggccaagtgttgttctccctgaaaatcgaac 30827302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 162
Target Start/End: Original strand, 34127644 - 34127698
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgt 162  Q
    ||||| |||||||||| ||| |||||||| |  ||||||||||||||||||||||    
T  34127644 ctttcgcaccggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgt 34127698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 477 - 542
Target Start/End: Original strand, 11680588 - 11680653
Alignment:
Q  477 tttgtccttaaatataaaaccgcctacaaatttttagatgcattccttactctgttttcaactata 542  Q
    ||||||||||||||||| | |   ||||||||| ||||||||||| ||||| | ||||||||||||    
T  11680588 tttgtccttaaatataagatcatttacaaatttctagatgcattctttacttttttttcaactata 11680653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 144 - 272
Target Start/End: Complemental strand, 42032170 - 42032041
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttc 242  Q
    |||||| |||||| |||||| ||| ||| ||| |||||||||||||||| || ||| ||||||||   | ||| ||||  |||||| |||||||||| |     
T  42032170 actaattcggctcatgcgtagatgtatgtgcactggccaaacgttgttccccgtgggaatcgaaccaggtattccccgggtacgtccttggaaggagctt 42032071  T
Q  243 attgccactggagctcaatcaacttggttc 272  Q
     |||| |||||||| ||| |||||| ||||    
T  42032070 cttgctactggagcccaaacaacttagttc 42032041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 1606051 - 1605951
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||  |||||||| |  ||||||||||||||||  || || | ||||| ||| ||||||| ||||||| | |||||||||||||    
T  1606051 ctttcgcaccggtttccgatccaccaaaggtgggcgactaatccggctcaagcctagaggcatgtgcactggccaagcgttgttccccctggaaatcgaa 1605952  T
Q  207 c 207  Q
    |    
T  1605951 c 1605951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 8734685 - 8734769
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||| |||||||||||  | ||||||||| || |||| | ||||||    
T  8734685 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgttgaggcatgcgcactgcccaagcattgttc 8734769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 268
Target Start/End: Original strand, 24969325 - 24969484
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| ||||||||| |||  || |||||||  |||| ||||||| || || |||| | ||| ||||| |||||||  ||||||| ||||||||||||||    
T  24969325 ctttcgcaccggtttccgagccatcaaagatgagcgattaatccgacttgtacgtagaggcacgcgcactggccaagtgttgttc-cctggaaatcgaac 24969423  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
     | | |||| ||  ||||||| ||| ||  || || ||||||||||||| ||| |||||||    
T  24969424 ccggtattttccagatacgtccttgaaaaaagctccttgccactggagcccaaacaacttg 24969484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 34127735 - 34127783
Alignment:
Q  223 tacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||| ||||||||||||| |||||| |||||| ||| ||||||||||    
T  34127735 tacgtccttggaaggagttccttgccattggagcccaagcaacttggtt 34127783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 57; Significance: 2e-23; HSPs: 50)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 13894033 - 13893869
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||  |||||||| |  ||||||||||||||||||| ||| | ||||||||| || |||| ||||||| | |||||||||| ||    
T  13894033 ctttcgcaccggttttcgatccaccaaaggtgggcgactaatccggctcgtgtgtagaggcatgcgcattgaccaagcgttgttccccctggaaatccaa 13893934  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| | ||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  13893933 cccggtattccccggacacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 13893869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 7328950 - 7328787
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||| |||||||| |  |||||||||||||||| ||||| || ||||||||| |||||||  |||||| | ||||| |||||||    
T  7328950 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatccggctcatgcgt-aaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 7328852  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||||||||  |||||| |||||||||  || |||||||| |||| ||| ||||||||||    
T  7328851 cccggtatttcccgggtacgtccttggaaggaactccttgccactagagcacaagcaacttggtt 7328787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 15320293 - 15320129
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||  ||| |||||||| |  ||||||||||||||||||||||| | |||||| || ||||||| | ||||| ||||| |||||||||    
T  15320293 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaatcattgttcctcctcgaaatcgaa 15320194  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||||||| || ||||||||||||  ||| ||||||||||    
T  15320193 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 15320129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 33251735 - 33251605
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | |||||| || |||||||||||||||| | | || |||||||| | | ||| ||| |||||||| ||||||||||     
T  33251735 cgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcccaccgggaatcgaacccggtattcccctaatacgtccttggaaggagc 33251636  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    |||||||||| ||||| ||| ||||||||||    
T  33251635 tcattgccaccggagcccaaacaacttggtt 33251605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 29128026 - 29127862
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaa 206  Q
    ||||| || |||||| |||| |||||||| |  |||||||||||||||| |||||| | ||||||||| || ||||  |||||||| |||||||||||||    
T  29128026 ctttcgcatcggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgcgcactgaccaagtgttgttctccctggaaatcgaa 29127927  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| |||  ||||||| |||||||||  || ||||||||||||| ||| ||||||||||    
T  29127926 cccgatattccccagatacgtccttggaaggatctccttgccactggagcccaaacaacttggtt 29127862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 54261333 - 54261169
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| |||| |   ||||||||||||||| |||||| | ||||||||| ||||||| ||||||| ||||| | |||||||    
T  54261333 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctaggaatcgaa 54261234  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||   |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  54261233 cccggtattccccaggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 54261169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 45877527 - 45877397
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||| ||| |||||||  |||||| | |||||||||||||| | | ||| |||| ||||||| |||||||| |     
T  45877527 cgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgtttcccctggaaatcgaacccggtattccccggatacgtccttggaaggggc 45877428  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  45877427 tccttgccactggagcccaaacaacttggtt 45877397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 114 - 271
Target Start/End: Original strand, 55069685 - 55069843
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagc 212  Q
    ||||||||| |||| |||||||| |  |||| |||||||||||||||||| | ||||| ||| |||||||||||||||| |  | | |||| ||| |||     
T  55069685 caccggtttccgacccaccaaaggtgagcgattaatccggctcgtgcgtagaggcatgtgcactggccaaacgttgttccctataggaatcaaacccagt 55069784  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| || ||||||||| ||| || ||| |||||| ||||||||| ||| ||||||||||    
T  55069785 attccctgaatacgtccttgaaaagagctcattgtcactggagcccaaacaacttggtt 55069843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 26361967 - 26362051
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||||||||||| |||| || ||||| | |||||||||||||||||||||||| | |||||| || || |||||||||||||    
T  26361967 ctttcacaccggtttccgacccatcaaaggtgtgcgactaatccggctcgtgcgtagaggcatgcacactgaccaaacgttgttc 26362051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 267
Target Start/End: Original strand, 28572211 - 28572371
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  ||||||||||||||||||||||| | ||||||  | ||||||| ||||| ||| ||||| |||||||    
T  28572211 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcatactggccaagcgttgtttcccctgggaatcgaa 28572310  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    | ||| ||| ||||  | |||  ||| |||||| || ||||||||||||| ||| ||||||    
T  28572311 cccagtattccccgggtgcgttcttgaaaggagctccttgccactggagcacaagcaactt 28572371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 142 - 268
Target Start/End: Complemental strand, 6462485 - 6462358
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| ||||||| ||||||||| ||||  |||||||| | | ||| |||  ||||||| ||||||||||     
T  6462485 cgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttctccctgtgaatcgaacccggtattccccagatacgtccttggaaggagc 6462386  T
Q  241 tcattgccactggagctcaatcaacttg 268  Q
    || |||||||| |||| ||| |||||||    
T  6462385 tccttgccactagagcccaagcaacttg 6462358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 10855458 - 10855327
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||| ||| ||||||||| | ||||||| | ||||||| |||||||| || |||||||| ||| | | ||||||| | ||| || ||||||||||    
T  10855458 gcgactaattcggttcgtgcgtagaggcatgcgtactggccaagcgttgttccccctggaaatcaaacccggtatttcccaagtacatccttggaaggag 10855359  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||||||||||||| ||| ||||||||||    
T  10855358 ctccttgccactggagcccaaacaacttggtt 10855327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 114 - 249
Target Start/End: Original strand, 15795500 - 15795635
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagca 213  Q
    |||||||||||||| |||||  | |  ||||||||| | ||||||||||| | ||||||||| || |||| |||||||| ||||| |||||||||| | |    
T  15795500 caccggttttcgacccaccattggtgggcgactaattcagctcgtgcgtagaggcatgcgcactgaccaagcgttgttcccctgggaatcgaactcggta 15795599  T
Q  214 tttcccgaatacgtctttggaaggagttcattgcca 249  Q
    || ||||  |||||| |||||||||| |||| ||||    
T  15795600 ttccccgggtacgtccttggaaggagctcatcgcca 15795635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 47749105 - 47749268
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| || |||||| ||||  ||||||| |  ||||||||| ||||||||||||| | ||||||||| |||||||  ||||||| ||| | ||||||||    
T  47749105 ctttcgcatcggtttccgacctaccaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaagagttgttcccctaggaatcgaac 47749204  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     | | ||| || | ||||||| ||||||| || ||||| |||||||||| ||| ||| ||||||    
T  47749205 ccggtattccctggatacgtccttggaagaagctcattaccactggagcccaaacaatttggtt 47749268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 51682987 - 51683118
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||||||||||||| | | | ||||||||| ||| ||| |||||||| || ||| ||||||||   | ||| |||| ||||||||||||||||||    
T  51682987 gcgactaatccggctcgtgtggagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaacctggtattccccggatacgtctttggaaggag 51683086  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || | ||||||||||| ||| ||||||||||    
T  51683087 ctcctcgccactggagcccaaacaacttggtt 51683118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 3755643 - 3755513
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| |  |||||||| ||| ||||||||||| ||||||| ||||||| || | ||| |||| ||||||| ||| || |||     
T  3755643 cgactaatccggctcatgcgtagagacatgcgcactggtcaaacgttgttcctcctgggaatcgaagtcggtattccccggatacgtccttgaaaagagc 3755544  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||  ||| ||||||||||    
T  3755543 tctttgccactggagtccaagcaacttggtt 3755513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 149 - 271
Target Start/End: Complemental strand, 10040622 - 10040500
Alignment:
Q  149 tccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgcc 248  Q
    ||||||||||||||| | ||||||||| ||||||| |||||||| ||||  |||||||| |   ||| ||||  |||||| || ||||||| || |||||    
T  10040622 tccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctgagaatcgaacccgatattccccgggtacgtccttagaaggagctccttgcc 10040523  T
Q  249 actggagctcaatcaacttggtt 271  Q
    |||||||| ||| ||||||||||    
T  10040522 actggagcccaagcaacttggtt 10040500  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 39849145 - 39849015
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||| |||||| | |||||| || ||||||| ||||||||  |||| |||||||| |   ||| || || |||||| ||||||||||     
T  39849145 gcgactaatccggctcatgcgtagaggcatgcacactggccaagcgttgttcctctgggaatcgaacccgaaattccctgagtacgtccttggaaggagc 39849046  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| | ||||||||    
T  39849045 tccttgccactggagcccaagcgacttggtt 39849015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 7310703 - 7310867
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaa 206  Q
    ||||| || |||||| |||| ||||||||||  ||||||||||||||||||||||| | |||||| ||  || |||  ||||||| | |||| |||||||    
T  7310703 ctttcgcatcggtttccgacccaccaaagatgagcgactaatccggctcgtgcgtagaggcatgcacaccgggcaagtgttgttcccactgggaatcgaa 7310802  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| | |   |||||  |||||||||| |||||||||| ||||| ||||||||||||||    
T  7310803 cccggtattcctcaggtacgttcttggaaggagctcattgccaccggagcccaatcaacttggtt 7310867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 192
Target Start/End: Original strand, 3507534 - 3507617
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    |||| ||||||||| |||| |||||||| |  ||||||||||||||||||||||| | ||||||||| |||||||  |||||||    
T  3507534 tttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttc 3507617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 42412807 - 42412938
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||||||||| |||||| | ||||| ||| | ||||| ||||||| | || || |||||||| | | ||| |||| ||||||| ||||||||||    
T  42412807 gcgactaatccggctcatgcgtagaggcatgggcacttgccaagcgttgttccccccgggaatcgaacccggtattccccggatacgtccttggaaggag 42412906  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || |||||| |||||| ||| ||||||||||    
T  42412907 ctccttgccattggagcccaagcaacttggtt 42412938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 26207835 - 26207965
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | |||||| || ||| ||| |||||||| || ||| |||||||| | | ||| ||||  ||| || ||||||||||     
T  26207835 cgactaatccggctcatgcgtagaggcatgcacactggacaagcgttgttccccgtgggaatcgaacccggtattccccgggtacatccttggaaggagc 26207934  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  26207935 tccttgccactggagcccaagcaacttggtt 26207965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 35316065 - 35315899
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcg 204  Q
    ||||||| || |||||| |||| |||||||  |  ||||||||||| |||| |||||| | ||||||||| |||||||  ||||||| || ||| |||||    
T  35316065 ttctttcgcatcggtttccgacccaccaaaagtgggcgactaatccagctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcg 35315966  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| |   |||  |||  |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  35315965 aacccgatattctccgggtacgtccttggaaggagctctttgccactggagcccaaacaacttggtt 35315899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 143 - 271
Target Start/End: Complemental strand, 29135985 - 29135856
Alignment:
Q  143 gactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||||||| |||||| | ||||||||| |||||||  |||||| | ||||| |||||||  | | ||| |||| ||||||| ||||||| || |    
T  29135985 gactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaatccggtattccccggatacgtccttggaagaagct 29135886  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||| ||| ||| ||||||    
T  29135885 ccttgccactggagcccaagcaatttggtt 29135856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 8164660 - 8164576
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||| ||| ||| |||  |||||||| |  |||||||||||| |||||||||||| ||||||||| ||||||| ||||||||    
T  8164660 ctttcacgccgatttccgatccaccaaaggtgggcgactaatccgactcgtgcgtaaaggcatgcgcactggccaagcgttgttc 8164576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 140 - 271
Target Start/End: Complemental strand, 28242353 - 28242221
Alignment:
Q  140 tgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaagga 238  Q
    ||||||||||||| ||| ||| || | ||||| ||| ||||||||| ||||| ||||||| |||| ||| | | |||  ||| ||||||| |||||||||    
T  28242353 tgcgactaatccgcctcatgcatagaggcatgtgcactggccaaacattgttcctcctggcaatctaacccggtattctccggatacgtcattggaagga 28242254  T
Q  239 gttcattgccactggagctcaatcaacttggtt 271  Q
    | || || |||| ||||||||| ||||||||||    
T  28242253 gctctttaccaccggagctcaagcaacttggtt 28242221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 41630512 - 41630676
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    |||||||||| |||| ||||  ||||||| |  |||||||||||||||| || ||| | ||||||||| ||| ||| |||||||| || ||| ||| |||    
T  41630512 ctttcacaccagtttccgaccaaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgggcaagcgttgttccccttgggaattgaa 41630611  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | |||| |||  ||||||  ||||||||| || ||| ||||||||| ||| ||||||||||    
T  41630612 cccggtattttccggttacgtccatggaaggagctccttgtcactggagcccaaacaacttggtt 41630676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 155 - 266
Target Start/End: Complemental strand, 49082884 - 49082772
Alignment:
Q  155 tcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactgg 253  Q
    ||||| ||| ||||||||||| |||| || ||||||||||| ||| |||||||||| | ||| |||| ||||||| || ||||||| ||  |||||||||    
T  49082884 tcgtgtgtagatgcatgcgcactggctaagcgttgttctccctgggaatcgaactcggtattccccggatacgtccttagaaggagctccctgccactgg 49082785  T
Q  254 agctcaatcaact 266  Q
    ||| ||| |||||    
T  49082784 agcccaaacaact 49082772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 105 - 271
Target Start/End: Original strand, 29762152 - 29762319
Alignment:
Q  105 cttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatc 203  Q
    |||||||| ||||||||| |||| |||||| | |   |||||||||| |||| ||| || | ||||||||| |||||||  |||||| | ||||  ||||    
T  29762152 cttctttcgcaccggtttccgacccaccaatggtggacgactaatccagctcatgcatagaggcatgcgcactggccaagtgttgttgcccctgagaatc 29762251  T
Q  204 gaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | || |   ||| ||||||||| || |||||||||| || ||||||||||||| ||| ||||||||||    
T  29762252 ggacccgatattccccgaatacatccttggaaggagctccttgccactggagcccaagcaacttggtt 29762319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 47164213 - 47164158
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgta 163  Q
    ||||||||||||||| |||  ||||||||||  |||||||||||||||||||||||    
T  47164213 ctttcacaccggtttccgatccaccaaagatgagcgactaatccggctcgtgcgta 47164158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 25295033 - 25294903
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| ||| || | ||||||||| |||||||  ||||||  ||  || |||| ||| | | ||| |||| ||||||| ||||||||||     
T  25295033 cgactaatccggctcatgcatagaggcatgcgcactggccaagtgttgtttccccagagaatcaaacccggtattccccggatacgtccttggaaggagc 25294934  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  25294933 tccttgccactggagcccaagcaacttggtt 25294903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 170 - 271
Target Start/End: Complemental strand, 50682522 - 50682420
Alignment:
Q  170 tgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    |||||| ||||||| ||||||||||| | |||||||||| |   |||| ||||||||||| || ||||||| |  |||||||| |||||||| |||||||    
T  50682522 tgcgcactggccaagcgttgttctccctagaaatcgaaccctatattttccgaatacgtcattcgaaggagcttcttgccactagagctcaaacaacttg 50682423  T
Q  269 gtt 271  Q
    |||    
T  50682422 gtt 50682420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 119 - 207
Target Start/End: Original strand, 30767258 - 30767347
Alignment:
Q  119 gttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaac 207  Q
    |||| |||| |||||||| |  ||||||||||||||||||||||| | |||||| || |||||||  |||||| | ||||||||||||||    
T  30767258 gtttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctggaaatcgaac 30767347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 146 - 270
Target Start/End: Complemental strand, 41219661 - 41219537
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    |||||| ||||||||| | | |||| |||| ||||||||||||||| ||||||  |||||||||  | | |||||| ||||||| || ||||||| ||||    
T  41219661 taatccagctcgtgcgcagaggcatacgcactggccaaacgttgttcctcctgagaatcgaacttggta-ttcccgtatacgtccttagaaggagctcat 41219563  T
Q  245 tgccactggagctcaatcaacttggt 270  Q
    ||| || ||||| ||| |||||||||    
T  41219562 tgcaacgggagcccaagcaacttggt 41219537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 116 - 207
Target Start/End: Complemental strand, 26043911 - 26043819
Alignment:
Q  116 ccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaac 207  Q
    |||||||  ||| |||||||| |  |||||||||||||||| |||||| | ||||||||| |||||||  |||||||| ||||| ||||||||    
T  26043911 ccggtttctgactcaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttctccctgggaatcgaac 26043819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 115 - 175
Target Start/End: Original strand, 43330739 - 43330799
Alignment:
Q  115 accggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgca 175  Q
    ||||||||| ||| |||||||| |  ||||||||||||||||||||||| | |||||||||    
T  43330739 accggtttttgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgca 43330799  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 141 - 192
Target Start/End: Complemental strand, 7648814 - 7648763
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||||||||||||||||||| | | ||||||| ||| ||||||||||||    
T  7648814 gcgactaatccggctcgtgcgtagaggtatgcgcactggtcaaacgttgttc 7648763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Original strand, 36043674 - 36043729
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgta 163  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||||||||||||||||    
T  36043674 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcgtgcgta 36043729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 118 - 267
Target Start/End: Original strand, 22405553 - 22405703
Alignment:
Q  118 ggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcattt 216  Q
    ||||| |||| ||||||||||   ||| ||||||||||||||| |||| |||| |||| |||  || ||||||| ||||||  ||| |||  | | ||||    
T  22405553 ggtttccgacgcaccaaagatggacgattaatccggctcgtgcataaaggcattcgcattggttaagcgttgttcctcctgagaatagaatccggtattt 22405652  T
Q  217 cccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    | || ||||||| |||| ||||| || ||||||||||||| ||| ||||||    
T  22405653 cacggatacgtcattggtaggagctccttgccactggagcccaaacaactt 22405703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 145 - 195
Target Start/End: Original strand, 34460547 - 34460597
Alignment:
Q  145 ctaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc 195  Q
    ||||||||||||||||||  | |||||| || |||||||||||||||||||    
T  34460547 ctaatccggctcgtgcgtggaggcatgcacactggccaaacgttgttctcc 34460597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 35923629 - 35923707
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    |||||||||||||  || |||||||   |||||||| || ||||||| || | ||||||||| ||||||||||||||||    
T  35923629 caccggttttcgatccatcaaagatggacgactaattcgactcgtgcttagaggcatgcgcactggccaaacgttgttc 35923707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 49198424 - 49198294
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| |||||||  |||||| | ||| | |||||||| | | ||| |||| ||| ||| ||||||| |      
T  49198424 cgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctaggaatcgaacccggtattccccggatatgtccttggaagaaac 49198325  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||| ||||||||| ||| ||||||||||    
T  49198324 tccttgtcactggagcccaaacaacttggtt 49198294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 239
Target Start/End: Original strand, 52364838 - 52364932
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||| ||||||||||| | ||||||||| ||| ||| ||||||| || |||| |||||||||| | ||| ||||  |||||| ||||||||||    
T  52364838 taatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgttccttctgggaatcgaactcggtattccccgggtacgtccttggaaggag 52364932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 193
Target Start/End: Original strand, 15084945 - 15085030
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct 193  Q
    ||||||||||||||| |||  |||||||||||  |||||||||  |||||| |||| | | |||| || ||||||| |||||||||    
T  15084945 ctttcacaccggtttccgatccaccaaagatagacgactaatctagctcgtacgtagaggtatgcacactggccaaccgttgttct 15085030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 108 - 252
Target Start/End: Complemental strand, 47219251 - 47219106
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| || ||||| |   ||||||||||||||| |||||| | ||||||||| | ||||| ||||| ||| | ||| |||||||    
T  47219251 ctttcgcaccggtttccgacccatcaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactagccaagcgttgtttcccttgggaatcgaa 47219152  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactg 252  Q
    |   | ||| |||| ||||||| |||||| ||| ||||| ||||||    
T  47219151 cctggtattccccggatacgtccttggaaagagctcattaccactg 47219106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 50405609 - 50405686
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt 191  Q
    ||||||||| |||| |||||| | |  |||||||||||| |||||||||| | ||||||||| ||| ||| |||||||    
T  50405609 caccggtttccgacccaccaatggtgggcgactaatccgactcgtgcgtagaggcatgcgcactggtcaagcgttgtt 50405686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 144 - 207
Target Start/End: Complemental strand, 4638225 - 4638161
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaac 207  Q
    |||||||||||||||||||| | | ||||||| ||| ||| ||||| ||||||||| ||||||||    
T  4638225 actaatccggctcgtgcgtagaggtatgcgcactggtcaagcgttgtttctcctgggaatcgaac 4638161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 7650334 - 7650234
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| | || |||||||| |  ||||||||||||||||||||||| |  ||| || | |||||||  |||||| | |||||||||||||    
T  7650334 ctttcgcaccggtttccaacccaccaaaggtgggcgactaatccggctcgtgcgtagagacattcgtactggccaagtgttgttccccctggaaatcgaa 7650235  T
Q  207 c 207  Q
    |    
T  7650234 c 7650234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Complemental strand, 48342011 - 48341963
Alignment:
Q  223 tacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  48342011 tacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 48341963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 52011084 - 52011132
Alignment:
Q  223 tacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||| ||||||||||||| ||||||||| || |||| ||||||||||    
T  52011084 tacgtccttggaaggagttccttgccactgaagttcaaacaacttggtt 52011132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 57; Significance: 2e-23; HSPs: 52)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 7747381 - 7747217
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| |||| |   ||||||||||||||| |||||| | |||||| || ||||||||||||||| ||||| | |||||||    
T  7747381 ctttcgcaccggtttccgacccactaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacgttgttcctcctaggaatcgaa 7747282  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||| ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  7747281 cccggtattccccggatacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 7747217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 55; E-Value: 3e-22
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 22593207 - 22593078
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| ||||||| |||||||| || ||| |||||||||||| ||| ||||  |||||| ||||||||||     
T  22593207 cgactaatccggctcatgcgtagaggcatgcgcactggccaa-cgttgttccccctgggaatcgaactcagtattccccgggtacgtccttggaaggagc 22593109  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  22593108 tccttgccactggagcacaagcaacttggtt 22593078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 10026615 - 10026779
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    |||||||||  |||| |||| |||||||| |   ||||||||||||||| |||||| | ||||||||| ||||||||||||||| | ||||  |||||||    
T  10026615 ctttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcactggccaaacgttgttccccctgagaatcgaa 10026714  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | |||| |||| |||||| |||||||||| || |||||| |||||| ||| ||||||||||    
T  10026715 cccggtattttccgagtacgtccttggaaggagctccttgccattggagcccaagcaacttggtt 10026779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 18902529 - 18902693
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||| |||||||||||| |  || ||||| ||| ||| |||||||| || ||| |||||||    
T  18902529 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatctggctcgtgcgtagagacacgcgcactggtcaagcgttgttccccgtgggaatcgaa 18902628  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||| |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  18902629 cccggtattccccgagtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 18902693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 38005509 - 38005345
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcct-ggaaatcgaa 206  Q
    ||||| |||| |||| |||  |||||||| |  |||||||||||||||| || ||| | ||||||||| ||||||| |||||||| ||| || |||||||    
T  38005509 ctttcgcaccagtttccgatccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactggccaagcgttgttccccttgggaatcgaa 38005410  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | ||| ||| ||||  |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  38005409 cccagtattccccgggtacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 38005345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 114 - 268
Target Start/End: Complemental strand, 21286545 - 21286390
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    ||||||||| | || |||||| |||  | ||||||||| ||||||||||| | ||||||||| ||| ||| ||||||| | ||||| |||||||| | |     
T  21286545 caccggtttccaacccaccaatgatgagtgactaatccagctcgtgcgtagaggcatgcgcactggtcaagcgttgtttcgcctgggaatcgaacccggt 21286446  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    ||| |||| ||||||| |||||||||| || ||||||||||||||||| |||||||    
T  21286445 attccccggatacgtccttggaaggagctccttgccactggagctcaaacaacttg 21286390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 29653701 - 29653571
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||| ||||||||||||| | ||||||||| || |||| ||||||| ||| |||||||||||  | | |||||| || |||||| ||||||| ||    
T  29653701 gcgactaattcggctcgtgcgtagaggcatgcgcactgcccaagcgttgttttccctggaaatcgaatccggtatttccggagtacgtccttggaagaag 29653602  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||||||||||||| ||| ||||||||||    
T  29653601 ttcattgccactggagc-caaacaacttggtt 29653571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 7e-20
Query Start/End: Original strand, 114 - 267
Target Start/End: Complemental strand, 7787157 - 7787003
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    |||||||||||||  ||||||||||  ||||||||||||||||||||||| | ||||||| | |||||||   ||||| | |||||||||||||| | |     
T  7787157 caccggttttcgatccaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcgtactggccaagtattgttccccctggaaatcgaacccggt 7787058  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    ||| ||||  |||||| | | ||||||||| ||||||||||||| ||| ||||||    
T  7787057 attccccgggtacgtcctagaaaggagttccttgccactggagcccaaccaactt 7787003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 143 - 271
Target Start/End: Original strand, 13026445 - 13026574
Alignment:
Q  143 gactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||||||| |||||| | ||||||||| ||||||| | |||||| |||||  |||||||| |   ||| || | ||||||| ||||||||||||    
T  13026445 gactaatccggctcatgcgtagaggcatgcgcactggccaatcattgttcctcctgataatcgaacccgatattccctggatacgtccttggaaggagtt 13026544  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | |||||||||||| |||||||||||||||    
T  13026545 ccttgccactggagttcaatcaacttggtt 13026574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 3e-19
Query Start/End: Original strand, 120 - 268
Target Start/End: Original strand, 45263678 - 45263827
Alignment:
Q  120 ttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcc 218  Q
    |||||||| ||||||||||  |||| |||||||||||||||||| | ||||||||| ||||||| |||||||| | |||| |||||||| | | ||| ||    
T  45263678 ttttcgacccaccaaagatgagcgattaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccctctgggaatcgaacccggtattccc 45263777  T
Q  219 cgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    || |||  | |||| |||||| || ||||||||||||| ||| |||||||    
T  45263778 cggataaatttttgaaaggagctccttgccactggagcccaaacaacttg 45263827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 331608 - 331444
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    |||||| || ||||| | || |||||||| |  |||||||||||||||| |||||| | ||||||||| |||||||  ||||||| || ||| |||||||    
T  331608 ctttcatactggtttccaacccaccaaaggtgggcgactaatccggctcatgcgtagaagcatgcgcactggccaagtgttgttccccctgggaatcgaa 331509  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||| ||| |||||||||||||||| ||| ||||||||||    
T  331508 cccggtattccccgggtacgtccttggaaagagctcattgccactggagcccaagcaacttggtt 331444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 255
Target Start/End: Original strand, 25540403 - 25540551
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |   |||||||||||||||||||||| | ||||||||| ||||||| ||||||| | ||| | |||||||    
T  25540403 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctaggaatcgaa 25540502  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggag 255  Q
    | ||| ||| |||  ||||||| |||||| ||| || ||||||||||||    
T  25540503 cccagtattccccagatacgtccttggaatgagctccttgccactggag 25540551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 117 - 271
Target Start/End: Original strand, 42770659 - 42770814
Alignment:
Q  117 cggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatt 215  Q
    ||||||||||| |||||||| |   ||| |||||||||||||||| | | ||||||||| ||||||| ||||||| | ||||  ||| |||| | | |||    
T  42770659 cggttttcgacccaccaaaggtggacgattaatccggctcgtgcgaagaggcatgcgcactggccaagcgttgttccccctgagaattgaacccggtatt 42770758  T
Q  216 tcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    || || ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  42770759 tctcggatacgtccttggaaggagctctttgccactggagcccaagcaacttggtt 42770814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 44945700 - 44945537
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| ||||||||| |||  ||| |||| |  ||||||||||||||||||||||| | ||||||||| |  |||| ||||||||  |||| |||| |||    
T  44945700 ctttcgcaccggtttccgatccactaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactatccaagcgttgttcctctgggaatcaaac 44945601  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     ||| |||  |||| |||||| |||||||||| || |||||||| |||| ||| ||||||||||    
T  44945600 ccagtattctccgagtacgtccttggaaggagctccttgccacttgagcccaagcaacttggtt 44945537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 106 - 271
Target Start/End: Complemental strand, 2550977 - 2550811
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcg 204  Q
    ||||||| ||||||||||| || |||||||  |  |||||||||||||||| |||||| |  |||||||| |||| ||  ||||||| |||||| |||||    
T  2550977 ttctttcgcaccggttttcaacccaccaaaagtgggcgactaatccggctcatgcgtagagacatgcgcactggctaagtgttgttcctcctgggaatcg 2550878  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| |   ||| |||| ||||||| ||| |||||| || ||||||||||||| ||| ||||||||||    
T  2550877 aacccgatattccccggatacgtccttgtaaggagctccttgccactggagcccaagcaacttggtt 2550811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 29422288 - 29422158
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||||||||||| | |||| || |||||||  ||||||| | ||||||||||||| ||| ||| ||||  |||||| ||| ||||||     
T  29422288 cgactaatccggctcgtgcgtaaaggtatgctcattggccaagtgttgttccctctggaaatcgaacccagtattccccgggtacgtccttgaaaggagc 29422189  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || |||| |||||||| ||| ||||||||||    
T  29422188 tccttgctactggagcccaaacaacttggtt 29422158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 106 - 273
Target Start/End: Original strand, 6358148 - 6358316
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcg 204  Q
    |||||||||||||||||||||| |||||| | |   ||||||||||||||| |||||| | ||||||||| |||||||  |||||| | |||||||||||    
T  6358148 ttctttcacaccggttttcgacccaccaatggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctggaaatcg 6358247  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttca 273  Q
    ||    | ||| |||| ||||||| || ||| ||| |  ||||||||||||| ||| ||||| ||||||    
T  6358248 aatctggtattccccggatacgtcctttgaatgagcttcttgccactggagcccaaacaactcggttca 6358316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 8410238 - 8410074
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| | |||||  |  ||||||||||||||||||||||| | ||||||||| |||||||  |||||| | ||||| |||||||    
T  8410238 ctttcgcaccggtttccgaccccccaaaagtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 8410139  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   |||  |||  |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  8410138 cccgatattctccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 8410074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 239
Target Start/End: Complemental strand, 10823167 - 10823035
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| |||| |  ||||||||||||||||||||||| | ||||||||| ||||||| ||||||| ||||||| |||| ||    
T  10823167 ctttcgcaccggtttccgacccacaaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcaaa 10823068  T
Q  207 ctcagcatttcccgaatacgtctttggaaggag 239  Q
    | | | ||| ||||  |||||| ||||||||||    
T  10823067 cccggtattccccgggtacgtccttggaaggag 10823035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 254
Target Start/End: Complemental strand, 41220742 - 41220595
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| |||| |   |||||||| |||||| |||||| | ||||||||| ||||||| |||||||| |||||| |||||||    
T  41220742 ctttcgcaccggtttccgacccactaaaggtgaacgactaattcggctcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 41220643  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactgga 254  Q
    | | | ||| ||||  |||||| |||||||||| || |||||||||||    
T  41220642 cccggtattccccgggtacgtccttggaaggagctccttgccactgga 41220595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 142 - 228
Target Start/End: Complemental strand, 35946811 - 35946725
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtc 228  Q
    |||||||||||||||||||||| | |||||| |||||||||| |||||||| ||| | |||||||||| | ||| |||| |||||||    
T  35946811 cgactaatccggctcgtgcgtagaggcatgcacaatggccaagcgttgttcccctaggaatcgaactcggtattccccggatacgtc 35946725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 114 - 271
Target Start/End: Original strand, 39201513 - 39201671
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    ||||||||| |||| |||||||| |   ||||||||||||||| |||||| | |||||| || ||||||||| ||||| | ||||  ||||||| || |     
T  39201513 caccggtttccgacccaccaaaggtgaacgactaatccggctcatgcgtagaggcatgcacactggccaaacattgttccccctgagaatcgaattcggt 39201612  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||| | ||| |||||| |||||||||| || ||||||||  ||| ||||||||||||||    
T  39201613 attcctcgagtacgtccttggaaggagctccttgccactatagcccaatcaacttggtt 39201671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 43; E-Value: 0.000000000000004
Query Start/End: Original strand, 108 - 273
Target Start/End: Complemental strand, 44139591 - 44139425
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||  | |  ||||||||||||||||||||||| | ||| ||||| ||||||| ||||||| | ||||| |||||||    
T  44139591 ctttcgcaccggtttccgacccaccattggtgggcgactaatccggctcgtgcgtagaggcacgcgcactggccaagcgttgttccccctgggaatcgaa 44139492  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttca 273  Q
    | | | ||| |||  || | || ||||||||||||| |  |||||||||| ||| ||||||||||||    
T  44139491 cccggtattccccagatgcatccttggaaggagttcctcaccactggagcccaagcaacttggttca 44139425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 108 - 268
Target Start/End: Complemental strand, 37560280 - 37560119
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaa 206  Q
    |||||||||||||||||||| || ||||| |   ||| |||||||||||||||||| | ||||||||| || ||||||||||||| ||| || |||||||    
T  37560280 ctttcacaccggttttcgacccatcaaaggtggacgattaatccggctcgtgcgtagaggcatgcgcactgaccaaacgttgttccccttgagaatcgaa 37560181  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    |   | ||| | ||  |||||| |||||||||| |  || |||||||||| ||| |||||||    
T  37560180 cctggtattcctcgggtacgtccttggaaggagcttcttaccactggagcccaaacaacttg 37560119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 207
Target Start/End: Complemental strand, 12455417 - 12455317
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |  ||||||||||||||||||||||| | ||||||||| |||| || ||||| ||| |||||||||||||    
T  12455417 ctttcgcaccggtttccgacccaccaatggtgagcgactaatccggctcgtgcgtagaggcatgcgcactggctaagcgttgtttcccctggaaatcgaa 12455318  T
Q  207 c 207  Q
    |    
T  12455317 c 12455317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 12864331 - 12864167
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   ||||||||| ||||| |||| | | ||||||||| || ||||  ||||||| || |||||||||||    
T  12864331 ctttcgcaccggtttccgacccaccaatggtggacgactaatctggctcatgcgcagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaa 12864232  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
      | | ||| |||||||||||| |||||||||| || ||| ||||||||| ||| ||||||||||    
T  12864231 tccggtattccccgaatacgtcattggaaggagctccttgtcactggagcccaaacaacttggtt 12864167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 105 - 272
Target Start/End: Complemental strand, 38962873 - 38962705
Alignment:
Q  105 cttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatc 203  Q
    |||||||| |||| ||||  ||| |||||||| |   |||||||||||| || |||||| | ||||||||| ||||||| ||||||| |||||| |||||    
T  38962873 cttctttcgcaccagtttctgacccaccaaaggtggacgactaatccggttcatgcgtagaggcatgcgcactggccaagcgttgttcctcctgaaaatc 38962774  T
Q  204 gaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttc 272  Q
    |||| | | ||| |||| ||||||| ||| || ||| || || |||||||||  ||| |||||||||||    
T  38962773 gaacccggtattccccggatacgtccttgaaatgagctccttaccactggagtccaaacaacttggttc 38962705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 271
Target Start/End: Original strand, 21180346 - 21180477
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||||||||||||||||| | ||||| ||| |||||||  |||||||||| ||| |||||||  | | |||   ||  |||||| ||||||||||    
T  21180346 gcgactaatccggctcgtgcgtagaggcatgtgcactggccaagtgttgttctccatgggaatcgaatccggtattcttcgggtacgtccttggaaggag 21180445  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||||||||||||| ||| ||||||||||    
T  21180446 ctccttgccactggagcccaaacaacttggtt 21180477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 106 - 191
Target Start/End: Original strand, 9360745 - 9360830
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt 191  Q
    ||||||| ||||||||| || | ||| |||| |  ||||||||| ||||||||||||| | ||||||||| |||||||||||||||    
T  9360745 ttctttcgcaccggtttccggcccactaaaggtgggcgactaattcggctcgtgcgtagaggcatgcgcactggccaaacgttgtt 9360830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 207
Target Start/End: Complemental strand, 24179669 - 24179576
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||||||||  || ||||||||||   ||||||||||||||| |||||| | ||||| ||| |||||||||||||||| ||||  ||||||||    
T  24179669 caccggtttttaacccaccaaagatggacgactaatccggctcatgcgtagaggcatgtgcactggccaaacgttgttcccctgagaatcgaac 24179576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 2528340 - 2528504
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| |||| |||| |||| ||| ||||||  |||||||||||||||  || ||| | |||||| || || |||| |||||||| || ||| |||||||    
T  2528340 ctttcgcaccagtttccgactcactaaagatgagcgactaatccggcttatgtgtagaggcatgcacactgaccaagcgttgttccccctgggaatcgaa 2528439  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | |  || | ||| |||||| |||||||||| |||||||||||||||| ||| ||| ||||||    
T  2528440 cccggtgttcctcgagtacgtccttggaaggagctcattgccactggagcccaaacaatttggtt 2528504  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 14169608 - 14169772
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | ||  ||||||||||||||| |||||| |  |||||||| ||| |||  ||||||| || ||| |||||||    
T  14169608 ctttcgcaccggtttccgacccaccaatggtagacgactaatccggctcatgcgtagagacatgcgcactggtcaagtgttgttcccccggagaatcgaa 14169707  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | |   ||| |||||||||||| |||||| ||  || ||| ||||||||| ||| ||||||||||    
T  14169708 cccgatattccccgaatacgtccttggaaagatctccttgtcactggagcccaaacaacttggtt 14169772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 15079557 - 15079426
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||  |||||||||||| |  ||||| || ||| ||| |||||||| || |||||||||||| | | ||| ||||  |||||| |||||||| |    
T  15079557 gcgactaatttggctcgtgcgtagagtcatgcacactggtcaagcgttgttccccctggaaatcgaaccctgtattccccgggtacgtccttggaaggtg 15079458  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
    ||| ||||||| ||||| ||| ||||||||||    
T  15079457 ttccttgccaccggagcccaagcaacttggtt 15079426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 252
Target Start/End: Complemental strand, 16035046 - 16034899
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcg 204  Q
    ||||||| ||||||||| |||| || ||| | |  |||||||||||||||||| |||| | |||||| || ||| ||| ||||||| | |||| ||||||    
T  16035046 ttctttcgcaccggtttccgactcatcaatggtgagcgactaatccggctcgtacgtataggcatgcacactggtcaagcgttgttccgcctgaaaatcg 16034947  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactg 252  Q
    ||| | | ||| | || ||||||| ||||||||||||| || ||||||    
T  16034946 aacccggtattcctcggatacgtccttggaaggagttccttaccactg 16034899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 142 - 256
Target Start/End: Complemental strand, 25549801 - 25549686
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||||||||| | ||||| ||| | |||||| |||||| | |||   |||||||| ||| ||| ||| |||||||  ||||||||||     
T  25549801 cgactaatccggctcgtgcgtagaggcatgtgcactagccaaatgttgttttccctaagaatcgaacccagtattccccaaatacgtacttggaaggagc 25549702  T
Q  241 tcattgccactggagc 256  Q
    || |||||||||||||    
T  25549701 tccttgccactggagc 25549686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 20612534 - 20612699
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatcc-ggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc--tcctggaaatcga 205  Q
    |||| ||||||||| |||| |||||| | |   |||||||||| ||||| ||| || | ||||||||| |||||||  |||||||  |||||  ||||||    
T  20612534 tttcgcaccggtttccgacccaccaatggtggacgactaatcccggctcatgcatagaggcatgcgcactggccaagtgttgttccctcctgagaatcga 20612633  T
Q  206 actcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    || | | ||| |||||||||  | |||||||||| || ||||||||||||| ||| ||||||||||    
T  20612634 acccggtattccccgaatacaaccttggaaggagctccttgccactggagcccaagcaacttggtt 20612699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 207
Target Start/End: Original strand, 34130335 - 34130400
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||||||| ||||| |||||| |  |||| ||||||| ||||||||||||||||| |||||||||    
T  34130335 cgactaatctggctcatgcgtagagacatgtgcaatggtcaaacgttgttctcctgaaaatcgaac 34130400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 27726047 - 27725963
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||||||||||| |||| |||||  | |  ||||||||||||||| ||||||| | ||||||||| ||||||| | ||||||    
T  27726047 ctttcacaccggtttccgacccaccattggtgggcgactaatccggctagtgcgtagaggcatgcgcactggccaagcattgttc 27725963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 41031905 - 41032068
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||| ||||| |||| |||||||| |  | ||||||||||||||||||||| | |||||| || |||||||  |||||| | ||||| |||||||    
T  41031905 ctttcgcactggtttccgacccaccaaaggtgggtgactaatccggctcgtgcgtagaggcatgcacactggccaagtgttgttccccctgggaatcgaa 41032004  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | |   |||||   |||||| |||||||||| || ||||||||||||| ||| ||| ||||||    
T  41032005 c-ccggtgttccctggtacgtccttggaaggagctccttgccactggagcccaagcaatttggtt 41032068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 271
Target Start/End: Original strand, 10046477 - 10046639
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaac 207  Q
    ||||||||  |||| |||| |||||||| |   ||||||||||||||| |||||| | ||||||||| | | |||||||||||  ||| || ||||||||    
T  10046477 tttcacactagtttccgacccaccaaaggtggtcgactaatccggctcatgcgtagaggcatgcgcact-gtcaaacgttgtttcccttgagaatcgaac 10046575  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     | | |||  ||| ||||||  |||||||||| || |||||| |||||| ||| ||||||||||    
T  10046576 ccggtattctccggatacgttcttggaaggagctccttgccattggagcccaagcaacttggtt 10046639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 196 - 267
Target Start/End: Original strand, 20963198 - 20963268
Alignment:
Q  196 tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaactt 267  Q
    |||||||||||||| | ||| |||| ||||||| |||||||||| || ||||||||||||| ||| ||||||    
T  20963198 tggaaatcgaactc-gtattccccggatacgtcattggaaggaggtccttgccactggagcccaaacaactt 20963268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 181 - 271
Target Start/End: Complemental strand, 29697558 - 29697467
Alignment:
Q  181 caaacgttgttctcctggaaatcgaactcagcatt-tcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||||||||| ||||| |||| ||||||| ||| | |||  |||||  ||||||||||||| ||||||||||||| ||| || |||||||    
T  29697558 caaacgttgttcccctgggaatcaaactcagtattcttccgtgtacgttattggaaggagttccttgccactggagcccaaacaccttggtt 29697467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 158 - 276
Target Start/End: Original strand, 40968964 - 40969083
Alignment:
Q  158 tgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagc 256  Q
    |||||| | |||| |||| || |||||||||||| ||| |||||||||||| | | ||| || ||  ||||| |||||| ||  ||||||||||| ||||    
T  40968964 tgcgtagaggcattcgcactgaccaaacgttgttttccctggaaatcgaacccggtattccctgagaacgtccttggaatgaactcattgccactagagc 40969063  T
Q  257 tcaatcaacttggttcatat 276  Q
     ||| |||||||||||||||    
T  40969064 ccaagcaacttggttcatat 40969083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 108 - 273
Target Start/End: Original strand, 3811690 - 3811856
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaa 206  Q
    ||||| || ||||||  ||| |||||||| |  |||| ||||||||||| |||||| | ||||||||| || ||||  ||||||| | |||| |||||||    
T  3811690 ctttcgcatcggtttctgacccaccaaaggtgggcgagtaatccggctcatgcgtagaggcatgcgcattgaccaagtgttgttccctctgggaatcgaa 3811789  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttca 273  Q
    | |   ||| | ||| |||||| ||||||||||||| |||||| || ||  ||| ||||||||||||    
T  3811790 cccgatattcctcgagtacgtccttggaaggagttccttgccattgaagaccaaacaacttggttca 3811856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 16813198 - 16813312
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    ||||||||||||||||||| || | ||||||| | ||| |||||||||||| |||| || | |||||  | |||  |||| |||||| |||||||||| |    
T  16813198 cgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccctgaaagttgaacttggtattctccgagtacgtccttggaaggagct 16813297  T
Q  242 cattgccactggagc 256  Q
    | ||| || ||||||    
T  16813298 ccttgtcagtggagc 16813312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 256
Target Start/End: Original strand, 16852477 - 16852591
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    ||||||||||||||||||| || | ||||||| | ||| |||||||||||| |||| || | |||||  | |||  |||| |||||| |||||||||| |    
T  16852477 cgactaatccggctcgtgcatagaggcatgcgtactggtcaaacgttgttcccctgaaagttgaacttggtattctccgagtacgtccttggaaggagct 16852576  T
Q  242 cattgccactggagc 256  Q
    | ||| || ||||||    
T  16852577 ccttgtcagtggagc 16852591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 206
Target Start/End: Original strand, 28525489 - 28525554
Alignment:
Q  143 gactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt--ctcctggaaatcgaa 206  Q
    ||||||||||||||||||||| | ||||||||| |||||||  ||||||  | |||||||||||||    
T  28525489 gactaatccggctcgtgcgtagaggcatgcgcactggccaagtgttgtttccccctggaaatcgaa 28525554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 146 - 271
Target Start/End: Complemental strand, 34356275 - 34356149
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    ||||||||||| ||| || | ||||||||| || ||||  ||||||| || |||||||||||| | | ||| |||  ||||||| ||||||  || || |    
T  34356275 taatccggctcatgcatagaggcatgcgcactgaccaagtgttgttccccctggaaatcgaacccggtattccccagatacgtccttggaaatagctcct 34356176  T
Q  245 tgccactggagctcaatcaacttggtt 271  Q
    |||||||||||| ||| ||||||||||    
T  34356175 tgccactggagcccaaacaacttggtt 34356149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 143 - 256
Target Start/End: Original strand, 39806919 - 39807033
Alignment:
Q  143 gactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||| |||||| ||| | ||||||||| ||||||||||||| ||||| ||| |||||||| | | ||| ||||  |||||| ||| ||||||      
T  39806919 gactaatccgactcgtgtgtagaggcatgcgcactggccaaacgttgtttctcttgggaatcgaacccggtattccccgggtacgtccttgtaaggagca 39807018  T
Q  242 cattgccactggagc 256  Q
      |||||||||||||    
T  39807019 tcttgccactggagc 39807033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 114 - 195
Target Start/End: Complemental strand, 10669693 - 10669612
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc 195  Q
    ||||||||| |||| |||||||| |   ||| ||||||| |||||||||| |  |||||||| ||||||| |||||||||||    
T  10669693 caccggtttccgacccaccaaaggtgaacgattaatccgactcgtgcgtagagacatgcgcactggccaagcgttgttctcc 10669612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #51
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 23500795 - 23500844
Alignment:
Q  222 atacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||||||||||||||| || ||||||| ||||| ||| ||||||||||    
T  23500795 atacgtctttggaaggagctccttgccaccggagcccaaacaacttggtt 23500844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #52
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 117 - 204
Target Start/End: Complemental strand, 26805394 - 26805306
Alignment:
Q  117 cggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcg 204  Q
    ||||||||||  |||||||| |  |||||||||||| ||| |||||| | ||||| ||| ||||||||||| | |||||||| ||||||    
T  26805394 cggttttcgagccaccaaaggtgggcgactaatccgactcatgcgtagaggcatgtgcactggccaaacgtcgtttctcctgaaaatcg 26805306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 54; Significance: 1e-21; HSPs: 47)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 54; E-Value: 1e-21
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 9168286 - 9168414
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    ||||||||||||||| |||||| | | ||||||| ||||||| ||||||||  |||| |||||  ||| | ||| |||| |||||||||||||||||| |    
T  9168286 cgactaatccggctcatgcgtagaggtatgcgcactggccaagcgttgttcctctgggaatcgttctcggtattccccggatacgtctttggaaggag-t 9168384  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||||||| ||||||||||    
T  9168385 ccttgccactggagctcaagcaacttggtt 9168414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 52; E-Value: 2e-20
Query Start/End: Original strand, 144 - 271
Target Start/End: Original strand, 38897754 - 38897881
Alignment:
Q  144 actaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttca 243  Q
    |||||||||||||||||||| | ||||||||| ||||||| |||||||| |||||||||||||| | | ||| |||  ||||||| ||| || ||| ||     
T  38897754 actaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttcccctggaaatcgaacccggtattccccatatacgtccttgtaaagagctcc 38897853  T
Q  244 ttgccactggagctcaatcaacttggtt 271  Q
    |||||||| ||| |||| ||||||||||    
T  38897854 ttgccacttgagttcaagcaacttggtt 38897881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 1538539 - 1538375
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||| | |   ||| ||||||||||| |||||| | ||||||||| |||||||  ||||||| || ||| |||||||    
T  1538539 ctttcgcaccggtttccgacccaccaatggtggacgattaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaa 1538440  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| |||||||||||| | |||||||| || ||||||||||||| ||| ||||||||||    
T  1538439 cccggtattccccgaatacgtcctcggaaggagctccttgccactggagcccaaacaacttggtt 1538375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 108 - 271
Target Start/End: Original strand, 5731919 - 5732083
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| ||| |||| |   ||||||||| ||||| | |||| | ||||||||| ||||||| |||||||| |||||| |||||||    
T  5731919 ctttcgcaccggtttccgacccactaaaggtgaacgactaatctggctcatacgtagaggcatgcgcactggccaagcgttgttcctcctgggaatcgaa 5732018  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  5732019 cccggtattccccgggtacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 5732083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 142 - 272
Target Start/End: Complemental strand, 19572798 - 19572667
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| |||||||  ||||||| || ||| |||| ||| | | ||| |||| ||||||| ||||||||||     
T  19572798 cgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatctaacccggtattccccggatacgtccttggaaggagc 19572699  T
Q  241 tcattgccactggagctcaatcaacttggttc 272  Q
    || ||||||||||||| ||| |||||||||||    
T  19572698 tccttgccactggagcccaagcaacttggttc 19572667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 106 - 256
Target Start/End: Original strand, 25417180 - 25417331
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcg 204  Q
    ||||||| |||||||||  ||| |||||| | ||   |||||||||||||||| |||| | ||||||||| ||||||| ||||||| | ||||| |||||    
T  25417180 ttctttcgcaccggtttctgacccaccaatggtaaatgactaatccggctcgttcgtagaggcatgcgcactggccaagcgttgttccccctgggaatcg 25417279  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccactggagc 256  Q
    ||| | | ||| ||||| |||||| |||||||||| || |||||||||||||    
T  25417280 aacccggtattccccgagtacgtccttggaaggagctccttgccactggagc 25417331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 37263314 - 37263185
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||||||||||||||| | ||||||||| ||||||| |||||||| ||||  |||||||| |   ||| ||||  |||||| || ||||||  |    
T  37263314 cgactaatccggctcgtgcgtagaggcatgcgcattggccaagcgttgttcccctgagaatcgaacccgatattccccgggtacgtccttagaaggaact 37263215  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||| ||| ||||||||||    
T  37263214 ccttgccactggagcccaagcaacttggtt 37263185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 142 - 271
Target Start/End: Original strand, 41163493 - 41163622
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||||| |||| |||||| |  |||| ||| |||||||||||||||| ||||| |||||||| | | ||| ||||  |||||  |||||||||| |    
T  41163493 cgactaatccagctcatgcgtagagacatgtgcactggccaaacgttgttcccctgggaatcgaacccggtattccccgggtacgttcttggaaggagct 41163592  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | ||||||||||||| ||| ||||||||||    
T  41163593 ccttgccactggagcccaaacaacttggtt 41163622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 9812980 - 9812816
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||  ||| |||||||| |  ||||||||||||| || |||||| | |||||| || ||||||| ||||||| ||||| | |||||||    
T  9812980 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggccaagcgttgttcctcctcggaatcgaa 9812881  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||||||| || ||||||||||||  ||| ||||||||||    
T  9812880 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 9812816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 42086435 - 42086271
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |   ||||||||||||||| |||||| | ||||||||| ||| ||| ||||||| | ||||| |||||||    
T  42086435 ctttcgcaccggtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttgttccccctgggaatcgaa 42086336  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| | ||  |||||| |||||||||| || ||||||| ||||| ||| ||||||||||    
T  42086335 cccggtattcctcgggtacgtccttggaaggagctccttgccaccggagcccaagcaacttggtt 42086271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 108 - 238
Target Start/End: Complemental strand, 12082016 - 12081885
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||||||||| ||| |||| |||||||| |   |||||||| ||||||||||||| ||||||||||| ||||||| ||||||| | ||||  |||||||    
T  12082016 ctttcacaccgatttccgactcaccaaaggtggacgactaattcggctcgtgcgtagatgcatgcgcactggccaagcgttgttccccctgagaatcgaa 12081917  T
Q  207 ctcagcatttcccgaatacgtctttggaagga 238  Q
    | ||| ||| |||| ||||||| || ||||||    
T  12081916 cccagtattccccggatacgtcctttgaagga 12081885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000002
Query Start/End: Original strand, 114 - 271
Target Start/End: Original strand, 3653919 - 3654075
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagca 213  Q
    |||||||||||||  |||||||| |   ||||||||||| |||||||||| | ||||||||| ||| ||| ||||||||| || | |||||||| | | |    
T  3653919 caccggttttcgatccaccaaaggtggacgactaatccgcctcgtgcgtagaggcatgcgcactggtcaagcgttgttct-ctaggaatcgaacccggta 3654017  T
Q  214 tttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||  |||  |||||| |||||| ||| |||||| ||||||||| ||| ||||||||||    
T  3654018 ttctccgggtacgtccttggaaagagctcattgtcactggagcccaaacaacttggtt 3654075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 5079438 - 5079275
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||| |||||||| |  ||||||||||||||||||||||| | ||||||||| || |||| || |||| | |||||||||| |     
T  5079438 ctttcgcaccggttttcgac-caccaaaggtgggcgactaatccggctcgtgcgtagaagcatgcgcattgaccaagcgctgttccccctggaaatcaac 5079340  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| | || ||||||  |||||||||| || ||||||| ||| | ||| ||||||||||    
T  5079339 cccggtattccacggatacgtgcttggaaggagctctttgccaccggaacccaaacaacttggtt 5079275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 12705122 - 12704958
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc-tcctggaaatcgaa 206  Q
    ||||| |||||||||  ||| |||||||| |  ||||||||||||| || |||||| | |||||| || ||| ||| |||||||| |||| | |||||||    
T  12705122 ctttcgcaccggtttctgacccaccaaaggtgggcgactaatccggttcatgcgtagaagcatgcacactggtcaagcgttgttcctcctcggaatcgaa 12705023  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    | | | ||| ||||  |||||| |||||||||| || ||||||||||||  ||| ||||||||||    
T  12705022 cccggtattccccgggtacgtccttggaaggagctccttgccactggagtccaaacaacttggtt 12704958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 132 - 271
Target Start/End: Complemental strand, 26077225 - 26077085
Alignment:
Q  132 caaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctt 230  Q
    |||||||  |||| ||||| |||||||||||| | ||||| ||| ||||||| |||||||| | |||| ||||||||  || ||| ||| |||||||| |    
T  26077225 caaagatgagcgattaatctggctcgtgcgtagaggcatgtgcactggccaagcgttgttccctctgggaatcgaacctagtattccccaaatacgtcct 26077126  T
Q  231 tggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||| ||| || || |||||||||| ||| ||||||||||    
T  26077125 tggaatgagctccttaccactggagcccaaacaacttggtt 26077085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 7866656 - 7866525
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    ||||||||||||| ||||||||| | |||||| || ||||||| ||||||| ||||| | |||||||| | | ||| | ||  |||||| ||||||||||    
T  7866656 gcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttcctcctcggaatcgaacccggtattcctcgggtacgtccttggaaggag 7866557  T
Q  240 ttcattgccactggagctcaatcaacttggtt 271  Q
     || ||||||||||||  ||| ||||||||||    
T  7866556 ctccttgccactggagtccaagcaacttggtt 7866525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 108 - 230
Target Start/End: Complemental strand, 40117523 - 40117400
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||  |||||||| |   ||| ||||||||||| |||||| | ||||||||| ||||||| ||||||| | |||||||||||||    
T  40117523 ctttcgcaccggttttcgatccaccaaaggtgaacgattaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 40117424  T
Q  207 ctcagcatttcccgaatacgtctt 230  Q
     ||   ||| ||||||||||||||    
T  40117423 ttcgatattccccgaatacgtctt 40117400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 114 - 191
Target Start/End: Original strand, 6764462 - 6764539
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt 191  Q
    |||| |||| |||| || |||||||| ||||||||||||||||||||||| | ||||||||| | ||||||| |||||    
T  6764462 caccagtttccgacccaacaaagataggcgactaatccggctcgtgcgtagaggcatgcgcactagccaaacattgtt 6764539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 108 - 272
Target Start/End: Complemental strand, 8513627 - 8513462
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttg-ttctcctggaaatcgaa 206  Q
    ||||| ||||||||| |||| |||||||| |   ||||||||| |||||||||||| | ||||| ||| ||||||| | ||| ||| ||| | |||||||    
T  8513627 ctttcgcaccggtttccgacccaccaaaggtggacgactaatctggctcgtgcgtagaggcatgtgcactggccaagcattgtttcccctaggaatcgaa 8513528  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggttc 272  Q
    | | | ||| ||||  |||||| |||||||||| || |||||||| |||  ||| |||||||||||    
T  8513527 cccggtattccccgggtacgtccttggaaggagctccttgccacttgagtccaagcaacttggttc 8513462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 168 - 271
Target Start/End: Complemental strand, 16755109 - 16755005
Alignment:
Q  168 catgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaact 266  Q
    |||||||| |||||||  |||||| |||||| ||||||||| ||| ||| |||| |||||||||||||| ||| || ||||||||| ||| |||  ||||    
T  16755109 catgcgcactggccaagtgttgtttctcctgaaaatcgaacccagtattccccggatacgtctttggaaagagctccttgccactgaagcccaaggaact 16755010  T
Q  267 tggtt 271  Q
    |||||    
T  16755009 tggtt 16755005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 217 - 261
Target Start/End: Complemental strand, 28862823 - 28862779
Alignment:
Q  217 cccgaatacgtctttggaaggagttcattgccactggagctcaat 261  Q
    ||||||||||||||||||||||| || ||||||||||||||||||    
T  28862823 cccgaatacgtctttggaaggagctccttgccactggagctcaat 28862779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 196 - 255
Target Start/End: Complemental strand, 18327789 - 18327730
Alignment:
Q  196 tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggag 255  Q
    |||||||||||| ||| |||||| ||||||||| |||||||||| || ||||||||||||    
T  18327789 tggaaatcgaacccagtatttcctgaatacgtccttggaaggagctccttgccactggag 18327730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 20682654 - 20682781
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaa-ggagttca 243  Q
    |||||||||||||||||| | ||||||||| ||||||| ||||||| | |||||||||| ||| ||  ||| ||||  |||||| || ||| |||| ||     
T  20682654 taatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatctaacccaatattccccgggtacgtccttagaatggagctcc 20682753  T
Q  244 ttgccactggagctcaatcaacttggtt 271  Q
    ||| ||||||||| ||| ||||||||||    
T  20682754 ttgtcactggagcccaagcaacttggtt 20682781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 114 - 201
Target Start/End: Original strand, 24463891 - 24463978
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaa 201  Q
    |||||||||||||| ||  |||| |  |||||||||||||||||||| || | ||||||||| ||||||| |||||||| ||| ||||    
T  24463891 caccggttttcgacccagtaaaggtgggcgactaatccggctcgtgcatagaggcatgcgcactggccaatcgttgttcgccttgaaa 24463978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 251
Target Start/End: Original strand, 11845798 - 11845944
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcg 204  Q
    ||||||||||||||||| | || || ||||| |  |||| |||| |||||| | |||| | ||||||||| ||||||||||||||| | ||| |||||||    
T  11845798 ttctttcacaccggtttccaacccatcaaaggtgggcgattaattcggctcatacgtagaggcatgcgcactggccaaacgttgttccccctcgaaatcg 11845897  T
Q  205 aactcagcatttcccgaatacgtctttggaaggagttcattgccact 251  Q
    ||| |   ||||| ||  |||||| |||||||||| || ||||||||    
T  11845898 aacccgatatttctcgggtacgtccttggaaggagctccttgccact 11845944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 207
Target Start/End: Original strand, 14588614 - 14588716
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcg 204  Q
    ||||||| |||||||||||| | |||||||| |   ||||||||||||||| |||||| | ||||||||| ||| ||| |||| || |||||| ||||||    
T  14588614 ttctttcgcaccggttttcggctcaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggtcaagcgttattcctcctgaaaatcg 14588713  T
Q  205 aac 207  Q
    |||    
T  14588714 aac 14588716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 146 - 271
Target Start/End: Original strand, 18136317 - 18136443
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcat 244  Q
    ||||||||||| || ||| | |||||| || || ||||  ||||||| || ||| |||||||| | | |||  ||| |||||||||||||||||| || |    
T  18136317 taatccggctcatgtgtagaggcatgcacactgaccaagtgttgttccccctgggaatcgaacccggtattctccggatacgtctttggaaggagctcct 18136416  T
Q  245 tgccactggagctcaatcaacttggtt 271  Q
    |||||||||||| ||| ||||||||||    
T  18136417 tgccactggagcccaaacaacttggtt 18136443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 20525912 - 20525782
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttct-cctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||||||||| |||||| | ||||||||| |||| ||  |||||||  ||||| |||||||| |   ||| |||| |||| || ||| ||||||     
T  20525912 cgactaatccggctcatgcgtagaggcatgcgcactggcgaagtgttgttccacctgggaatcgaacccgatattccccggatacatccttgaaaggagc 20525813  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  20525812 tccttgccactggagcccaagcaacttggtt 20525782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 150 - 271
Target Start/End: Complemental strand, 28857194 - 28857072
Alignment:
Q  150 ccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgcc 248  Q
    ||||||| |||||| | ||||||||| |||||||  ||||||| || ||| |||||||| | | ||| ||||  | |||| |||||||||| || |||||    
T  28857194 ccggctcatgcgtagaggcatgcgcactggccaagtgttgttccccctgggaatcgaacccggtattccccgggtgcgtccttggaaggagctccttgcc 28857095  T
Q  249 actggagctcaatcaacttggtt 271  Q
    |||||||| ||| ||||||||||    
T  28857094 actggagcccaagcaacttggtt 28857072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 155 - 271
Target Start/End: Original strand, 35403558 - 35403675
Alignment:
Q  155 tcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactgg 253  Q
    ||||||||| |  |||||||| ||||||| |||||||| ||   | |||||||| | | ||||||||| |||||| |||||||||| || ||||||||||    
T  35403558 tcgtgcgtagagacatgcgcattggccaagcgttgttcccccttagaatcgaacccggtatttcccgagtacgtccttggaaggagctccttgccactgg 35403657  T
Q  254 agctcaatcaacttggtt 271  Q
    ||| ||| ||| ||||||    
T  35403658 agcccaaacaagttggtt 35403675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 9805112 - 9805028
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| |||| |||| |||| |||||||| |   ||||||||||||||| |||||| | ||||||||| ||||||| ||||||||    
T  9805112 ctttcgcacctgtttccgacccaccaaaggtggacgactaatccggctcatgcgtagaggcatgcgcactggccaagcgttgttc 9805028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 141 - 276
Target Start/End: Original strand, 35561850 - 35561986
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctc-ctggaaatcgaactcagcatttcccgaatacgtctttggaaggag 239  Q
    |||||||||| ||||| || ||| | ||||||||| ||| ||   ||||||| | |||||| ||||||||   ||| |||| ||||||| ||||||||||    
T  35561850 gcgactaatctggctcatgtgtagaggcatgcgcactggtcaggtgttgttccctctggaagtcgaactcgatattccccggatacgtcattggaaggag 35561949  T
Q  240 ttcattgccactggagctcaatcaacttggttcatat 276  Q
     || ||||||||||||  ||| |||||||||| ||||    
T  35561950 ctctttgccactggagtccaagcaacttggttaatat 35561986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 41801085 - 41801001
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||||||| ||| |||| || |||||||   |||||||||||||||||||||| |  |||||||| ||| ||| ||||||||    
T  41801085 ctttcacaccgctttccgacccatcaaagatgaacgactaatccggctcgtgcgtagagacatgcgcattggtcaagcgttgttc 41801001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 271
Target Start/End: Complemental strand, 2485304 - 2485141
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaac 207  Q
    ||||| || |||||| |||| || ||||| |  |||||||||||| ||| | |||| | |||||||||  |||| |  ||||||| ||| | ||||||||    
T  2485304 ctttcgcatcggtttccgacccatcaaaggtgagcgactaatccgactcatacgtagaggcatgcgcacaggcccagggttgttcccctaggaatcgaac 2485205  T
Q  208 tcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
     ||| ||| || ||||||||| |||||| ||| || |||||| |||||  ||| ||||||||||    
T  2485204 ccagtattccctgaatacgtccttggaatgagctccttgccattggagtccaaacaacttggtt 2485141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 109 - 209
Target Start/End: Complemental strand, 21487721 - 21487623
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaac 207  Q
    |||| |||||||||||||| ||  |||| |  |||||||||||||||||||   | | ||||||||| | ||||||||||||| |||||| |||||||||    
T  21487721 tttcgcaccggttttcgacccattaaaggtgggcgactaatccggctcgtg---agaggcatgcgcactagccaaacgttgttcctcctgaaaatcgaac 21487625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 129 - 192
Target Start/End: Complemental strand, 30995208 - 30995145
Alignment:
Q  129 caccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||||||  ||||||||||||||||||||||| | ||||||||  |||||||  |||||||    
T  30995208 caccaaagatgagcgactaatccggctcgtgcgtagaggcatgcgccctggccaagtgttgttc 30995145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 217 - 271
Target Start/End: Complemental strand, 1826855 - 1826801
Alignment:
Q  217 cccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||| ||||||||||||||||| ||||||| |||| ||| ||| ||||||||||    
T  1826855 cccgagtacgtctttggaaggagctcattgctactgaagcccaaacaacttggtt 1826801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 30349653 - 30349523
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||| | |||| ||| || | ||||||||| ||||||| | |||||| || | |||||| ||| | | ||| |||| ||||||| |||||||||      
T  30349653 cgactaattcagctcatgcatagaggcatgcgcactggccaatcattgttccccctagaaatcaaacccggtattccccggatacgtccttggaaggaac 30349554  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || ||||||||||||| ||| ||||||||||    
T  30349553 tccttgccactggagcccaaacaacttggtt 30349523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 114 - 192
Target Start/End: Original strand, 39099784 - 39099862
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||||||| |||| |||||||| |  |||||||||||||||| |||||| | ||||| ||| |||||||  |||||||    
T  39099784 caccggtttccgacccaccaaaggtgggcgactaatccggctcatgcgtagaggcatgtgcactggccaagtgttgttc 39099862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 31; E-Value: 0.00000006
Query Start/End: Original strand, 142 - 192
Target Start/End: Original strand, 42291538 - 42291588
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    |||||||||||||||||||||| | ||||| ||| ||||||| ||||||||    
T  42291538 cgactaatccggctcgtgcgtagaggcatgtgcactggccaagcgttgttc 42291588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 118 - 271
Target Start/End: Original strand, 18294493 - 18294646
Alignment:
Q  118 ggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttc 217  Q
    ||||| |||| ||||||||||  |||| |||||||| || || ||| | | ||||||| || |||| |||||||| |||||| || |||| | | |||      
T  18294493 ggtttccgacccaccaaagatgggcgattaatccggttcatgtgtagaggtatgcgcactgaccaagcgttgttcccctggatattgaacccggtattct 18294592  T
Q  218 ccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||| || ||| ||||||||||||| ||| ||||| ||  ||| ||||||||||    
T  18294593 ccgagtatgtccttggaaggagttccttgtcactgaagtccaaacaacttggtt 18294646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Complemental strand, 23383641 - 23383592
Alignment:
Q  222 atacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  23383641 atacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 23383592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 146 - 195
Target Start/End: Complemental strand, 24875415 - 24875366
Alignment:
Q  146 taatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc 195  Q
    |||||||||||||||||| |  |||||||| ||| |||||||||||||||    
T  24875415 taatccggctcgtgcgtagagacatgcgcactggtcaaacgttgttctcc 24875366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 141 - 202
Target Start/End: Complemental strand, 25453000 - 25452939
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaat 202  Q
    ||||||||||||||||||||||| | |||||| || ||| ||||| |||||| |||| ||||    
T  25453000 gcgactaatccggctcgtgcgtagaggcatgcacactggtcaaacattgttcccctgaaaat 25452939  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 142 - 242
Target Start/End: Original strand, 35638066 - 35638167
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    ||||||||| | |||||||||| | | |||| || || |||||||||||| |||||| |||||||| |||  ||| ||| ||||||||  ||||||||||    
T  35638066 cgactaatctgactcgtgcgtagaggtatgcacactgaccaaacgttgttcctcctgaaaatcgaattcaatattccccaaatacgtccctggaaggagt 35638165  T
Q  241 tc 242  Q
    ||    
T  35638166 tc 35638167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 223 - 271
Target Start/End: Original strand, 6767166 - 6767214
Alignment:
Q  223 tacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    |||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  6767166 tacgtccttggaaggagctccttgccactggagcccaagcaacttggtt 6767214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 13664368 - 13664284
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| ||||||||| ||||||||||||| |   ||| ||||| ||||| |||||| | ||||||||| |||||||  |||||||    
T  13664368 ctttcgcaccggtttccgacacaccaaaggtgatcgattaatctggctcatgcgtagaggcatgcgcactggccaagtgttgttc 13664284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 49; Significance: 1e-18; HSPs: 1)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 49; E-Value: 1e-18
Query Start/End: Original strand, 114 - 271
Target Start/End: Complemental strand, 68618 - 68463
Alignment:
Q  114 caccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagc 212  Q
    |||||||||||||| |||||||| |  ||||||||||||||||||||||| | |||||||||    |||| ||||||| | ||||| |||||||| |       
T  68618 caccggttttcgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgca---cccaagcgttgttccccctgggaatcgaacccgat 68522  T
Q  213 atttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||||  |||||| |||||||||| || |||||||| |||| ||| ||||||||||    
T  68521 atttcccgggtacgtccttggaaggagctccttgccactagagcccaaacaacttggtt 68463  T

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Target: scaffold0029 (Bit Score: 46; Significance: 6e-17; HSPs: 1)
Name: scaffold0029
Description:

Target: scaffold0029; HSP #1
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 115 - 271
Target Start/End: Complemental strand, 41147 - 40990
Alignment:
Q  115 accggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctgga-aatcgaactcagca 213  Q
    |||||||| |||| ||||||||||  ||||||||||||||||||||||| | |||||| || || ||||  ||||||| ||| || |||||||| |   |    
T  41147 accggtttccgactcaccaaagatgggcgactaatccggctcgtgcgtagaggcatgcacactgaccaagtgttgttccccttgagaatcgaacccgata 41048  T
Q  214 tttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    || || || ||||||  ||||||||| || ||||||||||||| ||| ||||||||||    
T  41047 ttccctgagtacgtccatggaaggagctccttgccactggagcccaaacaacttggtt 40990  T

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Target: scaffold0004 (Bit Score: 41; Significance: 0.00000000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 41; E-Value: 0.00000000000006
Query Start/End: Original strand, 141 - 265
Target Start/End: Original strand, 95013 - 95136
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||| |||||||| ||||||||| ||| ||||||||||| |||| ||||||||||   | ||| |||| |||| |  ||||||||||     
T  95013 gcgactaatccggctcatgcgtaaaggcatgcgcactggtcaaacgttgtt-tcctagaaatcgaacctggtattccccggatactttcttggaaggagc 95111  T
Q  241 tcattgccactggagctcaatcaac 265  Q
    || |||||| |||||| ||| ||||    
T  95112 tccttgccattggagcccaagcaac 95136  T

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Target: scaffold0011 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 2)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 109 - 268
Target Start/End: Complemental strand, 186626 - 186467
Alignment:
Q  109 tttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaact 208  Q
    |||||||||||||| |||| ||| ||||||   |||||||||||||||||||||| | ||||| ||| || |||||| || ||||||  ||||||||||     
T  186626 tttcacaccggtttccgacccactaaagatgaacgactaatccggctcgtgcgtagaggcatgtgcactgaccaaacattattctccctgaaatcgaacc 186527  T
Q  209 cagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaacttg 268  Q
    |   |||  || ||||| || || ||||| | || |||||||| |||||||| |||||||    
T  186526 cgatattctccaaatacatccttagaaggtgctccttgccactagagctcaaccaacttg 186467  T

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Target: scaffold0011; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 163
Target Start/End: Complemental strand, 224427 - 224372
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgta 163  Q
    ||||| ||||||||| |||| ||||||||||   ||||||||||||||||||||||    
T  224427 ctttcgcaccggtttccgacccaccaaagatggacgactaatccggctcgtgcgta 224372  T

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Target: scaffold0209 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0209
Description:

Target: scaffold0209; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 141 - 271
Target Start/End: Complemental strand, 12650 - 12521
Alignment:
Q  141 gcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||| ||| |||||| | ||||||||| ||| ||| |||||||| ||| | |||||||| | | ||||| ||| |||||| ||||||| ||     
T  12650 gcgactaatccgactcatgcgtagaggcatgcgcactggtcaagcgttgttc-cctaggaatcgaacccggtatttctcgagtacgtccttggaagtagc 12552  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    || |||||||| |||| ||| ||||||||||    
T  12551 tccttgccactagagcccaaacaacttggtt 12521  T

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Target: scaffold0086 (Bit Score: 39; Significance: 0.0000000000009; HSPs: 1)
Name: scaffold0086
Description:

Target: scaffold0086; HSP #1
Raw Score: 39; E-Value: 0.0000000000009
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 26259 - 26129
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagt 240  Q
    |||||||||||||||||||||| | |||||| || ||||||| ||||||| | |||||||||||||| ||| ||| |||   || ||| || ||||||||    
T  26259 cgactaatccggctcgtgcgtagaggcatgcacactggccaagcgttgttccccctggaaatcgaacccagtattccccaggtatgtccttagaaggagt 26160  T
Q  241 tcattgccactggagctcaatcaacttggtt 271  Q
    |  |||||||| |||  ||| ||||||||||    
T  26159 ttcttgccactagagtccaagcaacttggtt 26129  T

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Target: scaffold0170 (Bit Score: 38; Significance: 0.000000000004; HSPs: 1)
Name: scaffold0170
Description:

Target: scaffold0170; HSP #1
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 142 - 206
Target Start/End: Complemental strand, 9921 - 9856
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    |||||||||||||||||||||| | ||||||||| ||||||| ||||||| | |||||||||||||    
T  9921 cgactaatccggctcgtgcgtagaggcatgcgcactggccaagcgttgttccccctggaaatcgaa 9856  T

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Target: scaffold0316 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0316
Description:

Target: scaffold0316; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 207
Target Start/End: Original strand, 1613 - 1713
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgtt-ctcctggaaatcgaa 206  Q
    ||||| |||||||||||||| |||||||| |  |||||||||  ||||| |||||| | ||||||||| |||| || ||||||| | |||||||||||||    
T  1613 ctttcgcaccggttttcgacccaccaaaggtgggcgactaatttggctcatgcgtagaggcatgcgcactggctaatcgttgttccccctggaaatcgaa 1712  T
Q  207 c 207  Q
    |    
T  1713 c 1713  T

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Target: scaffold0291 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0291
Description:

Target: scaffold0291; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 6965 - 6881
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||||||||| |||||| | ||||||||| |||||||  |||||||    
T  6965 ctttcgcaccggtttccgacccaccaaaggtgagcgactaatccggctcatgcgtagaggcatgcgcactggccaagtgttgttc 6881  T

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Target: scaffold0010 (Bit Score: 37; Significance: 0.00000000001; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 108 - 192
Target Start/End: Original strand, 155710 - 155794
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| |||||| || |||| |||||||| |  ||||||||||||||||||||||| | ||||||||| | ||||| ||||||||    
T  155710 ctttcgcaccggcttccgacccaccaaaggtgggcgactaatccggctcgtgcgtagaggcatgcgcactagccaagcgttgttc 155794  T

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Target: scaffold0010; HSP #2
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 168 - 271
Target Start/End: Original strand, 25843 - 25947
Alignment:
Q  168 catgcgcaatggccaaacgttgttct-cctggaaatcgaactcagcatttcccgaatacgtctttggaaggagttcattgccactggagctcaatcaact 266  Q
    |||||||| ||||||| ||||||||| ||| | ||||||||   | ||| ||||| |||||  |||||||||| || |||| |||||||| ||| |||||    
T  25843 catgcgcactggccaagcgttgttctccctaggaatcgaaccttgtattccccgagtacgtacttggaaggagctctttgctactggagcccaaacaact 25942  T
Q  267 tggtt 271  Q
    |||||    
T  25943 tggtt 25947  T

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Target: scaffold0005 (Bit Score: 36; Significance: 0.00000000006; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 36; E-Value: 0.00000000006
Query Start/End: Original strand, 106 - 185
Target Start/End: Original strand, 250022 - 250101
Alignment:
Q  106 ttctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaac 185  Q
    ||||||| ||||| ||| |||| ||||||||    ||||||||||||||||||||||| | ||||||||| |||||||||    
T  250022 ttctttcgcaccgatttccgacccaccaaaggcgagcgactaatccggctcgtgcgtagaggcatgcgcactggccaaac 250101  T

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Target: scaffold0384 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0384
Description:

Target: scaffold0384; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 142 - 271
Target Start/End: Complemental strand, 6048 - 5919
Alignment:
Q  142 cgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcctggaaatcgaactcagcatttcccgaatacgtctttggaaggagtt 241  Q
    |||||||| || ||| |||||| | ||||| ||| ||||||| |||||| | |||||||||||||| ||| ||| ||||  |||| | ||| |||||| |    
T  6048 cgactaattcgtctcatgcgtagaggcatgtgcactggccaagcgttgtccccctggaaatcgaacccagtattccccgggtacgcccttgaaaggagct 5949  T
Q  242 cattgccactggagctcaatcaacttggtt 271  Q
    | |||||||| || | ||| ||||||||||    
T  5948 ccttgccactagaacccaagcaacttggtt 5919  T

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Target: scaffold0002 (Bit Score: 34; Significance: 0.0000000009; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 34; E-Value: 0.0000000009
Query Start/End: Original strand, 108 - 256
Target Start/End: Complemental strand, 319532 - 319383
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc-tggaaatcgaa 206  Q
    ||||| ||||||||| || | |||||||| |   |||||||||| |||| ||| || | | ||||||| ||||||| |||||||| || | |||||| ||    
T  319532 ctttcgcaccggtttccgccccaccaaaggtggacgactaatccagctcatgcatagagggatgcgcactggccaagcgttgttccccctagaaatcaaa 319433  T
Q  207 ctcagcatttcccgaatacgtctttggaaggagttcattgccactggagc 256  Q
    | | | ||| |||| ||||||| |||||||||| || |||||||||||||    
T  319432 cccggtattccccggatacgtccttggaaggagctccttgccactggagc 319383  T

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Target: scaffold0009 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 108 - 195
Target Start/End: Original strand, 42831 - 42918
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttctcc 195  Q
    ||||| ||||||||| |||| |||||||| |  |||||||||||||||| || ||| | ||||||||| || |||| | |||||||||    
T  42831 ctttcgcaccggtttccgacccaccaaaggtgggcgactaatccggctcatgtgtagaggcatgcgcactgaccaagcattgttctcc 42918  T

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Target: scaffold0016 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 222 - 271
Target Start/End: Original strand, 8824 - 8873
Alignment:
Q  222 atacgtctttggaaggagttcattgccactggagctcaatcaacttggtt 271  Q
    ||||||| |||||||||| || ||||||||||||| ||| ||||||||||    
T  8824 atacgtccttggaaggagctccttgccactggagcccaaacaacttggtt 8873  T

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Target: scaffold0376 (Bit Score: 29; Significance: 0.0000009; HSPs: 1)
Name: scaffold0376
Description:

Target: scaffold0376; HSP #1
Raw Score: 29; E-Value: 0.0000009
Query Start/End: Original strand, 108 - 192
Target Start/End: Complemental strand, 12780 - 12696
Alignment:
Q  108 ctttcacaccggttttcgacacaccaaagatatgcgactaatccggctcgtgcgtaaatgcatgcgcaatggccaaacgttgttc 192  Q
    ||||| |||||||||  ||| || ||||| |  ||||||||||||| ||||||||| | |||||| || ||||||| ||||||||    
T  12780 ctttcgcaccggtttctgacccatcaaaggtgggcgactaatccggttcgtgcgtagaggcatgcacactggccaagcgttgttc 12696  T

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